@datagrok/bio 2.18.2 → 2.18.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (10) hide show
  1. package/.eslintrc.json +1 -0
  2. package/CHANGELOG.md +4 -0
  3. package/dist/package-test.js.map +1 -1
  4. package/dist/package.js +1 -1
  5. package/dist/package.js.map +1 -1
  6. package/package.json +1 -1
  7. package/src/utils/monomer-lib/monomer-manager/duplicate-monomer-manager.ts +2 -0
  8. package/src/utils/monomer-lib/monomer-manager/monomer-manager.ts +14 -2
  9. package/test-console-output-1.log +341 -328
  10. package/test-record-1.mp4 +0 -0
package/test-console-output-1.log CHANGED
@@ -1,8 +1,8 @@
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Bio/2.18.2.X-c7c47aea/wIVPGA9E2mgN87YPEhZ7oN4XdTABYn5w/1/css/helm.css
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Bio/2.18.3.X-268c3873/76fPI9BbrspP0uKfHQ7DwEupwyEpwo2g/1/css/helm.css
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/js/common/openchemlib-full.js
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Bio/2.18.2.X-c7c47aea/wIVPGA9E2mgN87YPEhZ7oN4XdTABYn5w/1/dist/package.js
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Chem/1.13.1.X-c7c47aea/4v5gB4KDLeuIpzkYCIt27VxX4o4z9Yq6/1/dist/package.js
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Chem/1.13.1.X-c7c47aea/4v5gB4KDLeuIpzkYCIt27VxX4o4z9Yq6/1//dist/RDKit_minimal_1.2.23.wasm
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Bio/2.18.3.X-268c3873/76fPI9BbrspP0uKfHQ7DwEupwyEpwo2g/1/dist/package.js
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Chem/1.13.1.X-268c3873/TfgaiacPAuZdQSezp4uiD2sacmK3leer/1/dist/package.js
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Chem/1.13.1.X-268c3873/TfgaiacPAuZdQSezp4uiD2sacmK3leer/1//dist/RDKit_minimal_1.2.23.wasm
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  CONSOLE LOG ENTRY: RDKit module package instance was initialized
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  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
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  {
@@ -28,8 +28,8 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
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  "duplicateMonomerPreferences": {}
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  }
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fsample-lib-Aca-colored.json?&&flag=10
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
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  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
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  {
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  "exclude": [],
@@ -39,20 +39,19 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/files/Bio%2Fmonomer-sets?showFiles=true&onlyCache=false&&recursive=false&flag=9
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-sets%2Fmonomer-set-PEPTIDE.json?&&flag=9
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-sets%2Fmonomer-set-RNA.json?&&flag=9
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-sets%2F%2Fmonomer-set-RNA.json?&&flag=9
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-sets%2F%2Fmonomer-set-PEPTIDE.json?&&flag=9
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-sets%2F%2Fmonomer-set-RNA.json?&&flag=9
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/files/Bio%2Fmonomer-libraries?showFiles=true&onlyCache=false&&recursive=false&flag=10
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-sets%2F%2Fmonomer-set-PEPTIDE.json?&&flag=9
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-sets%2F%2Fmonomer-set-RNA.json?&&flag=9
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/files/Bio%2Fmonomer-sets?showFiles=true&onlyCache=false&&recursive=false&flag=9
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Bio/2.18.2.X-c7c47aea/wIVPGA9E2mgN87YPEhZ7oN4XdTABYn5w/1/dist/package-test.js
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/funcs?text=package.id%2520%253D%2520%25225e84dfb0-c210-11ef-d3b8-db69baf68dfd%2522
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/packages/published/files/Bio/2.18.3.X-268c3873/76fPI9BbrspP0uKfHQ7DwEupwyEpwo2g/1/dist/package-test.js
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/funcs?text=package.id%2520%253D%2520%2522be1a71d0-c210-11ef-f6d8-fd0a9aa59248%2522
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  CONSOLE LOG ENTRY: Running tests
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  CONSOLE LOG ENTRY: Started _first category
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  CONSOLE LOG ENTRY: Started _first _first
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- CONSOLE LOG ENTRY: Finished _first _first for 0 ms
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+ CONSOLE LOG ENTRY: Finished _first _first for 4 ms
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
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  CONSOLE LOG ENTRY: Running tests
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  CONSOLE LOG ENTRY: Started activityCliffs category
@@ -87,10 +86,11 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/images/viewers/viewers_sprite.png
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/images/entities/view_layout.svg
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/images/ribbon/ribbon_sprite.svg
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- CONSOLE LOG ENTRY: knn graph: 218.611083984375 ms
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
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+ CONSOLE LOG ENTRY: knn graph: 134.005859375 ms
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/font/Roboto-Italic.woff2
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- CONSOLE LOG ENTRY: fit: 4155.50390625 ms
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- CONSOLE LOG ENTRY: Finished activityCliffs activityCliffsOpens for 6956 ms
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+ CONSOLE LOG ENTRY: fit: 4409.044921875 ms
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+ CONSOLE LOG ENTRY: Finished activityCliffs activityCliffsOpens for 6970 ms
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/images/entities/table.svg
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/scatter-plot.md
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
@@ -107,34 +107,34 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
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  "duplicateMonomerPreferences": {}
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  }
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
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- CONSOLE LOG REQUEST: 404, http://localhost:8080/uploads/youtube/visualizations2.png
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- CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fsample-lib-Aca-colored.json?&&flag=10
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  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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+ CONSOLE LOG REQUEST: 404, http://localhost:8080/uploads/youtube/visualizations2.png
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+ CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-colors-sizes-markers-labels-thumb.png
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  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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+ CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-zoom-and-pack-thumb.png
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  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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+ CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-selection-thumb.png
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  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/scatter-plot-regression-line.png
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
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  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/group-tooltip-thumb.png
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/scatter-plot-regression-line.png
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- CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-selection-thumb.png
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- CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-zoom-and-pack-thumb.png
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- CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-colors-sizes-markers-labels-thumb.png
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- CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-labels-thumb.png
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  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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- CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-jitter-thumb.png
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- CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/scatter-plot-lines.png
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- CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/webgpu-scatterplot-thumb.png
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  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/viewers/scatter-plot-molecules.png
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+ CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-jitter-thumb.png
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  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
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  {
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  "exclude": [],
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  "explicit": [],
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  "duplicateMonomerPreferences": {}
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  }
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+ CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-labels-thumb.png
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+ CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/scatter-plot-lines.png
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+ CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/webgpu-scatterplot-thumb.png
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+ CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/viewers/scatter-plot-molecules.png
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
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  CONSOLE LOG ENTRY: Running tests
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  CONSOLE LOG ENTRY: Started activityCliffs category
@@ -166,11 +166,11 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
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  CONSOLE LOG ENTRY: Started activityCliffs activityCliffsWithEmptyRows
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2F100_3_clustests_empty_vals.csv?&&flag=9
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/datagrok.md
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- CONSOLE LOG ENTRY: knn graph: 198.51806640625 ms
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- CONSOLE LOG ENTRY: fit: 4561.6669921875 ms
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- CONSOLE LOG ENTRY: Finished activityCliffs activityCliffsWithEmptyRows for 6278 ms
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+ CONSOLE LOG ENTRY: knn graph: 113.18212890625 ms
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
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+ CONSOLE LOG ENTRY: fit: 4440.885986328125 ms
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+ CONSOLE LOG ENTRY: Finished activityCliffs activityCliffsWithEmptyRows for 6775 ms
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/scatter-plot.md
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
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  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
@@ -188,23 +188,23 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fsample-lib-Aca-colored.json?&&flag=10
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- CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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- CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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- CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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- CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
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  CONSOLE LOG REQUEST: 404, http://localhost:8080/uploads/youtube/visualizations2.png
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+ CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-colors-sizes-markers-labels-thumb.png
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- CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-zoom-and-pack-thumb.png
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- CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-selection-thumb.png
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
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  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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+ CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-zoom-and-pack-thumb.png
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+ CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-selection-thumb.png
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  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/group-tooltip-thumb.png
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+ CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-jitter-thumb.png
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+ CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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+ CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
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  CONSOLE LOG ENTRY: Started activityCliffs Helm
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- CONSOLE LOG ENTRY: Finished activityCliffs Helm for 3 ms
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+ CONSOLE LOG ENTRY: Finished activityCliffs Helm for 8 ms
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
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  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
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  CONSOLE LOG ENTRY: Started bio-substructure-filters fasta
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Ffilter_FASTA.csv?&&flag=9
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- CONSOLE LOG ENTRY: Finished bio-substructure-filters fasta for 127 ms
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+ CONSOLE LOG ENTRY: Finished bio-substructure-filters fasta for 154 ms
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  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
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  {
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  "explicit": [],
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  "duplicateMonomerPreferences": {}
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  }
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
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  CONSOLE LOG ENTRY: Running tests
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  CONSOLE LOG ENTRY: Started bio-substructure-filters category
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  "explicit": [],
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  "duplicateMonomerPreferences": {}
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
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  CONSOLE LOG ENTRY: Started bio-substructure-filters category
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  CONSOLE LOG ENTRY: Started bio-substructure-filters reopen
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Ffilter_FASTA.csv?&&flag=9
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/filters.md
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/free-text-filter-thumb.png
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/filter-thumb.png
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/hierarchical-filter-thumb.png
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- CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/text-filter-thumb.png
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/filter-checkbox-thumb.png
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/hierarchical-filter-thumb.png
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/free-text-filter-thumb.png
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/expression-filter-thumb.png
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/bool-combined-thumb.png
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/text-filter-thumb.png
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/filters-multi-values-thumb.png
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/filters-drag-column-thumb.png
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- CONSOLE LOG ENTRY: Finished bio-substructure-filters reopen for 1401 ms
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+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/datagrok.md
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+ CONSOLE LOG ENTRY: Finished bio-substructure-filters reopen for 1328 ms
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
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  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
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  {
@@ -521,7 +522,17 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
521
522
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
522
523
  CONSOLE LOG ENTRY: Started bio-substructure-filters reset-fasta
523
524
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Ffilter_FASTA.csv?&&flag=9
524
- CONSOLE LOG ENTRY: Finished bio-substructure-filters reset-fasta for 926 ms
525
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/filters.md
526
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/filter-thumb.png
527
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/filter-checkbox-thumb.png
528
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/text-filter-thumb.png
529
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/expression-filter-thumb.png
530
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/free-text-filter-thumb.png
531
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/hierarchical-filter-thumb.png
532
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/bool-combined-thumb.png
533
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/filters-multi-values-thumb.png
534
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/filters-drag-column-thumb.png
535
+ CONSOLE LOG ENTRY: Finished bio-substructure-filters reset-fasta for 737 ms
525
536
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
526
537
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
527
538
  {
@@ -576,7 +587,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
576
587
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
577
588
  CONSOLE LOG ENTRY: Started bio-substructure-filters separator
578
589
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Ffilter_MSA.csv?&&flag=9
579
- CONSOLE LOG ENTRY: Finished bio-substructure-filters separator for 521 ms
590
+ CONSOLE LOG ENTRY: Finished bio-substructure-filters separator for 370 ms
580
591
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
581
592
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
582
593
  {
@@ -599,7 +610,6 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
599
610
  "explicit": [],
600
611
  "duplicateMonomerPreferences": {}
601
612
  }
602
- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
603
613
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
604
614
  CONSOLE LOG ENTRY: Running tests
605
615
  CONSOLE LOG ENTRY: Started bio-substructure-filters category
@@ -631,7 +641,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
631
641
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
632
642
  CONSOLE LOG ENTRY: Started bio-substructure-filters sync-fasta
633
643
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Ffilter_FASTA.csv?&&flag=9
634
- CONSOLE LOG ENTRY: Finished bio-substructure-filters sync-fasta for 117 ms
644
+ CONSOLE LOG ENTRY: Finished bio-substructure-filters sync-fasta for 58 ms
635
645
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
636
646
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
637
647
  {
@@ -645,15 +655,16 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
645
655
  "explicit": [],
646
656
  "duplicateMonomerPreferences": {}
647
657
  }
648
- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
649
658
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
650
659
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fsample-lib-Aca-colored.json?&&flag=10
660
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
651
661
  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
652
662
  {
653
663
  "exclude": [],
654
664
  "explicit": [],
655
665
  "duplicateMonomerPreferences": {}
656
666
  }
667
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
657
668
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
658
669
  CONSOLE LOG ENTRY: Running tests
659
670
  CONSOLE LOG ENTRY: Started bio-substructure-filters category
@@ -684,7 +695,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
684
695
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
685
696
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
686
697
  CONSOLE LOG ENTRY: Started bio-substructure-filters sync-helm
687
- CONSOLE LOG ENTRY: Finished bio-substructure-filters sync-helm for 2 ms
698
+ CONSOLE LOG ENTRY: Finished bio-substructure-filters sync-helm for 3 ms
688
699
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
689
700
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
690
701
  {
@@ -738,7 +749,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
738
749
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
739
750
  CONSOLE LOG ENTRY: Started bio-substructure-filters sync-msa
740
751
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Ffilter_MSA.csv?&&flag=9
741
- CONSOLE LOG ENTRY: Finished bio-substructure-filters sync-msa for 44 ms
752
+ CONSOLE LOG ENTRY: Finished bio-substructure-filters sync-msa for 92 ms
742
753
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
743
754
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
744
755
  {
@@ -801,7 +812,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/hierarchical-f
801
812
  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/gifs/bool-combined-thumb.png
802
813
  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/filters-multi-values-thumb.png
803
814
  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/filters-drag-column-thumb.png
804
- CONSOLE LOG ENTRY: Finished bio-substructure-filters two-columns-fasta for 1070 ms
815
+ CONSOLE LOG ENTRY: Finished bio-substructure-filters two-columns-fasta for 922 ms
805
816
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
806
817
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
807
818
  {
@@ -883,7 +894,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
883
894
  CONSOLE LOG ENTRY: Running tests
884
895
  CONSOLE LOG ENTRY: Started bio category
885
896
  CONSOLE LOG ENTRY: Started bio testGetStatsHelm1
886
- CONSOLE LOG ENTRY: Finished bio testGetStatsHelm1 for 2 ms
897
+ CONSOLE LOG ENTRY: Finished bio testGetStatsHelm1 for 4 ms
887
898
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
888
899
  CONSOLE LOG ENTRY: Started bio-substructure-filters category
889
900
  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
@@ -933,12 +944,11 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
933
944
  "explicit": [],
934
945
  "duplicateMonomerPreferences": {}
935
946
  }
936
- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
937
947
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
938
948
  CONSOLE LOG ENTRY: Running tests
939
949
  CONSOLE LOG ENTRY: Started bio category
940
950
  CONSOLE LOG ENTRY: Started bio testGetStatsN1
941
- CONSOLE LOG ENTRY: Finished bio testGetStatsN1 for 13 ms
951
+ CONSOLE LOG ENTRY: Finished bio testGetStatsN1 for 5 ms
942
952
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
943
953
  CONSOLE LOG ENTRY: Started bio-substructure-filters category
944
954
  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
@@ -988,11 +998,12 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
988
998
  "explicit": [],
989
999
  "duplicateMonomerPreferences": {}
990
1000
  }
1001
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
991
1002
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
992
1003
  CONSOLE LOG ENTRY: Running tests
993
1004
  CONSOLE LOG ENTRY: Started bio category
994
1005
  CONSOLE LOG ENTRY: Started bio testPickupPaletteAA1
995
- CONSOLE LOG ENTRY: Finished bio testPickupPaletteAA1 for 6 ms
1006
+ CONSOLE LOG ENTRY: Finished bio testPickupPaletteAA1 for 4 ms
996
1007
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
997
1008
  CONSOLE LOG ENTRY: Started bio-substructure-filters category
998
1009
  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
@@ -1046,7 +1057,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1046
1057
  CONSOLE LOG ENTRY: Running tests
1047
1058
  CONSOLE LOG ENTRY: Started bio category
1048
1059
  CONSOLE LOG ENTRY: Started bio testPickupPaletteN1e
1049
- CONSOLE LOG ENTRY: Finished bio testPickupPaletteN1e for 6 ms
1060
+ CONSOLE LOG ENTRY: Finished bio testPickupPaletteN1e for 2 ms
1050
1061
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1051
1062
  CONSOLE LOG ENTRY: Started bio-substructure-filters category
1052
1063
  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
@@ -1100,7 +1111,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1100
1111
  CONSOLE LOG ENTRY: Running tests
1101
1112
  CONSOLE LOG ENTRY: Started bio category
1102
1113
  CONSOLE LOG ENTRY: Started bio testPickupPaletteN1
1103
- CONSOLE LOG ENTRY: Finished bio testPickupPaletteN1 for 4 ms
1114
+ CONSOLE LOG ENTRY: Finished bio testPickupPaletteN1 for 3 ms
1104
1115
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1105
1116
  CONSOLE LOG ENTRY: Started bio-substructure-filters category
1106
1117
  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
@@ -1204,25 +1215,25 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
1204
1215
  "explicit": [],
1205
1216
  "duplicateMonomerPreferences": {}
1206
1217
  }
1207
- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1208
1218
  CONSOLE LOG ENTRY: Running tests
1209
1219
  CONSOLE LOG ENTRY: Started checkInputColumn category
1220
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1210
1221
  CONSOLE LOG ENTRY: Started checkInputColumn testGetActionFunctionMeta
1211
- CONSOLE LOG ENTRY: Finished checkInputColumn testGetActionFunctionMeta for 1 ms
1222
+ CONSOLE LOG ENTRY: Finished checkInputColumn testGetActionFunctionMeta for 11 ms
1212
1223
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1213
1224
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1214
1225
  CONSOLE LOG ENTRY: Running tests
1215
1226
  CONSOLE LOG ENTRY: Started checkInputColumn category
1216
1227
  CONSOLE LOG ENTRY: Started checkInputColumn testMsaNegHelm
1217
- CONSOLE LOG ENTRY: Finished checkInputColumn testMsaNegHelm for 2 ms
1228
+ CONSOLE LOG ENTRY: Finished checkInputColumn testMsaNegHelm for 13 ms
1218
1229
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1219
- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
1220
1230
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1221
1231
  CONSOLE LOG ENTRY: Running tests
1222
1232
  CONSOLE LOG ENTRY: Started checkInputColumn category
1223
1233
  CONSOLE LOG ENTRY: Started checkInputColumn testMsaNegUN
1224
- CONSOLE LOG ENTRY: Finished checkInputColumn testMsaNegUN for 6 ms
1234
+ CONSOLE LOG ENTRY: Finished checkInputColumn testMsaNegUN for 2 ms
1225
1235
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1236
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
1226
1237
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1227
1238
  CONSOLE LOG ENTRY: Running tests
1228
1239
  CONSOLE LOG ENTRY: Started checkInputColumn category
@@ -1233,115 +1244,115 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1233
1244
  CONSOLE LOG ENTRY: Running tests
1234
1245
  CONSOLE LOG ENTRY: Started converters category
1235
1246
  CONSOLE LOG ENTRY: Started converters testFastaDnaToHelm
1236
- CONSOLE LOG ENTRY: Finished converters testFastaDnaToHelm for 29 ms
1247
+ CONSOLE LOG ENTRY: Finished converters testFastaDnaToHelm for 20 ms
1237
1248
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1238
1249
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1239
1250
  CONSOLE LOG ENTRY: Running tests
1240
1251
  CONSOLE LOG ENTRY: Started converters category
1241
1252
  CONSOLE LOG ENTRY: Started converters testFastaDnaToSeparator
1242
- CONSOLE LOG ENTRY: Finished converters testFastaDnaToSeparator for 25 ms
1253
+ CONSOLE LOG ENTRY: Finished converters testFastaDnaToSeparator for 20 ms
1243
1254
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1244
1255
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1245
1256
  CONSOLE LOG ENTRY: Running tests
1246
1257
  CONSOLE LOG ENTRY: Started converters category
1247
1258
  CONSOLE LOG ENTRY: Started converters testFastaGapsToHelm
1248
- CONSOLE LOG ENTRY: Finished converters testFastaGapsToHelm for 26 ms
1259
+ CONSOLE LOG ENTRY: Finished converters testFastaGapsToHelm for 24 ms
1249
1260
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1250
1261
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1251
1262
  CONSOLE LOG ENTRY: Running tests
1252
1263
  CONSOLE LOG ENTRY: Started converters category
1253
1264
  CONSOLE LOG ENTRY: Started converters testFastaGapsToSeparator
1254
- CONSOLE LOG ENTRY: Finished converters testFastaGapsToSeparator for 20 ms
1265
+ CONSOLE LOG ENTRY: Finished converters testFastaGapsToSeparator for 33 ms
1255
1266
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1256
1267
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1257
1268
  CONSOLE LOG ENTRY: Running tests
1258
1269
  CONSOLE LOG ENTRY: Started converters category
1259
1270
  CONSOLE LOG ENTRY: Started converters testFastaPtToHelm
1260
- CONSOLE LOG ENTRY: Finished converters testFastaPtToHelm for 34 ms
1271
+ CONSOLE LOG ENTRY: Finished converters testFastaPtToHelm for 32 ms
1261
1272
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1262
1273
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1263
1274
  CONSOLE LOG ENTRY: Running tests
1264
1275
  CONSOLE LOG ENTRY: Started converters category
1265
1276
  CONSOLE LOG ENTRY: Started converters testFastaPtToSeparator
1266
- CONSOLE LOG ENTRY: Finished converters testFastaPtToSeparator for 17 ms
1277
+ CONSOLE LOG ENTRY: Finished converters testFastaPtToSeparator for 15 ms
1267
1278
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1268
1279
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1269
1280
  CONSOLE LOG ENTRY: Running tests
1270
1281
  CONSOLE LOG ENTRY: Started converters category
1271
1282
  CONSOLE LOG ENTRY: Started converters testFastaRnaToHelm
1272
- CONSOLE LOG ENTRY: Finished converters testFastaRnaToHelm for 11 ms
1283
+ CONSOLE LOG ENTRY: Finished converters testFastaRnaToHelm for 47 ms
1273
1284
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1274
1285
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1275
1286
  CONSOLE LOG ENTRY: Running tests
1276
1287
  CONSOLE LOG ENTRY: Started converters category
1277
1288
  CONSOLE LOG ENTRY: Started converters testFastaRnaToSeparator
1278
- CONSOLE LOG ENTRY: Finished converters testFastaRnaToSeparator for 22 ms
1289
+ CONSOLE LOG ENTRY: Finished converters testFastaRnaToSeparator for 19 ms
1279
1290
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1280
1291
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1281
1292
  CONSOLE LOG ENTRY: Running tests
1282
1293
  CONSOLE LOG ENTRY: Started converters category
1283
1294
  CONSOLE LOG ENTRY: Started converters testFastaUnToSeparator
1284
- CONSOLE LOG ENTRY: Finished converters testFastaUnToSeparator for 30 ms
1295
+ CONSOLE LOG ENTRY: Finished converters testFastaUnToSeparator for 22 ms
1285
1296
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1286
1297
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1287
1298
  CONSOLE LOG ENTRY: Running tests
1288
1299
  CONSOLE LOG ENTRY: Started converters category
1289
1300
  CONSOLE LOG ENTRY: Started converters testHelmDnaToFasta
1290
- CONSOLE LOG ENTRY: Finished converters testHelmDnaToFasta for 25 ms
1301
+ CONSOLE LOG ENTRY: Finished converters testHelmDnaToFasta for 41 ms
1291
1302
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1292
1303
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1293
1304
  CONSOLE LOG ENTRY: Running tests
1294
1305
  CONSOLE LOG ENTRY: Started converters category
1295
1306
  CONSOLE LOG ENTRY: Started converters testHelmDnaToSeparator
1296
- CONSOLE LOG ENTRY: Finished converters testHelmDnaToSeparator for 13 ms
1307
+ CONSOLE LOG ENTRY: Finished converters testHelmDnaToSeparator for 16 ms
1297
1308
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1298
1309
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1299
1310
  CONSOLE LOG ENTRY: Running tests
1300
1311
  CONSOLE LOG ENTRY: Started converters category
1301
1312
  CONSOLE LOG ENTRY: Started converters testHelmLoneDeoxyribose
1302
- CONSOLE LOG ENTRY: Finished converters testHelmLoneDeoxyribose for 25 ms
1313
+ CONSOLE LOG ENTRY: Finished converters testHelmLoneDeoxyribose for 21 ms
1303
1314
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1304
1315
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1305
1316
  CONSOLE LOG ENTRY: Running tests
1306
1317
  CONSOLE LOG ENTRY: Started converters category
1307
1318
  CONSOLE LOG ENTRY: Started converters testHelmLonePhosphorus
1308
- CONSOLE LOG ENTRY: Finished converters testHelmLonePhosphorus for 34 ms
1319
+ CONSOLE LOG ENTRY: Finished converters testHelmLonePhosphorus for 17 ms
1309
1320
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1310
1321
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1311
1322
  CONSOLE LOG ENTRY: Running tests
1312
1323
  CONSOLE LOG ENTRY: Started converters category
1313
1324
  CONSOLE LOG ENTRY: Started converters testHelmLoneRibose
1314
- CONSOLE LOG ENTRY: Finished converters testHelmLoneRibose for 31 ms
1325
+ CONSOLE LOG ENTRY: Finished converters testHelmLoneRibose for 14 ms
1315
1326
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1316
1327
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1317
1328
  CONSOLE LOG ENTRY: Running tests
1318
1329
  CONSOLE LOG ENTRY: Started converters category
1319
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  CONSOLE LOG ENTRY: Started converters testHelmPtToFasta
1320
- CONSOLE LOG ENTRY: Finished converters testHelmPtToFasta for 28 ms
1331
+ CONSOLE LOG ENTRY: Finished converters testHelmPtToFasta for 13 ms
1321
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1322
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1323
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  CONSOLE LOG ENTRY: Running tests
1324
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  CONSOLE LOG ENTRY: Started converters category
1325
1336
  CONSOLE LOG ENTRY: Started converters testHelmPtToSeparator
1326
- CONSOLE LOG ENTRY: Finished converters testHelmPtToSeparator for 46 ms
1337
+ CONSOLE LOG ENTRY: Finished converters testHelmPtToSeparator for 104 ms
1327
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1328
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1329
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  CONSOLE LOG ENTRY: Running tests
1330
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  CONSOLE LOG ENTRY: Started converters category
1331
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  CONSOLE LOG ENTRY: Started converters testHelmRnaToFasta
1332
- CONSOLE LOG ENTRY: Finished converters testHelmRnaToFasta for 12 ms
1343
+ CONSOLE LOG ENTRY: Finished converters testHelmRnaToFasta for 17 ms
1333
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1334
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1335
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  CONSOLE LOG ENTRY: Running tests
1336
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  CONSOLE LOG ENTRY: Started converters category
1337
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  CONSOLE LOG ENTRY: Started converters testHelmRnaToSeparator
1338
- CONSOLE LOG ENTRY: Finished converters testHelmRnaToSeparator for 38 ms
1349
+ CONSOLE LOG ENTRY: Finished converters testHelmRnaToSeparator for 13 ms
1339
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1340
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1341
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  CONSOLE LOG ENTRY: Running tests
1342
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  CONSOLE LOG ENTRY: Started converters category
1343
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  CONSOLE LOG ENTRY: Started converters testHelmUnToFasta
1344
- CONSOLE LOG ENTRY: Finished converters testHelmUnToFasta for 27 ms
1355
+ CONSOLE LOG ENTRY: Finished converters testHelmUnToFasta for 17 ms
1345
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1346
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1347
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  CONSOLE LOG ENTRY: Running tests
@@ -1353,55 +1364,55 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1353
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  CONSOLE LOG ENTRY: Running tests
1354
1365
  CONSOLE LOG ENTRY: Started converters category
1355
1366
  CONSOLE LOG ENTRY: Started converters testSeparatorDnaToFasta
1356
- CONSOLE LOG ENTRY: Finished converters testSeparatorDnaToFasta for 14 ms
1367
+ CONSOLE LOG ENTRY: Finished converters testSeparatorDnaToFasta for 18 ms
1357
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1358
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1359
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  CONSOLE LOG ENTRY: Running tests
1360
1371
  CONSOLE LOG ENTRY: Started converters category
1361
1372
  CONSOLE LOG ENTRY: Started converters testSeparatorDnaToHelm
1362
- CONSOLE LOG ENTRY: Finished converters testSeparatorDnaToHelm for 31 ms
1373
+ CONSOLE LOG ENTRY: Finished converters testSeparatorDnaToHelm for 10 ms
1363
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1364
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1365
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  CONSOLE LOG ENTRY: Running tests
1366
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  CONSOLE LOG ENTRY: Started converters category
1367
1378
  CONSOLE LOG ENTRY: Started converters testSeparatorGapsToFasta
1368
- CONSOLE LOG ENTRY: Finished converters testSeparatorGapsToFasta for 14 ms
1379
+ CONSOLE LOG ENTRY: Finished converters testSeparatorGapsToFasta for 26 ms
1369
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1370
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
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  CONSOLE LOG ENTRY: Running tests
1372
1383
  CONSOLE LOG ENTRY: Started converters category
1373
1384
  CONSOLE LOG ENTRY: Started converters testSeparatorGapsToHelm
1374
- CONSOLE LOG ENTRY: Finished converters testSeparatorGapsToHelm for 38 ms
1385
+ CONSOLE LOG ENTRY: Finished converters testSeparatorGapsToHelm for 27 ms
1375
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1376
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1377
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  CONSOLE LOG ENTRY: Running tests
1378
1389
  CONSOLE LOG ENTRY: Started converters category
1379
1390
  CONSOLE LOG ENTRY: Started converters testSeparatorPtToFasta
1380
- CONSOLE LOG ENTRY: Finished converters testSeparatorPtToFasta for 17 ms
1391
+ CONSOLE LOG ENTRY: Finished converters testSeparatorPtToFasta for 50 ms
1381
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1382
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1383
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  CONSOLE LOG ENTRY: Running tests
1384
1395
  CONSOLE LOG ENTRY: Started converters category
1385
1396
  CONSOLE LOG ENTRY: Started converters testSeparatorPtToHelm
1386
- CONSOLE LOG ENTRY: Finished converters testSeparatorPtToHelm for 93 ms
1397
+ CONSOLE LOG ENTRY: Finished converters testSeparatorPtToHelm for 24 ms
1387
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1388
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1389
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  CONSOLE LOG ENTRY: Running tests
1390
1401
  CONSOLE LOG ENTRY: Started converters category
1391
1402
  CONSOLE LOG ENTRY: Started converters testSeparatorRnaToFasta
1392
- CONSOLE LOG ENTRY: Finished converters testSeparatorRnaToFasta for 32 ms
1403
+ CONSOLE LOG ENTRY: Finished converters testSeparatorRnaToFasta for 27 ms
1393
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1394
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1395
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  CONSOLE LOG ENTRY: Running tests
1396
1407
  CONSOLE LOG ENTRY: Started converters category
1397
1408
  CONSOLE LOG ENTRY: Started converters testSeparatorRnaToHelm
1398
- CONSOLE LOG ENTRY: Finished converters testSeparatorRnaToHelm for 19 ms
1409
+ CONSOLE LOG ENTRY: Finished converters testSeparatorRnaToHelm for 28 ms
1399
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1400
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1401
1412
  CONSOLE LOG ENTRY: Running tests
1402
1413
  CONSOLE LOG ENTRY: Started converters category
1403
1414
  CONSOLE LOG ENTRY: Started converters testSeparatorUnToFasta
1404
- CONSOLE LOG ENTRY: Finished converters testSeparatorUnToFasta for 20 ms
1415
+ CONSOLE LOG ENTRY: Finished converters testSeparatorUnToFasta for 31 ms
1405
1416
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1406
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1407
1418
  CONSOLE LOG ENTRY: Running tests
@@ -1427,7 +1438,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1427
1438
  CONSOLE LOG ENTRY: Running tests
1428
1439
  CONSOLE LOG ENTRY: Started detectors category
1429
1440
  CONSOLE LOG ENTRY: Started detectors csvData2-fastaExtSameLength
1430
- CONSOLE LOG ENTRY: Finished detectors csvData2-fastaExtSameLength for 30 ms
1441
+ CONSOLE LOG ENTRY: Finished detectors csvData2-fastaExtSameLength for 21 ms
1431
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1432
1443
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1433
1444
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1436,7 +1447,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1436
1447
  CONSOLE LOG ENTRY: Running tests
1437
1448
  CONSOLE LOG ENTRY: Started detectors category
1438
1449
  CONSOLE LOG ENTRY: Started detectors csvData2-fastaMsaExtManyMinus
1439
- CONSOLE LOG ENTRY: Finished detectors csvData2-fastaMsaExtManyMinus for 12 ms
1450
+ CONSOLE LOG ENTRY: Finished detectors csvData2-fastaMsaExtManyMinus for 28 ms
1440
1451
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1441
1452
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1442
1453
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1445,7 +1456,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1445
1456
  CONSOLE LOG ENTRY: Running tests
1446
1457
  CONSOLE LOG ENTRY: Started detectors category
1447
1458
  CONSOLE LOG ENTRY: Started detectors csvData2-fastaMsaExtSameLength
1448
- CONSOLE LOG ENTRY: Finished detectors csvData2-fastaMsaExtSameLength for 16 ms
1459
+ CONSOLE LOG ENTRY: Finished detectors csvData2-fastaMsaExtSameLength for 15 ms
1449
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1450
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  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1451
1462
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1454,7 +1465,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1454
1465
  CONSOLE LOG ENTRY: Running tests
1455
1466
  CONSOLE LOG ENTRY: Started detectors category
1456
1467
  CONSOLE LOG ENTRY: Started detectors csvData2-fastaMsaSameLength
1457
- CONSOLE LOG ENTRY: Finished detectors csvData2-fastaMsaSameLength for 26 ms
1468
+ CONSOLE LOG ENTRY: Finished detectors csvData2-fastaMsaSameLength for 18 ms
1458
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1459
1470
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1460
1471
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1463,7 +1474,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1463
1474
  CONSOLE LOG ENTRY: Running tests
1464
1475
  CONSOLE LOG ENTRY: Started detectors category
1465
1476
  CONSOLE LOG ENTRY: Started detectors csvData2-fastaNonDigitAlphabet
1466
- CONSOLE LOG ENTRY: Finished detectors csvData2-fastaNonDigitAlphabet for 10 ms
1477
+ CONSOLE LOG ENTRY: Finished detectors csvData2-fastaNonDigitAlphabet for 18 ms
1467
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1468
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  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1469
1480
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1472,7 +1483,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1472
1483
  CONSOLE LOG ENTRY: Running tests
1473
1484
  CONSOLE LOG ENTRY: Started detectors category
1474
1485
  CONSOLE LOG ENTRY: Started detectors csvData2-helmSameLength
1475
- CONSOLE LOG ENTRY: Finished detectors csvData2-helmSameLength for 13 ms
1486
+ CONSOLE LOG ENTRY: Finished detectors csvData2-helmSameLength for 18 ms
1476
1487
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1477
1488
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1478
1489
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1481,7 +1492,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1481
1492
  CONSOLE LOG ENTRY: Running tests
1482
1493
  CONSOLE LOG ENTRY: Started detectors category
1483
1494
  CONSOLE LOG ENTRY: Started detectors csvData2-negEmpty
1484
- CONSOLE LOG ENTRY: Finished detectors csvData2-negEmpty for 10 ms
1495
+ CONSOLE LOG ENTRY: Finished detectors csvData2-negEmpty for 12 ms
1485
1496
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1486
1497
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1487
1498
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1490,7 +1501,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1490
1501
  CONSOLE LOG ENTRY: Running tests
1491
1502
  CONSOLE LOG ENTRY: Started detectors category
1492
1503
  CONSOLE LOG ENTRY: Started detectors csvData2-negFastaUnSingleChar
1493
- CONSOLE LOG ENTRY: Finished detectors csvData2-negFastaUnSingleChar for 15 ms
1504
+ CONSOLE LOG ENTRY: Finished detectors csvData2-negFastaUnSingleChar for 24 ms
1494
1505
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1495
1506
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1496
1507
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1499,7 +1510,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1499
1510
  CONSOLE LOG ENTRY: Running tests
1500
1511
  CONSOLE LOG ENTRY: Started detectors category
1501
1512
  CONSOLE LOG ENTRY: Started detectors csvData2-negNum1
1502
- CONSOLE LOG ENTRY: Finished detectors csvData2-negNum1 for 13 ms
1513
+ CONSOLE LOG ENTRY: Finished detectors csvData2-negNum1 for 17 ms
1503
1514
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1504
1515
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1505
1516
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1508,7 +1519,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1508
1519
  CONSOLE LOG ENTRY: Running tests
1509
1520
  CONSOLE LOG ENTRY: Started detectors category
1510
1521
  CONSOLE LOG ENTRY: Started detectors csvData2-negNum2
1511
- CONSOLE LOG ENTRY: Finished detectors csvData2-negNum2 for 13 ms
1522
+ CONSOLE LOG ENTRY: Finished detectors csvData2-negNum2 for 14 ms
1512
1523
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1513
1524
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1514
1525
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1517,7 +1528,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1517
1528
  CONSOLE LOG ENTRY: Running tests
1518
1529
  CONSOLE LOG ENTRY: Started detectors category
1519
1530
  CONSOLE LOG ENTRY: Started detectors csvData2-negNum3
1520
- CONSOLE LOG ENTRY: Finished detectors csvData2-negNum3 for 14 ms
1531
+ CONSOLE LOG ENTRY: Finished detectors csvData2-negNum3 for 21 ms
1521
1532
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1522
1533
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1523
1534
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1526,7 +1537,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1526
1537
  CONSOLE LOG ENTRY: Running tests
1527
1538
  CONSOLE LOG ENTRY: Started detectors category
1528
1539
  CONSOLE LOG ENTRY: Started detectors csvData2-negSmiles
1529
- CONSOLE LOG ENTRY: Finished detectors csvData2-negSmiles for 163 ms
1540
+ CONSOLE LOG ENTRY: Finished detectors csvData2-negSmiles for 162 ms
1530
1541
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1531
1542
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1532
1543
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1535,7 +1546,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1535
1546
  CONSOLE LOG ENTRY: Running tests
1536
1547
  CONSOLE LOG ENTRY: Started detectors category
1537
1548
  CONSOLE LOG ENTRY: Started detectors csvData2-negSmilesWithSquareBrackets
1538
- CONSOLE LOG ENTRY: Finished detectors csvData2-negSmilesWithSquareBrackets for 20 ms
1549
+ CONSOLE LOG ENTRY: Finished detectors csvData2-negSmilesWithSquareBrackets for 22 ms
1539
1550
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1540
1551
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1541
1552
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1544,7 +1555,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1544
1555
  CONSOLE LOG ENTRY: Running tests
1545
1556
  CONSOLE LOG ENTRY: Started detectors category
1546
1557
  CONSOLE LOG ENTRY: Started detectors csvData2-sepMsaSameLength
1547
- CONSOLE LOG ENTRY: Finished detectors csvData2-sepMsaSameLength for 15 ms
1558
+ CONSOLE LOG ENTRY: Finished detectors csvData2-sepMsaSameLength for 16 ms
1548
1559
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1549
1560
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1550
1561
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1553,7 +1564,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1553
1564
  CONSOLE LOG ENTRY: Running tests
1554
1565
  CONSOLE LOG ENTRY: Started detectors category
1555
1566
  CONSOLE LOG ENTRY: Started detectors csvData2-sepSameLength
1556
- CONSOLE LOG ENTRY: Finished detectors csvData2-sepSameLength for 14 ms
1567
+ CONSOLE LOG ENTRY: Finished detectors csvData2-sepSameLength for 17 ms
1557
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1558
1569
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1559
1570
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1566,13 +1577,13 @@ CONSOLE LOG ENTRY: Started detectorsBenchmark category
1566
1577
  CONSOLE LOG ENTRY: Started Detectors category
1567
1578
  CONSOLE LOG ENTRY: Started Detectors detectMacromolecule
1568
1579
  CONSOLE LOG ENTRY: System:AppData/Bio/undefined
1569
- CONSOLE LOG ENTRY: Finished Detectors detectMacromolecule for 41 ms
1580
+ CONSOLE LOG ENTRY: Finished Detectors detectMacromolecule for 24 ms
1570
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1571
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1572
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  CONSOLE LOG ENTRY: Running tests
1573
1584
  CONSOLE LOG ENTRY: Started detectors category
1574
1585
  CONSOLE LOG ENTRY: Started detectors FastaDna1
1575
- CONSOLE LOG ENTRY: Finished detectors FastaDna1 for 15 ms
1586
+ CONSOLE LOG ENTRY: Finished detectors FastaDna1 for 17 ms
1576
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1577
1588
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1578
1589
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1581,7 +1592,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1581
1592
  CONSOLE LOG ENTRY: Running tests
1582
1593
  CONSOLE LOG ENTRY: Started detectors category
1583
1594
  CONSOLE LOG ENTRY: Started detectors FastaMsaDna1
1584
- CONSOLE LOG ENTRY: Finished detectors FastaMsaDna1 for 15 ms
1595
+ CONSOLE LOG ENTRY: Finished detectors FastaMsaDna1 for 14 ms
1585
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1586
1597
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1587
1598
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1590,7 +1601,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1590
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  CONSOLE LOG ENTRY: Running tests
1591
1602
  CONSOLE LOG ENTRY: Started detectors category
1592
1603
  CONSOLE LOG ENTRY: Started detectors FastaMsaPt1
1593
- CONSOLE LOG ENTRY: Finished detectors FastaMsaPt1 for 13 ms
1604
+ CONSOLE LOG ENTRY: Finished detectors FastaMsaPt1 for 16 ms
1594
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1595
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  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1596
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  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1599,7 +1610,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1599
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  CONSOLE LOG ENTRY: Running tests
1600
1611
  CONSOLE LOG ENTRY: Started detectors category
1601
1612
  CONSOLE LOG ENTRY: Started detectors FastaPt1
1602
- CONSOLE LOG ENTRY: Finished detectors FastaPt1 for 15 ms
1613
+ CONSOLE LOG ENTRY: Finished detectors FastaPt1 for 22 ms
1603
1614
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1604
1615
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1605
1616
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1608,7 +1619,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1608
1619
  CONSOLE LOG ENTRY: Running tests
1609
1620
  CONSOLE LOG ENTRY: Started detectors category
1610
1621
  CONSOLE LOG ENTRY: Started detectors FastaPtGapsMsa
1611
- CONSOLE LOG ENTRY: Finished detectors FastaPtGapsMsa for 7 ms
1622
+ CONSOLE LOG ENTRY: Finished detectors FastaPtGapsMsa for 6 ms
1612
1623
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1613
1624
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1614
1625
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1626,7 +1637,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1626
1637
  CONSOLE LOG ENTRY: Running tests
1627
1638
  CONSOLE LOG ENTRY: Started detectors category
1628
1639
  CONSOLE LOG ENTRY: Started detectors FastaRna1
1629
- CONSOLE LOG ENTRY: Finished detectors FastaRna1 for 15 ms
1640
+ CONSOLE LOG ENTRY: Finished detectors FastaRna1 for 19 ms
1630
1641
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1631
1642
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1632
1643
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1635,7 +1646,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1635
1646
  CONSOLE LOG ENTRY: Running tests
1636
1647
  CONSOLE LOG ENTRY: Started detectors category
1637
1648
  CONSOLE LOG ENTRY: Started detectors FastaUn
1638
- CONSOLE LOG ENTRY: Finished detectors FastaUn for 25 ms
1649
+ CONSOLE LOG ENTRY: Finished detectors FastaUn for 19 ms
1639
1650
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1640
1651
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1641
1652
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1644,7 +1655,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1644
1655
  CONSOLE LOG ENTRY: Running tests
1645
1656
  CONSOLE LOG ENTRY: Started detectors category
1646
1657
  CONSOLE LOG ENTRY: Started detectors NegativeStartEndIntermediate
1647
- CONSOLE LOG ENTRY: Finished detectors NegativeStartEndIntermediate for 8 ms
1658
+ CONSOLE LOG ENTRY: Finished detectors NegativeStartEndIntermediate for 7 ms
1648
1659
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1649
1660
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1650
1661
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1653,7 +1664,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1653
1664
  CONSOLE LOG ENTRY: Running tests
1654
1665
  CONSOLE LOG ENTRY: Started detectors category
1655
1666
  CONSOLE LOG ENTRY: Started detectors NegativeStartEnd
1656
- CONSOLE LOG ENTRY: Finished detectors NegativeStartEnd for 6 ms
1667
+ CONSOLE LOG ENTRY: Finished detectors NegativeStartEnd for 11 ms
1657
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1658
1669
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1659
1670
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1663,7 +1674,7 @@ CONSOLE LOG ENTRY: Running tests
1663
1674
  CONSOLE LOG ENTRY: Started detectors category
1664
1675
  CONSOLE LOG ENTRY: Started detectors samplesFastaCsv
1665
1676
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fsamples%2FFASTA.csv?&&flag=9
1666
- CONSOLE LOG ENTRY: Finished detectors samplesFastaCsv for 94 ms
1677
+ CONSOLE LOG ENTRY: Finished detectors samplesFastaCsv for 111 ms
1667
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1668
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  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1669
1680
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1673,7 +1684,7 @@ CONSOLE LOG ENTRY: Running tests
1673
1684
  CONSOLE LOG ENTRY: Started detectors category
1674
1685
  CONSOLE LOG ENTRY: Started detectors samplesFastaNegativeWords
1675
1686
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Ffasta_negative_words.csv?&&flag=9
1676
- CONSOLE LOG ENTRY: Finished detectors samplesFastaNegativeWords for 104 ms
1687
+ CONSOLE LOG ENTRY: Finished detectors samplesFastaNegativeWords for 69 ms
1677
1688
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1678
1689
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1679
1690
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1683,7 +1694,7 @@ CONSOLE LOG ENTRY: Running tests
1683
1694
  CONSOLE LOG ENTRY: Started detectors category
1684
1695
  CONSOLE LOG ENTRY: Started detectors samplesFastaPtCsv
1685
1696
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fsamples%2FFASTA_PT.csv?&&flag=9
1686
- CONSOLE LOG ENTRY: Finished detectors samplesFastaPtCsv for 31 ms
1697
+ CONSOLE LOG ENTRY: Finished detectors samplesFastaPtCsv for 94 ms
1687
1698
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1688
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  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1689
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  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1693,7 +1704,7 @@ CONSOLE LOG ENTRY: Running tests
1693
1704
  CONSOLE LOG ENTRY: Started detectors category
1694
1705
  CONSOLE LOG ENTRY: Started detectors samplesHelmCsv
1695
1706
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fsamples%2FHELM.csv?&&flag=9
1696
- CONSOLE LOG ENTRY: Finished detectors samplesHelmCsv for 41 ms
1707
+ CONSOLE LOG ENTRY: Finished detectors samplesHelmCsv for 86 ms
1697
1708
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1698
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  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1699
1710
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1703,7 +1714,7 @@ CONSOLE LOG ENTRY: Running tests
1703
1714
  CONSOLE LOG ENTRY: Started detectors category
1704
1715
  CONSOLE LOG ENTRY: Started detectors samplesIdCsv
1705
1716
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2FtestId.csv?&&flag=9
1706
- CONSOLE LOG ENTRY: Finished detectors samplesIdCsv for 71 ms
1717
+ CONSOLE LOG ENTRY: Finished detectors samplesIdCsv for 22 ms
1707
1718
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1708
1719
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1709
1720
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1713,7 +1724,7 @@ CONSOLE LOG ENTRY: Running tests
1713
1724
  CONSOLE LOG ENTRY: Started detectors category
1714
1725
  CONSOLE LOG ENTRY: Started detectors samplesMsaComplex
1715
1726
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fsamples%2FMSA.csv?&&flag=9
1716
- CONSOLE LOG ENTRY: Finished detectors samplesMsaComplex for 34 ms
1727
+ CONSOLE LOG ENTRY: Finished detectors samplesMsaComplex for 47 ms
1717
1728
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1718
1729
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1719
1730
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1723,7 +1734,7 @@ CONSOLE LOG ENTRY: Running tests
1723
1734
  CONSOLE LOG ENTRY: Started detectors category
1724
1735
  CONSOLE LOG ENTRY: Started detectors samplesPeptidesComplex
1725
1736
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fpeptides_complex_msa.csv?&&flag=9
1726
- CONSOLE LOG ENTRY: Finished detectors samplesPeptidesComplex for 171 ms
1737
+ CONSOLE LOG ENTRY: Finished detectors samplesPeptidesComplex for 199 ms
1727
1738
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1728
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  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1729
1740
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1733,7 +1744,7 @@ CONSOLE LOG ENTRY: Running tests
1733
1744
  CONSOLE LOG ENTRY: Started detectors category
1734
1745
  CONSOLE LOG ENTRY: Started detectors samplesSarSmallCsv
1735
1746
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2FtestSmiles.csv?&&flag=9
1736
- CONSOLE LOG ENTRY: Finished detectors samplesSarSmallCsv for 25 ms
1747
+ CONSOLE LOG ENTRY: Finished detectors samplesSarSmallCsv for 57 ms
1737
1748
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1738
1749
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1739
1750
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1743,7 +1754,7 @@ CONSOLE LOG ENTRY: Running tests
1743
1754
  CONSOLE LOG ENTRY: Started detectors category
1744
1755
  CONSOLE LOG ENTRY: Started detectors samplesTestActivityCliffsNegativeSmiles
1745
1756
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2FtestActivityCliffs.csv?&&flag=9
1746
- CONSOLE LOG ENTRY: Finished detectors samplesTestActivityCliffsNegativeSmiles for 30 ms
1757
+ CONSOLE LOG ENTRY: Finished detectors samplesTestActivityCliffsNegativeSmiles for 56 ms
1747
1758
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1748
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  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1749
1760
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1753,7 +1764,7 @@ CONSOLE LOG ENTRY: Running tests
1753
1764
  CONSOLE LOG ENTRY: Started detectors category
1754
1765
  CONSOLE LOG ENTRY: Started detectors samplesTestAlertCollection
1755
1766
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2FtestAlertCollection.csv?&&flag=9
1756
- CONSOLE LOG ENTRY: Finished detectors samplesTestAlertCollection for 47 ms
1767
+ CONSOLE LOG ENTRY: Finished detectors samplesTestAlertCollection for 54 ms
1757
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1758
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  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1759
1770
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1763,7 +1774,7 @@ CONSOLE LOG ENTRY: Running tests
1763
1774
  CONSOLE LOG ENTRY: Started detectors category
1764
1775
  CONSOLE LOG ENTRY: Started detectors samplesTestCerealCsv
1765
1776
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2FtestCereal.csv?&&flag=9
1766
- CONSOLE LOG ENTRY: Finished detectors samplesTestCerealCsv for 55 ms
1777
+ CONSOLE LOG ENTRY: Finished detectors samplesTestCerealCsv for 65 ms
1767
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1768
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  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1769
1780
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1773,7 +1784,7 @@ CONSOLE LOG ENTRY: Running tests
1773
1784
  CONSOLE LOG ENTRY: Started detectors category
1774
1785
  CONSOLE LOG ENTRY: Started detectors samplesTestDemogCsv
1775
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2FtestDemog.csv?&&flag=9
1776
- CONSOLE LOG ENTRY: Finished detectors samplesTestDemogCsv for 229 ms
1787
+ CONSOLE LOG ENTRY: Finished detectors samplesTestDemogCsv for 209 ms
1777
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1778
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  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1779
1790
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1783,7 +1794,7 @@ CONSOLE LOG ENTRY: Running tests
1783
1794
  CONSOLE LOG ENTRY: Started detectors category
1784
1795
  CONSOLE LOG ENTRY: Started detectors samplesTestDmvOffices
1785
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2FtestDmvOffices.csv?&&flag=9
1786
- CONSOLE LOG ENTRY: Finished detectors samplesTestDmvOffices for 120 ms
1797
+ CONSOLE LOG ENTRY: Finished detectors samplesTestDmvOffices for 112 ms
1787
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1788
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  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1789
1800
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1793,7 +1804,7 @@ CONSOLE LOG ENTRY: Running tests
1793
1804
  CONSOLE LOG ENTRY: Started detectors category
1794
1805
  CONSOLE LOG ENTRY: Started detectors samplesTestHelmCsv
1795
1806
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2FtestHelm.csv?&&flag=9
1796
- CONSOLE LOG ENTRY: Finished detectors samplesTestHelmCsv for 43 ms
1807
+ CONSOLE LOG ENTRY: Finished detectors samplesTestHelmCsv for 35 ms
1797
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1798
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  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1799
1810
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1803,7 +1814,7 @@ CONSOLE LOG ENTRY: Running tests
1803
1814
  CONSOLE LOG ENTRY: Started detectors category
1804
1815
  CONSOLE LOG ENTRY: Started detectors samplesTestSmiles2Csv
1805
1816
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2FtestSmiles2.csv?&&flag=9
1806
- CONSOLE LOG ENTRY: Finished detectors samplesTestSmiles2Csv for 70 ms
1817
+ CONSOLE LOG ENTRY: Finished detectors samplesTestSmiles2Csv for 87 ms
1807
1818
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1808
1819
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1809
1820
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1813,7 +1824,7 @@ CONSOLE LOG ENTRY: Running tests
1813
1824
  CONSOLE LOG ENTRY: Started detectors category
1814
1825
  CONSOLE LOG ENTRY: Started detectors samplesTestSmilesShort
1815
1826
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2FtestSmilesShort.csv?&&flag=9
1816
- CONSOLE LOG ENTRY: Finished detectors samplesTestSmilesShort for 44 ms
1827
+ CONSOLE LOG ENTRY: Finished detectors samplesTestSmilesShort for 24 ms
1817
1828
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1818
1829
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1819
1830
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1823,7 +1834,7 @@ CONSOLE LOG ENTRY: Running tests
1823
1834
  CONSOLE LOG ENTRY: Started detectors category
1824
1835
  CONSOLE LOG ENTRY: Started detectors samplesTestSpgi100
1825
1836
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2FtestSpgi100.csv?&&flag=9
1826
- CONSOLE LOG ENTRY: Finished detectors samplesTestSpgi100 for 279 ms
1837
+ CONSOLE LOG ENTRY: Finished detectors samplesTestSpgi100 for 265 ms
1827
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1828
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  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1829
1840
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1833,7 +1844,7 @@ CONSOLE LOG ENTRY: Running tests
1833
1844
  CONSOLE LOG ENTRY: Started detectors category
1834
1845
  CONSOLE LOG ENTRY: Started detectors samplesTestSpgi
1835
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2FSPGI-derived.csv?&&flag=9
1836
- CONSOLE LOG ENTRY: Finished detectors samplesTestSpgi for 22 ms
1847
+ CONSOLE LOG ENTRY: Finished detectors samplesTestSpgi for 21 ms
1837
1848
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1838
1849
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1839
1850
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1843,7 +1854,7 @@ CONSOLE LOG ENTRY: Running tests
1843
1854
  CONSOLE LOG ENTRY: Started detectors category
1844
1855
  CONSOLE LOG ENTRY: Started detectors samplesTestUnichemSources
1845
1856
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2FtestUnichemSources.csv?&&flag=9
1846
- CONSOLE LOG ENTRY: Finished detectors samplesTestUnichemSources for 112 ms
1857
+ CONSOLE LOG ENTRY: Finished detectors samplesTestUnichemSources for 173 ms
1847
1858
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1848
1859
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1849
1860
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1853,7 +1864,7 @@ CONSOLE LOG ENTRY: Running tests
1853
1864
  CONSOLE LOG ENTRY: Started detectors category
1854
1865
  CONSOLE LOG ENTRY: Started detectors samplesTestUrl
1855
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2FtestUrl.csv?&&flag=9
1856
- CONSOLE LOG ENTRY: Finished detectors samplesTestUrl for 21 ms
1867
+ CONSOLE LOG ENTRY: Finished detectors samplesTestUrl for 18 ms
1857
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1858
1869
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1859
1870
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1862,7 +1873,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1862
1873
  CONSOLE LOG ENTRY: Running tests
1863
1874
  CONSOLE LOG ENTRY: Started detectors category
1864
1875
  CONSOLE LOG ENTRY: Started detectors SepComplex
1865
- CONSOLE LOG ENTRY: Finished detectors SepComplex for 11 ms
1876
+ CONSOLE LOG ENTRY: Finished detectors SepComplex for 16 ms
1866
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1867
1878
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1868
1879
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1871,7 +1882,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1871
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  CONSOLE LOG ENTRY: Running tests
1872
1883
  CONSOLE LOG ENTRY: Started detectors category
1873
1884
  CONSOLE LOG ENTRY: Started detectors SepDna
1874
- CONSOLE LOG ENTRY: Finished detectors SepDna for 16 ms
1885
+ CONSOLE LOG ENTRY: Finished detectors SepDna for 19 ms
1875
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1876
1887
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1877
1888
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1880,7 +1891,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1880
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  CONSOLE LOG ENTRY: Running tests
1881
1892
  CONSOLE LOG ENTRY: Started detectors category
1882
1893
  CONSOLE LOG ENTRY: Started detectors SepMsaN1
1883
- CONSOLE LOG ENTRY: Finished detectors SepMsaN1 for 16 ms
1894
+ CONSOLE LOG ENTRY: Finished detectors SepMsaN1 for 17 ms
1884
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1885
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  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1886
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  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1889,7 +1900,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1889
1900
  CONSOLE LOG ENTRY: Running tests
1890
1901
  CONSOLE LOG ENTRY: Started detectors category
1891
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  CONSOLE LOG ENTRY: Started detectors SepMsaUnWEmpty
1892
- CONSOLE LOG ENTRY: Finished detectors SepMsaUnWEmpty for 15 ms
1903
+ CONSOLE LOG ENTRY: Finished detectors SepMsaUnWEmpty for 12 ms
1893
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1894
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  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1895
1906
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1898,7 +1909,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1898
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  CONSOLE LOG ENTRY: Running tests
1899
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  CONSOLE LOG ENTRY: Started detectors category
1900
1911
  CONSOLE LOG ENTRY: Started detectors SepPt
1901
- CONSOLE LOG ENTRY: Finished detectors SepPt for 13 ms
1912
+ CONSOLE LOG ENTRY: Finished detectors SepPt for 16 ms
1902
1913
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1903
1914
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1904
1915
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1907,7 +1918,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1907
1918
  CONSOLE LOG ENTRY: Running tests
1908
1919
  CONSOLE LOG ENTRY: Started detectors category
1909
1920
  CONSOLE LOG ENTRY: Started detectors SepRna
1910
- CONSOLE LOG ENTRY: Finished detectors SepRna for 23 ms
1921
+ CONSOLE LOG ENTRY: Finished detectors SepRna for 12 ms
1911
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1912
1923
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1913
1924
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1916,7 +1927,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1916
1927
  CONSOLE LOG ENTRY: Running tests
1917
1928
  CONSOLE LOG ENTRY: Started detectors category
1918
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  CONSOLE LOG ENTRY: Started detectors SepUn1
1919
- CONSOLE LOG ENTRY: Finished detectors SepUn1 for 17 ms
1930
+ CONSOLE LOG ENTRY: Finished detectors SepUn1 for 19 ms
1920
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  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1921
1932
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1922
1933
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1925,7 +1936,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1925
1936
  CONSOLE LOG ENTRY: Running tests
1926
1937
  CONSOLE LOG ENTRY: Started detectors category
1927
1938
  CONSOLE LOG ENTRY: Started detectors SepUn2
1928
- CONSOLE LOG ENTRY: Finished detectors SepUn2 for 11 ms
1939
+ CONSOLE LOG ENTRY: Finished detectors SepUn2 for 18 ms
1929
1940
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1930
1941
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1931
1942
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
@@ -1934,13 +1945,13 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1934
1945
  CONSOLE LOG ENTRY: Running tests
1935
1946
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1936
1947
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely fastaDnaWeak1LikelyName
1937
- CONSOLE LOG ENTRY: Finished detectors.weak-and-likely fastaDnaWeak1LikelyName for 12 ms
1948
+ CONSOLE LOG ENTRY: Finished detectors.weak-and-likely fastaDnaWeak1LikelyName for 17 ms
1938
1949
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1939
1950
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1940
1951
  CONSOLE LOG ENTRY: Running tests
1941
1952
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1942
1953
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely fastaDnaWeak1
1943
- CONSOLE LOG ENTRY: Finished detectors.weak-and-likely fastaDnaWeak1 for 7 ms
1954
+ CONSOLE LOG ENTRY: Finished detectors.weak-and-likely fastaDnaWeak1 for 9 ms
1944
1955
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1945
1956
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1946
1957
  CONSOLE LOG ENTRY: Running tests
@@ -1952,31 +1963,31 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1952
1963
  CONSOLE LOG ENTRY: Running tests
1953
1964
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1954
1965
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely fastaPtWeak1
1955
- CONSOLE LOG ENTRY: Finished detectors.weak-and-likely fastaPtWeak1 for 14 ms
1966
+ CONSOLE LOG ENTRY: Finished detectors.weak-and-likely fastaPtWeak1 for 9 ms
1956
1967
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1957
1968
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1958
1969
  CONSOLE LOG ENTRY: Running tests
1959
1970
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1960
1971
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely fastaRnaWeak1LikelyName
1961
- CONSOLE LOG ENTRY: Finished detectors.weak-and-likely fastaRnaWeak1LikelyName for 12 ms
1972
+ CONSOLE LOG ENTRY: Finished detectors.weak-and-likely fastaRnaWeak1LikelyName for 58 ms
1962
1973
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1963
1974
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1964
1975
  CONSOLE LOG ENTRY: Running tests
1965
1976
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1966
1977
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely fastaRnaWeak1
1967
- CONSOLE LOG ENTRY: Finished detectors.weak-and-likely fastaRnaWeak1 for 17 ms
1978
+ CONSOLE LOG ENTRY: Finished detectors.weak-and-likely fastaRnaWeak1 for 13 ms
1968
1979
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1969
1980
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1970
1981
  CONSOLE LOG ENTRY: Running tests
1971
1982
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1972
1983
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely fastaUn1LikelyName
1973
- CONSOLE LOG ENTRY: Finished detectors.weak-and-likely fastaUn1LikelyName for 12 ms
1984
+ CONSOLE LOG ENTRY: Finished detectors.weak-and-likely fastaUn1LikelyName for 15 ms
1974
1985
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1975
1986
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1976
1987
  CONSOLE LOG ENTRY: Running tests
1977
1988
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1978
1989
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely fastaUn1
1979
- CONSOLE LOG ENTRY: Finished detectors.weak-and-likely fastaUn1 for 10 ms
1990
+ CONSOLE LOG ENTRY: Finished detectors.weak-and-likely fastaUn1 for 11 ms
1980
1991
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1981
1992
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1982
1993
  CONSOLE LOG ENTRY: Running tests
@@ -1988,20 +1999,20 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
1988
1999
  CONSOLE LOG ENTRY: Running tests
1989
2000
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely category
1990
2001
  CONSOLE LOG ENTRY: Started detectors.weak-and-likely fastaUnMsa1LikelyName
1991
- CONSOLE LOG ENTRY: Finished detectors.weak-and-likely fastaUnMsa1LikelyName for 11 ms
2002
+ CONSOLE LOG ENTRY: Finished detectors.weak-and-likely fastaUnMsa1LikelyName for 13 ms
1992
2003
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1993
2004
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
1994
2005
  CONSOLE LOG ENTRY: Running tests
1995
2006
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
1996
2007
  CONSOLE LOG ENTRY: Started detectorsBenchmark fastaDnaLong1e6Few50
1997
2008
  CONSOLE LOG ENTRY: ET 3 ms is OK.
1998
- CONSOLE LOG ENTRY: Finished detectorsBenchmark fastaDnaLong1e6Few50 for 7123 ms
2009
+ CONSOLE LOG ENTRY: Finished detectorsBenchmark fastaDnaLong1e6Few50 for 6058 ms
1999
2010
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2000
2011
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2001
2012
  CONSOLE LOG ENTRY: Running tests
2002
2013
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
2003
2014
  CONSOLE LOG ENTRY: Started detectorsBenchmark fastaDnaShorts50Few50
2004
- CONSOLE LOG ENTRY: ET 2 ms is OK.
2015
+ CONSOLE LOG ENTRY: ET 3 ms is OK.
2005
2016
  CONSOLE LOG ENTRY: Finished detectorsBenchmark fastaDnaShorts50Few50 for 7 ms
2006
2017
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2007
2018
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
@@ -2009,34 +2020,34 @@ CONSOLE LOG ENTRY: Running tests
2009
2020
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
2010
2021
  CONSOLE LOG ENTRY: Started detectorsBenchmark fastaDnaShorts50Many1E6
2011
2022
  CONSOLE LOG ENTRY: ET 3 ms is OK.
2012
- CONSOLE LOG ENTRY: Finished detectorsBenchmark fastaDnaShorts50Many1E6 for 7849 ms
2023
+ CONSOLE LOG ENTRY: Finished detectorsBenchmark fastaDnaShorts50Many1E6 for 8261 ms
2013
2024
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2014
2025
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2015
2026
  CONSOLE LOG ENTRY: Running tests
2016
2027
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
2017
2028
  CONSOLE LOG ENTRY: Started detectorsBenchmark separatorDnaLong1e6Few50
2018
2029
  CONSOLE LOG ENTRY: ET 2 ms is OK.
2019
- CONSOLE LOG ENTRY: Finished detectorsBenchmark separatorDnaLong1e6Few50 for 2291 ms
2030
+ CONSOLE LOG ENTRY: Finished detectorsBenchmark separatorDnaLong1e6Few50 for 2303 ms
2020
2031
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2021
2032
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2022
2033
  CONSOLE LOG ENTRY: Running tests
2023
2034
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
2024
2035
  CONSOLE LOG ENTRY: Started detectorsBenchmark separatorDnaShorts50Few50
2025
- CONSOLE LOG ENTRY: ET 1 ms is OK.
2026
- CONSOLE LOG ENTRY: Finished detectorsBenchmark separatorDnaShorts50Few50 for 3 ms
2036
+ CONSOLE LOG ENTRY: ET 2 ms is OK.
2037
+ CONSOLE LOG ENTRY: Finished detectorsBenchmark separatorDnaShorts50Few50 for 6 ms
2027
2038
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2028
2039
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2029
2040
  CONSOLE LOG ENTRY: Running tests
2030
2041
  CONSOLE LOG ENTRY: Started detectorsBenchmark category
2031
2042
  CONSOLE LOG ENTRY: Started detectorsBenchmark separatorDnaShorts50Many1E6
2032
- CONSOLE LOG ENTRY: ET 1 ms is OK.
2033
- CONSOLE LOG ENTRY: Finished detectorsBenchmark separatorDnaShorts50Many1E6 for 5200 ms
2043
+ CONSOLE LOG ENTRY: ET 2 ms is OK.
2044
+ CONSOLE LOG ENTRY: Finished detectorsBenchmark separatorDnaShorts50Many1E6 for 5474 ms
2034
2045
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2035
2046
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2036
2047
  CONSOLE LOG ENTRY: Running tests
2037
2048
  CONSOLE LOG ENTRY: Started Distance category
2038
2049
  CONSOLE LOG ENTRY: Started Distance DNA-distance-function
2039
- CONSOLE LOG ENTRY: Finished Distance DNA-distance-function for 13 ms
2050
+ CONSOLE LOG ENTRY: Finished Distance DNA-distance-function for 16 ms
2040
2051
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2041
2052
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2042
2053
  CONSOLE LOG ENTRY: Running tests
@@ -2060,7 +2071,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
2060
2071
  CONSOLE LOG ENTRY: Running tests
2061
2072
  CONSOLE LOG ENTRY: Started Distance category
2062
2073
  CONSOLE LOG ENTRY: Started Distance MSA-distance-function
2063
- CONSOLE LOG ENTRY: Finished Distance MSA-distance-function for 14 ms
2074
+ CONSOLE LOG ENTRY: Finished Distance MSA-distance-function for 11 ms
2064
2075
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2065
2076
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2066
2077
  CONSOLE LOG ENTRY: Running tests
@@ -2072,13 +2083,13 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
2072
2083
  CONSOLE LOG ENTRY: Running tests
2073
2084
  CONSOLE LOG ENTRY: Started Distance category
2074
2085
  CONSOLE LOG ENTRY: Started Distance needleman-blosum62
2075
- CONSOLE LOG ENTRY: Finished Distance needleman-blosum62 for 1 ms
2086
+ CONSOLE LOG ENTRY: Finished Distance needleman-blosum62 for 0 ms
2076
2087
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2077
2088
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2078
2089
  CONSOLE LOG ENTRY: Running tests
2079
2090
  CONSOLE LOG ENTRY: Started Distance category
2080
2091
  CONSOLE LOG ENTRY: Started Distance needleman-custom-del
2081
- CONSOLE LOG ENTRY: Finished Distance needleman-custom-del for 0 ms
2092
+ CONSOLE LOG ENTRY: Finished Distance needleman-custom-del for 1 ms
2082
2093
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2083
2094
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2084
2095
  CONSOLE LOG ENTRY: Running tests
@@ -2102,13 +2113,13 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
2102
2113
  CONSOLE LOG ENTRY: Running tests
2103
2114
  CONSOLE LOG ENTRY: Started Distance category
2104
2115
  CONSOLE LOG ENTRY: Started Distance needleman-custom-zero-extend
2105
- CONSOLE LOG ENTRY: Finished Distance needleman-custom-zero-extend for 0 ms
2116
+ CONSOLE LOG ENTRY: Finished Distance needleman-custom-zero-extend for 1 ms
2106
2117
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2107
2118
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2108
2119
  CONSOLE LOG ENTRY: Running tests
2109
2120
  CONSOLE LOG ENTRY: Started Distance category
2110
2121
  CONSOLE LOG ENTRY: Started Distance protein-distance-function
2111
- CONSOLE LOG ENTRY: Finished Distance protein-distance-function for 10 ms
2122
+ CONSOLE LOG ENTRY: Finished Distance protein-distance-function for 9 ms
2112
2123
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2113
2124
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2114
2125
  CONSOLE LOG ENTRY: Running tests
@@ -2120,7 +2131,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
2120
2131
  CONSOLE LOG ENTRY: Running tests
2121
2132
  CONSOLE LOG ENTRY: Started fastaExport category
2122
2133
  CONSOLE LOG ENTRY: Started fastaExport saveAsFastaTest2
2123
- CONSOLE LOG ENTRY: Finished fastaExport saveAsFastaTest2 for 1 ms
2134
+ CONSOLE LOG ENTRY: Finished fastaExport saveAsFastaTest2 for 2 ms
2124
2135
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2125
2136
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2126
2137
  CONSOLE LOG ENTRY: Running tests
@@ -2138,7 +2149,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
2138
2149
  CONSOLE LOG ENTRY: Running tests
2139
2150
  CONSOLE LOG ENTRY: Started fastaFileHandler category
2140
2151
  CONSOLE LOG ENTRY: Started fastaFileHandler testExtraNewlines
2141
- CONSOLE LOG ENTRY: Finished fastaFileHandler testExtraNewlines for 1 ms
2152
+ CONSOLE LOG ENTRY: Finished fastaFileHandler testExtraNewlines for 2 ms
2142
2153
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2143
2154
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2144
2155
  CONSOLE LOG ENTRY: Running tests
@@ -2156,7 +2167,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
2156
2167
  CONSOLE LOG ENTRY: Running tests
2157
2168
  CONSOLE LOG ENTRY: Started helm category
2158
2169
  CONSOLE LOG ENTRY: Started helm single-cyclized-C-0-0
2159
- CONSOLE LOG ENTRY: Finished helm single-cyclized-C-0-0 for 1 ms
2170
+ CONSOLE LOG ENTRY: Finished helm single-cyclized-C-0-0 for 2 ms
2160
2171
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2161
2172
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2162
2173
  CONSOLE LOG ENTRY: Running tests
@@ -2168,7 +2179,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
2168
2179
  CONSOLE LOG ENTRY: Running tests
2169
2180
  CONSOLE LOG ENTRY: Started helm category
2170
2181
  CONSOLE LOG ENTRY: Started helm single-cyclized-C-2-2
2171
- CONSOLE LOG ENTRY: Finished helm single-cyclized-C-2-2 for 0 ms
2182
+ CONSOLE LOG ENTRY: Finished helm single-cyclized-C-2-2 for 1 ms
2172
2183
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2173
2184
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2174
2185
  CONSOLE LOG ENTRY: Running tests
@@ -2180,7 +2191,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
2180
2191
  CONSOLE LOG ENTRY: Running tests
2181
2192
  CONSOLE LOG ENTRY: Started helm category
2182
2193
  CONSOLE LOG ENTRY: Started helm two-connected-1
2183
- CONSOLE LOG ENTRY: Finished helm two-connected-1 for 0 ms
2194
+ CONSOLE LOG ENTRY: Finished helm two-connected-1 for 1 ms
2184
2195
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2185
2196
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2186
2197
  CONSOLE LOG ENTRY: Running tests
@@ -2192,13 +2203,13 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
2192
2203
  CONSOLE LOG ENTRY: Running tests
2193
2204
  CONSOLE LOG ENTRY: Started helm category
2194
2205
  CONSOLE LOG ENTRY: Started helm two-cyclized-1-9
2195
- CONSOLE LOG ENTRY: Finished helm two-cyclized-1-9 for 1 ms
2206
+ CONSOLE LOG ENTRY: Finished helm two-cyclized-1-9 for 0 ms
2196
2207
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2197
2208
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2198
2209
  CONSOLE LOG ENTRY: Running tests
2199
2210
  CONSOLE LOG ENTRY: Started helm category
2200
2211
  CONSOLE LOG ENTRY: Started helm two-separated-1-5
2201
- CONSOLE LOG ENTRY: Finished helm two-separated-1-5 for 0 ms
2212
+ CONSOLE LOG ENTRY: Finished helm two-separated-1-5 for 1 ms
2202
2213
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2203
2214
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2204
2215
  CONSOLE LOG ENTRY: Running tests
@@ -2243,7 +2254,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
2243
2254
  "explicit": [],
2244
2255
  "duplicateMonomerPreferences": {}
2245
2256
  }
2246
- CONSOLE LOG ENTRY: Finished monomerLibraries default for 64 ms
2257
+ CONSOLE LOG ENTRY: Finished monomerLibraries default for 53 ms
2247
2258
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2248
2259
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
2249
2260
  {}
@@ -2283,7 +2294,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
2283
2294
  "explicit": [],
2284
2295
  "duplicateMonomerPreferences": {}
2285
2296
  }
2286
- CONSOLE LOG ENTRY: Finished monomerLibraries empty for 1 ms
2297
+ CONSOLE LOG ENTRY: Finished monomerLibraries empty for 2 ms
2287
2298
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2288
2299
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
2289
2300
  {}
@@ -2317,7 +2328,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
2317
2328
  }
2318
2329
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
2319
2330
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
2320
- CONSOLE LOG ENTRY: Finished monomerLibraries forTests for 53 ms
2331
+ CONSOLE LOG ENTRY: Finished monomerLibraries forTests for 55 ms
2321
2332
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2322
2333
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
2323
2334
  {}
@@ -2367,19 +2378,19 @@ Please cite:
2367
2378
  WARNING: AVX2 instruction set not found!
2368
2379
  Kalign will not run optimally.
2369
2380
 
2370
- [2025-02-03 10:59:39] : LOG : Detected protein sequences.
2371
- [2025-02-03 10:59:39] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2372
- [2025-02-03 10:59:39] : LOG : Detected protein sequences.
2373
- [2025-02-03 10:59:39] : LOG : Detected: 3 sequences.
2374
- [2025-02-03 10:59:39] : LOG : Calculating pairwise distances
2375
- [2025-02-03 10:59:39] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2376
- [2025-02-03 10:59:39] : LOG : 3 anchors
2377
- [2025-02-03 10:59:39] : LOG : Building guide tree.
2378
- [2025-02-03 10:59:39] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2379
- [2025-02-03 10:59:39] : LOG : Aligning
2380
- [2025-02-03 10:59:39] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2381
+ [2025-02-10 12:48:46] : LOG : Detected protein sequences.
2382
+ [2025-02-10 12:48:46] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2383
+ [2025-02-10 12:48:46] : LOG : Detected protein sequences.
2384
+ [2025-02-10 12:48:46] : LOG : Detected: 3 sequences.
2385
+ [2025-02-10 12:48:46] : LOG : Calculating pairwise distances
2386
+ [2025-02-10 12:48:46] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2387
+ [2025-02-10 12:48:46] : LOG : 3 anchors
2388
+ [2025-02-10 12:48:46] : LOG : Building guide tree.
2389
+ [2025-02-10 12:48:46] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2390
+ [2025-02-10 12:48:46] : LOG : Aligning
2391
+ [2025-02-10 12:48:46] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2381
2392
 
2382
- CONSOLE LOG ENTRY: Finished MSA isCorrectLong for 646 ms
2393
+ CONSOLE LOG ENTRY: Finished MSA isCorrectLong for 702 ms
2383
2394
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2384
2395
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
2385
2396
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
@@ -2406,19 +2417,19 @@ Please cite:
2406
2417
  WARNING: AVX2 instruction set not found!
2407
2418
  Kalign will not run optimally.
2408
2419
 
2409
- [2025-02-03 10:59:40] : LOG : Detected protein sequences.
2410
- [2025-02-03 10:59:40] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2411
- [2025-02-03 10:59:40] : LOG : Detected protein sequences.
2412
- [2025-02-03 10:59:40] : LOG : Detected: 3 sequences.
2413
- [2025-02-03 10:59:40] : LOG : Calculating pairwise distances
2414
- [2025-02-03 10:59:40] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2415
- [2025-02-03 10:59:40] : LOG : 3 anchors
2416
- [2025-02-03 10:59:40] : LOG : Building guide tree.
2417
- [2025-02-03 10:59:40] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2418
- [2025-02-03 10:59:40] : LOG : Aligning
2419
- [2025-02-03 10:59:40] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2420
+ [2025-02-10 12:48:47] : LOG : Detected protein sequences.
2421
+ [2025-02-10 12:48:47] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2422
+ [2025-02-10 12:48:47] : LOG : Detected protein sequences.
2423
+ [2025-02-10 12:48:47] : LOG : Detected: 3 sequences.
2424
+ [2025-02-10 12:48:47] : LOG : Calculating pairwise distances
2425
+ [2025-02-10 12:48:47] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2426
+ [2025-02-10 12:48:47] : LOG : 3 anchors
2427
+ [2025-02-10 12:48:47] : LOG : Building guide tree.
2428
+ [2025-02-10 12:48:47] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2429
+ [2025-02-10 12:48:47] : LOG : Aligning
2430
+ [2025-02-10 12:48:47] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2420
2431
 
2421
- CONSOLE LOG ENTRY: Finished MSA isCorrect for 41 ms
2432
+ CONSOLE LOG ENTRY: Finished MSA isCorrect for 45 ms
2422
2433
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2423
2434
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2424
2435
  CONSOLE LOG ENTRY: Running tests
@@ -2444,19 +2455,19 @@ Please cite:
2444
2455
  WARNING: AVX2 instruction set not found!
2445
2456
  Kalign will not run optimally.
2446
2457
 
2447
- [2025-02-03 10:59:41] : LOG : Detected protein sequences.
2448
- [2025-02-03 10:59:41] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2449
- [2025-02-03 10:59:41] : LOG : Detected protein sequences.
2450
- [2025-02-03 10:59:41] : LOG : Detected: 3 sequences.
2451
- [2025-02-03 10:59:41] : LOG : Calculating pairwise distances
2452
- [2025-02-03 10:59:41] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2453
- [2025-02-03 10:59:41] : LOG : 3 anchors
2454
- [2025-02-03 10:59:41] : LOG : Building guide tree.
2455
- [2025-02-03 10:59:41] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2456
- [2025-02-03 10:59:41] : LOG : Aligning
2457
- [2025-02-03 10:59:41] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2458
+ [2025-02-10 12:48:48] : LOG : Detected protein sequences.
2459
+ [2025-02-10 12:48:48] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2460
+ [2025-02-10 12:48:48] : LOG : Detected protein sequences.
2461
+ [2025-02-10 12:48:48] : LOG : Detected: 3 sequences.
2462
+ [2025-02-10 12:48:48] : LOG : Calculating pairwise distances
2463
+ [2025-02-10 12:48:48] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2464
+ [2025-02-10 12:48:48] : LOG : 3 anchors
2465
+ [2025-02-10 12:48:48] : LOG : Building guide tree.
2466
+ [2025-02-10 12:48:48] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2467
+ [2025-02-10 12:48:48] : LOG : Aligning
2468
+ [2025-02-10 12:48:48] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2458
2469
 
2459
- CONSOLE LOG ENTRY: Finished MSA isCorrectSeparatorLong for 83 ms
2470
+ CONSOLE LOG ENTRY: Finished MSA isCorrectSeparatorLong for 102 ms
2460
2471
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2461
2472
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2462
2473
  CONSOLE LOG ENTRY: Running tests
@@ -2482,17 +2493,17 @@ Please cite:
2482
2493
  WARNING: AVX2 instruction set not found!
2483
2494
  Kalign will not run optimally.
2484
2495
 
2485
- [2025-02-03 10:59:42] : LOG : Detected protein sequences.
2486
- [2025-02-03 10:59:42] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2487
- [2025-02-03 10:59:42] : LOG : Detected protein sequences.
2488
- [2025-02-03 10:59:42] : LOG : Detected: 3 sequences.
2489
- [2025-02-03 10:59:42] : LOG : Calculating pairwise distances
2490
- [2025-02-03 10:59:42] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2491
- [2025-02-03 10:59:42] : LOG : 3 anchors
2492
- [2025-02-03 10:59:42] : LOG : Building guide tree.
2493
- [2025-02-03 10:59:42] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2494
- [2025-02-03 10:59:42] : LOG : Aligning
2495
- [2025-02-03 10:59:42] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2496
+ [2025-02-10 12:48:49] : LOG : Detected protein sequences.
2497
+ [2025-02-10 12:48:49] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2498
+ [2025-02-10 12:48:49] : LOG : Detected protein sequences.
2499
+ [2025-02-10 12:48:49] : LOG : Detected: 3 sequences.
2500
+ [2025-02-10 12:48:49] : LOG : Calculating pairwise distances
2501
+ [2025-02-10 12:48:49] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2502
+ [2025-02-10 12:48:49] : LOG : 3 anchors
2503
+ [2025-02-10 12:48:49] : LOG : Building guide tree.
2504
+ [2025-02-10 12:48:49] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2505
+ [2025-02-10 12:48:49] : LOG : Aligning
2506
+ [2025-02-10 12:48:49] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2496
2507
 
2497
2508
  CONSOLE LOG ENTRY: Finished MSA isCorrectSeparator for 110 ms
2498
2509
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
@@ -2500,13 +2511,13 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
2500
2511
  CONSOLE LOG ENTRY: Running tests
2501
2512
  CONSOLE LOG ENTRY: Started Palettes category
2502
2513
  CONSOLE LOG ENTRY: Started Palettes testPaletteAA
2503
- CONSOLE LOG ENTRY: Finished Palettes testPaletteAA for 384 ms
2514
+ CONSOLE LOG ENTRY: Finished Palettes testPaletteAA for 480 ms
2504
2515
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2505
2516
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2506
2517
  CONSOLE LOG ENTRY: Running tests
2507
2518
  CONSOLE LOG ENTRY: Started Palettes category
2508
2519
  CONSOLE LOG ENTRY: Started Palettes testPaletteN
2509
- CONSOLE LOG ENTRY: Finished Palettes testPaletteN for 0 ms
2520
+ CONSOLE LOG ENTRY: Finished Palettes testPaletteN for 1 ms
2510
2521
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2511
2522
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2512
2523
  CONSOLE LOG ENTRY: Running tests
@@ -2531,7 +2542,7 @@ CONSOLE LOG ENTRY: Running tests
2531
2542
  CONSOLE LOG ENTRY: Started renderers category
2532
2543
  CONSOLE LOG ENTRY: Started renderers afterConvert
2533
2544
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fsamples%2FFASTA_PT.csv?&&flag=9
2534
- CONSOLE LOG ENTRY: Finished renderers afterConvert for 533 ms
2545
+ CONSOLE LOG ENTRY: Finished renderers afterConvert for 669 ms
2535
2546
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2536
2547
  CONSOLE LOG ENTRY: Started renderers: monomerPlacer category
2537
2548
  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
@@ -2586,7 +2597,7 @@ CONSOLE LOG ENTRY: Running tests
2586
2597
  CONSOLE LOG ENTRY: Started renderers category
2587
2598
  CONSOLE LOG ENTRY: Started renderers afterConvertToHelm
2588
2599
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fsamples%2FFASTA_PT.csv?&&flag=9
2589
- CONSOLE LOG ENTRY: Finished renderers afterConvertToHelm for 235 ms
2600
+ CONSOLE LOG ENTRY: Finished renderers afterConvertToHelm for 290 ms
2590
2601
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2591
2602
  CONSOLE LOG ENTRY: Started renderers: monomerPlacer category
2592
2603
  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
@@ -2663,19 +2674,19 @@ Please cite:
2663
2674
  WARNING: AVX2 instruction set not found!
2664
2675
  Kalign will not run optimally.
2665
2676
 
2666
- [2025-02-03 10:59:53] : LOG : Detected protein sequences.
2667
- [2025-02-03 10:59:53] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2668
- [2025-02-03 10:59:53] : LOG : Detected protein sequences.
2669
- [2025-02-03 10:59:53] : LOG : Detected: 64 sequences.
2670
- [2025-02-03 10:59:53] : LOG : Calculating pairwise distances
2671
- [2025-02-03 10:59:53] : LOG : CPU Time: 0.01u 00:00:00.01 Elapsed: 00:00:00.00
2672
- [2025-02-03 10:59:53] : LOG : 32 anchors
2673
- [2025-02-03 10:59:53] : LOG : Building guide tree.
2674
- [2025-02-03 10:59:53] : LOG : CPU Time: 0.02u 00:00:00.02 Elapsed: 00:00:00.00
2675
- [2025-02-03 10:59:53] : LOG : Aligning
2676
- [2025-02-03 10:59:53] : LOG : CPU Time: 0.01u 00:00:00.00 Elapsed: 00:00:00.00
2677
+ [2025-02-10 12:49:01] : LOG : Detected protein sequences.
2678
+ [2025-02-10 12:49:01] : LOG : CPU Time: 0.00u 00:00:00.00 Elapsed: 00:00:00.00
2679
+ [2025-02-10 12:49:01] : LOG : Detected protein sequences.
2680
+ [2025-02-10 12:49:01] : LOG : Detected: 64 sequences.
2681
+ [2025-02-10 12:49:01] : LOG : Calculating pairwise distances
2682
+ [2025-02-10 12:49:01] : LOG : CPU Time: 0.01u 00:00:00.01 Elapsed: 00:00:00.00
2683
+ [2025-02-10 12:49:01] : LOG : 32 anchors
2684
+ [2025-02-10 12:49:01] : LOG : Building guide tree.
2685
+ [2025-02-10 12:49:01] : LOG : CPU Time: 0.01u 00:00:00.01 Elapsed: 00:00:00.00
2686
+ [2025-02-10 12:49:01] : LOG : Aligning
2687
+ [2025-02-10 12:49:01] : LOG : CPU Time: 0.01u 00:00:00.00 Elapsed: 00:00:00.00
2677
2688
 
2678
- CONSOLE LOG ENTRY: Finished renderers afterMsa for 614 ms
2689
+ CONSOLE LOG ENTRY: Finished renderers afterMsa for 659 ms
2679
2690
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2680
2691
  CONSOLE LOG ENTRY: Started renderers: monomerPlacer category
2681
2692
  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
@@ -2729,8 +2740,8 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
2729
2740
  CONSOLE LOG ENTRY: Running tests
2730
2741
  CONSOLE LOG ENTRY: Started renderers category
2731
2742
  CONSOLE LOG ENTRY: Started renderers long sequence performance
2732
- CONSOLE LOG ENTRY: Performance test: Long sequences: 1181ms
2733
- CONSOLE LOG ENTRY: Finished renderers long sequence performance for 1190 ms
2743
+ CONSOLE LOG ENTRY: Performance test: Long sequences: 1215ms
2744
+ CONSOLE LOG ENTRY: Finished renderers long sequence performance for 1224 ms
2734
2745
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2735
2746
  CONSOLE LOG ENTRY: Started renderers: monomerPlacer category
2736
2747
  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
@@ -2784,8 +2795,9 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
2784
2795
  CONSOLE LOG ENTRY: Running tests
2785
2796
  CONSOLE LOG ENTRY: Started renderers category
2786
2797
  CONSOLE LOG ENTRY: Started renderers many sequence performance
2787
- CONSOLE LOG ENTRY: Performance test: Many sequences: 223ms
2788
- CONSOLE LOG ENTRY: Finished renderers many sequence performance for 459 ms
2798
+ CONSOLE LOG ENTRY: Performance test: Many sequences: 217ms
2799
+ CONSOLE LOG ENTRY: Finished renderers many sequence performance for 447 ms
2800
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
2789
2801
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2790
2802
  CONSOLE LOG ENTRY: Started renderers: monomerPlacer category
2791
2803
  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
@@ -2835,7 +2847,6 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
2835
2847
  "explicit": [],
2836
2848
  "duplicateMonomerPreferences": {}
2837
2849
  }
2838
- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
2839
2850
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2840
2851
  CONSOLE LOG ENTRY: Running tests
2841
2852
  CONSOLE LOG ENTRY: Started renderers: monomerPlacer category
@@ -2919,7 +2930,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
2919
2930
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
2920
2931
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
2921
2932
  CONSOLE LOG ENTRY: Started renderers: monomerPlacer getCellMonomerLengths-monoWithGapColumn
2922
- CONSOLE LOG ENTRY: Finished renderers: monomerPlacer getCellMonomerLengths-monoWithGapColumn for 10 ms
2933
+ CONSOLE LOG ENTRY: Finished renderers: monomerPlacer getCellMonomerLengths-monoWithGapColumn for 9 ms
2923
2934
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2924
2935
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
2925
2936
  {
@@ -2972,7 +2983,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
2972
2983
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
2973
2984
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
2974
2985
  CONSOLE LOG ENTRY: Started renderers: monomerPlacer getCellMonomerLengths-monoWithGaps
2975
- CONSOLE LOG ENTRY: Finished renderers: monomerPlacer getCellMonomerLengths-monoWithGaps for 8 ms
2986
+ CONSOLE LOG ENTRY: Finished renderers: monomerPlacer getCellMonomerLengths-monoWithGaps for 10 ms
2976
2987
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
2977
2988
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
2978
2989
  {
@@ -3078,7 +3089,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
3078
3089
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
3079
3090
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
3080
3091
  CONSOLE LOG ENTRY: Started renderers: monomerPlacer getPosition-splitterMsa
3081
- CONSOLE LOG ENTRY: Finished renderers: monomerPlacer getPosition-splitterMsa for 9 ms
3092
+ CONSOLE LOG ENTRY: Finished renderers: monomerPlacer getPosition-splitterMsa for 12 ms
3082
3093
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
3083
3094
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
3084
3095
  {
@@ -3131,7 +3142,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
3131
3142
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
3132
3143
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
3133
3144
  CONSOLE LOG ENTRY: Started renderers: monomerPlacer getPosition-splitter
3134
- CONSOLE LOG ENTRY: Finished renderers: monomerPlacer getPosition-splitter for 10 ms
3145
+ CONSOLE LOG ENTRY: Finished renderers: monomerPlacer getPosition-splitter for 11 ms
3135
3146
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
3136
3147
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
3137
3148
  {
@@ -3450,7 +3461,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
3450
3461
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
3451
3462
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
3452
3463
  CONSOLE LOG ENTRY: Started renderers: monomerPlacer hitBounds-c4left
3453
- CONSOLE LOG ENTRY: Finished renderers: monomerPlacer hitBounds-c4left for 1 ms
3464
+ CONSOLE LOG ENTRY: Finished renderers: monomerPlacer hitBounds-c4left for 0 ms
3454
3465
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
3455
3466
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
3456
3467
  {
@@ -3685,11 +3696,12 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
3685
3696
  "explicit": [],
3686
3697
  "duplicateMonomerPreferences": {}
3687
3698
  }
3699
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
3688
3700
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
3689
3701
  CONSOLE LOG ENTRY: Running tests
3690
3702
  CONSOLE LOG ENTRY: Started renderers category
3691
3703
  CONSOLE LOG ENTRY: Started renderers rendererMacromoleculeDifference
3692
- CONSOLE LOG ENTRY: Finished renderers rendererMacromoleculeDifference for 96 ms
3704
+ CONSOLE LOG ENTRY: Finished renderers rendererMacromoleculeDifference for 117 ms
3693
3705
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
3694
3706
  CONSOLE LOG ENTRY: Started renderers: monomerPlacer category
3695
3707
  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
@@ -3739,13 +3751,12 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
3739
3751
  "explicit": [],
3740
3752
  "duplicateMonomerPreferences": {}
3741
3753
  }
3742
- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
3743
3754
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
3744
3755
  CONSOLE LOG ENTRY: Running tests
3745
3756
  CONSOLE LOG ENTRY: Started renderers category
3746
3757
  CONSOLE LOG ENTRY: Started renderers rendererMacromoleculeFasta
3747
3758
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fsamples%2FFASTA.csv?&&flag=9
3748
- CONSOLE LOG ENTRY: Finished renderers rendererMacromoleculeFasta for 130 ms
3759
+ CONSOLE LOG ENTRY: Finished renderers rendererMacromoleculeFasta for 135 ms
3749
3760
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
3750
3761
  CONSOLE LOG ENTRY: Started renderers: monomerPlacer category
3751
3762
  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
@@ -3800,7 +3811,7 @@ CONSOLE LOG ENTRY: Running tests
3800
3811
  CONSOLE LOG ENTRY: Started renderers category
3801
3812
  CONSOLE LOG ENTRY: Started renderers rendererMacromoleculeSeparator
3802
3813
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fsamples%2FSEPARATOR_PT.csv?&&flag=9
3803
- CONSOLE LOG ENTRY: Finished renderers rendererMacromoleculeSeparator for 151 ms
3814
+ CONSOLE LOG ENTRY: Finished renderers rendererMacromoleculeSeparator for 157 ms
3804
3815
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
3805
3816
  CONSOLE LOG ENTRY: Started renderers: monomerPlacer category
3806
3817
  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
@@ -3906,7 +3917,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
3906
3917
  CONSOLE LOG ENTRY: Running tests
3907
3918
  CONSOLE LOG ENTRY: Started renderers category
3908
3919
  CONSOLE LOG ENTRY: Started renderers selectRendererBySemType
3909
- CONSOLE LOG ENTRY: Finished renderers selectRendererBySemType for 164 ms
3920
+ CONSOLE LOG ENTRY: Finished renderers selectRendererBySemType for 182 ms
3910
3921
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
3911
3922
  CONSOLE LOG ENTRY: Started renderers: monomerPlacer category
3912
3923
  CONSOLE LOG ENTRY: Bio: getUserLibSettings()
@@ -3986,7 +3997,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
3986
3997
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
3987
3998
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
3988
3999
  CONSOLE LOG ENTRY: Started Scoring Identity-longReference
3989
- CONSOLE LOG ENTRY: Finished Scoring Identity-longReference for 5 ms
4000
+ CONSOLE LOG ENTRY: Finished Scoring Identity-longReference for 13 ms
3990
4001
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
3991
4002
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
3992
4003
  {
@@ -4039,7 +4050,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
4039
4050
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
4040
4051
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
4041
4052
  CONSOLE LOG ENTRY: Started Scoring Identity-shortReference
4042
- CONSOLE LOG ENTRY: Finished Scoring Identity-shortReference for 6 ms
4053
+ CONSOLE LOG ENTRY: Finished Scoring Identity-shortReference for 7 ms
4043
4054
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4044
4055
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
4045
4056
  {
@@ -4115,6 +4126,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
4115
4126
  "explicit": [],
4116
4127
  "duplicateMonomerPreferences": {}
4117
4128
  }
4129
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
4118
4130
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4119
4131
  CONSOLE LOG ENTRY: Running tests
4120
4132
  CONSOLE LOG ENTRY: Started Scoring category
@@ -4146,8 +4158,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
4146
4158
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
4147
4159
  CONSOLE LOG ENTRY: Started Scoring Similarity
4148
4160
  CONSOLE LOG ENTRY: RDKit Service was initialized
4149
- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
4150
- CONSOLE LOG ENTRY: Finished Scoring Similarity for 712 ms
4161
+ CONSOLE LOG ENTRY: Finished Scoring Similarity for 572 ms
4151
4162
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4152
4163
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
4153
4164
  {
@@ -4174,7 +4185,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
4174
4185
  CONSOLE LOG ENTRY: Running tests
4175
4186
  CONSOLE LOG ENTRY: Started SeqHandler category
4176
4187
  CONSOLE LOG ENTRY: Started SeqHandler column-version
4177
- CONSOLE LOG ENTRY: Finished SeqHandler column-version for 10 ms
4188
+ CONSOLE LOG ENTRY: Finished SeqHandler column-version for 14 ms
4178
4189
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4179
4190
  CONSOLE LOG ENTRY: Started SeqHandler: splitted category
4180
4191
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion category
@@ -4256,7 +4267,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
4256
4267
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
4257
4268
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
4258
4269
  CONSOLE LOG ENTRY: Started SeqHandler: getHelm fasta
4259
- CONSOLE LOG ENTRY: Finished SeqHandler: getHelm fasta for 4 ms
4270
+ CONSOLE LOG ENTRY: Finished SeqHandler: getHelm fasta for 5 ms
4260
4271
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4261
4272
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
4262
4273
  {
@@ -4309,7 +4320,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
4309
4320
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
4310
4321
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
4311
4322
  CONSOLE LOG ENTRY: Started SeqHandler: getHelm helm-cyclic
4312
- CONSOLE LOG ENTRY: Finished SeqHandler: getHelm helm-cyclic for 4 ms
4323
+ CONSOLE LOG ENTRY: Finished SeqHandler: getHelm helm-cyclic for 8 ms
4313
4324
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4314
4325
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
4315
4326
  {
@@ -4362,7 +4373,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
4362
4373
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
4363
4374
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
4364
4375
  CONSOLE LOG ENTRY: Started SeqHandler: getHelm helm
4365
- CONSOLE LOG ENTRY: Finished SeqHandler: getHelm helm for 5 ms
4376
+ CONSOLE LOG ENTRY: Finished SeqHandler: getHelm helm for 4 ms
4366
4377
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4367
4378
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
4368
4379
  {
@@ -4415,7 +4426,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
4415
4426
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
4416
4427
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
4417
4428
  CONSOLE LOG ENTRY: Started SeqHandler: getHelm separator
4418
- CONSOLE LOG ENTRY: Finished SeqHandler: getHelm separator for 5 ms
4429
+ CONSOLE LOG ENTRY: Finished SeqHandler: getHelm separator for 22 ms
4419
4430
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4420
4431
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
4421
4432
  {
@@ -4442,38 +4453,38 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
4442
4453
  CONSOLE LOG ENTRY: Running tests
4443
4454
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion category
4444
4455
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion fastaDna-idx
4445
- CONSOLE LOG ENTRY: Finished SeqHandler: getRegion fastaDna-idx for 7 ms
4456
+ CONSOLE LOG ENTRY: Finished SeqHandler: getRegion fastaDna-idx for 6 ms
4446
4457
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4447
4458
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4448
4459
  CONSOLE LOG ENTRY: Running tests
4449
4460
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion category
4450
4461
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion fastaDna-positionNames
4451
- CONSOLE LOG ENTRY: Finished SeqHandler: getRegion fastaDna-positionNames for 9 ms
4462
+ CONSOLE LOG ENTRY: Finished SeqHandler: getRegion fastaDna-positionNames for 11 ms
4452
4463
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4464
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
4453
4465
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4454
4466
  CONSOLE LOG ENTRY: Running tests
4455
4467
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion category
4456
4468
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion helm-idx
4457
- CONSOLE LOG ENTRY: Finished SeqHandler: getRegion helm-idx for 5 ms
4469
+ CONSOLE LOG ENTRY: Finished SeqHandler: getRegion helm-idx for 6 ms
4458
4470
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4459
- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
4460
4471
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4461
4472
  CONSOLE LOG ENTRY: Running tests
4462
4473
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion category
4463
4474
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion helm-positionNames
4464
- CONSOLE LOG ENTRY: Finished SeqHandler: getRegion helm-positionNames for 7 ms
4475
+ CONSOLE LOG ENTRY: Finished SeqHandler: getRegion helm-positionNames for 8 ms
4465
4476
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4466
4477
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4467
4478
  CONSOLE LOG ENTRY: Running tests
4468
4479
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion category
4469
4480
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion separatorPt-idx
4470
- CONSOLE LOG ENTRY: Finished SeqHandler: getRegion separatorPt-idx for 5 ms
4481
+ CONSOLE LOG ENTRY: Finished SeqHandler: getRegion separatorPt-idx for 7 ms
4471
4482
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4472
4483
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4473
4484
  CONSOLE LOG ENTRY: Running tests
4474
4485
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion category
4475
4486
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion separatorPt-positionNames
4476
- CONSOLE LOG ENTRY: Finished SeqHandler: getRegion separatorPt-positionNames for 11 ms
4487
+ CONSOLE LOG ENTRY: Finished SeqHandler: getRegion separatorPt-positionNames for 10 ms
4477
4488
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4478
4489
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4479
4490
  CONSOLE LOG ENTRY: Running tests
@@ -4535,7 +4546,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
4535
4546
  CONSOLE LOG ENTRY: Running tests
4536
4547
  CONSOLE LOG ENTRY: Started SeqHandler category
4537
4548
  CONSOLE LOG ENTRY: Started SeqHandler Seq-Fasta-MSA
4538
- CONSOLE LOG ENTRY: Finished SeqHandler Seq-Fasta-MSA for 12 ms
4549
+ CONSOLE LOG ENTRY: Finished SeqHandler Seq-Fasta-MSA for 13 ms
4539
4550
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4540
4551
  CONSOLE LOG ENTRY: Started SeqHandler: splitted category
4541
4552
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion category
@@ -4591,7 +4602,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
4591
4602
  CONSOLE LOG ENTRY: Running tests
4592
4603
  CONSOLE LOG ENTRY: Started SeqHandler category
4593
4604
  CONSOLE LOG ENTRY: Started SeqHandler Seq-Fasta-units
4594
- CONSOLE LOG ENTRY: Finished SeqHandler Seq-Fasta-units for 8 ms
4605
+ CONSOLE LOG ENTRY: Finished SeqHandler Seq-Fasta-units for 12 ms
4595
4606
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4596
4607
  CONSOLE LOG ENTRY: Started SeqHandler: splitted category
4597
4608
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion category
@@ -4647,7 +4658,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
4647
4658
  CONSOLE LOG ENTRY: Running tests
4648
4659
  CONSOLE LOG ENTRY: Started SeqHandler category
4649
4660
  CONSOLE LOG ENTRY: Started SeqHandler Seq-Fasta
4650
- CONSOLE LOG ENTRY: Finished SeqHandler Seq-Fasta for 16 ms
4661
+ CONSOLE LOG ENTRY: Finished SeqHandler Seq-Fasta for 13 ms
4651
4662
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4652
4663
  CONSOLE LOG ENTRY: Started SeqHandler: splitted category
4653
4664
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion category
@@ -4703,7 +4714,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
4703
4714
  CONSOLE LOG ENTRY: Running tests
4704
4715
  CONSOLE LOG ENTRY: Started SeqHandler category
4705
4716
  CONSOLE LOG ENTRY: Started SeqHandler Seq-Helm
4706
- CONSOLE LOG ENTRY: Finished SeqHandler Seq-Helm for 12 ms
4717
+ CONSOLE LOG ENTRY: Finished SeqHandler Seq-Helm for 7 ms
4707
4718
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4708
4719
  CONSOLE LOG ENTRY: Started SeqHandler: splitted category
4709
4720
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion category
@@ -4755,11 +4766,12 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
4755
4766
  "explicit": [],
4756
4767
  "duplicateMonomerPreferences": {}
4757
4768
  }
4769
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
4758
4770
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4759
4771
  CONSOLE LOG ENTRY: Running tests
4760
4772
  CONSOLE LOG ENTRY: Started SeqHandler category
4761
4773
  CONSOLE LOG ENTRY: Started SeqHandler Seq-UN-auto
4762
- CONSOLE LOG ENTRY: Finished SeqHandler Seq-UN-auto for 9 ms
4774
+ CONSOLE LOG ENTRY: Finished SeqHandler Seq-UN-auto for 8 ms
4763
4775
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4764
4776
  CONSOLE LOG ENTRY: Started SeqHandler: splitted category
4765
4777
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion category
@@ -4811,12 +4823,11 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
4811
4823
  "explicit": [],
4812
4824
  "duplicateMonomerPreferences": {}
4813
4825
  }
4814
- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
4815
4826
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4816
4827
  CONSOLE LOG ENTRY: Running tests
4817
4828
  CONSOLE LOG ENTRY: Started SeqHandler category
4818
4829
  CONSOLE LOG ENTRY: Started SeqHandler Seq-UN
4819
- CONSOLE LOG ENTRY: Finished SeqHandler Seq-UN for 12 ms
4830
+ CONSOLE LOG ENTRY: Finished SeqHandler Seq-UN for 10 ms
4820
4831
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4821
4832
  CONSOLE LOG ENTRY: Started SeqHandler: splitted category
4822
4833
  CONSOLE LOG ENTRY: Started SeqHandler: getRegion category
@@ -4872,7 +4883,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
4872
4883
  CONSOLE LOG ENTRY: Running tests
4873
4884
  CONSOLE LOG ENTRY: Started SeqHandler: splitted category
4874
4885
  CONSOLE LOG ENTRY: Started SeqHandler: splitted fastaMsa
4875
- CONSOLE LOG ENTRY: Finished SeqHandler: splitted fastaMsa for 7 ms
4886
+ CONSOLE LOG ENTRY: Finished SeqHandler: splitted fastaMsa for 8 ms
4876
4887
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4877
4888
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4878
4889
  CONSOLE LOG ENTRY: Running tests
@@ -4884,7 +4895,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
4884
4895
  CONSOLE LOG ENTRY: Running tests
4885
4896
  CONSOLE LOG ENTRY: Started SeqHandler: splitted category
4886
4897
  CONSOLE LOG ENTRY: Started SeqHandler: splitted helm
4887
- CONSOLE LOG ENTRY: Finished SeqHandler: splitted helm for 7 ms
4898
+ CONSOLE LOG ENTRY: Finished SeqHandler: splitted helm for 5 ms
4888
4899
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4889
4900
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4890
4901
  CONSOLE LOG ENTRY: Running tests
@@ -4896,7 +4907,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
4896
4907
  CONSOLE LOG ENTRY: Running tests
4897
4908
  CONSOLE LOG ENTRY: Started SeqHandler: splitted category
4898
4909
  CONSOLE LOG ENTRY: Started SeqHandler: splitted separator
4899
- CONSOLE LOG ENTRY: Finished SeqHandler: splitted separator for 7 ms
4910
+ CONSOLE LOG ENTRY: Finished SeqHandler: splitted separator for 9 ms
4900
4911
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4901
4912
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4902
4913
  CONSOLE LOG ENTRY: Running tests
@@ -4906,14 +4917,14 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
4906
4917
  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/scatter-plot.md
4907
4918
  CONSOLE LOG REQUEST: 404, http://localhost:8080/uploads/youtube/visualizations2.png
4908
4919
  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4920
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/scatter-plot-regression-line.png
4909
4921
  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-colors-sizes-markers-labels-thumb.png
4910
4922
  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4911
4923
  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-zoom-and-pack-thumb.png
4912
4924
  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4925
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
4913
4926
  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-selection-thumb.png
4914
4927
  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4915
- CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
4916
- CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/scatter-plot-regression-line.png
4917
4928
  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/group-tooltip-thumb.png
4918
4929
  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4919
4930
  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-labels-thumb.png
@@ -4924,11 +4935,11 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/scatt
4924
4935
  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/viewers/scatter-plot-molecules.png
4925
4936
  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/webgpu-scatterplot-thumb.png
4926
4937
  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4927
- CONSOLE LOG ENTRY: knn graph: 62.56884765625 ms
4938
+ CONSOLE LOG ENTRY: knn graph: 72.876953125 ms
4928
4939
  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/concepts/table.md
4929
4940
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
4930
- CONSOLE LOG ENTRY: fit: 3132.504150390625 ms
4931
- CONSOLE LOG ENTRY: Finished sequenceSpace sequenceSpaceOpens for 3778 ms
4941
+ CONSOLE LOG ENTRY: fit: 3103.365966796875 ms
4942
+ CONSOLE LOG ENTRY: Finished sequenceSpace sequenceSpaceOpens for 3707 ms
4932
4943
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4933
4944
  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/datagrok.md
4934
4945
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
@@ -4937,9 +4948,10 @@ CONSOLE LOG ENTRY: Started sequenceSpace category
4937
4948
  CONSOLE LOG ENTRY: Started sequenceSpace sequenceSpaceWithEmptyRows
4938
4949
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2F100_3_clustests_empty_vals.csv?&&flag=9
4939
4950
  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/scatter-plot.md
4940
- CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
4941
4951
  CONSOLE LOG REQUEST: 404, http://localhost:8080/uploads/youtube/visualizations2.png
4942
4952
  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4953
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/scatter-plot-regression-line.png
4954
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/%7Brequire('./img/formula-lines-thumb.png').default%7D
4943
4955
  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-colors-sizes-markers-labels-thumb.png
4944
4956
  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4945
4957
  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-zoom-and-pack-thumb.png
@@ -4948,16 +4960,18 @@ CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatt
4948
4960
  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4949
4961
  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/group-tooltip-thumb.png
4950
4962
  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4951
- CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-labels-thumb.png
4952
- CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4953
4963
  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-jitter-thumb.png
4954
4964
  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4965
+ CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/scatter-plot-labels-thumb.png
4966
+ CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4967
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/scatter-plot-lines.png
4955
4968
  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/img/webgpu-scatterplot-thumb.png
4956
4969
  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4957
- CONSOLE LOG ENTRY: knn graph: 52.095947265625 ms
4970
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/uploads/viewers/scatter-plot-molecules.png
4971
+ CONSOLE LOG ENTRY: knn graph: 148.95703125 ms
4958
4972
  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/concepts/table.md
4959
- CONSOLE LOG ENTRY: fit: 3006.545166015625 ms
4960
- CONSOLE LOG ENTRY: Finished sequenceSpace sequenceSpaceWithEmptyRows for 3572 ms
4973
+ CONSOLE LOG ENTRY: fit: 3140.97900390625 ms
4974
+ CONSOLE LOG ENTRY: Finished sequenceSpace sequenceSpaceWithEmptyRows for 4166 ms
4961
4975
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4962
4976
  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/datagrok.md
4963
4977
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
@@ -4971,7 +4985,7 @@ CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/sequence-
4971
4985
  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4972
4986
  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/sequence-diversity-search.mdx
4973
4987
  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4974
- CONSOLE LOG ENTRY: Finished similarity/diversity diversitySearchViewer for 386 ms
4988
+ CONSOLE LOG ENTRY: Finished similarity/diversity diversitySearchViewer for 322 ms
4975
4989
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4976
4990
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4977
4991
  CONSOLE LOG ENTRY: Running tests
@@ -4984,7 +4998,7 @@ CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/sequence-
4984
4998
  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4985
4999
  CONSOLE LOG REQUEST: 404, http://localhost:8080/help/visualize/viewers/sequence-similarity-search.mdx
4986
5000
  CONSOLE LOG ENTRY: Failed to load resource: the server responded with a status of 404 (Not Found)
4987
- CONSOLE LOG ENTRY: Finished similarity/diversity similaritySearchViewer for 369 ms
5001
+ CONSOLE LOG ENTRY: Finished similarity/diversity similaritySearchViewer for 454 ms
4988
5002
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4989
5003
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
4990
5004
  CONSOLE LOG ENTRY: Running tests
@@ -5040,7 +5054,6 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
5040
5054
  "explicit": [],
5041
5055
  "duplicateMonomerPreferences": {}
5042
5056
  }
5043
- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
5044
5057
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
5045
5058
  CONSOLE LOG ENTRY: Running tests
5046
5059
  CONSOLE LOG ENTRY: Started splitters category
@@ -5125,7 +5138,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
5125
5138
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
5126
5139
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
5127
5140
  CONSOLE LOG ENTRY: Started splitters getHelmMonomers
5128
- CONSOLE LOG ENTRY: Finished splitters getHelmMonomers for 28 ms
5141
+ CONSOLE LOG ENTRY: Finished splitters getHelmMonomers for 8 ms
5129
5142
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
5130
5143
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
5131
5144
  {
@@ -5179,7 +5192,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
5179
5192
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
5180
5193
  CONSOLE LOG ENTRY: Started splitters helm1
5181
5194
  CONSOLE LOG ENTRY: Bio: tests: splitters: src="PEPTIDE1{meI.hHis.Aca.N.T.dE.Thr_PO3H2.Aca.D-Tyr_Et.Tyr_ab-dehydroMe.dV.E.N.D-Orn.D-aThr.Phe_4Me}$$$", res={"mList":["meI","hHis","Aca","N","T","dE","Thr_PO3H2","Aca","D-Tyr_Et","Tyr_ab-dehydroMe","dV","E","N","D-Orn","D-aThr","Phe_4Me"],"gapOriginalMonomer":"*"} .
5182
- CONSOLE LOG ENTRY: Finished splitters helm1 for 2 ms
5195
+ CONSOLE LOG ENTRY: Finished splitters helm1 for 1 ms
5183
5196
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
5184
5197
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
5185
5198
  {
@@ -5341,7 +5354,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
5341
5354
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
5342
5355
  CONSOLE LOG ENTRY: Started splitters splitToMonomers
5343
5356
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fsamples%2FMSA.csv?&&flag=9
5344
- CONSOLE LOG ENTRY: Finished splitters splitToMonomers for 1127 ms
5357
+ CONSOLE LOG ENTRY: Finished splitters splitToMonomers for 234 ms
5345
5358
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
5346
5359
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
5347
5360
  {
@@ -5364,6 +5377,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
5364
5377
  "explicit": [],
5365
5378
  "duplicateMonomerPreferences": {}
5366
5379
  }
5380
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
5367
5381
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
5368
5382
  CONSOLE LOG ENTRY: Running tests
5369
5383
  CONSOLE LOG ENTRY: Started splitters category
@@ -5472,7 +5486,6 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
5472
5486
  "explicit": [],
5473
5487
  "duplicateMonomerPreferences": {}
5474
5488
  }
5475
- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
5476
5489
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
5477
5490
  CONSOLE LOG ENTRY: Running tests
5478
5491
  CONSOLE LOG ENTRY: Started splitters category
@@ -5557,7 +5570,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
5557
5570
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
5558
5571
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
5559
5572
  CONSOLE LOG ENTRY: Started toAtomicLevel-ui fasta-linear
5560
- CONSOLE LOG ENTRY: Finished toAtomicLevel-ui fasta-linear for 57 ms
5573
+ CONSOLE LOG ENTRY: Finished toAtomicLevel-ui fasta-linear for 55 ms
5561
5574
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
5562
5575
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
5563
5576
  {
@@ -5610,7 +5623,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
5610
5623
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
5611
5624
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
5612
5625
  CONSOLE LOG ENTRY: Started toAtomicLevel-ui fasta-with-gap-linear
5613
- CONSOLE LOG ENTRY: Finished toAtomicLevel-ui fasta-with-gap-linear for 41 ms
5626
+ CONSOLE LOG ENTRY: Finished toAtomicLevel-ui fasta-with-gap-linear for 24 ms
5614
5627
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
5615
5628
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
5616
5629
  {
@@ -5663,7 +5676,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
5663
5676
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
5664
5677
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
5665
5678
  CONSOLE LOG ENTRY: Started toAtomicLevel-ui helm-linear
5666
- CONSOLE LOG ENTRY: Finished toAtomicLevel-ui helm-linear for 41 ms
5679
+ CONSOLE LOG ENTRY: Finished toAtomicLevel-ui helm-linear for 34 ms
5667
5680
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
5668
5681
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
5669
5682
  {
@@ -5716,7 +5729,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
5716
5729
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
5717
5730
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
5718
5731
  CONSOLE LOG ENTRY: Started toAtomicLevel-ui helm-with-gap-linear
5719
- CONSOLE LOG ENTRY: Finished toAtomicLevel-ui helm-with-gap-linear for 46 ms
5732
+ CONSOLE LOG ENTRY: Finished toAtomicLevel-ui helm-with-gap-linear for 33 ms
5720
5733
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
5721
5734
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
5722
5735
  {
@@ -5777,7 +5790,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
5777
5790
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-input.csv?&&flag=9
5778
5791
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-output.csv?&&flag=9
5779
5792
  CONSOLE LOG ENTRY: Started toAtomicLevel dna-fasta
5780
- CONSOLE LOG ENTRY: Finished toAtomicLevel dna-fasta for 195 ms
5793
+ CONSOLE LOG ENTRY: Finished toAtomicLevel dna-fasta for 83 ms
5781
5794
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
5782
5795
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
5783
5796
  {
@@ -5848,6 +5861,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
5848
5861
  "explicit": [],
5849
5862
  "duplicateMonomerPreferences": {}
5850
5863
  }
5864
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
5851
5865
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
5852
5866
  CONSOLE LOG ENTRY: Running tests
5853
5867
  CONSOLE LOG ENTRY: Started toAtomicLevel category
@@ -5886,7 +5900,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
5886
5900
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-input.csv?&&flag=9
5887
5901
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-output.csv?&&flag=9
5888
5902
  CONSOLE LOG ENTRY: Started toAtomicLevel fastaDna
5889
- CONSOLE LOG ENTRY: Finished toAtomicLevel fastaDna for 53 ms
5903
+ CONSOLE LOG ENTRY: Finished toAtomicLevel fastaDna for 48 ms
5890
5904
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
5891
5905
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
5892
5906
  {
@@ -5957,7 +5971,6 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
5957
5971
  "explicit": [],
5958
5972
  "duplicateMonomerPreferences": {}
5959
5973
  }
5960
- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
5961
5974
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
5962
5975
  CONSOLE LOG ENTRY: Running tests
5963
5976
  CONSOLE LOG ENTRY: Started toAtomicLevel category
@@ -5996,7 +6009,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
5996
6009
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-input.csv?&&flag=9
5997
6010
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-output.csv?&&flag=9
5998
6011
  CONSOLE LOG ENTRY: Started toAtomicLevel fastaPt
5999
- CONSOLE LOG ENTRY: Finished toAtomicLevel fastaPt for 44 ms
6012
+ CONSOLE LOG ENTRY: Finished toAtomicLevel fastaPt for 50 ms
6000
6013
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
6001
6014
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
6002
6015
  {
@@ -6105,7 +6118,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
6105
6118
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-input.csv?&&flag=9
6106
6119
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-output.csv?&&flag=9
6107
6120
  CONSOLE LOG ENTRY: Started toAtomicLevel fastaRna
6108
- CONSOLE LOG ENTRY: Finished toAtomicLevel fastaRna for 41 ms
6121
+ CONSOLE LOG ENTRY: Finished toAtomicLevel fastaRna for 28 ms
6109
6122
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
6110
6123
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
6111
6124
  {
@@ -6214,7 +6227,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
6214
6227
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-input.csv?&&flag=9
6215
6228
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-output.csv?&&flag=9
6216
6229
  CONSOLE LOG ENTRY: Started toAtomicLevel fastaUn
6217
- CONSOLE LOG ENTRY: Finished toAtomicLevel fastaUn for 46 ms
6230
+ CONSOLE LOG ENTRY: Finished toAtomicLevel fastaUn for 36 ms
6218
6231
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
6219
6232
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
6220
6233
  {
@@ -6323,7 +6336,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
6323
6336
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-input.csv?&&flag=9
6324
6337
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-output.csv?&&flag=9
6325
6338
  CONSOLE LOG ENTRY: Started toAtomicLevel helm
6326
- CONSOLE LOG ENTRY: Finished toAtomicLevel helm for 26 ms
6339
+ CONSOLE LOG ENTRY: Finished toAtomicLevel helm for 35 ms
6327
6340
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
6328
6341
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
6329
6342
  {
@@ -6432,7 +6445,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
6432
6445
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-input.csv?&&flag=9
6433
6446
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-output.csv?&&flag=9
6434
6447
  CONSOLE LOG ENTRY: Started toAtomicLevel msa-fasta
6435
- CONSOLE LOG ENTRY: Finished toAtomicLevel msa-fasta for 40 ms
6448
+ CONSOLE LOG ENTRY: Finished toAtomicLevel msa-fasta for 36 ms
6436
6449
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
6437
6450
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
6438
6451
  {
@@ -6541,7 +6554,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
6541
6554
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-input.csv?&&flag=9
6542
6555
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-output.csv?&&flag=9
6543
6556
  CONSOLE LOG ENTRY: Started toAtomicLevel msa-separator
6544
- CONSOLE LOG ENTRY: Finished toAtomicLevel msa-separator for 66 ms
6557
+ CONSOLE LOG ENTRY: Finished toAtomicLevel msa-separator for 54 ms
6545
6558
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
6546
6559
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
6547
6560
  {
@@ -6612,6 +6625,7 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
6612
6625
  "explicit": [],
6613
6626
  "duplicateMonomerPreferences": {}
6614
6627
  }
6628
+ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
6615
6629
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
6616
6630
  CONSOLE LOG ENTRY: Running tests
6617
6631
  CONSOLE LOG ENTRY: Started toAtomicLevel category
@@ -6650,7 +6664,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
6650
6664
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-input.csv?&&flag=9
6651
6665
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-output.csv?&&flag=9
6652
6666
  CONSOLE LOG ENTRY: Started toAtomicLevel peptides-fasta
6653
- CONSOLE LOG ENTRY: Finished toAtomicLevel peptides-fasta for 126 ms
6667
+ CONSOLE LOG ENTRY: Finished toAtomicLevel peptides-fasta for 117 ms
6654
6668
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
6655
6669
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
6656
6670
  {
@@ -6698,7 +6712,6 @@ CONSOLE LOG ENTRY: Bio: getUserLibSettings()
6698
6712
  "exclude": [],
6699
6713
  "duplicateMonomerPreferences": {}
6700
6714
  }
6701
- CONSOLE LOG REQUEST: 200, http://localhost:8080/api/user_settings_storage/Libraries?currentUser=true
6702
6715
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2FHELMCoreLibrary.json?&&flag=10
6703
6716
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Fmonomer-libraries%2F%2Fpolytool-lib.json?&&flag=10
6704
6717
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
@@ -6761,7 +6774,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
6761
6774
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-output.csv?&&flag=9
6762
6775
  CONSOLE LOG ENTRY: Started toAtomicLevel ptFasta2
6763
6776
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-pt-fasta-2.mol?&&flag=9
6764
- CONSOLE LOG ENTRY: Finished toAtomicLevel ptFasta2 for 29 ms
6777
+ CONSOLE LOG ENTRY: Finished toAtomicLevel ptFasta2 for 34 ms
6765
6778
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
6766
6779
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
6767
6780
  {
@@ -6870,10 +6883,10 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
6870
6883
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-input.csv?&&flag=9
6871
6884
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-output.csv?&&flag=9
6872
6885
  CONSOLE LOG ENTRY: Started toAtomicLevel separatorDna
6873
- CONSOLE LOG ENTRY: Finished toAtomicLevel separatorDna for 43 ms
6886
+ CONSOLE LOG ENTRY: Finished toAtomicLevel separatorDna for 20 ms
6874
6887
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
6875
6888
  CONSOLE LOG ENTRY: Started toAtomicLevel separatorDna
6876
- CONSOLE LOG ENTRY: Finished toAtomicLevel separatorDna for 58 ms
6889
+ CONSOLE LOG ENTRY: Finished toAtomicLevel separatorDna for 30 ms
6877
6890
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
6878
6891
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
6879
6892
  {
@@ -6982,10 +6995,10 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
6982
6995
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-input.csv?&&flag=9
6983
6996
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-output.csv?&&flag=9
6984
6997
  CONSOLE LOG ENTRY: Started toAtomicLevel separatorDna
6985
- CONSOLE LOG ENTRY: Finished toAtomicLevel separatorDna for 35 ms
6998
+ CONSOLE LOG ENTRY: Finished toAtomicLevel separatorDna for 50 ms
6986
6999
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
6987
7000
  CONSOLE LOG ENTRY: Started toAtomicLevel separatorDna
6988
- CONSOLE LOG ENTRY: Finished toAtomicLevel separatorDna for 27 ms
7001
+ CONSOLE LOG ENTRY: Finished toAtomicLevel separatorDna for 32 ms
6989
7002
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
6990
7003
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
6991
7004
  {
@@ -7094,7 +7107,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
7094
7107
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-input.csv?&&flag=9
7095
7108
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-output.csv?&&flag=9
7096
7109
  CONSOLE LOG ENTRY: Started toAtomicLevel separatorPt
7097
- CONSOLE LOG ENTRY: Finished toAtomicLevel separatorPt for 91 ms
7110
+ CONSOLE LOG ENTRY: Finished toAtomicLevel separatorPt for 42 ms
7098
7111
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7099
7112
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
7100
7113
  {
@@ -7203,7 +7216,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/Syste
7203
7216
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-input.csv?&&flag=9
7204
7217
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/connectors/connections/System.AppData/file/Bio%2Ftests%2Fto-atomic-level-msa-fasta-output.csv?&&flag=9
7205
7218
  CONSOLE LOG ENTRY: Started toAtomicLevel separatorUn
7206
- CONSOLE LOG ENTRY: Finished toAtomicLevel separatorUn for 36 ms
7219
+ CONSOLE LOG ENTRY: Finished toAtomicLevel separatorUn for 26 ms
7207
7220
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7208
7221
  CONSOLE LOG ENTRY: Bio: setUserLibSettings()
7209
7222
  {
@@ -7303,20 +7316,20 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/help/visualize/viewers/img/web-l
7303
7316
  CONSOLE LOG ENTRY: js viewer initialized
7304
7317
  CONSOLE LOG ENTRY: js viewer initialized
7305
7318
  CONSOLE LOG ENTRY: js viewer initialized
7306
- CONSOLE LOG ENTRY: Finished WebLogo.layout fasta for 247 ms
7319
+ CONSOLE LOG ENTRY: Finished WebLogo.layout fasta for 301 ms
7307
7320
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7308
7321
  CONSOLE LOG REQUEST: 200, http://localhost:8080/help/datagrok/datagrok.md
7309
7322
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7310
7323
  CONSOLE LOG ENTRY: Running tests
7311
7324
  CONSOLE LOG ENTRY: Started WebLogo.monomerToShort category
7312
7325
  CONSOLE LOG ENTRY: Started WebLogo.monomerToShort longMonomerComplexFirstPartLong56
7313
- CONSOLE LOG ENTRY: Finished WebLogo.monomerToShort longMonomerComplexFirstPartLong56 for 1 ms
7326
+ CONSOLE LOG ENTRY: Finished WebLogo.monomerToShort longMonomerComplexFirstPartLong56 for 0 ms
7314
7327
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7315
7328
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7316
7329
  CONSOLE LOG ENTRY: Running tests
7317
7330
  CONSOLE LOG ENTRY: Started WebLogo.monomerToShort category
7318
7331
  CONSOLE LOG ENTRY: Started WebLogo.monomerToShort longMonomerComplexFirstPartShort
7319
- CONSOLE LOG ENTRY: Finished WebLogo.monomerToShort longMonomerComplexFirstPartShort for 0 ms
7332
+ CONSOLE LOG ENTRY: Finished WebLogo.monomerToShort longMonomerComplexFirstPartShort for 1 ms
7320
7333
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7321
7334
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7322
7335
  CONSOLE LOG ENTRY: Running tests
@@ -7340,7 +7353,7 @@ CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=
7340
7353
  CONSOLE LOG ENTRY: Running tests
7341
7354
  CONSOLE LOG ENTRY: Started WebLogo.monomerToShort category
7342
7355
  CONSOLE LOG ENTRY: Started WebLogo.monomerToShort monomerToShort
7343
- CONSOLE LOG ENTRY: Finished WebLogo.monomerToShort monomerToShort for 0 ms
7356
+ CONSOLE LOG ENTRY: Finished WebLogo.monomerToShort monomerToShort for 1 ms
7344
7357
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7345
7358
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7346
7359
  CONSOLE LOG ENTRY: Running tests
@@ -7348,7 +7361,7 @@ CONSOLE LOG ENTRY: Started WebLogo.positions category
7348
7361
  CONSOLE LOG ENTRY: Started WebLogo.positions allPositions
7349
7362
  CONSOLE LOG ENTRY: js viewer initialized
7350
7363
  CONSOLE LOG ENTRY: js viewer initialized
7351
- CONSOLE LOG ENTRY: Finished WebLogo.positions allPositions for 111 ms
7364
+ CONSOLE LOG ENTRY: Finished WebLogo.positions allPositions for 117 ms
7352
7365
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7353
7366
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7354
7367
  CONSOLE LOG ENTRY: Running tests
@@ -7356,7 +7369,7 @@ CONSOLE LOG ENTRY: Started WebLogo.positions category
7356
7369
  CONSOLE LOG ENTRY: Started WebLogo.positions count sequences for monomer at position
7357
7370
  CONSOLE LOG ENTRY: js viewer initialized
7358
7371
  CONSOLE LOG ENTRY: js viewer initialized
7359
- CONSOLE LOG ENTRY: Finished WebLogo.positions count sequences for monomer at position for 100 ms
7372
+ CONSOLE LOG ENTRY: Finished WebLogo.positions count sequences for monomer at position for 107 ms
7360
7373
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7361
7374
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7362
7375
  CONSOLE LOG ENTRY: Running tests
@@ -7364,7 +7377,7 @@ CONSOLE LOG ENTRY: Started WebLogo.positions category
7364
7377
  CONSOLE LOG ENTRY: Started WebLogo.positions empty
7365
7378
  CONSOLE LOG ENTRY: js viewer initialized
7366
7379
  CONSOLE LOG ENTRY: js viewer initialized
7367
- CONSOLE LOG ENTRY: Finished WebLogo.positions empty for 93 ms
7380
+ CONSOLE LOG ENTRY: Finished WebLogo.positions empty for 96 ms
7368
7381
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7369
7382
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7370
7383
  CONSOLE LOG ENTRY: Running tests
@@ -7372,7 +7385,7 @@ CONSOLE LOG ENTRY: Started WebLogo.positions category
7372
7385
  CONSOLE LOG ENTRY: Started WebLogo.positions positions with shrinkEmptyTail option true (filtered)
7373
7386
  CONSOLE LOG ENTRY: js viewer initialized
7374
7387
  CONSOLE LOG ENTRY: js viewer initialized
7375
- CONSOLE LOG ENTRY: Finished WebLogo.positions positions with shrinkEmptyTail option true (filtered) for 114 ms
7388
+ CONSOLE LOG ENTRY: Finished WebLogo.positions positions with shrinkEmptyTail option true (filtered) for 112 ms
7376
7389
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7377
7390
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7378
7391
  CONSOLE LOG ENTRY: Running tests
@@ -7380,7 +7393,7 @@ CONSOLE LOG ENTRY: Started WebLogo.positions category
7380
7393
  CONSOLE LOG ENTRY: Started WebLogo.positions positions with skipEmptyPositions option
7381
7394
  CONSOLE LOG ENTRY: js viewer initialized
7382
7395
  CONSOLE LOG ENTRY: js viewer initialized
7383
- CONSOLE LOG ENTRY: Finished WebLogo.positions positions with skipEmptyPositions option for 106 ms
7396
+ CONSOLE LOG ENTRY: Finished WebLogo.positions positions with skipEmptyPositions option for 110 ms
7384
7397
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7385
7398
  CONSOLE LOG REQUEST: 200, http://localhost:8080/api/log/tests/package?benchmark=false
7386
7399
  CONSOLE LOG ENTRY: Running tests