@datagrok/bio 2.25.16 → 2.26.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/detectors.js +1 -7
- package/dist/242.js +1 -1
- package/dist/242.js.map +1 -1
- package/dist/282.js +2 -0
- package/dist/282.js.map +1 -0
- package/dist/284.js.map +1 -1
- package/dist/287.js +2 -0
- package/dist/287.js.map +1 -0
- package/dist/288.js +2 -0
- package/dist/288.js.map +1 -0
- package/dist/422.js +2 -0
- package/dist/422.js.map +1 -0
- package/dist/455.js +1 -1
- package/dist/455.js.map +1 -1
- package/dist/705.js +1 -1
- package/dist/705.js.map +1 -1
- package/dist/767.js +2 -0
- package/dist/767.js.map +1 -0
- package/dist/980.js.map +1 -1
- package/dist/package-test.js +5 -5
- package/dist/package-test.js.map +1 -1
- package/dist/package.js +3 -3
- package/dist/package.js.map +1 -1
- package/files/samples/antibodies.csv +494 -0
- package/package.json +3 -2
- package/projects/seq_space_demo.zip +0 -0
- package/src/package-api.ts +25 -0
- package/src/package.g.ts +22 -1
- package/src/package.ts +30 -1
- package/src/tests/detectors-tests.ts +7 -7
- package/src/utils/annotations/annotation-actions.ts +130 -0
- package/src/utils/annotations/annotation-manager-ui.ts +118 -0
- package/src/utils/annotations/annotation-manager.ts +163 -0
- package/src/utils/annotations/liability-scanner-ui.ts +88 -0
- package/src/utils/annotations/liability-scanner.ts +147 -0
- package/src/utils/annotations/numbering-ui.ts +450 -0
- package/src/utils/antibody-numbering (WIP)/alignment.ts +578 -0
- package/src/utils/antibody-numbering (WIP)/annotator.ts +120 -0
- package/src/utils/antibody-numbering (WIP)/data/blosum62.ts +55 -0
- package/src/utils/antibody-numbering (WIP)/data/consensus-aho.ts +155 -0
- package/src/utils/antibody-numbering (WIP)/data/consensus-imgt.ts +162 -0
- package/src/utils/antibody-numbering (WIP)/data/consensus-kabat.ts +157 -0
- package/src/utils/antibody-numbering (WIP)/data/consensus-martin.ts +152 -0
- package/src/utils/antibody-numbering (WIP)/data/consensus.ts +36 -0
- package/src/utils/antibody-numbering (WIP)/data/regions.ts +63 -0
- package/src/utils/antibody-numbering (WIP)/index.ts +31 -0
- package/src/utils/antibody-numbering (WIP)/testdata.ts +5356 -0
- package/src/utils/antibody-numbering (WIP)/types.ts +69 -0
- package/src/utils/context-menu.ts +42 -2
- package/src/utils/get-region-func-editor.ts +18 -2
- package/src/utils/get-region.ts +65 -1
- package/src/widgets/representations.ts +53 -2
- package/src/widgets/sequence-scrolling-widget.ts +28 -18
- package/test-console-output-1.log +505 -501
- package/test-record-1.mp4 +0 -0
- package/webpack.config.js +1 -22
package/test-record-1.mp4
CHANGED
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Binary file
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package/webpack.config.js
CHANGED
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@@ -1,28 +1,7 @@
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const path = require('path');
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const
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const FuncGeneratorPlugin = require('datagrok-tools/plugins/func-gen-plugin');
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const packageName = path.parse(require('./package.json').name).name.toLowerCase().replace(/-/g, '');
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function getDatagrokTools() {
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const pluginPath = 'datagrok-tools/plugins/func-gen-plugin';
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try {
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return require(pluginPath);
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} catch (e) {
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try {
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const globalPath = execSync('npm root -g').toString().trim();
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return require(path.join(globalPath, pluginPath));
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} catch (globalErr) {
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console.error('\n' + '='.repeat(60));
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console.error('ERROR: datagrok-tools not found!');
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console.error('To fix this, please install the tools globally by running:');
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console.error('\n npm install -g datagrok-tools\n');
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console.error('='.repeat(60) + '\n');
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process.exit(1);
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}
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}
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}
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const FuncGeneratorPlugin = getDatagrokTools();
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const mode = process.env.NODE_ENV ?? 'production';
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if (mode !== 'production')
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console.warn(`Building Bio in '${mode}' mode.`);
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