@datagrok/bio 2.27.2 → 2.27.4

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (57) hide show
  1. package/CLAUDE.md +50 -0
  2. package/agents/package-knowledge.yaml +53 -0
  3. package/dist/455.js +1 -1
  4. package/dist/455.js.map +1 -1
  5. package/dist/682.js +1 -1
  6. package/dist/682.js.map +1 -1
  7. package/dist/705.js +1 -1
  8. package/dist/705.js.map +1 -1
  9. package/dist/909.js +2 -0
  10. package/dist/909.js.map +1 -0
  11. package/dist/immunum_bg.wasm +0 -0
  12. package/dist/package-test.js +3 -3
  13. package/dist/package-test.js.map +1 -1
  14. package/dist/package.js +3 -3
  15. package/dist/package.js.map +1 -1
  16. package/package.json +4 -2
  17. package/src/demo/bio01b-hierarchical-clustering-and-activity-cliffs.ts +24 -11
  18. package/src/package-api.ts +15 -1
  19. package/src/package-test.ts +1 -0
  20. package/src/package.g.ts +12 -1
  21. package/src/package.ts +22 -4
  22. package/src/tests/antibody-numbering-tests.ts +190 -0
  23. package/src/tests/detectors-tests.ts +5 -1
  24. package/src/tests/splitters-test.ts +8 -4
  25. package/src/tests/to-atomic-level-tests.ts +144 -0
  26. package/src/utils/annotations/numbering-ui.ts +34 -90
  27. package/src/utils/antibody-numbering/immunum-client.ts +45 -0
  28. package/src/utils/antibody-numbering/immunum-glue.js +275 -0
  29. package/src/utils/antibody-numbering/immunum.worker.ts +159 -0
  30. package/src/utils/antibody-numbering/number-antibody.ts +105 -0
  31. package/src/utils/antibody-numbering/types.ts +48 -0
  32. package/src/utils/seq-helper/seq-handler.ts +25 -9
  33. package/test-console-output-1.log +582 -485
  34. package/test-record-1.mp4 +0 -0
  35. package/webpack.config.js +13 -0
  36. package/dist/282.js +0 -2
  37. package/dist/282.js.map +0 -1
  38. package/dist/287.js +0 -2
  39. package/dist/287.js.map +0 -1
  40. package/dist/422.js +0 -2
  41. package/dist/422.js.map +0 -1
  42. package/dist/767.js +0 -2
  43. package/dist/767.js.map +0 -1
  44. package/src/utils/antibody-numbering (WIP)/alignment.ts +0 -578
  45. package/src/utils/antibody-numbering (WIP)/annotator.ts +0 -120
  46. package/src/utils/antibody-numbering (WIP)/data/blosum62.ts +0 -55
  47. package/src/utils/antibody-numbering (WIP)/data/consensus-aho.ts +0 -155
  48. package/src/utils/antibody-numbering (WIP)/data/consensus-imgt.ts +0 -162
  49. package/src/utils/antibody-numbering (WIP)/data/consensus-kabat.ts +0 -157
  50. package/src/utils/antibody-numbering (WIP)/data/consensus-martin.ts +0 -152
  51. package/src/utils/antibody-numbering (WIP)/data/consensus.ts +0 -36
  52. package/src/utils/antibody-numbering (WIP)/data/regions.ts +0 -63
  53. package/src/utils/antibody-numbering (WIP)/index.ts +0 -31
  54. package/src/utils/antibody-numbering (WIP)/testdata.ts +0 -5356
  55. package/src/utils/antibody-numbering (WIP)/types.ts +0 -69
  56. /package/dist/{8473fcbfb6e85ca6c852.wasm → wasmCluster.wasm} +0 -0
  57. /package/dist/{9a8fbf37666e32487835.wasm → wasmDbscan.wasm} +0 -0

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