@datagrok/eda 1.1.36-rc → 1.2.0

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Files changed (6) hide show
  1. package/dist/package-test.js +1 -1
  2. package/dist/package-test.js.map +1 -1
  3. package/dist/package.js +1 -1
  4. package/dist/package.js.map +1 -1
  5. package/package.json +6 -6
  6. package/src/missing-values-imputation/ui.ts +1 -1
package/dist/package-test.js CHANGED
@@ -1,2 +1,2 @@
1
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this.countBits(!1)>0}findNext(t,e=!0){if(this.assureInRange(t,-1,this._length,"index"),t>=this._length-1)return-1;let n=31&(t=t<0?0:t+1);const o=this.lengthInInts;for(let r=Math.floor(t/32);r<o;r++){let o=e?this._data[r]:~this._data[r];if(0!=n)o&=4294967295<<n&4294967295,n=0;else if(!e&&-4294967296==o)continue;for(let e=0;0!=o;e+=8,o>>>=8){const n=V._firstOnBit[255&o];if(n>=0)return(t=n+32*r+e)>=this._length?-1:t}}return-1}findPrev(t,e=!0){if(0==t)return-1;this.assureInRange(t,-1,this._length,"index");let n=1+(t=t<0?this._length-1:t-1)&31;for(let o=Math.floor(t/32);o>=0;o--){let t=e?this._data[o]:~this._data[o];0!=n&&(t&=~(4294967295<<n),n=0);for(let e=24;0!=t;e-=8,t<<=8){const n=V._lastOnBit[t>>>24];if(n>=0)return n+32*o+e}}return-1}}function W(t={}){const e=function(){if(!t||!t.scoringMatrix||!t.alphabetIndexes)return(t,e)=>t===e?0:1;if(t.scoringMatrix.length!==Object.keys(t.alphabetIndexes).length)throw new Error("Scoring matrix and alphabet indexes should have the same 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ce(e){if(e.type!=t.COLUMN_TYPE.FLOAT&&e.type!=t.COLUMN_TYPE.INT)throw new Error(ae+e.type)}function le(t){if(t.stats.missingValueCount>0)throw new Error(`The column '${t.name}' has missing values.`)}function ue(t,e){if(function(t,e){if(e<ne)throw new Error(re);if(e>t.length)throw new Error(se);for(const e of t)ce(e),le(e)}(t,e),t.length*t.byIndex(0).length>oe)throw new Error(ie)}var he,fe,me,de,ye,pe,ge,Ce,Ae,we,Ee,ve,xe,be,Se;function _e(t,e,o,r,s){return i=this,a=void 0,l=function*(){ue(e,o);const t=r?1:0,i=s?1:0;return yield async function(t,e,o,r,s){return new Promise(((t,i)=>{const a=new Worker(new URL(n.p+n.u(91),n.b));a.postMessage(te(EDA.principalComponentAnalysis.arguments,[e,o,r,s])),a.onmessage=function(e){a.terminate(),t(ee(EDA.principalComponentAnalysis,e.data))}}))}(0,e,o,t,i)},new((c=void 0)||(c=Promise))((function(t,e){function n(t){try{r(l.next(t))}catch(t){e(t)}}function o(t){try{r(l.throw(t))}catch(t){e(t)}}function r(e){var r;e.done?t(e.value):(r=e.value,r 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Set([ct.TANIMOTO,ct.COSINE,ct.SOKAL,ct.ASYMMETRIC]),function(t){t.ADD="ADD",t.SUB="SUB",t.MULT="MULT"}(ut||(ut={})),function(t){t.SQUARE="SQUARE",t.INVERSE="INVERSE",t.TRANSPOSE="TRANSPOSE",t.NORM="NORM",t.COLUMN_NORM="COLUMN_NORM"}(ht||(ht={})),function(t){t.SCALARMULT="SCALARMULT",t.SCALARADD="SCALARADD",t.SCALARPOW="SCALARPOW"}(ft||(ft={})),Object.prototype.toString;const dt="dimensionality-reducer-terminate-event";var yt,pt;(pt=yt||(yt={})).EUCLIDEAN="EUCLIDEAN",pt.MANHATTAN="MANHATTAN";const gt=t=>null==t;function Ct(t,e){return`${e} (${t.length>4?`${t.length} columns`:t.map((t=>t.name)).join(", ")})`}async function At(o,r,s,i,a,c,l,u=!0,h=!1,f={preprocessingFuncArgs:[]},m={},d=null,y={}){const p={showXAxis:!1,showYAxis:!1,showXSelector:!1,showYSelector:!1};if(r.length!==i.length||r.length!==c.length||r.length!==a.length||r.length!==f.preprocessingFuncArgs.length)throw new Error("columns, metrics and preprocessing functions, weights and function argumentsmust have the same 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v(){o.columns.add(t.Column.float(w[0],o.rowCount)),o.columns.add(t.Column.float(w[1],o.rowCount));let h=null;u&&(A=g.scatterPlot({...p,x:w[0],y:w[1],title:m.scatterPlotName??Ct(r,s)}),ot.setUpdateIndicator(A.root,!0));const d=e.events.onViewerClosed.subscribe((t=>{const n=t.args.viewer;n?.getOptions()?.look?.title&&A?.getOptions()?.look?.title&&n?.getOptions()?.look?.title===A?.getOptions()?.look?.title&&(e.events.fireCustomEvent(dt,{}),d.unsubscribe(),h?.(),C.close())})),y=new Promise((async(t,o)=>{try{h=t;const o=[];for(let t=0;t<c.length;++t){const e=c[t];if(f.distanceFnArgs||(f.distanceFnArgs=[]),e){const n=e.inputs[0].name,s=e.inputs[1].name,{entries:a,options:c}=await e.apply({[n]:r[t],[s]:i[t],...f.preprocessingFuncArgs[t]??{}});o.push({entries:a,options:c}),f.distanceFnArgs.push(c)}else{const e=r[t].toList(),n={};o.push({entries:e,options:n}),f.distanceFnArgs.push(n)}}t(await async function(t,o,r,s,i,a,c){let l=await async function(t,o,r,s,i,a,c){if(!a.distanceFnArgs)throw new 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x=await v();if(h&&x){const b=t.TaskBarProgressIndicator.create("Clustering embeddings ...");try{const S=await function(t,e,o,r){return mt(this,void 0,void 0,(function*(){return new Promise((function(s,i){const a=new Worker(new URL(n.p+n.u(682),n.b));a.postMessage({embedX:t,embedY:e,minPts:r,epsilon:o}),a.onmessage=({data:{error:t,clusters:e}})=>{a.terminate(),t?i(t):s(e)}}))}))}(x[0],x[1],f.dbScanEpsilon??.01,f.dbScanMinPts??4),_=o.columns.getUnusedName("Cluster (DBSCAN)");o.columns.addNewString(_).init((t=>S[t].toString())),A&&(A.props.colorColumnName=_)}catch(M){e.shell.error("Clustering embeddings failed"),console.error(M)}finally{b.close()}}if(x){const N=o.columns.byName(w[0]),I=o.columns.byName(w[1]);if(N.init((t=>x[0][t])),I.init((t=>x[1][t])),d)try{const T=d.inputs[0].name,O=d.inputs[1].name;await d.prepare({[T]:N,[O]:I,...y}).call(!0)}catch(R){e.shell.error("Post-processing failed"),console.error(R)}if(A)return ot.setUpdateIndicator(A.root,!1),A.helpUrl="/help/compute/sequence-space",A}}catch(L){e.shell.error("Dimensionality reduction failed"),console.error(L),C.close(),A&&ot.setUpdateIndicator(A.root,!1)}};return new Promise((async(t,e)=>{try{if(m.fastRowCount&&o.rowCount>m.fastRowCount&&!m[rt])ot.dialog().add(ot.divText("Analysis might take several minutes. Do you want to continue?")).onOK((async()=>{try{const e=await C();t(e)}catch(t){e(t)}})).onCancel((()=>t(void 0))).show();else{const e=await C();t(e)}}catch(t){e(t)}}))}var wt=function(t,e,n,o){return new(n||(n=Promise))((function(r,s){function i(t){try{c(o.next(t))}catch(t){s(t)}}function a(t){try{c(o.throw(t))}catch(t){s(t)}}function c(t){var e;t.done?r(t.value):(e=t.value,e instanceof n?e:new n((function(t){t(e)}))).then(i,a)}c((o=o.apply(t,e||[])).next())}))};const Et={SUBJ:"subj",STUDY:"study",SITE:"site",AGE:"age",SEX:"sex",RACE:"race",DISEASE:"disease",WEIGHT:"weight",HEIGHT:"height"};function vt(t,n,o){return wt(this,void 0,void 0,(function*(){const r=e.data.demo.demog(100);e.shell.addTableView(r),R(!!(yield At(r,t.map((t=>r.col(t))),n,o,t.map((()=>1)),t.map((()=>{})),"EUCLIDEAN",!0,!0,{preprocessingFuncArgs:t.map((()=>({})))})),!0,"No scatterplot returned");const s=r.columns.names().filter((t=>t.toLowerCase().startsWith("embed")));R(s.length,2,"Wrong number of embeddings 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vt(r,w.UMAP,o)}))))})),L("Dimensionality reduction: T-SNE",(()=>{O("Numeric column",(()=>wt(void 0,void 0,void 0,(function*(){yield vt([Et.AGE],w.T_SNE,[_.Difference])}))),{timeout:3e4}),O("String column",(()=>wt(void 0,void 0,void 0,(function*(){yield vt([Et.SEX],w.T_SNE,[E.Onehot])}))),{timeout:3e4}),O("Numeric and string columns",(()=>wt(void 0,void 0,void 0,(function*(){yield vt([Et.SEX,Et.AGE],w.T_SNE,[E.Onehot,_.Difference])})))),O("All demog columns",(()=>wt(void 0,void 0,void 0,(function*(){const n=e.data.demo.demog(10).columns.toList().filter((t=>Object.values(Et).includes(t.name))),o=n.map((e=>e.type===t.COLUMN_TYPE.STRING?E.Onehot:_.Difference)),r=n.map((t=>t.name));yield vt(r,w.T_SNE,o)}))))}));const xt={i32:"HEAP32",f32:"HEAPF32"},bt={i32:Int32Array,f32:Float32Array},St={i32:2,f32:2},_t={i32:DG.Column.fromInt32Array,f32:DG.Column.fromFloat32Array};class Mt{constructor(t){this.data=t}complementArrOfParams(t){t.push(this.data)}complementArrOfTypes(t){t.push("number")}allocateMemoryForBuffer(t){}isMemoryForBufferAllocated(){return!0}putDataToBuffer(t){}getDataFromBuffer(t){}freeBuffer(t){}}class Nt extends Mt{constructor(t,e,n=!1){super(t),this.type=e,this.toUpdate=n,this.buf=0,this.numOfRows=t.length}complementArrOfParams(t){t.push(this.buf),t.push(this.numOfRows)}complementArrOfTypes(t){t.push("number"),t.push("number")}allocateMemoryForBuffer(t){this.buf=t._malloc(this.numOfRows*bt[this.type].BYTES_PER_ELEMENT)}isMemoryForBufferAllocated(){return 0!=this.buf}putDataToBuffer(t){if(this.isMemoryForBufferAllocated()){const e=this.type,n=St[e],o=t[xt[e]];let r=null;const s=this.data;r="int"==s.type&&"i32"==e||"double"==s.type&&"f32"==e?s.getRawData():new bt[e](s.getRawData()),r&&o.set(r,this.buf>>n)}}getDataFromBuffer(t){if(this.toUpdate&&this.isMemoryForBufferAllocated()){const e=this.type,n=t[xt[e]],o=this.buf,r=bt[e].BYTES_PER_ELEMENT,s=this.data.getRawData();for(let t=0;t<this.numOfRows;t++)s[t]=n[o/r+t]}}freeBuffer(t){this.isMemoryForBufferAllocated()&&(t._free(this.buf),this.buf=0)}}class It extends Nt{constructor(t,e){super([],t,!0),this.numOfRows=e}putDataToBuffer(t){}getDataFromBuffer(t){if(this.toUpdate&&this.isMemoryForBufferAllocated()){const e=this.type,n=t[xt[e]],o=this.buf,r=_t[e],s=new bt[e](this.numOfRows);for(let t=0;t<s.length;t++)s[t]=n[o/s.BYTES_PER_ELEMENT+t];this.data=r("name",s)}}}class Tt extends Mt{constructor(t,e,n=!1){super(t),this.type=e,this.toUpdate=n,this.buf=0,this.numOfColumns=t.length,this.numOfRows=t[0].length}complementArrOfParams(t){t.push(this.buf),t.push(this.numOfRows),t.push(this.numOfColumns)}complementArrOfTypes(t){t.push("number"),t.push("number"),t.push("number")}allocateMemoryForBuffer(t){this.buf=t._malloc(this.numOfRows*this.numOfColumns*bt[this.type].BYTES_PER_ELEMENT)}isMemoryForBufferAllocated(){return 0!=this.buf}putDataToBuffer(t){if(this.isMemoryForBufferAllocated()){const e=this.type,n=St[e],o=t[xt[e]],r=bt[e].BYTES_PER_ELEMENT;for(let t=0;t<this.numOfColumns;t++){let s=null;const i=this.data[t];s="int"==i.type&&"i32"==e||"double"==i.type&&"f32"==e?i.getRawData():new bt[e](i.getRawData()),null!=s&&o.set(s,this.buf+t*this.numOfRows*r>>n)}}}getDataFromBuffer(t){if(this.toUpdate&&this.isMemoryForBufferAllocated()){const e=this.type,n=t[xt[e]],o=this.numOfRows,r=this.numOfColumns,s=new bt[e](n.buffer,this.buf,o*r);for(let t=0;t<r;t++){const e=this.data[t].getRawData();for(let n=0;n<o;n++)e[n]=s[n+t*o]}}}freeBuffer(t){this.isMemoryForBufferAllocated()&&(t._free(this.buf),this.buf=0)}}class Ot extends Tt{constructor(t,e,n){super([[]],t,!0),this.data=[],this.numOfColumns=n,this.numOfRows=e}putDataToBuffer(t){}getDataFromBuffer(t){if(this.toUpdate&&this.isMemoryForBufferAllocated()){const e=this.type,n=t[xt[e]],o=this.numOfRows,r=this.numOfColumns,s=bt[e].BYTES_PER_ELEMENT,i=_t[e],a=this.buf;for(let t=0;t<r;t++){const r=new bt[e](o);for(let e=0;e<o;e++)r[e]=n[a/s+e+t*o];this.data.push(i((t+1).toString(),r))}}}}const Rt={intColumn:t=>new Nt(t,"i32"),newIntColumn:t=>new It("i32",t),intColumns:t=>new Tt(t.toList(),"i32"),newIntColumns:(t,e)=>new Ot("i32",t,e),floatColumn:t=>new Nt(t,"f32"),newFloatColumn:t=>new It("f32",t),floatColumns:t=>new Tt(t.toList(),"f32"),newFloatColumns:(t,e)=>new Ot("f32",t,e),int:t=>new Mt(t),num:t=>new Mt(t)},Lt={tableFromColumns:t=>DG.DataFrame.fromColumns(t.data),num:t=>t,int:t=>t,double:t=>t,column:t=>t.data};function Dt(t,e,n){const o=t[e],r=o.arguments,s=[];let i=0;for(const t in r){const e=r[t];if("_callResult"!=t){switch(e.type){case"floatColumns":case"int":case"num":case"floatColumn":case"intColumn":case"intColumns":e.data=Rt[e.type](n[i]),i++;break;case"newFloatColumns":case"newIntColumns":const t=r[e.numOfRows.ref].data[e.numOfRows.value],o=r[e.numOfColumns.ref].data[e.numOfColumns.value];e.data=Rt[e.type](t,o);break;case"newFloatColumn":case"newIntColumn":const s=r[e.numOfRows.ref].data[e.numOfRows.value];e.data=Rt[e.type](s)}s.push(r[t].data)}}const a=function(t,e,n,o){let r;for(const e of o)e.allocateMemoryForBuffer(t);let s=!0;for(const t of o)s&=t.isMemoryForBufferAllocated();if(s){const n=[],s=[];for(const e of o)e.complementArrOfParams(n),e.complementArrOfTypes(s),e.putDataToBuffer(t);const i="number";r=t.ccall(e,i,s,n);for(const e of o)e.getDataFromBuffer(t)}for(const e of o)e.freeBuffer(t);if(null!=r)return r}(t,e,0,s);r._callResult=Rt.num(a);const c=o.output;if("objects"!=c.type)return Lt[c.type](r[c.source].data);const l=[];for(const t of c.source)l.push(r[t].data.data);return l}const Pt="num",Ft="floatColumn",Ut="intColumn",Bt="floatColumns",kt="newFloatColumns",Ht="intColumns",Gt="newIntColumns",Vt="newFloatColumn",Wt="newIntColumn",$t="column",Yt="_callResult",Xt="numOfRows",Kt="numOfColumns",jt="ref",zt="value",qt="tableFromColumns",Qt="objects",Jt="int",Zt="double",te={intColumn:Int32Array,floatColumn:Float32Array,floatColumns:Float32Array,newFloatColumns:Float32Array,intColumns:Int32Array,newIntColumns:Int32Array,newFloatColumn:Float32Array,newIntColumn:Int32Array};function ee(t,e){let n,o=[],r=0;for(const s in t){const i=t[s],a=i.type;if(s!==Yt){switch(a){case Pt:case Jt:case Zt:i.data=e[r],r++;break;case Ut:case Ft:let o;const s=e[r],c=s.length;o=s.type===Jt&&a===Ut||s.type===Zt&&a===Ft?s.getRawData().slice(0,c):new te[a](s.getRawData().slice(0,c)),i.data={array:o,numOfRows:c},r++;break;case Wt:case Vt:let l=0;n=i[Xt][jt],l=t[n].type===Pt?t[n].data:t[n].data[i[Xt][zt]],i.data={numOfRows:l},r++;break;case Ht:case Bt:let u=[];const h=e[r].byIndex(0).length;for(const t of e[r].toList())t.type===Jt&&a===Ut||t.type===Zt&&a===Ft?u.push(t.getRawData().slice(0,h)):u.push(new te[a](t.getRawData().slice(0,h)));i.data={arrays:u,numOfRows:h,numOfColumns:u.length},r++;break;case Gt:case kt:let f=0,m=0;n=i[Xt][jt],f=t[n].type===Pt?t[n].data:t[n].data[i[Xt][zt]],n=i[Kt][jt],m=t[n].type===Pt?t[n].data:t[n].data[i[Kt][zt]],i.data={numOfRows:f,numOfColumns:m},r++;break;default:return}o.push(i)}}return o}function ne(t,e){t.arguments._callResult=e.callResult,function(t,e){const n={newFloatColumns:DG.Column.fromFloat32Array,newIntColumns:DG.Column.fromInt32Array,newFloatColumn:DG.Column.fromFloat32Array,newIntColumn:DG.Column.fromInt32Array};let o=0;for(const r in t){const s=t[r];switch(s.type){case Pt:case Jt:case Zt:case Ut:case Ft:case Bt:case Ht:break;case Vt:case Wt:let t;null==s.name?t=(0).toString():a=s.name,s.column=n[s.type](t,e[o].array);break;case Gt:case kt:let r=[],i=e[o].arrays.length,a=[];if(null==s.names)for(let 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0,void 0,void 0,(function*(){const t=ke(100,2,1).columns,e=t.byIndex(2),n=yield Le(t,e),o=new Uint8Array(n.buffer),r=De(t,new Float32Array(o.buffer)),s=He(r,r);R(s<Xe,!0,`Incorrect linear regression computations, error is too big: ${s}; expected: < 0.1`)}))),{timeout:Ye})}));var Ke=function(t,e,n,o){return new(n||(n=Promise))((function(r,s){function i(t){try{c(o.next(t))}catch(t){s(t)}}function a(t){try{c(o.throw(t))}catch(t){s(t)}}function c(t){var e;t.done?r(t.value):(e=t.value,e instanceof n?e:new n((function(t){t(e)}))).then(i,a)}c((o=o.apply(t,e||[])).next())}))};const je="Avg-s",ze="Stddev-s";var qe;!function(t){t[t.MAX_SAMLPES=5e4]="MAX_SAMLPES",t[t.MAX_FEATURES=100]="MAX_FEATURES"}(qe||(qe={}));class Qe{static isApplicable(e,n){for(const t of e)if(!t.matches("numerical"))return!1;return n.type===t.COLUMN_TYPE.STRING}static isInteractive(t,e){return t.length<=qe.MAX_FEATURES&&e.length<=qe.MAX_SAMLPES}constructor(e,n){if(this.params=void 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Expected: float, passed: ${n.type}`);this.params[e]=n.getRawData()}const c=s.byName(je);if(c.type!==t.COLUMN_TYPE.FLOAT)throw new Error("incorrect average values column type");this.avgs=c.getRawData();const l=s.byName(ze);if(l.type!==t.COLUMN_TYPE.FLOAT)throw new Error("incorrect standard deviations column type");this.stdevs=l.getRawData()}catch(t){throw new Error(`Failed to load model: ${t instanceof Error?t.message:"the platform issue"}`)}}}toBytes(){if(void 0===this.params)throw new Error("Non-trained model");const e=this.classesCount,n=new Array(e+2);for(let o=0;o<e;++o)n[o]=t.Column.fromFloat32Array(this.categories[o],this.params[o]);n[e]=t.Column.fromFloat32Array(je,this.avgs),n[e+1]=t.Column.fromFloat32Array(ze,this.stdevs);const o=t.DataFrame.fromColumns(n).toByteArray(),r=o.length,s=new Uint8Array(r+4);return new Uint32Array(s.buffer,0,1)[0]=r,s.set(o,4),s}fit(e,n){return Ke(this,arguments,void 0,(function*(e,n,o=1,r=100,s=.1,i=.001){if(e.length!==this.featuresCount)throw new Error("Training failes - incorrect features count");if(o<=0||r<1||s<=0||i<=0)throw new Error("Training failes - incorrect fitting hyperparameters");this.extractStats(e);const a=n.length,c=n.categories.length,l=n.categories;for(let t=0;t<c;++t)this.categories[t]=l[t];try{const l=function(t,e,n,o,r,s,i,a,c,l,u){return Dt(EDA,"fitSoftmax",[t,e,n,o,r,s,i,a,c,l,u])}(e,t.Column.fromFloat32Array("avgs",this.avgs,this.featuresCount),t.Column.fromFloat32Array("stdevs",this.stdevs,this.featuresCount),t.Column.fromInt32Array("targets",n.getRawData(),a),c,r,o,s,i,this.featuresCount+1,c).columns;this.params=new Array(c);for(let t=0;t<c;++t)this.params[t]=l.byIndex(t).getRawData()}catch(t){try{this.params=yield this.fitSoftmaxParams(e,n,r,o,s,i)}catch(t){throw new Error("Training failes")}}if(void 0===this.params)throw new Error("Training failes")}))}extractStats(e){let n=0;for(const o of e){if(o.type!==t.COLUMN_TYPE.INT&&o.type!==t.COLUMN_TYPE.FLOAT)throw new Error("Training failes - incorrect features type");this.avgs[n]=o.stats.avg,this.stdevs[n]=o.stats.stdev,++n}}normalized(e){const n=e.byIndex(0).length,o=new Array(n);for(let t=0;t<n;++t)o[t]=new Float32Array(this.featuresCount);let r=0;for(const s of e){if(s.type!==t.COLUMN_TYPE.INT&&s.type!==t.COLUMN_TYPE.FLOAT)throw new Error("Training failes - incorrect features type");const e=s.getRawData(),i=this.avgs[r],a=this.stdevs[r];if(a>0)for(let t=0;t<n;++t)o[t][r]=(e[t]-i)/a;else for(let t=0;t<n;++t)o[t][r]=0;++r}return o}transposed(e){const n=e.byIndex(0).length,o=this.featuresCount,r=new Array(o);for(let t=0;t<o;++t)r[t]=new Float32Array(n);let s=0;for(const o of e){if(o.type!==t.COLUMN_TYPE.INT&&o.type!==t.COLUMN_TYPE.FLOAT)throw new Error("Training failes - incorrect features type");const e=o.getRawData(),i=this.avgs[s],a=this.stdevs[s];if(a>0)for(let t=0;t<n;++t)r[s][t]=(e[t]-i)/a;else for(let t=0;t<n;++t)r[s][t]=0;++s}return r}preprocessedTargets(e){if(e.type!==t.COLUMN_TYPE.STRING)throw new Error("Training failes - incorrect target type");const n=this.classesCount,o=e.length,r=e.getRawData(),s=new Array(o),i=new Uint32Array(n).fill(0);for(let t=0;t<o;++t)s[t]=new Uint8Array(n).fill(0);for(let t=0;t<o;++t)s[t][r[t]]=1,++i[r[t]];return{oneHot:s,weights:i}}predict(e){if(void 0===this.params)throw new Error("Non-trained model");if(e.length!==this.featuresCount)throw new Error("Predcition fails: incorrect features count");const n=this.normalized(e),o=n.length,r=this.featuresCount,s=this.classesCount;let i,a;const c=new Float32Array(s);let l,u,h;const f=new Array(o);for(let t=0;t<o;++t){i=n[t],l=0;for(let t=0;t<s;++t){a=this.params[t],l=a[r];for(let t=0;t<r;++t)l+=a[t]*i[t];c[t]=Math.exp(l)}u=c[0],h=0;for(let t=1;t<s;++t)u<c[t]&&(u=c[t],h=t);f[t]=this.categories[h]}return t.Column.fromStrings("predicted",f)}fitSoftmaxParams(t,e,o,r,s,i){return Ke(this,void 0,void 0,(function*(){const a=this.preprocessedTargets(e);return new Promise(((c,l)=>{const u=new Worker(new URL(n.p+n.u(501),n.b));u.postMessage({features:this.normalized(t),transposed:this.transposed(t),oneHot:a.oneHot,classesWeights:a.weights,targetRaw:e.getRawData(),iterations:o,rate:r,penalty:s,tolerance:i}),u.onmessage=function(t){u.terminate(),c(t.data.params),console.log(`Loss: ${t.data.loss}`)}}))}))}}var Je,Ze,tn;!function(t){t[t.ITERATIONS=20]="ITERATIONS",t[t.ETA=.3]="ETA",t[t.MAX_DEPTH=6]="MAX_DEPTH",t[t.LAMBDA=1]="LAMBDA",t[t.ALPHA=0]="ALPHA"}(Je||(Je={})),function(t){t[t.SAMLPES_HIGH=1e5]="SAMLPES_HIGH",t[t.SAMLPES_MID=5e4]="SAMLPES_MID",t[t.SAMPLES_LOW=1e4]="SAMPLES_LOW",t[t.FEATURES_HIGH=10]="FEATURES_HIGH",t[t.FEATURES_MID=20]="FEATURES_MID",t[t.FEATURES_LOW=100]="FEATURES_LOW"}(Ze||(Ze={})),function(t){t[t.MODEL=1e7]="MODEL",t[t.UTILS=1]="UTILS",t[t.PACK=128]="PACK",t[t.SIZE=4]="SIZE"}(tn||(tn={}));const en=t.FLOAT_NULL;var nn;!function(t){t.PREDICT="Prediction",t.TYPE="Type",t.PARAMS="Params count",t.CATS="Categories",t.CATS_SIZE="Categories size"}(nn||(nn={}));class on{static isApplicable(t,e){for(const e of t)if(!e.matches("numerical"))return!1;return!(!e.matches("numerical")&&!e.matches("string"))}static isInteractive(t,e){const n=t.length,o=e.length;return o<=Ze.SAMPLES_LOW?n<=Ze.FEATURES_LOW:o<=Ze.SAMLPES_MID?n<=Ze.FEATURES_MID:o<=Ze.SAMLPES_HIGH&&n<=Ze.FEATURES_HIGH}constructor(e){var n;if(this.modelParams=void 0,this.targetType=void 0,this.targetCategories=void 0,e)try{let o=0;const r=new Uint32Array(e.buffer,o,1)[0];o+=tn.SIZE;const s=t.DataFrame.fromByteArray(new Uint8Array(e.buffer,o,r));o+=r,this.targetType=s.get(nn.TYPE,0);const i=s.get(nn.PARAMS,0),a=s.get(nn.CATS_SIZE,0);if(a>0){const r=t.DataFrame.fromByteArray(new Uint8Array(e.buffer,o,a));this.targetCategories=null===(n=r.col(nn.CATS))||void 0===n?void 0:n.toList()}o+=a,o=4*Math.ceil(o/4),this.modelParams=new Int32Array(e.buffer,o,i)}catch(t){throw new Error(`Failed to load model: ${t instanceof Error?t.message:"the platform issue"}`)}}fit(e,o){return r=this,s=arguments,a=function*(e,o,r=Je.ITERATIONS,s=Je.ETA,i=Je.MAX_DEPTH,a=Je.LAMBDA,c=Je.ALPHA){this.targetType=o.type,this.targetType===t.COLUMN_TYPE.STRING&&(this.targetCategories=o.categories),this.modelParams=yield async function(t,e,o,r,s,i,a,c,l,u){return new Promise(((h,f)=>{const m=e.length,d=t.length,y=new Float32Array(m*d);let p,g;for(let e=0;e<d;++e){g=t.byIndex(e).getRawData(),p=e*m;for(let t=0;t<m;++t)y[t+p]=g[t]}const C=new Worker(new URL(n.p+n.u(990),n.b));C.postMessage({features:y,target:e.getRawData(),samplesCount:m,featuresCount:d,modelReserve:l,utilsLength:u,iterations:r,eta:s,maxDepth:i,lambda:a,alpha:c,missingValue:o}),C.onmessage=function(t){C.terminate(),h(t.data.params)}}))}(e,o,en,r,s,i,a,c,tn.MODEL,tn.UTILS)},new((i=void 0)||(i=Promise))((function(t,e){function n(t){try{c(a.next(t))}catch(t){e(t)}}function o(t){try{c(a.throw(t))}catch(t){e(t)}}function c(e){var r;e.done?t(e.value):(r=e.value,r instanceof i?r:new i((function(t){t(r)}))).then(n,o)}c((a=a.apply(r,s||[])).next())}));var r,s,i,a}predict(e){if(void 0===this.modelParams)throw new Error("Failed to apply non-trained model");const n=function(t,e,n){const o=t.byIndex(0).length,r=t.length,s=n.length;let i=XGBoostModule.HEAPF32;const a=XGBoostModule.HEAP32,c=XGBoostModule._malloc(o*r*4),l=XGBoostModule._malloc(4*o),u=XGBoostModule._malloc(4*s);for(let e=0;e<r;++e){const n=t.byIndex(e).getRawData();for(let t=0;t<o;++t)i[c/4+t+e*o]=n[t]}for(let t=0;t<s;++t)a[u/4+t]=n[t];XGBoostModule._predict(c,o,r,e,u,s,l,o),i=XGBoostModule.HEAPF32;const h=new Float32Array(o);for(let t=0;t<o;++t)h[t]=i[l/4+t];return XGBoostModule._free(c),XGBoostModule._free(l),XGBoostModule._free(u),h}(e,en,this.modelParams);switch(this.targetType){case t.COLUMN_TYPE.STRING:return this.stringColPrediction(n);case t.COLUMN_TYPE.INT:return this.intColPrediction(n);case t.COLUMN_TYPE.BIG_INT:return this.bigIntColPrediction(n);default:return t.Column.fromFloat32Array(nn.PREDICT,n)}}toBytes(){if(void 0===this.modelParams||void 0===this.targetType)throw new Error("Failed to pack non-trained model");const e=void 0!==this.targetCategories?t.DataFrame.fromColumns([t.Column.fromList(t.COLUMN_TYPE.STRING,nn.CATS,this.targetCategories)]).toByteArray():void 0,n=void 0!==e?e.length:0,o=this.modelParams.length*this.modelParams.BYTES_PER_ELEMENT,r=t.DataFrame.fromColumns([t.Column.fromStrings(nn.TYPE,[this.targetType]),t.Column.fromInt32Array(nn.PARAMS,new Int32Array([this.modelParams.length])),t.Column.fromInt32Array(nn.CATS_SIZE,new Int32Array([n]))]).toByteArray(),s=r.length,i=64*Math.ceil((tn.SIZE+s+n+o+tn.PACK)/64),a=new Uint8Array(i);let c=0;return new Uint32Array(a.buffer,c,1)[0]=s,c+=tn.SIZE,a.set(r,c),c+=s,n>0&&a.set(e,c),c+=n,c=4*Math.ceil(c/4),a.set(new Uint8Array(this.modelParams.buffer),c),a}stringColPrediction(e){const n=e.length;if(void 0===this.targetCategories)throw new Error("Predicting fails: undefined categories");const o=new Array(n),r=this.targetCategories.length-1;for(let t=0;t<n;++t)o[t]=this.targetCategories[(s=Math.round(e[t]),Math.max(0,Math.min(s,r)))];var s;return t.Column.fromList(t.COLUMN_TYPE.STRING,nn.PREDICT,o)}intColPrediction(e){const n=e.length,o=new Int32Array(n);for(let t=0;t<n;++t)o[t]=Math.round(e[t]);return t.Column.fromInt32Array(nn.PREDICT,o,n)}bigIntColPrediction(e){const n=e.length,o=new BigInt64Array(n);for(let t=0;t<n;++t)o[t]=BigInt(Math.round(e[t]));return t.Column.fromBigInt64Array(nn.PREDICT,o)}}var rn=function(t,e,n,o){return new(n||(n=Promise))((function(r,s){function i(t){try{c(o.next(t))}catch(t){s(t)}}function a(t){try{c(o.throw(t))}catch(t){s(t)}}function c(t){var e;t.done?r(t.value):(e=t.value,e instanceof n?e:new n((function(t){t(e)}))).then(i,a)}c((o=o.apply(t,e||[])).next())}))};const sn=100,an=8e3;L("Softmax",(()=>{O("Performance: 50K samples, 100 features",(()=>rn(void 0,void 0,void 0,(function*(){const t=Ge(5e4,sn,!1).columns,e=t.byIndex(sn);t.remove(e.name);const n=new Qe({classesCount:e.categories.length,featuresCount:t.length});yield n.fit(t,e);const o=n.toBytes();new Qe(void 0,o).predict(t)}))),{timeout:an,benchmark:!0}),O("Correctness",(()=>rn(void 0,void 0,void 0,(function*(){const t=Ge(50,2,!0).columns,e=t.byIndex(2);t.remove(e.name);const n=new Qe({classesCount:e.categories.length,featuresCount:t.length});yield n.fit(t,e);const o=n.toBytes(),r=Ve(e,new Qe(void 0,o).predict(t));R(r>.9,!0,`Softmax failed, too small accuracy: ${r}; expected: <= 0.9`)}))),{timeout:an})})),L("XGBoost",(()=>{O("Performance: 50K samples, 100 features",(()=>rn(void 0,void 0,void 0,(function*(){const t=Ge(5e4,sn,!1).columns,e=t.byIndex(sn);t.remove(e.name);const n=new on;yield n.fit(t,e);const o=n.toBytes();new on(o).predict(t)}))),{timeout:an,benchmark:!0}),O("Correctness",(()=>rn(void 0,void 0,void 0,(function*(){const t=Ge(50,2,!0).columns,e=t.byIndex(2);t.remove(e.name);const n=new on;yield n.fit(t,e);const o=n.toBytes(),r=Ve(e,new on(o).predict(t));R(r>.9,!0,`XGBoost failed, too small accuracy: ${r}; expected: <= 0.9`)}))),{timeout:an})}));var cn=function(t,e,n,o){return new(n||(n=Promise))((function(r,s){function i(t){try{c(o.next(t))}catch(t){s(t)}}function a(t){try{c(o.throw(t))}catch(t){s(t)}}function c(t){var e;t.done?r(t.value):(e=t.value,e instanceof n?e:new n((function(t){t(e)}))).then(i,a)}c((o=o.apply(t,e||[])).next())}))};const ln=new t.Package;function un(e,n,o){return cn(this,void 0,void 0,(function*(){const r=yield P({category:e,test:n,testContext:o});return t.DataFrame.fromObjects(r)}))}})(),eda_test=o})();
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