@datagrok/eda 1.4.10 → 1.4.12

package/icons/pareto-front-viewer.svg

@@ -0,0 +1,15 @@
+<svg width="36" height="36" viewBox="0 0 36 36" fill="none" xmlns="http://www.w3.org/2000/svg">
+<line stroke-linecap="undefined" stroke-linejoin="undefined" id="svg_14" y2="33" x2="4" y1="3" x1="4" stroke="#666666" fill="none"/>
+<line stroke="#666666" stroke-linecap="undefined" stroke-linejoin="undefined" id="svg_15" y2="33" x2="32" y1="33" x1="4" fill="none"/>
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+<ellipse ry="2" rx="2" id="svg_76" cy="27" cx="11" stroke="#b2b2b2" fill="#e5e5e5"/>
+<ellipse ry="2" rx="2" id="svg_77" cy="21" cx="17" stroke="#b2b2b2" fill="#e5e5e5"/>
+<ellipse ry="2" rx="2" id="svg_81" cy="27" cx="21" stroke="#b2b2b2" fill="#e5e5e5"/>
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+<ellipse ry="2" rx="2" id="svg_89" cy="28" cx="29" stroke="#00bf00" fill="#aaffaa"/>
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+<path id="svg_93" d="m-19.82017,1.91858l0.19963,-0.34574l0.34574,-0.19963l0.39926,0l0.34574,0.19963l0.19963,0.34574l0,0.39926l-0.19963,0.34574l-0.34574,0.19963l-0.39926,0l-0.34574,-0.19963l-0.19963,-0.34574l0,-0.39926z" stroke="#00bf00" fill="none"/>
+<path id="svg_94" d="m17.119,45.07648l0.19963,-0.34574l0.34574,-0.19963l0.39926,0l0.34574,0.19963l0.19963,0.34574l0,0.39926l-0.19963,0.34574l-0.34574,0.19963l-0.39926,0l-0.34574,-0.19963l-0.19963,-0.34574l0,-0.39926z" stroke="#00bf00" fill="none"/>
+</svg>

package/package.json

@@ -1,11 +1,12 @@
 {
   "name": "@datagrok/eda",
   "friendlyName": "EDA",
-  "version": "1.4.10",
+  "version": "1.4.12",
   "description": "Exploratory Data Analysis Tools",
   "dependencies": {
     "@datagrok-libraries/math": "^1.2.6",
     "@datagrok-libraries/ml": "^6.10.8",
+    "@datagrok-libraries/statistics": "^1.10.0",
     "@datagrok-libraries/tutorials": "^1.7.4",
     "@datagrok-libraries/utils": "^4.6.5",
     "@keckelt/tsne": "^1.0.2",
@@ -14,6 +15,7 @@
     "datagrok-api": "^1.26.3",
     "dayjs": "^1.11.9",
     "jstat": "^1.9.6",
+    "mathjs": "^15.1.0",
     "source-map-loader": "^4.0.1",
     "umap-js": "^1.3.3",
     "worker-loader": "^3.0.8",

package/src/anova/anova-tools.ts

@@ -1,4 +1,4 @@
-// Analysis of Variances (ANOVA): computations
+// Analysis of Variances (ANOVA) - computations
 
 /* REFERENCES
 

package/src/anova/anova-ui.ts

@@ -1,4 +1,4 @@
-// Analysis of Variances (ANOVA): UI
+// Analysis of Variances (ANOVA) - UI
 
 import * as grok from 'datagrok-api/grok';
 import * as ui from 'datagrok-api/ui';

package/src/package-api.ts

@@ -260,4 +260,32 @@ export namespace funcs {
   export async function isApplicableXGBooster(df: DG.DataFrame , predictColumn: DG.Column ): Promise<boolean> {
     return await grok.functions.call('EDA:IsApplicableXGBooster', { df, predictColumn });
   }
+
+  /**
+  Perform optimization across multiple objectives: analyze trade-offs between conflicting objectives and identify Pareto-optimal points.
+  */
+  export async function paretoFront(): Promise<void> {
+    return await grok.functions.call('EDA:ParetoFront', {});
+  }
+
+  /**
+  Pareto front viewer
+  */
+  export async function paretoFrontViewer(): Promise<any> {
+    return await grok.functions.call('EDA:ParetoFrontViewer', {});
+  }
+
+  /**
+  Train probabilistic multi-parameter optimization (pMPO) model
+  */
+  export async function trainPmpo(): Promise<void> {
+    return await grok.functions.call('EDA:TrainPmpo', {});
+  }
+
+  /**
+  Apply trained probabilistic multi-parameter optimization (pMPO) model to score samples
+  */
+  export async function applyPmpo(table: DG.DataFrame , file: DG.FileInfo ): Promise<void> {
+    return await grok.functions.call('EDA:ApplyPmpo', { table, file });
+  }
 }

package/src/package.g.ts

@@ -37,34 +37,34 @@ export async function PCA(table: DG.DataFrame, features: DG.ColumnList, componen
 }
 
 //name: DBSCAN clustering
-//tags: dim-red-postprocessing-function
 //input: column col1 
 //input: column col2 
 //input: double epsilon = 0.01 { description: Minimum distance between two points to be considered as in the same neighborhood. }
 //input: int minimumPoints = 5 { description: Minimum number of points to form a dense region. }
 //meta.defaultPostProcessingFunction: true
+//meta.role: dimRedPostprocessingFunction
 export async function dbscanPostProcessingFunction(col1: DG.Column, col2: DG.Column, epsilon: number, minimumPoints: number) : Promise<void> {
   await PackageFunctions.dbscanPostProcessingFunction(col1, col2, epsilon, minimumPoints);
 }
 
 //name: None (number)
-//tags: dim-red-preprocessing-function
 //input: column col 
 //input: string _metric { optional: true }
 //output: object result
 //meta.supportedTypes: int,float,double,qnum
 //meta.supportedDistanceFunctions: Difference
+//meta.role: dimRedPreprocessingFunction
 export function numberPreprocessingFunction(col: DG.Column, _metric: string) {
   return PackageFunctions.numberPreprocessingFunction(col, _metric);
 }
 
 //name: None (string)
-//tags: dim-red-preprocessing-function
 //input: column col 
 //input: string _metric { optional: true }
 //output: object result
 //meta.supportedTypes: string
 //meta.supportedDistanceFunctions: One-Hot,Levenshtein,Hamming
+//meta.role: dimRedPreprocessingFunction
 export function stringPreprocessingFunction(col: DG.Column, _metric: string) {
   return PackageFunctions.stringPreprocessingFunction(col, _metric);
 }
@@ -102,9 +102,9 @@ export async function MCLClustering(df: DG.DataFrame, cols: DG.Column[], metrics
 
 //name: MCL
 //description: Markov clustering viewer
-//tags: viewer
 //output: viewer result
 //meta.showInGallery: false
+//meta.role: viewer
 export function markovClusteringViewer() : any {
   return PackageFunctions.markovClusteringViewer();
 }
@@ -522,3 +522,32 @@ export function isInteractiveXGBooster(df: DG.DataFrame, predictColumn: DG.Colum
 export function isApplicableXGBooster(df: DG.DataFrame, predictColumn: DG.Column) : boolean {
   return PackageFunctions.isApplicableXGBooster(df, predictColumn);
 }
+
+//name: Pareto Front
+//description: Perform optimization across multiple objectives: analyze trade-offs between conflicting objectives and identify Pareto-optimal points.
+//top-menu: ML | Pareto Front...
+export function paretoFront() : void {
+  PackageFunctions.paretoFront();
+}
+
+//name: Pareto front
+//description: Pareto front viewer
+//output: viewer result
+//meta.icon: icons/pareto-front-viewer.svg
+//meta.role: viewer
+export function paretoFrontViewer() : any {
+  return PackageFunctions.paretoFrontViewer();
+}
+
+//description: Train probabilistic multi-parameter optimization (pMPO) model
+//top-menu: Chem | Calculate | Train pMPO...
+export function trainPmpo() : void {
+  PackageFunctions.trainPmpo();
+}
+
+//description: Apply trained probabilistic multi-parameter optimization (pMPO) model to score samples
+//input: dataframe table 
+//input: file file 
+export async function applyPmpo(table: DG.DataFrame, file: DG.FileInfo) : Promise<void> {
+  await PackageFunctions.applyPmpo(table, file);
+}