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"subject": "GROK-18695: npm dependency VEX scanning + remediation to zero (#3904)",
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"body": "GROK-18695: npm dependency VEX scanning + remediation to zero (#3904)\n\n* GROK-18695: CI: npm audit of published package production deps -> public VEX (vex/npm/*)\n\nPublish-time scan in packages.yaml (report-only, after npm publish):\n.github/scripts/npm-audit-vex.sh audits the workspace lockfile\n(--omit=dev) and publishes OpenVEX + CSV + HTML + meta to\ns3://datagrok-data/vex/npm/<safe>/, then the existing REINDEX trigger\nfolds it into the index. Weekly counterpart lives in the reddata repo\n(Vulnerability-Scan npm pass). security.md documents the npm VEX\nsurface and the production-dependencies-only policy.\n\nCo-Authored-By: Claude Fable 5 <noreply@anthropic.com>\n\n* GROK-18695: npm dependency remediation: production audit to zero across all packages and libraries\n\n629 production-tree findings (13 critical / 276 high / 239 moderate /\n101 low, npm audit --omit=dev) -> 0 across all 101 package/library\ndirs. What was done:\n\n- Lockfile refresh (npm audit fix) everywhere for semver-compatible\n advisories (ws, @babel/core, minimatch, fast-uri, form-data, ...).\n- uuid < 11.1.1 (GHSA-w5hq-g745-h8pq), pinned via exceljs@4 /\n aws-sdk@2 / published library chains: direct deps bumped to ^11.1.1\n + \"overrides\": {\"uuid\": \"^11.1.1\"} in every affected package\n (plugins bundle their tree, so the override is the shipped fix).\n- Charts: echarts 5 -> 6.1.0 (XSS GHSA-fgmj-fm8m-jvvx has no 5.x fix);\n d3-color >= 3.1.0 forced under circos. Build verified, no code changes.\n- Notebooks: kept JupyterLab 2.x, pinned vulnerable leaves via overrides\n (url-parse, marked 4 + default-export shim, sanitize-html 2, codemirror).\n- BiostructureViewer: d3 ^7.9, saguaro ^2.5.13, uuid ^11.1.1; molstar\n gl->node-gyp chain (9 criticals) cleared via node-gyp ^11 override;\n graphql-codegen leaf overrides.\n- NLP: AWS Translate migrated aws-sdk v2 -> @aws-sdk/client-translate v3\n (v2 advisory GHSA-j965-2qgj-vjmq has no patched version); protobufjs\n ^7.6.5 override for the onnx chain.\n- FileEditors: pdfjs-dist ^4.2.67 (arbitrary JS execution on open).\n- Excalidraw ^0.18.1, PhyloTreeViewer deck.gl ^8.9.36, GenomeBrowser,\n Grokky, nmrium (vite-plugin-pwa -> devDeps): all to zero.\n- Minitab/Tableau: package-lock.json generated (were unscannable).\n- Patch version bumps (Charts: minor) on the 33 publishable dirs whose\n manifests changed, so CI republishes and the public VEX npm table\n (data.datagrok.ai/vex) drains to zero.\n\nCo-Authored-By: Claude Fable 5 <noreply@anthropic.com>\n\n* GitHub Actions: Update libraries/webcomponents-vue/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/dock-spawn-dg/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/webcomponents/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/ml/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/statistics/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/arrow/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/math/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/compute-api/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/bio/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/utils/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/gridext/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/sci-comp/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/tutorials/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/db-explorer/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/compute-utils/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update packages/Compute2/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/Compute/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/GenomeBrowser/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/Excalidraw/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/MetabolicGraph/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/MolTrack/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/Notebooks/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/GIS/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/Arrow/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/MLFlow/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/CruddyDemo/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/BioNeMo/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/PowerGrid/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/TensorFlow.js/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/nmrium/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/WebComponents/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/monomerDB/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/Widgets/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/LibTests/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/Tableau/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/Curves/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/EDA/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/UITests/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/NLP/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/Proteomics/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/DBTests/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n---------\n\nCo-authored-by: Claude Fable 5 <noreply@anthropic.com>\nCo-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>",
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"body": "GROK-18695: npm dependency VEX scanning + remediation to zero (#3904)\n\n* GROK-18695: CI: npm audit of published package production deps -> public VEX (vex/npm/*)\n\nPublish-time scan in packages.yaml (report-only, after npm publish):\n.github/scripts/npm-audit-vex.sh audits the workspace lockfile\n(--omit=dev) and publishes OpenVEX + CSV + HTML + meta to\ns3://datagrok-data/vex/npm/<safe>/, then the existing REINDEX trigger\nfolds it into the index. Weekly counterpart lives in the reddata repo\n(Vulnerability-Scan npm pass). security.md documents the npm VEX\nsurface and the production-dependencies-only policy.\n\nCo-Authored-By: Claude Fable 5 <noreply@anthropic.com>\n\n* GROK-18695: npm dependency remediation: production audit to zero across all packages and libraries\n\n629 production-tree findings (13 critical / 276 high / 239 moderate /\n101 low, npm audit --omit=dev) -> 0 across all 101 package/library\ndirs. What was done:\n\n- Lockfile refresh (npm audit fix) everywhere for semver-compatible\n advisories (ws, @babel/core, minimatch, fast-uri, form-data, ...).\n- uuid < 11.1.1 (GHSA-w5hq-g745-h8pq), pinned via exceljs@4 /\n aws-sdk@2 / published library chains: direct deps bumped to ^11.1.1\n + \"overrides\": {\"uuid\": \"^11.1.1\"} in every affected package\n (plugins bundle their tree, so the override is the shipped fix).\n- Charts: echarts 5 -> 6.1.0 (XSS GHSA-fgmj-fm8m-jvvx has no 5.x fix);\n d3-color >= 3.1.0 forced under circos. Build verified, no code changes.\n- Notebooks: kept JupyterLab 2.x, pinned vulnerable leaves via overrides\n (url-parse, marked 4 + default-export shim, sanitize-html 2, codemirror).\n- BiostructureViewer: d3 ^7.9, saguaro ^2.5.13, uuid ^11.1.1; molstar\n gl->node-gyp chain (9 criticals) cleared via node-gyp ^11 override;\n graphql-codegen leaf overrides.\n- NLP: AWS Translate migrated aws-sdk v2 -> @aws-sdk/client-translate v3\n (v2 advisory GHSA-j965-2qgj-vjmq has no patched version); protobufjs\n ^7.6.5 override for the onnx chain.\n- FileEditors: pdfjs-dist ^4.2.67 (arbitrary JS execution on open).\n- Excalidraw ^0.18.1, PhyloTreeViewer deck.gl ^8.9.36, GenomeBrowser,\n Grokky, nmrium (vite-plugin-pwa -> devDeps): all to zero.\n- Minitab/Tableau: package-lock.json generated (were unscannable).\n- Patch version bumps (Charts: minor) on the 33 publishable dirs whose\n manifests changed, so CI republishes and the public VEX npm table\n (data.datagrok.ai/vex) drains to zero.\n\nCo-Authored-By: Claude Fable 5 <noreply@anthropic.com>\n\n* GitHub Actions: Update libraries/webcomponents-vue/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/dock-spawn-dg/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/webcomponents/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/ml/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/statistics/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/arrow/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/math/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/compute-api/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/bio/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/utils/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/gridext/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/sci-comp/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/tutorials/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/db-explorer/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update libraries/compute-utils/package-lock.json\n\n Workflow Libraries 5159\n https://github.com/datagrok-ai/public/actions/runs/29192189405\n\n* GitHub Actions: Update packages/Compute2/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/Compute/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/GenomeBrowser/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/Excalidraw/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/MetabolicGraph/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/MolTrack/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/Notebooks/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/GIS/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/Arrow/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/MLFlow/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/CruddyDemo/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/BioNeMo/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/PowerGrid/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/TensorFlow.js/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/nmrium/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/WebComponents/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/monomerDB/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/Widgets/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/LibTests/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/Tableau/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/Curves/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/EDA/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/UITests/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/NLP/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/Proteomics/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n* GitHub Actions: Update packages/DBTests/package-lock.json\n\n Workflow Packages 10611\n https://github.com/datagrok-ai/public/actions/runs/29192189423\n\n---------\n\nCo-authored-by: Claude Fable 5 <noreply@anthropic.com>\nCo-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>",
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"shortHash": "4bf0c4e",
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"hash": "4bf0c4e3ff8fb3cc81f4291d6aff0aa7936ea221",
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"subject": "Helm: Correct tests",
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"body": "Helm: Correct tests\n",
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"author": {
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"branch": "master"
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}
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@@ -108,8 +108,8 @@
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"stats": {
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"duration": 41.063999999999965,
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"startTime": "2026-08-27T10:17:13.507Z",
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"duration": 39.186000000000035,
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"expected": 0,
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"skipped": 0,
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"unexpected": 0,
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