@datagrok/eda 1.3.0 → 1.3.1

package/package.json

@@ -1,11 +1,11 @@
 {
   "name": "@datagrok/eda",
   "friendlyName": "EDA",
-  "version": "1.3.0",
+  "version": "1.3.1",
   "description": "Exploratory Data Analysis Tools",
   "dependencies": {
     "@datagrok-libraries/math": "^1.2.4",
-    "@datagrok-libraries/ml": "^6.7.6",
+    "@datagrok-libraries/ml": "^6.8.0",
     "@datagrok-libraries/tutorials": "^1.4.2",
     "@datagrok-libraries/utils": "^4.4.0",
     "@keckelt/tsne": "^1.0.2",
@@ -72,7 +72,8 @@
         },
         "Cluster": {
           "Cluster...": null,
-          "DBSCAN...": null
+          "DBSCAN...": null,
+          "MCL...": null
         },
         "Notebooks": {
           "Browse Notebooks": null,

package/src/package.ts

@@ -27,8 +27,8 @@ import {DimReductionMethods} from '@datagrok-libraries/ml/src/multi-column-dimen
 
 import {runKNNImputer} from './missing-values-imputation/ui';
 import {MCLEditor} from '@datagrok-libraries/ml/src/MCL/mcl-editor';
-import {markovCluster} from '@datagrok-libraries/ml/src/MCL/clustering-view';
-import {MCL_OPTIONS_TAG, MCLSerializableOptions} from '@datagrok-libraries/ml/src/MCL';
+import {MCLViewer} from '@datagrok-libraries/ml/src/MCL/mcl-viewer';
+import {MCLSerializableOptions} from '@datagrok-libraries/ml/src/MCL';
 
 import {getLinearRegressionParams, getPredictionByLinearRegression} from './regression';
 import {PlsModel} from './pls/pls-ml';
@@ -215,7 +215,7 @@ export function GetMCLEditor(call: DG.FuncCall): void {
 
 
 //top-menu: ML | Cluster | MCL...
-//name: MCL
+//name: MCLClustering
 //description: Markov clustering (MCL) is an unsupervised clustering algorithm for graphs based on simulation of stochastic flow.
 //input: dataframe df
 //input: list<column> cols
@@ -230,11 +230,11 @@ export function GetMCLEditor(call: DG.FuncCall): void {
 //input: double inflate = 2
 //input: int minClusterSize = 5
 //editor: EDA: GetMCLEditor
-export async function MCL(df: DG.DataFrame, cols: DG.Column[], metrics: KnownMetrics[],
+export async function MCLClustering(df: DG.DataFrame, cols: DG.Column[], metrics: KnownMetrics[],
   weights: number[], aggregationMethod: DistanceAggregationMethod, preprocessingFuncs: (DG.Func | null | undefined)[],
   preprocessingFuncArgs: any[], threshold: number = 80, maxIterations: number = 10, useWebGPU: boolean = false, inflate: number = 0,
   minClusterSize: number = 5,
-): Promise< DG.ScatterPlotViewer | undefined> {
+): Promise<MCLViewer> {
   const tv = grok.shell.tableView(df.name) ?? grok.shell.addTableView(df);
   const serializedOptions: string = JSON.stringify({
     cols: cols.map((col) => col.name),
@@ -249,29 +249,18 @@ export async function MCL(df: DG.DataFrame, cols: DG.Column[], metrics: KnownMet
     inflate: inflate,
     minClusterSize: minClusterSize ?? 5,
   } satisfies MCLSerializableOptions);
-  df.setTag(MCL_OPTIONS_TAG, serializedOptions);
+  //df.setTag(MCL_OPTIONS_TAG, serializedOptions);
 
-  const sc = tv.addViewer(DG.VIEWER.SCATTER_PLOT, {title: 'MCL', initializationFunction: 'EDA:MCLInitializationFunction'}) as DG.ScatterPlotViewer;
-  return sc;
+  const viewer = tv.addViewer('MCL', {mclProps: serializedOptions}) as MCLViewer;
+  return viewer;
 }
 
-//name: MCLInitializationFunction
-//input: viewer sc
-export async function MCLInitializationFunction(sc: DG.ScatterPlotViewer) {
-  const df = sc.dataFrame;
-  if (df === null)
-    throw new Error('Data frame of the scatter plot is null');
-  const mclTag = df.getTag(MCL_OPTIONS_TAG);
-  if (!mclTag)
-    throw new Error('MCL options tag on the dataFrame is not found');
-  const options: MCLSerializableOptions = JSON.parse(mclTag);
-  const cols = options.cols.map((colName) => df.columns.byName(colName));
-  const preprocessingFuncs = options.preprocessingFuncs.map((funcName) => funcName ? DG.Func.byName(funcName) : null);
-
-  const res = await markovCluster(df, cols, options.metrics, options.weights,
-    options.aggregationMethod, preprocessingFuncs, options.preprocessingFuncArgs, options.threshold,
-    options.maxIterations, options.useWebGPU, options.inflate, options.minClusterSize, sc);
-  return res?.sc;
+//name: MCL
+//description: Markov clustering viewer
+//tags: viewer
+//output: viewer result
+export function markovClusteringViewer(): MCLViewer {
+  return new MCLViewer();
 }
 
 //name: PLS

package/test-console-output-1.log

@@ -1,25 +1,22 @@
-CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/proxy
-CONSOLE LOG REQUEST: 200, https://community.datagrok.ai/javascripts/embed-topics.js
-CONSOLE LOG ENTRY: EULA not accepted
-CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Eda/1.3.0.X-89e958dd/xFkztr3gQPWtrHq96zjktPOwq2zAuwo7/1/wasm/EDA.js
-CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Eda/1.3.0.X-89e958dd/xFkztr3gQPWtrHq96zjktPOwq2zAuwo7/1/wasm/XGBoostAPI.js
-CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Eda/1.3.0.X-89e958dd/xFkztr3gQPWtrHq96zjktPOwq2zAuwo7/1/dist/package.js
+CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Eda/1.3.1.X-2914be5e/CV0PsYcg10ZxaPsVR39SV5KEXFakednj/1/wasm/EDA.js
+CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Eda/1.3.1.X-2914be5e/CV0PsYcg10ZxaPsVR39SV5KEXFakednj/1/wasm/XGBoostAPI.js
+CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Eda/1.3.1.X-2914be5e/CV0PsYcg10ZxaPsVR39SV5KEXFakednj/1/dist/package.js
 CONSOLE LOG ENTRY: Wasm not Loaded, Loading
-CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Eda/1.3.0.X-89e958dd/xFkztr3gQPWtrHq96zjktPOwq2zAuwo7/1/wasm/EDA.wasm
+CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Eda/1.3.1.X-2914be5e/CV0PsYcg10ZxaPsVR39SV5KEXFakednj/1/wasm/EDA.wasm
 CONSOLE LOG ENTRY: XGBoost not Loaded, Loading
-CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Eda/1.3.0.X-89e958dd/xFkztr3gQPWtrHq96zjktPOwq2zAuwo7/1/wasm/XGBoostAPI.wasm
-CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Eda/1.3.0.X-89e958dd/xFkztr3gQPWtrHq96zjktPOwq2zAuwo7/1/dist/package-test.js
-CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/funcs?text=package.id%2520%253D%2520%2522b7af4f90-9b00-11ef-82a9-bd81f91af6ac%2522
+CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Eda/1.3.1.X-2914be5e/CV0PsYcg10ZxaPsVR39SV5KEXFakednj/1/wasm/XGBoostAPI.wasm
+CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Eda/1.3.1.X-2914be5e/CV0PsYcg10ZxaPsVR39SV5KEXFakednj/1/dist/package-test.js
+CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/funcs?text=package.id%2520%253D%2520%25224133b820-c210-11ef-8164-7bb21cc75665%2522
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started ANOVA category
 CONSOLE LOG ENTRY: Started ANOVA Correctness
-CONSOLE LOG ENTRY: Finished ANOVA Correctness for 3 ms
+CONSOLE LOG ENTRY: Finished ANOVA Correctness for 2 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started ANOVA category
 CONSOLE LOG ENTRY: Started ANOVA Performance: 1M rows demog
-CONSOLE LOG ENTRY: Finished ANOVA Performance: 1M rows demog for 1702 ms
+CONSOLE LOG ENTRY: Finished ANOVA Performance: 1M rows demog for 1692 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
@@ -33,40 +30,79 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/font/Roboto-Italic.woff2
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/scatter-plot.md
 CONSOLE LOG REQUEST: 404, http://localhost:8080/uploads/youtube/visualizations2.png
 CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/scatter-plot-thumb.png
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/Axes-thumb.png').default%7D
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-colors-sizes-markers-labels-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-zoom-and-pack-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/scatter-plot-regression-line.png
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-selection-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/viewers/viewer-group-tooltip.png
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/group-tooltip-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-labels-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-jitter-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/scatter-plot-lines.png
-CONSOLE LOG ENTRY: distances to matrix: 21.55810546875 ms
+CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/viewers/scatter-plot-molecules.png
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/webgpu-scatterplot-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG ENTRY: distances to matrix: 16.864990234375 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/datagrok.md
-CONSOLE LOG ENTRY: Finished Dimensionality reduction: T-SNE All demog columns for 1249 ms
+CONSOLE LOG ENTRY: Finished Dimensionality reduction: T-SNE All demog columns for 1311 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started Dimensionality reduction: T-SNE category
 CONSOLE LOG ENTRY: Started Dimensionality reduction: T-SNE Numeric and string columns
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/scatter-plot.md
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/Axes-thumb.png').default%7D
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
 CONSOLE LOG REQUEST: 404, http://localhost:8080/uploads/youtube/visualizations2.png
 CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
-CONSOLE LOG ENTRY: distances to matrix: 38.77001953125 ms
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-zoom-and-pack-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-colors-sizes-markers-labels-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-selection-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/group-tooltip-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-labels-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-jitter-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/webgpu-scatterplot-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG ENTRY: distances to matrix: 25.337890625 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/datagrok.md
-CONSOLE LOG ENTRY: Finished Dimensionality reduction: T-SNE Numeric and string columns for 1296 ms
+CONSOLE LOG ENTRY: Finished Dimensionality reduction: T-SNE Numeric and string columns for 1376 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started Dimensionality reduction: T-SNE category
 CONSOLE LOG ENTRY: Started Dimensionality reduction: T-SNE Numeric column
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/scatter-plot.md
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/Axes-thumb.png').default%7D
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
 CONSOLE LOG REQUEST: 404, http://localhost:8080/uploads/youtube/visualizations2.png
 CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
-CONSOLE LOG ENTRY: distances to matrix: 13.593994140625 ms
+CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-selection-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-colors-sizes-markers-labels-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-zoom-and-pack-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/group-tooltip-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-labels-thumb.png
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-jitter-thumb.png
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/webgpu-scatterplot-thumb.png
+CONSOLE LOG ENTRY: distances to matrix: 37.18896484375 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/concepts/table.md
-CONSOLE LOG ENTRY: Finished Dimensionality reduction: T-SNE Numeric column for 1007 ms
+CONSOLE LOG ENTRY: Finished Dimensionality reduction: T-SNE Numeric column for 1409 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/datagrok.md
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
@@ -74,13 +110,26 @@ CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started Dimensionality reduction: T-SNE category
 CONSOLE LOG ENTRY: Started Dimensionality reduction: T-SNE String column
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/scatter-plot.md
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/Axes-thumb.png').default%7D
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-colors-sizes-markers-labels-thumb.png
 CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
 CONSOLE LOG REQUEST: 404, http://localhost:8080/uploads/youtube/visualizations2.png
-CONSOLE LOG ENTRY: distances to matrix: 14.421142578125 ms
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-zoom-and-pack-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-selection-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/group-tooltip-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-labels-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-jitter-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/webgpu-scatterplot-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG ENTRY: distances to matrix: 19.904052734375 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/datagrok.md
-CONSOLE LOG ENTRY: Finished Dimensionality reduction: T-SNE String column for 999 ms
+CONSOLE LOG ENTRY: Finished Dimensionality reduction: T-SNE String column for 1213 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
@@ -88,47 +137,80 @@ CONSOLE LOG ENTRY: Started Dimensionality reduction: UMAP category
 CONSOLE LOG ENTRY: Started Dimensionality reduction: UMAP All demog columns
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/scatter-plot.md
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/Axes-thumb.png').default%7D
 CONSOLE LOG REQUEST: 404, http://localhost:8080/uploads/youtube/visualizations2.png
 CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
-CONSOLE LOG ENTRY: knn graph: 30.7138671875 ms
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-colors-sizes-markers-labels-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-zoom-and-pack-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-selection-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/group-tooltip-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-labels-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-jitter-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/webgpu-scatterplot-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG ENTRY: knn graph: 58.4169921875 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/datagrok.md
-CONSOLE LOG ENTRY: fit: 2558.02783203125 ms
-CONSOLE LOG ENTRY: Finished Dimensionality reduction: UMAP All demog columns for 3787 ms
+CONSOLE LOG ENTRY: fit: 2777.2529296875 ms
+CONSOLE LOG ENTRY: Finished Dimensionality reduction: UMAP All demog columns for 4105 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started Dimensionality reduction: UMAP category
 CONSOLE LOG ENTRY: Started Dimensionality reduction: UMAP Numeric and string columns
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/scatter-plot.md
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/scatter-plot-thumb.png
+CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
 CONSOLE LOG REQUEST: 404, http://localhost:8080/uploads/youtube/visualizations2.png
 CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/Axes-thumb.png').default%7D
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/viewers/viewer-group-tooltip.png
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/scatter-plot-lines.png
-CONSOLE LOG ENTRY: knn graph: 23.527099609375 ms
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-colors-sizes-markers-labels-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-zoom-and-pack-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-selection-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/group-tooltip-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-labels-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-jitter-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/webgpu-scatterplot-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG ENTRY: knn graph: 77.815185546875 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/datagrok.md
-CONSOLE LOG ENTRY: fit: 2474.05810546875 ms
-CONSOLE LOG ENTRY: Finished Dimensionality reduction: UMAP Numeric and string columns for 3677 ms
+CONSOLE LOG ENTRY: fit: 2702.08203125 ms
+CONSOLE LOG ENTRY: Finished Dimensionality reduction: UMAP Numeric and string columns for 4075 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started Dimensionality reduction: UMAP category
 CONSOLE LOG ENTRY: Started Dimensionality reduction: UMAP Numeric column
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/scatter-plot.md
+CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
 CONSOLE LOG REQUEST: 404, http://localhost:8080/uploads/youtube/visualizations2.png
 CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/scatter-plot-thumb.png
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/Axes-thumb.png').default%7D
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/viewers/viewer-group-tooltip.png
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/scatter-plot-lines.png
-CONSOLE LOG ENTRY: knn graph: 61.01611328125 ms
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-colors-sizes-markers-labels-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-zoom-and-pack-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-selection-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/group-tooltip-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-labels-thumb.png
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-jitter-thumb.png
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/webgpu-scatterplot-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG ENTRY: knn graph: 86.321044921875 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/concepts/table.md
-CONSOLE LOG ENTRY: fit: 2537.39599609375 ms
-CONSOLE LOG ENTRY: Finished Dimensionality reduction: UMAP Numeric column for 3832 ms
+CONSOLE LOG ENTRY: fit: 2744.300048828125 ms
+CONSOLE LOG ENTRY: Finished Dimensionality reduction: UMAP Numeric column for 4098 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/datagrok.md
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
@@ -136,17 +218,30 @@ CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started Dimensionality reduction: UMAP category
 CONSOLE LOG ENTRY: Started Dimensionality reduction: UMAP String column
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/scatter-plot.md
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/Axes-thumb.png').default%7D
 CONSOLE LOG REQUEST: 404, http://localhost:8080/uploads/youtube/visualizations2.png
 CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/scatter-plot-thumb.png
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-colors-sizes-markers-labels-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-zoom-and-pack-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-selection-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/scatter-plot-regression-line.png
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
-CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/viewers/viewer-group-tooltip.png
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/group-tooltip-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-labels-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-jitter-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/scatter-plot-lines.png
-CONSOLE LOG ENTRY: knn graph: 69.875 ms
+CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/viewers/scatter-plot-molecules.png
+CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/webgpu-scatterplot-thumb.png
+CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
+CONSOLE LOG ENTRY: knn graph: 67.73095703125 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/datagrok.md
-CONSOLE LOG ENTRY: fit: 3474.83203125 ms
-CONSOLE LOG ENTRY: Finished Dimensionality reduction: UMAP String column for 4779 ms
+CONSOLE LOG ENTRY: fit: 3822.155029296875 ms
+CONSOLE LOG ENTRY: Finished Dimensionality reduction: UMAP String column for 5166 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
@@ -158,55 +253,55 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started Linear regression category
 CONSOLE LOG ENTRY: Started Linear regression Performance: 100K samples, 100 features
-CONSOLE LOG ENTRY: Finished Linear regression Performance: 100K samples, 100 features for 2379 ms
+CONSOLE LOG ENTRY: Finished Linear regression Performance: 100K samples, 100 features for 2431 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started Missing values imputation category
 CONSOLE LOG ENTRY: Started Missing values imputation Euclidean dist, 100K rows, 15 cols, 75 missing vals
-CONSOLE LOG ENTRY: Finished Missing values imputation Euclidean dist, 100K rows, 15 cols, 75 missing vals for 5901 ms
+CONSOLE LOG ENTRY: Finished Missing values imputation Euclidean dist, 100K rows, 15 cols, 75 missing vals for 6076 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started Missing values imputation category
 CONSOLE LOG ENTRY: Started Missing values imputation Manhattan dist, 100K rows, 15 cols, 75 missing vals
-CONSOLE LOG ENTRY: Finished Missing values imputation Manhattan dist, 100K rows, 15 cols, 75 missing vals for 5920 ms
+CONSOLE LOG ENTRY: Finished Missing values imputation Manhattan dist, 100K rows, 15 cols, 75 missing vals for 6105 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started Partial least squares regression category
 CONSOLE LOG ENTRY: Started Partial least squares regression Correctness
-CONSOLE LOG ENTRY: Finished Partial least squares regression Correctness for 44 ms
+CONSOLE LOG ENTRY: Finished Partial least squares regression Correctness for 54 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started Partial least squares regression category
 CONSOLE LOG ENTRY: Started Partial least squares regression Performance: 100K rows, 100 cols, 3 components
-CONSOLE LOG ENTRY: Finished Partial least squares regression Performance: 100K rows, 100 cols, 3 components for 1554 ms
+CONSOLE LOG ENTRY: Finished Partial least squares regression Performance: 100K rows, 100 cols, 3 components for 1562 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started Partial least squares regression category
 CONSOLE LOG ENTRY: Started Partial least squares regression Predictive modeling: 100K samples, 100 features, 3 components
-CONSOLE LOG ENTRY: Finished Partial least squares regression Predictive modeling: 100K samples, 100 features, 3 components for 1587 ms
+CONSOLE LOG ENTRY: Finished Partial least squares regression Predictive modeling: 100K samples, 100 features, 3 components for 1620 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started Principal component analysis category
 CONSOLE LOG ENTRY: Started Principal component analysis Correctness
-CONSOLE LOG ENTRY: Finished Principal component analysis Correctness for 19 ms
+CONSOLE LOG ENTRY: Finished Principal component analysis Correctness for 22 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started Principal component analysis category
 CONSOLE LOG ENTRY: Started Principal component analysis Performance: 100K rows, 100 cols, 3 components
-CONSOLE LOG ENTRY: Finished Principal component analysis Performance: 100K rows, 100 cols, 3 components for 3839 ms
+CONSOLE LOG ENTRY: Finished Principal component analysis Performance: 100K rows, 100 cols, 3 components for 4241 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started Principal component analysis category
 CONSOLE LOG ENTRY: Started Principal component analysis Performance: 1K rows, 5K cols, 3 components
-CONSOLE LOG ENTRY: Finished Principal component analysis Performance: 1K rows, 5K cols, 3 components for 3639 ms
+CONSOLE LOG ENTRY: Finished Principal component analysis Performance: 1K rows, 5K cols, 3 components for 3751 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
@@ -218,18 +313,18 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started Softmax category
 CONSOLE LOG ENTRY: Started Softmax Performance: 50K samples, 100 features
-CONSOLE LOG ENTRY: Finished Softmax Performance: 50K samples, 100 features for 2499 ms
+CONSOLE LOG ENTRY: Finished Softmax Performance: 50K samples, 100 features for 2603 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started XGBoost category
 CONSOLE LOG ENTRY: Started XGBoost Correctness
-CONSOLE LOG ENTRY: Finished XGBoost Correctness for 212 ms
+CONSOLE LOG ENTRY: Finished XGBoost Correctness for 204 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG ENTRY: Running tests
 CONSOLE LOG ENTRY: Started XGBoost category
 CONSOLE LOG ENTRY: Started XGBoost Performance: 50K samples, 100 features
-CONSOLE LOG ENTRY: Finished XGBoost Performance: 50K samples, 100 features for 1870 ms
+CONSOLE LOG ENTRY: Finished XGBoost Performance: 50K samples, 100 features for 1919 ms
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
 CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false