@datagrok/bio 2.15.2 → 2.15.3

package/package.json

@@ -5,7 +5,7 @@
     "name": "Aleksandr Tanas",
     "email": "atanas@datagrok.ai"
   },
-  "version": "2.15.2",
+  "version": "2.15.3",
   "description": "Bioinformatics support (import/export of sequences, conversion, visualization, analysis). [See more](https://github.com/datagrok-ai/public/blob/master/packages/Bio/README.md) for details.",
   "repository": {
     "type": "git",
@@ -37,7 +37,7 @@
   ],
   "dependencies": {
     "@biowasm/aioli": "^3.1.0",
-    "@datagrok-libraries/bio": "^5.43.0",
+    "@datagrok-libraries/bio": "^5.43.1",
     "@datagrok-libraries/chem-meta": "^1.2.5",
     "@datagrok-libraries/math": "^1.2.0",
     "@datagrok-libraries/ml": "^6.7.1",

package/src/package-test.ts

@@ -2,7 +2,7 @@ import * as grok from 'datagrok-api/grok';
 import * as ui from 'datagrok-api/ui';
 import * as DG from 'datagrok-api/dg';
 
-import {runTests, TestContext, tests} from '@datagrok-libraries/utils/src/test';
+import {runTests, TestContext, tests, initAutoTests as initTests } from '@datagrok-libraries/utils/src/test';
 
 import './tests/_first-tests';
 import './tests/Palettes-test';
@@ -52,3 +52,8 @@ export async function test(category: string, test: string, testContext: TestCont
   const data = await runTests({category, test, testContext, stressTest});
   return DG.DataFrame.fromObjects(data)!;
 }
+
+//name: initAutoTests
+export async function initAutoTests() {
+  await initTests(_package, _package.getModule('package-test.js'));
+}

package/src/utils/monomer-cell-renderer.ts

@@ -4,7 +4,8 @@ import * as ui from 'datagrok-api/ui';
 
 import {PolymerType} from '@datagrok-libraries/bio/src/helm/types';
 import {ALPHABET, getPaletteByType, monomerToShort} from '@datagrok-libraries/bio/src/utils/macromolecule';
-import {TAGS as bioTAGS} from '@datagrok-libraries/bio/src/utils/macromolecule/consts';
+import {TAGS as bioTAGS, } from '@datagrok-libraries/bio/src/utils/macromolecule/consts';
+import {MONOMER_RENDERER_TAGS} from '@datagrok-libraries/bio/src/utils/cell-renderer';
 import {MonomerWorks} from '@datagrok-libraries/bio/src/monomer-works/monomer-works';
 
 import * as C from './constants';
@@ -92,7 +93,7 @@ export class MonomerCellRenderer extends DG.GridCellRenderer {
   ): void {
     if (gridCell.gridRow < 0) return;
     MonomerTooltipHandler.getOrCreate(gridCell.gridColumn);
-
+    const applyToBackground = gridCell.cell?.column && gridCell.cell.column.getTag(MONOMER_RENDERER_TAGS.applyToBackground) === 'true';
 
     g.font = `12px monospace`;
     g.textBaseline = 'middle';
@@ -103,11 +104,14 @@ export class MonomerCellRenderer extends DG.GridCellRenderer {
     if (!s)
       return;
     const color = palette.get(s);
-
-    g.fillStyle = color;
     //cell width of monomer should dictate how many characters can be displayed
     // for width 40, 6 characters can be displayed (0.15 is 6 / 40)
     const maxChars = Math.max(2, Math.floor(w * 0.15));
+    g.fillStyle = color;
+    if (applyToBackground) {
+      g.fillRect(x, y, w, h);
+      g.fillStyle = DG.Color.toHtml(DG.Color.getContrastColor(DG.Color.fromHtml(color)));
+    }
     g.fillText(monomerToShort(s, maxChars), x + (w / 2), y + (h / 2), w);
   }
 }