@datagrok/bio 2.11.28 → 2.11.30

package/src/widgets/bio-substructure-filter.ts

@@ -9,43 +9,73 @@ import * as DG from 'datagrok-api/dg';
 import * as grok from 'datagrok-api/grok';
 
 import wu from 'wu';
-import {fromEvent, Subject, Subscription, Unsubscribable} from 'rxjs';
-import {debounceTime} from 'rxjs/operators';
+import $ from 'cash-dom';
+import {fromEvent, Observable, Subject, Subscription, Unsubscribable} from 'rxjs';
 
 import {TAGS as bioTAGS, NOTATION} from '@datagrok-libraries/bio/src/utils/macromolecule';
-import {errInfo, errStack} from '@datagrok-libraries/bio/src/utils/err-info';
-import {delay} from '@datagrok-libraries/utils/src/test';
-import {IHelmWebEditor} from '@datagrok-libraries/bio/src/types/editor';
+import {errInfo} from '@datagrok-libraries/bio/src/utils/err-info';
+import {delay, testEvent} from '@datagrok-libraries/utils/src/test';
+import {getHelmHelper} from '@datagrok-libraries/bio/src/helm/helm-helper';
+import {IHelmWebEditor, IWebEditorApp} from '@datagrok-libraries/bio/src/helm/types';
+import {UnitsHandler} from '@datagrok-libraries/bio/src/utils/units-handler';
+import {IRenderer} from '@datagrok-libraries/bio/src/types/renderer';
+import {ILogger} from '@datagrok-libraries/bio/src/utils/logger';
+import {PromiseSyncer} from '@datagrok-libraries/bio/src/utils/syncer';
 
 import {helmSubstructureSearch, linearSubstructureSearch} from '../substructure-search/substructure-search';
 import {updateDivInnerHTML} from '../utils/ui-utils';
+import {BioFilterBase, BioFilterProps, IBioFilter, IFilterProps} from './bio-substructure-filter-types';
+import {HelmBioFilter} from './bio-substructure-filter-helm';
 
 import {_package} from '../package';
 
-export class BioSubstructureFilter extends DG.Filter {
-  bioFilter: BioFilterBase | null = null;
+const FILTER_SYNC_EVENT: string = 'bio-substructure-filter';
+
+class FilterState {
+  constructor(
+    public readonly props: IFilterProps,
+    public readonly filterId: number,
+    public readonly dataFrameId: string,
+    public readonly columnName: string,
+    public readonly bitset: DG.BitSet | null,
+  ) {}
+}
+
+export class SeparatorFilterProps extends BioFilterProps {
+  constructor(
+    substructure: string,
+    public separator?: string
+  ) {
+    super(substructure);
+  }
+}
+
+export class BioSubstructureFilter extends DG.Filter implements IRenderer {
+  bioFilter: IBioFilter | null = null;
   bitset: DG.BitSet | null = null;
-  loader: HTMLDivElement = ui.loader();
-  onBioFilterChangedSubs?: Subscription;
+  readonly loader: HTMLDivElement;
   notation: string | undefined = undefined;
 
+  readonly logger: ILogger;
+  readonly filterSyncer: PromiseSyncer;
+
   get calculating(): boolean { return this.loader.style.display == 'initial'; }
 
   set calculating(value: boolean) { this.loader.style.display = value ? 'initial' : 'none'; }
 
   get filterSummary(): string {
-    return this.bioFilter!.substructure;
+    return this.bioFilter!.filterSummary;
   }
 
   get isFiltering(): boolean {
-    return super.isFiltering && this.bioFilter!.substructure !== '';
+    return super.isFiltering && (this.bioFilter?.isFiltering ?? false);
   }
 
   get isReadyToApplyFilter(): boolean {
     return !this.calculating && this.bitset != null;
   }
 
-  get _debounceTime(): number {
+  get debounceTime(): number {
     if (this.column == null)
       return 1000;
     const length = this.column.length;
@@ -54,44 +84,85 @@ export class BioSubstructureFilter extends DG.Filter {
     const msecMax = 1000;
     if (length < minLength) return 0;
     if (length > maxLength) return msecMax;
-    return Math.floor(msecMax * ((length - minLength) / (maxLength - minLength)));
+    const res = Math.floor(msecMax * ((length - minLength) / (maxLength - minLength)));
+    return res;
   }
 
-  //column name setter overload
-
   constructor() {
     super();
     this.root = ui.divV([]);
+    this.loader = ui.loader();
     this.calculating = false;
+    this.filterSyncer = new PromiseSyncer(this.logger = _package.logger);
+
+    return new Proxy(this, {
+      set(target: any, key, value) {
+        if (key === 'column') {
+          const k = 42;
+        }
+        target[key] = value;
+        return true;
+      }
+    });
   }
 
+  private static filterCounter: number = -1;
+  private readonly filterId: number = ++BioSubstructureFilter.filterCounter;
+
+  private filterToLog(): string { return `BioSubstructureFilter<${this.filterId}>`; }
+
+
+  private viewSubs: Unsubscribable[] = [];
+
   attach(dataFrame: DG.DataFrame): void {
-    super.attach(dataFrame);
-    this.column = dataFrame.columns.bySemType(DG.SEMTYPE.MACROMOLECULE);
-    this.columnName ??= this.column?.name;
-    this.notation ??= this.column?.getTag(DG.TAGS.UNITS);
-    this.bioFilter = this.notation === NOTATION.FASTA ?
-      new FastaFilter() : this.notation === NOTATION.SEPARATOR ?
-        new SeparatorFilter(this.column!.getTag(bioTAGS.separator)) : new HelmFilter();
-    this.root.appendChild(this.bioFilter!.filterPanel);
-    this.root.appendChild(this.loader);
-
-    this.onBioFilterChangedSubs?.unsubscribe();
-
-    let onChangedEvent: any = this.bioFilter.onChanged;
-    onChangedEvent = onChangedEvent.pipe(debounceTime(this._debounceTime));
-    this.onBioFilterChangedSubs = onChangedEvent.subscribe(async (_: any) => await this._onInputChanged());
-
-    this.subs.push(grok.events.onResetFilterRequest.subscribe((_value: any) => {
-      this.bioFilter?.resetFilter();
-    }));
+    const superAttach = super.attach.bind(this);
+    const logPrefix = `${this.filterToLog()}.attach()`;
+    this.filterSyncer.sync(logPrefix, async () => {
+      superAttach(dataFrame);
+      this.column = dataFrame.columns.bySemType(DG.SEMTYPE.MACROMOLECULE);
+      const uh = UnitsHandler.getOrCreate(this.column!);
+      this.columnName ??= this.column?.name;
+      this.notation ??= this.column?.getTag(DG.TAGS.UNITS);
+
+      this.bioFilter = this.notation === NOTATION.FASTA ?
+        new FastaBioFilter() : this.notation === NOTATION.SEPARATOR ?
+          new SeparatorBioFilter(this.column!.getTag(bioTAGS.separator)) : new HelmBioFilter();
+      this.root.appendChild(this.bioFilter!.filterPanel);
+      this.root.appendChild(this.loader);
+      await this.bioFilter.attach(); // may await waitForElementInDom
+
+      this.viewSubs.push(DG.debounce(this.bioFilter!.onChanged, this.debounceTime)
+        .subscribe(this.bioFilterOnChangedDebounced.bind(this)));
+      this.viewSubs.push(grok.events.onResetFilterRequest
+        .subscribe((_value: any) => { this.bioFilter?.resetFilter(); }));
+      this.viewSubs.push(grok.events.onCustomEvent(FILTER_SYNC_EVENT)
+        .subscribe(this.filterOnSync.bind(this)));
+    });
   }
 
   detach() {
-    if (this.bioFilter) this.bioFilter.detach();
-    super.detach();
+    const superDetach = super.detach.bind(this);
+    const logPrefix = `${this.filterToLog()}.detach()`;
+    this.filterSyncer.sync(logPrefix, async () => {
+      for (const sub of this.viewSubs) sub.unsubscribe();
+      this.viewSubs = [];
+      superDetach(); // requests this.isFiltering
+      if (this.bioFilter) this.bioFilter.detach();
+      this.bioFilter = null;
+    });
   }
 
+  // -- Sync -
+
+  private filterOnSync(state: FilterState): void {
+    if (state.filterId === this.filterId) return;
+    if (state.dataFrameId !== this.dataFrame!.id || state.columnName !== this.columnName) return;
+
+    this.bioFilter!.props = state.props;
+  }
+
+  // -- Layout --
+
   applyFilter(): void {
     if (this.bitset && !this.isDetached)
       this.dataFrame?.filter.and(this.bitset);
@@ -102,7 +173,7 @@ export class BioSubstructureFilter extends DG.Filter {
    */
   saveState(): any {
     const state = super.saveState();
-    state.bioSubstructure = this.bioFilter?.substructure;
+    state.props = this.bioFilter!.props.save();
     return state;
   }
 
@@ -111,105 +182,165 @@ export class BioSubstructureFilter extends DG.Filter {
    */
   applyState(state: any): void {
     super.applyState(state); //column, columnName
-    if (state.bioSubstructure)
-      this.bioFilter!.substructure = state.bioSubstructure;
+    if (state.props)
+      this.bioFilter!.props.apply(state.props);
+
+    // if (state.bioSubstructure) {
+    //   // (async () => { await this.bioFilterOnChangedDebounced(); })();
+    //   this.bioFilter!.substructure = state.bioSubstructure;
+    // }
+  }
 
-    const that = this;
-    if (state.bioSubstructure)
-      setTimeout(function() { that._onInputChanged(); }, 1000);
+  private fireFilterSync(): void {
+    const logPrefix = `${this.filterToLog()}.fireFilterSync()`;
+    _package.logger.debug(`${logPrefix}, ` +
+      `bioFilter = ${!!this.bioFilter ? this.bioFilter.constructor.name : 'null'}` +
+      (!!this.bioFilter ? `, props = ${JSON.stringify(this.bioFilter!.props.save())}` : ''));
+
+    grok.events.fireCustomEvent(FILTER_SYNC_EVENT, new FilterState(
+      this.bioFilter!.props, this.filterId, this.dataFrame!.id, this.columnName!, this.bitset));
   }
 
+  // -- Handle events
+
   /**
    * Performs the actual filtering
    * When the results are ready, triggers `rows.requestFilter`, which in turn triggers `applyFilter`
    * that would simply apply the bitset synchronously.
    */
-  async _onInputChanged(): Promise<void> {
-    _package.logger.debug('Bio: BioSubstructureFilter._onInputChanged(), start');
+  bioFilterOnChangedDebounced(): void {
+    if (!this.dataFrame) return; // Debounced event can be handled postponed
+    const logPrefix = `${this.filterToLog()}.bioFilterOnChangedDebounced()`;
+    _package.logger.debug(`${logPrefix}, start, ` +
+      `isFiltering = ${this.isFiltering}, ` +
+      `props = ${JSON.stringify(this.bioFilter!.props.save())}`);
+
     if (!this.isFiltering) {
       this.bitset = null;
-      this.dataFrame?.rows.requestFilter();
-    } else if (wu(this.dataFrame!.rows.filters).has(`${this.columnName}: ${this.filterSummary}`)) {
-      // some other filter is already filtering for the exact same thing
+      this.dataFrame!.rows.requestFilter();
+      return;
+    }
+
+    // some other filter is already filtering for the exact same thing
+    if (wu(this.dataFrame!.rows.filters).has(`${this.columnName}: ${this.filterSummary}`))
       return;
-    } else {
+
+    this.filterSyncer.sync(logPrefix, async () => {
       this.calculating = true;
       try {
+        _package.logger.debug(`${logPrefix}, before substructureSearch`);
         this.bitset = await this.bioFilter?.substructureSearch(this.column!)!;
+        _package.logger.debug(`${logPrefix}, after substructureSearch`);
         this.calculating = false;
+        this.fireFilterSync();
         this.dataFrame?.rows.requestFilter();
       } finally {
         this.calculating = false;
+        _package.logger.debug(`${logPrefix}, end`);
       }
-    }
+    });
   }
-}
 
-abstract class BioFilterBase {
-  onChanged: Subject<any> = new Subject<any>();
+  // -- IRenderer --
 
-  get filterPanel() {
-    return new HTMLElement();
-  }
+  private _onRendered = new Subject<void>();
 
-  abstract get substructure(): string;
-  abstract set substructure(s: string);
+  get onRendered(): Observable<void> { return this._onRendered; }
 
-  async substructureSearch(_column: DG.Column): Promise<DG.BitSet | null> {
-    return null;
+  invalidate(caller?: string): void {
+    const logPrefix = `${this.filterToLog()}.invalidate(${caller ? ` <- ${caller} ` : ''})`;
+    this.filterSyncer.sync(logPrefix, async () => { this._onRendered.next(); });
   }
 
-  abstract resetFilter(): void;
+  async awaitRendered(timeout: number = 10000): Promise<void> {
+    const callLog = `awaitRendered( ${timeout} )`;
+    const logPrefix = `${this.filterToLog()}.${callLog}`;
+    await delay(0);
+    await testEvent(this.onRendered, () => {
+      this.logger.debug(`${logPrefix}, ` + '_onRendered event caught');
+    }, () => {
+      this.invalidate(callLog);
+    }, timeout, `${logPrefix} ${timeout} timeout`);
 
-  abstract detach(): void;
+    // Rethrow stored syncer error (for test purposes)
+    const viewErrors = this.filterSyncer.resetErrors();
+    if (viewErrors.length > 0) throw viewErrors[0];
+  }
 }
 
-class FastaFilter extends BioFilterBase {
+export class FastaBioFilter extends BioFilterBase<BioFilterProps> {
+  readonly emptyProps = new BioFilterProps('');
+
   readonly substructureInput: DG.InputBase<string>;
 
+  get type(): string { return 'FastaBioFilter'; }
+
   constructor() {
     super();
 
     this.substructureInput = ui.stringInput('', '', () => {
-      this.onChanged.next();
+      this.props.substructure = this.substructureInput.value;
+      if (!this._propsChanging) this.onChanged.next();
     }, {placeholder: 'Substructure'});
   }
 
-  get filterPanel() {
-    return this.substructureInput.root;
+  public applyProps() {
+    this.substructureInput.value = this.props.substructure;
   }
 
-  get substructure() {
-    return this.substructureInput.value;
+  get filterPanel() {
+    return this.substructureInput.root;
   }
 
-  set substructure(s: string) {
-    this.substructureInput.value = s;
-  }
+  get isFiltering(): boolean { return this.substructureInput.value !== ''; }
 
   async substructureSearch(column: DG.Column): Promise<DG.BitSet | null> {
-    return linearSubstructureSearch(this.substructure, column);
+    return linearSubstructureSearch(this.props.substructure, column);
   }
 
-  resetFilter(): void {
-    this.substructureInput.value = '';
-  }
+  async attach(): Promise<void> {}
 
-  detach(): void { }
+  async detach(): Promise<void> {
+    await super.detach();
+  }
 }
 
-export class SeparatorFilter extends FastaFilter {
+export class SeparatorBioFilter extends BioFilterBase<SeparatorFilterProps> {
+  readonly emptyProps = new SeparatorFilterProps('');
+
+  readonly substructureInput: DG.InputBase<string>;
   readonly separatorInput: DG.InputBase<string>;
   colSeparator = '';
 
-  constructor(separator: string) {
+  get type(): string { return 'SeparatorBioFilter'; }
+
+  constructor(colSeparator: string) {
     super();
 
-    this.separatorInput = ui.stringInput('', '', () => {
-      this.onChanged.next();
+    this.substructureInput = ui.stringInput('', '', () => {
+      this.props.substructure = this.substructureInput.value;
+      if (!this._propsChanging) this.onChanged.next();
+    }, {placeholder: 'Substructure'});
+    this.separatorInput = ui.stringInput('', this.colSeparator = colSeparator, () => {
+      this.props.separator = !!this.separatorInput.value ? this.separatorInput.value : undefined;
+      if (!this._propsChanging) this.onChanged.next();
     }, {placeholder: 'Separator'});
-    this.colSeparator = separator;
-    this.separatorInput.value = separator;
+  }
+
+  applyProps(): void {
+    this.substructureInput.value = this.props.substructure;
+    this.separatorInput.value = this.props.separator ?? this.colSeparator;
+  }
+
+  get filterSummary(): string {
+    const sep: string = this.props.separator ? this.props.separator : this.colSeparator;
+    return `${this.props.substructure}, {sep}`;
+  };
+
+  get isFiltering(): boolean { return this.props.substructure !== ''; };
+
+  resetFilter(): void {
+    this.props = new SeparatorFilterProps('');
   }
 
   get filterPanel() {
@@ -233,100 +364,9 @@ export class SeparatorFilter extends FastaFilter {
     return linearSubstructureSearch(this.substructure, column, this.colSeparator);
   }
 
-  detach(): void { }
-}
-
-export class HelmFilter extends BioFilterBase {
-  helmEditor: IHelmWebEditor;
-  _filterPanel = ui.div('', {style: {cursor: 'pointer'}});
-  helmSubstructure = '';
-
-  constructor() {
-    super();
-    this.init();
-  }
-
-  viewSubs: Unsubscribable[] = [];
-
-  async init() {
-    this.helmEditor = await grok.functions.call('Helm:helmWebEditor');
-    await ui.tools.waitForElementInDom(this._filterPanel);
-    this.updateFilterPanel();
-    let editorDiv: HTMLDivElement | undefined;
-    let webEditor: any | undefined;
-    // TODO: Unsubscribe 'click' and 'sizeChanged'
-    this.viewSubs.push(fromEvent(this._filterPanel, 'click').subscribe(() => {
-      ({editorDiv, webEditor} = this.helmEditor.createWebEditor(this.helmSubstructure));
-      const dlg = ui.dialog({showHeader: false, showFooter: true})
-        .add(editorDiv)
-        .onOK(() => {
-          const helmString = webEditor.canvas.getHelm(true)
-            .replace(/<\/span>/g, '').replace(/<span style='background:#bbf;'>/g, '');
-          this.helmSubstructure = helmString;
-          this.updateFilterPanel(this.substructure);
-          setTimeout(() => { this.onChanged.next(); }, 10);
-        }).show({modal: true, fullScreen: true});
-      const onCloseSub = dlg.onClose.subscribe(() => {
-        onCloseSub.unsubscribe();
-        editorDiv = undefined;
-        webEditor = undefined;
-      });
-    }));
-    this.viewSubs.push(ui.onSizeChanged(this._filterPanel).subscribe((_) => {
-      try {
-        if (!!webEditor) {
-          const helmString = webEditor.canvas.getHelm(true)
-            .replace(/<\/span>/g, '').replace(/<span style='background:#bbf;'>/g, '');
-          this.updateFilterPanel(helmString);
-        }
-      } catch (err: any) {
-        const [errMsg, errStack] = errInfo(err);
-        _package.logger.error(errMsg, undefined, errStack);
-      }
-    }));
-  }
-
-  get filterPanel() {
-    return this._filterPanel;
-  }
-
-  get substructure() {
-    return this.helmSubstructure;
-  }
-
-  set substructure(s: string) {
-    this.helmEditor.editor.setHelm(s);
-  }
-
-  updateFilterPanel(helmString?: string) {
-    const width = this._filterPanel.parentElement!.clientWidth < 100 ? 100 :
-      this._filterPanel.parentElement!.clientWidth;
-    const height = width / 2;
-    if (!helmString) {
-      const editDiv = ui.divText('Click to edit', 'helm-substructure-filter');
-      updateDivInnerHTML(this._filterPanel, editDiv);
-    } else {
-      updateDivInnerHTML(this._filterPanel, this.helmEditor.host);
-      this.helmEditor.editor.setHelm(helmString);
-      this.helmEditor.resizeEditor(width, height);
-    }
-  }
-
-  async substructureSearch(column: DG.Column): Promise<DG.BitSet | null> {
-    ui.setUpdateIndicator(this._filterPanel, true);
-    await delay(10);
-    const res = await helmSubstructureSearch(this.substructure, column);
-    ui.setUpdateIndicator(this._filterPanel, false);
-    return res;
-  }
-
-  resetFilter(): void {
-    console.debug('Bio: HelmFilter.resetFilter()');
-    this.helmSubstructure = '';
-    this.updateFilterPanel(this.substructure);
-  }
+  async attach(): Promise<void> {}
 
-  detach(): void {
-    for (const sub of this.viewSubs) sub.unsubscribe();
+  async detach(): Promise<void> {
+    await super.detach();
   }
 }

package/src/widgets/composition-analysis-widget.ts

@@ -11,7 +11,7 @@ import '../../css/composition-analysis.css';
 import {UnitsHandler} from '@datagrok-libraries/bio/src/utils/units-handler';
 
 
-export function getCompositionAnalysisWidget(val: DG.SemanticValue) {
+export function getCompositionAnalysisWidget(val: DG.SemanticValue): DG.Widget {
   const host = ui.div();
   host.classList.add('macromolecule-cell-comp-analysis-host');
   const alphabet = val.cell.column.tags[bioTAGS.alphabet];

package/dist/100.js

@@ -1,2 +0,0 @@
-var bio;(()=>{"use strict";var r,e,t={7100:(r,e,t)=>{var o,a;(a=o||(o={})).EUCLIDEAN="EUCLIDEAN",a.MANHATTAN="MANHATTAN";const n=r=>null==r;var i=t(6361),s=t(9657);onmessage=r=>{const{values:e,fnName:t,startRow:o,startCol:a,chunckSize:c,opts:l}=r.data,p={};try{let r=o,u=a,f=0,v=0,h=Number.MIN_VALUE;if((0,i.sQ)(t))for(let r=0;r<e.length;++r)n(e[r])||(e[r]=new s.Z(e[r]._data,e[r]._length));const g=new Float32Array(c),b=new i.UH(t).getMeasure(l);for(;f<c;){const t=n(e[r])||n(e[u])?1:b(e[r],e[u]);g[f]=t,t<v&&(v=t),t>h&&(h=t),f++,u++,u===e.length&&(r++,u=r+1)}p.distanceMatrixData=g,p.min=v,p.max=h}catch(r){p.error=r}postMessage(p)}}},o={};function a(r){var e=o[r];if(void 0!==e)return e.exports;var n=o[r]={exports:{}};return t[r](n,n.exports,a),n.exports}a.m=t,a.x=()=>{var r=a.O(void 0,[649,361],(()=>a(7100)));return a.O(r)},r=[],a.O=(e,t,o,n)=>{if(!t){var i=1/0;for(p=0;p<r.length;p++){for(var[t,o,n]=r[p],s=!0,c=0;c<t.length;c++)(!1&n||i>=n)&&Object.keys(a.O).every((r=>a.O[r](t[c])))?t.splice(c--,1):(s=!1,n<i&&(i=n));if(s){r.splice(p--,1);var l=o();void 0!==l&&(e=l)}}return e}n=n||0;for(var p=r.length;p>0&&r[p-1][2]>n;p--)r[p]=r[p-1];r[p]=[t,o,n]},a.d=(r,e)=>{for(var t in e)a.o(e,t)&&!a.o(r,t)&&Object.defineProperty(r,t,{enumerable:!0,get:e[t]})},a.f={},a.e=r=>Promise.all(Object.keys(a.f).reduce(((e,t)=>(a.f[t](r,e),e)),[])),a.u=r=>r+".js",a.g=function(){if("object"==typeof globalThis)return globalThis;try{return this||new Function("return this")()}catch(r){if("object"==typeof window)return window}}(),a.o=(r,e)=>Object.prototype.hasOwnProperty.call(r,e),(()=>{var r;a.g.importScripts&&(r=a.g.location+"");var e=a.g.document;if(!r&&e&&(e.currentScript&&(r=e.currentScript.src),!r)){var t=e.getElementsByTagName("script");if(t.length)for(var o=t.length-1;o>-1&&!r;)r=t[o--].src}if(!r)throw new Error("Automatic publicPath is not supported in this browser");r=r.replace(/#.*$/,"").replace(/\?.*$/,"").replace(/\/[^\/]+$/,"/"),a.p=r})(),(()=>{var r={100:1};a.f.i=(e,t)=>{r[e]||importScripts(a.p+a.u(e))};var e=self.webpackChunkbio=self.webpackChunkbio||[],t=e.push.bind(e);e.push=e=>{var[o,n,i]=e;for(var s in n)a.o(n,s)&&(a.m[s]=n[s]);for(i&&i(a);o.length;)r[o.pop()]=1;t(e)}})(),e=a.x,a.x=()=>Promise.all([a.e(649),a.e(361)]).then(e);var n=a.x();bio=n})();
-//# sourceMappingURL=100.js.map

package/dist/100.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"100.js","mappings":"+BAAIA,ECAAC,E,kBCAG,IAAI,EACAC,KAGR,IAA+B,EAA6B,CAAC,IAFtB,UAAI,YAC1CA,EAAsC,UAAI,YCFvC,MAAMC,EAASC,GAAMA,Q,wBCE5BC,UAAaC,IACT,MAAM,OAAEC,EAAM,OAAEC,EAAM,SAAEC,EAAQ,SAAEC,EAAQ,WAAEC,EAAU,KAAEC,GAASN,EAAMO,KACjEA,EAAO,CAAC,EACd,IAGI,IAAIC,EAAIL,EACJM,EAAIL,EACJM,EAAM,EACNC,EAAO,EACPC,EAAOC,OAAOC,UAClB,IAAI,QAAiBZ,GACjB,IAAK,IAAIM,EAAI,EAAGA,EAAIP,EAAOc,SAAUP,EAC7BX,EAAMI,EAAOO,MAEjBP,EAAOO,GAAK,IAAI,IAASP,EAAOO,GAAGQ,MAAOf,EAAOO,GAAGS,UAG5D,MAAMC,EAAS,IAAIC,aAAad,GAC1Be,EAAa,IAAI,KAAQlB,GAAQmB,WAAWf,GAClD,KAAOI,EAAML,GAAY,CACrB,MAAMiB,EAASzB,EAAMI,EAAOO,KAAQX,EAAMI,EAAOQ,IACV,EAAnCW,EAAWnB,EAAOO,GAAIP,EAAOQ,IACjCS,EAAOR,GAAOY,EACVA,EAAQX,IACRA,EAAOW,GACPA,EAAQV,IACRA,EAAOU,GACXZ,IACAD,IACIA,IAAMR,EAAOc,SACbP,IACAC,EAAID,EAAI,EAEhB,CACAD,EAAKgB,mBAAqBL,EAC1BX,EAAKiB,IAAMb,EACXJ,EAAKkB,IAAMb,CACf,CACA,MAAOc,GACHnB,EAAKoB,MAAQD,CACjB,CACAE,YAAYrB,EAAK,C,GC5CjBsB,EAA2B,CAAC,EAGhC,SAASC,EAAoBC,GAE5B,IAAIC,EAAeH,EAAyBE,GAC5C,QAAqBE,IAAjBD,EACH,OAAOA,EAAaE,QAGrB,IAAIC,EAASN,EAAyBE,GAAY,CAGjDG,QAAS,CAAC,GAOX,OAHAE,EAAoBL,GAAUI,EAAQA,EAAOD,QAASJ,GAG/CK,EAAOD,OACf,CAGAJ,EAAoBO,EAAID,EAGxBN,EAAoBhC,EAAI,KAGvB,IAAIwC,EAAsBR,EAAoBS,OAAEN,EAAW,CAAC,IAAI,MAAM,IAAOH,EAAoB,QAEjG,OADsBA,EAAoBS,EAAED,EAClB,ELjCvB5C,EAAW,GACfoC,EAAoBS,EAAI,CAACC,EAAQC,EAAUC,EAAIC,KAC9C,IAAGF,EAAH,CAMA,IAAIG,EAAeC,IACnB,IAASrC,EAAI,EAAGA,EAAId,EAASqB,OAAQP,IAAK,CAGzC,IAFA,IAAKiC,EAAUC,EAAIC,GAAYjD,EAASc,GACpCsC,GAAY,EACPrC,EAAI,EAAGA,EAAIgC,EAAS1B,OAAQN,MACpB,EAAXkC,GAAsBC,GAAgBD,IAAaI,OAAOC,KAAKlB,EAAoBS,GAAGU,OAAOC,GAASpB,EAAoBS,EAAEW,GAAKT,EAAShC,MAC9IgC,EAASU,OAAO1C,IAAK,IAErBqC,GAAY,EACTH,EAAWC,IAAcA,EAAeD,IAG7C,GAAGG,EAAW,CACbpD,EAASyD,OAAO3C,IAAK,GACrB,IAAI4C,EAAIV,SACET,IAANmB,IAAiBZ,EAASY,EAC/B,CACD,CACA,OAAOZ,CAnBP,CAJCG,EAAWA,GAAY,EACvB,IAAI,IAAInC,EAAId,EAASqB,OAAQP,EAAI,GAAKd,EAASc,EAAI,GAAG,GAAKmC,EAAUnC,IAAKd,EAASc,GAAKd,EAASc,EAAI,GACrGd,EAASc,GAAK,CAACiC,EAAUC,EAAIC,EAqBjB,EMzBdb,EAAoBuB,EAAI,CAACnB,EAASoB,KACjC,IAAI,IAAIJ,KAAOI,EACXxB,EAAoByB,EAAED,EAAYJ,KAASpB,EAAoByB,EAAErB,EAASgB,IAC5EH,OAAOS,eAAetB,EAASgB,EAAK,CAAEO,YAAY,EAAMC,IAAKJ,EAAWJ,IAE1E,ECNDpB,EAAoB6B,EAAI,CAAC,EAGzB7B,EAAoBJ,EAAKkC,GACjBC,QAAQC,IAAIf,OAAOC,KAAKlB,EAAoB6B,GAAGI,QAAO,CAACC,EAAUd,KACvEpB,EAAoB6B,EAAET,GAAKU,EAASI,GAC7BA,IACL,KCNJlC,EAAoBmC,EAAKL,GAEZA,EAAU,MCHvB9B,EAAoBoC,EAAI,WACvB,GAA0B,iBAAfC,WAAyB,OAAOA,WAC3C,IACC,OAAOC,MAAQ,IAAIC,SAAS,cAAb,EAChB,CAAE,MAAO3C,GACR,GAAsB,iBAAX4C,OAAqB,OAAOA,MACxC,CACA,CAPuB,GCAxBxC,EAAoByB,EAAI,CAACgB,EAAKC,IAAUzB,OAAO0B,UAAUC,eAAeC,KAAKJ,EAAKC,G,MCAlF,IAAII,EACA9C,EAAoBoC,EAAEW,gBAAeD,EAAY9C,EAAoBoC,EAAEY,SAAW,IACtF,IAAIC,EAAWjD,EAAoBoC,EAAEa,SACrC,IAAKH,GAAaG,IACbA,EAASC,gBACZJ,EAAYG,EAASC,cAAcC,MAC/BL,GAAW,CACf,IAAIM,EAAUH,EAASI,qBAAqB,UAC5C,GAAGD,EAAQnE,OAEV,IADA,IAAIP,EAAI0E,EAAQnE,OAAS,EAClBP,GAAK,IAAMoE,GAAWA,EAAYM,EAAQ1E,KAAKyE,GAExD,CAID,IAAKL,EAAW,MAAM,IAAIQ,MAAM,yDAChCR,EAAYA,EAAUS,QAAQ,OAAQ,IAAIA,QAAQ,QAAS,IAAIA,QAAQ,YAAa,KACpFvD,EAAoBwD,EAAIV,C,WCdxB,IAAIW,EAAkB,CACrB,IAAK,GAgBNzD,EAAoB6B,EAAEnD,EAAI,CAACoD,EAASI,KAE/BuB,EAAgB3B,IAElBiB,cAAc/C,EAAoBwD,EAAIxD,EAAoBmC,EAAEL,GAE9D,EAGD,IAAI4B,EAAqBC,KAAsB,gBAAIA,KAAsB,iBAAK,GAC1EC,EAA6BF,EAAmBG,KAAKC,KAAKJ,GAC9DA,EAAmBG,KAvBCpF,IACnB,IAAKkC,EAAUoD,EAAaC,GAAWvF,EACvC,IAAI,IAAIwB,KAAY8D,EAChB/D,EAAoByB,EAAEsC,EAAa9D,KACrCD,EAAoBO,EAAEN,GAAY8D,EAAY9D,IAIhD,IADG+D,GAASA,EAAQhE,GACdW,EAAS1B,QACdwE,EAAgB9C,EAASsD,OAAS,EACnCL,EAA2BnF,EAAK,C,KXnB7BZ,EAAOmC,EAAoBhC,EAC/BgC,EAAoBhC,EAAI,IAChB+D,QAAQC,IAAI,CAClBhC,EAAoBJ,EAAE,KACtBI,EAAoBJ,EAAE,OACpBsE,KAAKrG,GYJT,IAAI2C,EAAsBR,EAAoBhC,I","sources":["webpack://bio/webpack/runtime/chunk loaded","webpack://bio/webpack/runtime/startup chunk dependencies","webpack://bio/./node_modules/@datagrok-libraries/ml/src/distance-matrix/types.js","webpack://bio/./node_modules/@datagrok-libraries/ml/src/distance-matrix/utils.js","webpack://bio/./node_modules/@datagrok-libraries/ml/src/distance-matrix/distance-matrix-worker.js","webpack://bio/webpack/bootstrap","webpack://bio/webpack/runtime/define property getters","webpack://bio/webpack/runtime/ensure chunk","webpack://bio/webpack/runtime/get javascript chunk filename","webpack://bio/webpack/runtime/global","webpack://bio/webpack/runtime/hasOwnProperty shorthand","webpack://bio/webpack/runtime/publicPath","webpack://bio/webpack/runtime/importScripts chunk loading","webpack://bio/webpack/startup"],"sourcesContent":["var deferred = [];\n__webpack_require__.O = (result, chunkIds, fn, priority) => {\n\tif(chunkIds) {\n\t\tpriority = priority || 0;\n\t\tfor(var i = deferred.length; i > 0 && deferred[i - 1][2] > priority; i--) deferred[i] = deferred[i - 1];\n\t\tdeferred[i] = [chunkIds, fn, priority];\n\t\treturn;\n\t}\n\tvar notFulfilled = Infinity;\n\tfor (var i = 0; i < deferred.length; i++) {\n\t\tvar [chunkIds, fn, priority] = deferred[i];\n\t\tvar fulfilled = true;\n\t\tfor (var j = 0; j < chunkIds.length; j++) {\n\t\t\tif ((priority & 1 === 0 || notFulfilled >= priority) && Object.keys(__webpack_require__.O).every((key) => (__webpack_require__.O[key](chunkIds[j])))) {\n\t\t\t\tchunkIds.splice(j--, 1);\n\t\t\t} else {\n\t\t\t\tfulfilled = false;\n\t\t\t\tif(priority < notFulfilled) notFulfilled = priority;\n\t\t\t}\n\t\t}\n\t\tif(fulfilled) {\n\t\t\tdeferred.splice(i--, 1)\n\t\t\tvar r = fn();\n\t\t\tif (r !== undefined) result = r;\n\t\t}\n\t}\n\treturn result;\n};","var next = __webpack_require__.x;\n__webpack_require__.x = () => {\n\treturn Promise.all([\n\t\t__webpack_require__.e(649),\n\t\t__webpack_require__.e(361)\n\t]).then(next);\n};","export var DistanceAggregationMethods;\n(function (DistanceAggregationMethods) {\n    DistanceAggregationMethods[\"EUCLIDEAN\"] = \"EUCLIDEAN\";\n    DistanceAggregationMethods[\"MANHATTAN\"] = \"MANHATTAN\";\n})(DistanceAggregationMethods || (DistanceAggregationMethods = {}));\n;\n//# sourceMappingURL=data:application/json;base64,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","import { DistanceAggregationMethods } from './types';\nexport const isNil = (x) => x === null || x === undefined;\nexport function insertSmaller(distancesAr, indexes, num, index) {\n    if (num > distancesAr[distancesAr.length - 1])\n        return;\n    const newPosition = distancesAr.findIndex((v) => num < v);\n    distancesAr.pop();\n    distancesAr.splice(newPosition, 0, num);\n    indexes.pop();\n    indexes.splice(newPosition, 0, index);\n}\nexport function insertLarger(distancesAr, indexes, num, index) {\n    if (num < distancesAr[distancesAr.length - 1])\n        return;\n    const newPosition = distancesAr.findIndex((v) => num > v);\n    distancesAr.pop();\n    distancesAr.splice(newPosition, 0, num);\n    indexes.pop();\n    indexes.splice(newPosition, 0, index);\n}\nexport function getAggregationFunction(aggregationMethod, weights) {\n    switch (aggregationMethod) {\n        case DistanceAggregationMethods.MANHATTAN:\n            return (vs) => vs.reduce((acc, val, idx) => acc + val * weights[idx], 0);\n        default:\n            return (vs) => {\n                // euclidean\n                const sum = vs.reduce((acc, val, idx) => acc + (val * weights[idx]) ** 2, 0);\n                return Math.sqrt(sum);\n            };\n    }\n}\n//# sourceMappingURL=data:application/json;base64,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","import { isNil } from './utils';\nimport { Measure, isBitArrayMetric } from '../typed-metrics';\nimport BitArray from '@datagrok-libraries/utils/src/bit-array';\nonmessage = (event) => {\n    const { values, fnName, startRow, startCol, chunckSize, opts } = event.data;\n    const data = {};\n    try {\n        // if (startRow != -1)\n        //   throw new Error('Error in distance matrix worker'); // TODO: remove this line\n        let i = startRow;\n        let j = startCol;\n        let cnt = 0;\n        let lmin = 0;\n        let lmax = Number.MIN_VALUE;\n        if (isBitArrayMetric(fnName)) {\n            for (let i = 0; i < values.length; ++i) {\n                if (isNil(values[i]))\n                    continue;\n                values[i] = new BitArray(values[i]._data, values[i]._length);\n            }\n        }\n        const retVal = new Float32Array(chunckSize);\n        const distanceFn = new Measure(fnName).getMeasure(opts);\n        while (cnt < chunckSize) {\n            const value = !isNil(values[i]) && !isNil(values[j]) ?\n                distanceFn(values[i], values[j]) : 1;\n            retVal[cnt] = value;\n            if (value < lmin)\n                lmin = value;\n            if (value > lmax)\n                lmax = value;\n            cnt++;\n            j++;\n            if (j === values.length) {\n                i++;\n                j = i + 1;\n            }\n        }\n        data.distanceMatrixData = retVal;\n        data.min = lmin;\n        data.max = lmax;\n    }\n    catch (e) {\n        data.error = e;\n    }\n    postMessage(data);\n};\n//# sourceMappingURL=data:application/json;base64,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","// The module cache\nvar __webpack_module_cache__ = {};\n\n// The require function\nfunction __webpack_require__(moduleId) {\n\t// Check if module is in cache\n\tvar cachedModule = __webpack_module_cache__[moduleId];\n\tif (cachedModule !== undefined) {\n\t\treturn cachedModule.exports;\n\t}\n\t// Create a new module (and put it into the cache)\n\tvar module = __webpack_module_cache__[moduleId] = {\n\t\t// no module.id needed\n\t\t// no module.loaded needed\n\t\texports: {}\n\t};\n\n\t// Execute the module function\n\t__webpack_modules__[moduleId](module, module.exports, __webpack_require__);\n\n\t// Return the exports of the module\n\treturn module.exports;\n}\n\n// expose the modules object (__webpack_modules__)\n__webpack_require__.m = __webpack_modules__;\n\n// the startup function\n__webpack_require__.x = () => {\n\t// Load entry module and return exports\n\t// This entry module depends on other loaded chunks and execution need to be delayed\n\tvar __webpack_exports__ = __webpack_require__.O(undefined, [649,361], () => (__webpack_require__(7100)))\n\t__webpack_exports__ = __webpack_require__.O(__webpack_exports__);\n\treturn __webpack_exports__;\n};\n\n","// define getter functions for harmony exports\n__webpack_require__.d = (exports, definition) => {\n\tfor(var key in definition) {\n\t\tif(__webpack_require__.o(definition, key) && !__webpack_require__.o(exports, key)) {\n\t\t\tObject.defineProperty(exports, key, { enumerable: true, get: definition[key] });\n\t\t}\n\t}\n};","__webpack_require__.f = {};\n// This file contains only the entry chunk.\n// The chunk loading function for additional chunks\n__webpack_require__.e = (chunkId) => {\n\treturn Promise.all(Object.keys(__webpack_require__.f).reduce((promises, key) => {\n\t\t__webpack_require__.f[key](chunkId, promises);\n\t\treturn promises;\n\t}, []));\n};","// This function allow to reference async chunks and sibling chunks for the entrypoint\n__webpack_require__.u = (chunkId) => {\n\t// return url for filenames based on template\n\treturn \"\" + chunkId + \".js\";\n};","__webpack_require__.g = (function() {\n\tif (typeof globalThis === 'object') return globalThis;\n\ttry {\n\t\treturn this || new Function('return this')();\n\t} catch (e) {\n\t\tif (typeof window === 'object') return window;\n\t}\n})();","__webpack_require__.o = (obj, prop) => (Object.prototype.hasOwnProperty.call(obj, prop))","var scriptUrl;\nif (__webpack_require__.g.importScripts) scriptUrl = __webpack_require__.g.location + \"\";\nvar document = __webpack_require__.g.document;\nif (!scriptUrl && document) {\n\tif (document.currentScript)\n\t\tscriptUrl = document.currentScript.src;\n\tif (!scriptUrl) {\n\t\tvar scripts = document.getElementsByTagName(\"script\");\n\t\tif(scripts.length) {\n\t\t\tvar i = scripts.length - 1;\n\t\t\twhile (i > -1 && !scriptUrl) scriptUrl = scripts[i--].src;\n\t\t}\n\t}\n}\n// When supporting browsers where an automatic publicPath is not supported you must specify an output.publicPath manually via configuration\n// or pass an empty string (\"\") and set the __webpack_public_path__ variable from your code to use your own logic.\nif (!scriptUrl) throw new Error(\"Automatic publicPath is not supported in this browser\");\nscriptUrl = scriptUrl.replace(/#.*$/, \"\").replace(/\\?.*$/, \"\").replace(/\\/[^\\/]+$/, \"/\");\n__webpack_require__.p = scriptUrl;","// no baseURI\n\n// object to store loaded chunks\n// \"1\" means \"already loaded\"\nvar installedChunks = {\n\t100: 1\n};\n\n// importScripts chunk loading\nvar installChunk = (data) => {\n\tvar [chunkIds, moreModules, runtime] = data;\n\tfor(var moduleId in moreModules) {\n\t\tif(__webpack_require__.o(moreModules, moduleId)) {\n\t\t\t__webpack_require__.m[moduleId] = moreModules[moduleId];\n\t\t}\n\t}\n\tif(runtime) runtime(__webpack_require__);\n\twhile(chunkIds.length)\n\t\tinstalledChunks[chunkIds.pop()] = 1;\n\tparentChunkLoadingFunction(data);\n};\n__webpack_require__.f.i = (chunkId, promises) => {\n\t// \"1\" is the signal for \"already loaded\"\n\tif(!installedChunks[chunkId]) {\n\t\tif(true) { // all chunks have JS\n\t\t\timportScripts(__webpack_require__.p + __webpack_require__.u(chunkId));\n\t\t}\n\t}\n};\n\nvar chunkLoadingGlobal = self[\"webpackChunkbio\"] = self[\"webpackChunkbio\"] || [];\nvar parentChunkLoadingFunction = chunkLoadingGlobal.push.bind(chunkLoadingGlobal);\nchunkLoadingGlobal.push = installChunk;\n\n// no HMR\n\n// no HMR manifest","// run startup\nvar __webpack_exports__ = __webpack_require__.x();\n"],"names":["deferred","next","DistanceAggregationMethods","isNil","x","onmessage","event","values","fnName","startRow","startCol","chunckSize","opts","data","i","j","cnt","lmin","lmax","Number","MIN_VALUE","length","_data","_length","retVal","Float32Array","distanceFn","getMeasure","value","distanceMatrixData","min","max","e","error","postMessage","__webpack_module_cache__","__webpack_require__","moduleId","cachedModule","undefined","exports","module","__webpack_modules__","m","__webpack_exports__","O","result","chunkIds","fn","priority","notFulfilled","Infinity","fulfilled","Object","keys","every","key","splice","r","d","definition","o","defineProperty","enumerable","get","f","chunkId","Promise","all","reduce","promises","u","g","globalThis","this","Function","window","obj","prop","prototype","hasOwnProperty","call","scriptUrl","importScripts","location","document","currentScript","src","scripts","getElementsByTagName","Error","replace","p","installedChunks","chunkLoadingGlobal","self","parentChunkLoadingFunction","push","bind","moreModules","runtime","pop","then"],"sourceRoot":""}

package/dist/118.js

@@ -1,2 +0,0 @@
-var bio;(()=>{"use strict";var e,r,t={7118:(e,r,t)=>{var o,n;(n=o||(o={})).EUCLIDEAN="EUCLIDEAN",n.MANHATTAN="MANHATTAN";const a=e=>null==e;var s=t(6361),i=t(9657);onmessage=async e=>{const{values:r,startIdx:t,endIdx:o,sampleLength:n,fnName:l,opts:c}=e.data;try{let e=new Float32Array(n);const p=o-t;if((0,s.sQ)(l))for(let e=0;e<r.length;++e)a(r[e])||(r[e]=new i.Z(r[e]._data,r[e]._length));let f=0;const h=Math.floor(p/n),u=new s.UH(l).getMeasure(c),g=r.length-2-Math.floor(Math.sqrt(-8*t+4*r.length*(r.length-1)-7)/2-.5),v=t-r.length*g+Math.floor((g+1)*(g+2)/2);let b=g,d=v,m=0;for(;f<p&&m<n;){const t=a(r[b])||a(r[d])?1:u(r[b],r[d]);for(e[m]=t,m++,f+=h,d+=h;d>=r.length&&f<p;)b++,d=b+1+(d-r.length)}m<n&&(e=e.slice(0,m)),postMessage({distance:e})}catch(e){postMessage({error:e})}}}},o={};function n(e){var r=o[e];if(void 0!==r)return r.exports;var a=o[e]={exports:{}};return t[e](a,a.exports,n),a.exports}n.m=t,n.x=()=>{var e=n.O(void 0,[649,361],(()=>n(7118)));return n.O(e)},e=[],n.O=(r,t,o,a)=>{if(!t){var s=1/0;for(p=0;p<e.length;p++){for(var[t,o,a]=e[p],i=!0,l=0;l<t.length;l++)(!1&a||s>=a)&&Object.keys(n.O).every((e=>n.O[e](t[l])))?t.splice(l--,1):(i=!1,a<s&&(s=a));if(i){e.splice(p--,1);var c=o();void 0!==c&&(r=c)}}return r}a=a||0;for(var p=e.length;p>0&&e[p-1][2]>a;p--)e[p]=e[p-1];e[p]=[t,o,a]},n.d=(e,r)=>{for(var t in r)n.o(r,t)&&!n.o(e,t)&&Object.defineProperty(e,t,{enumerable:!0,get:r[t]})},n.f={},n.e=e=>Promise.all(Object.keys(n.f).reduce(((r,t)=>(n.f[t](e,r),r)),[])),n.u=e=>e+".js",n.g=function(){if("object"==typeof globalThis)return globalThis;try{return this||new Function("return this")()}catch(e){if("object"==typeof window)return window}}(),n.o=(e,r)=>Object.prototype.hasOwnProperty.call(e,r),(()=>{var e;n.g.importScripts&&(e=n.g.location+"");var r=n.g.document;if(!e&&r&&(r.currentScript&&(e=r.currentScript.src),!e)){var t=r.getElementsByTagName("script");if(t.length)for(var o=t.length-1;o>-1&&!e;)e=t[o--].src}if(!e)throw new Error("Automatic publicPath is not supported in this browser");e=e.replace(/#.*$/,"").replace(/\?.*$/,"").replace(/\/[^\/]+$/,"/"),n.p=e})(),(()=>{var e={118:1};n.f.i=(r,t)=>{e[r]||importScripts(n.p+n.u(r))};var r=self.webpackChunkbio=self.webpackChunkbio||[],t=r.push.bind(r);r.push=r=>{var[o,a,s]=r;for(var i in a)n.o(a,i)&&(n.m[i]=a[i]);for(s&&s(n);o.length;)e[o.pop()]=1;t(r)}})(),r=n.x,n.x=()=>Promise.all([n.e(649),n.e(361)]).then(r);var a=n.x();bio=a})();
-//# sourceMappingURL=118.js.map