@datagrok/bio 2.1.10 → 2.1.11

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (7) hide show
  1. package/.eslintrc.json +1 -0
  2. package/detectors.js +5 -4
  3. package/dist/package-test.js +3 -2
  4. package/dist/package.js +3 -2
  5. package/package.json +1 -1
  6. package/src/package.ts +3 -1
  7. package/{test-Bio-62cc009524f3-e7a922ae.html → test-Bio-91c83d8913ff-bb573307.html} +106 -106
package/package.json CHANGED
@@ -5,7 +5,7 @@
5
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  "name": "Leonid Stolbov",
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  "email": "lstolbov@datagrok.ai"
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  },
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- "version": "2.1.10",
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+ "version": "2.1.11",
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  "description": "Bio is a [package](https://datagrok.ai/help/develop/develop#packages) for the [Datagrok](https://datagrok.ai) platform",
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  "repository": {
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  "type": "git",
package/src/package.ts CHANGED
@@ -97,6 +97,8 @@ export async function initBio() {
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  }
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  async function loadLibraries() {
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+ //TODO handle if files are in place
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+
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  let uploadedLibraries: string[] = Object.values(await grok.dapi.userDataStorage.get(STORAGE_NAME, true));
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  if (uploadedLibraries.length == 0 && monomerLib == null)
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  monomerLib = new MonomerLib({});
@@ -396,7 +398,7 @@ export async function toAtomicLevel(df: DG.DataFrame, macroMolecule: DG.Column):
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  return;
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  const monomersLibFile = await _package.files.readAsText(HELM_CORE_LIB_FILENAME);
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  const monomersLibObject: any[] = JSON.parse(monomersLibFile);
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- _toAtomicLevel(df, macroMolecule, monomersLibObject);
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+ await _toAtomicLevel(df, macroMolecule, monomersLibObject);
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  }
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  //top-menu: Bio | MSA...
package/{test-Bio-62cc009524f3-e7a922ae.html → test-Bio-91c83d8913ff-bb573307.html} RENAMED
@@ -1,4 +1,4 @@
1
- <html><head><meta charset="utf-8"/><title>Bio Test Report. Datagrok version datagrok/datagrok:latest SHA=62cc009524f3. Commit e7a922ae.</title><style type="text/css">html,
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+ <html><head><meta charset="utf-8"/><title>Bio Test Report. Datagrok version datagrok/datagrok:latest SHA=91c83d8913ff. Commit bb573307.</title><style type="text/css">html,
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  body {
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  font-family: Arial, Helvetica, sans-serif;
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  font-size: 1rem;
@@ -229,7 +229,7 @@ header {
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  font-size: 1rem;
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  padding: 0 0.5rem;
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  }
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- </style></head><body><div id="jesthtml-content"><header><h1 id="title">Bio Test Report. Datagrok version datagrok/datagrok:latest SHA=62cc009524f3. Commit e7a922ae.</h1></header><div id="metadata-container"><div id="timestamp">Started: 2022-11-22 08:51:16</div><div id="summary"><div id="suite-summary"><div class="summary-total">Suites (1)</div><div class="summary-passed">1 passed</div><div class="summary-failed summary-empty">0 failed</div><div class="summary-pending summary-empty">0 pending</div></div><div id="test-summary"><div class="summary-total">Tests (1)</div><div class="summary-passed">1 passed</div><div class="summary-failed summary-empty">0 failed</div><div class="summary-pending summary-empty">0 pending</div></div></div></div><div id="suite-1" class="suite-container"><div class="suite-info"><div class="suite-path">/home/runner/work/public/public/packages/Bio/src/__jest__/remote.test.ts</div><div class="suite-time warn">39.691s</div></div><div class="suite-tests"><div class="test-result passed"><div class="test-info"><div class="test-suitename"> </div><div class="test-title">TEST</div><div class="test-status">passed</div><div class="test-duration">27.533s</div></div></div></div><div class="suite-consolelog"><div class="suite-consolelog-header">Console Log</div><div class="suite-consolelog-item"><pre class="suite-consolelog-item-origin"> at Object.&lt;anonymous&gt; (/home/runner/work/public/public/packages/Bio/src/__jest__/test-node.ts:63:11)
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+ </style></head><body><div id="jesthtml-content"><header><h1 id="title">Bio Test Report. Datagrok version datagrok/datagrok:latest SHA=91c83d8913ff. Commit bb573307.</h1></header><div id="metadata-container"><div id="timestamp">Started: 2022-11-30 16:25:48</div><div id="summary"><div id="suite-summary"><div class="summary-total">Suites (1)</div><div class="summary-passed">1 passed</div><div class="summary-failed summary-empty">0 failed</div><div class="summary-pending summary-empty">0 pending</div></div><div id="test-summary"><div class="summary-total">Tests (1)</div><div class="summary-passed">1 passed</div><div class="summary-failed summary-empty">0 failed</div><div class="summary-pending summary-empty">0 pending</div></div></div></div><div id="suite-1" class="suite-container"><div class="suite-info"><div class="suite-path">/home/runner/work/public/public/packages/Bio/src/__jest__/remote.test.ts</div><div class="suite-time warn">49.92s</div></div><div class="suite-tests"><div class="test-result passed"><div class="test-info"><div class="test-suitename"> </div><div class="test-title">TEST</div><div class="test-status">passed</div><div class="test-duration">35.236s</div></div></div></div><div class="suite-consolelog"><div class="suite-consolelog-header">Console Log</div><div class="suite-consolelog-item"><pre class="suite-consolelog-item-origin"> at Object.&lt;anonymous&gt; (/home/runner/work/public/public/packages/Bio/src/__jest__/test-node.ts:63:11)
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  at Generator.next (&lt;anonymous&gt;)
234
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  at fulfilled (/home/runner/work/public/public/packages/Bio/src/__jest__/test-node.ts:28:58)
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  at processTicksAndRejections (internal/process/task_queues.js:97:5)</pre><pre class="suite-consolelog-item-message">Using web root: http://localhost:8080</pre></div><div class="suite-consolelog-item"><pre class="suite-consolelog-item-origin"> at /home/runner/work/public/public/packages/Bio/src/__jest__/remote.test.ts:40:11
@@ -243,116 +243,116 @@ header {
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  at Generator.next (&lt;anonymous&gt;)
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  at fulfilled (/home/runner/work/public/public/packages/Bio/src/__jest__/remote.test.ts:31:58)
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  at runMicrotasks (&lt;anonymous&gt;)
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- at processTicksAndRejections (internal/process/task_queues.js:97:5)</pre><pre class="suite-consolelog-item-message">Test result : Success : 0 : Bio.Palettes.testPaletteN : OK
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+ at processTicksAndRejections (internal/process/task_queues.js:97:5)</pre><pre class="suite-consolelog-item-message">Test result : Success : 1 : Bio.Palettes.testPaletteN : OK
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  Test result : Success : 1 : Bio.Palettes.testPaletteAA : OK
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  Test result : Success : 0 : Bio.Palettes.testPalettePtMe : OK
249
- Test result : Success : 97 : Bio.detectors.NegativeEmpty : OK
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- Test result : Success : 24 : Bio.detectors.Negative1 : OK
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- Test result : Success : 17 : Bio.detectors.Negative2 : OK
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- Test result : Success : 54 : Bio.detectors.Negative3 : OK
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- Test result : Success : 449 : Bio.detectors.NegativeSmiles : OK
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- Test result : Success : 48 : Bio.detectors.Dna1 : OK
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- Test result : Success : 34 : Bio.detectors.Rna1 : OK
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- Test result : Success : 23 : Bio.detectors.AA1 : OK
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- Test result : Success : 39 : Bio.detectors.MsaDna1 : OK
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- Test result : Success : 18 : Bio.detectors.MsaAA1 : OK
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- Test result : Success : 37 : Bio.detectors.SepDna : OK
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- Test result : Success : 21 : Bio.detectors.SepRna : OK
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- Test result : Success : 24 : Bio.detectors.SepPt : OK
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- Test result : Success : 26 : Bio.detectors.SepUn1 : OK
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- Test result : Success : 14 : Bio.detectors.SepUn2 : OK
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- Test result : Success : 16 : Bio.detectors.SepMsaN1 : OK
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- Test result : Success : 474 : Bio.detectors.SamplesFastaCsvPt : OK
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- Test result : Success : 23 : Bio.detectors.SamplesFastaCsvNegativeEntry : OK
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- Test result : Success : 6 : Bio.detectors.SamplesFastaCsvNegativeLength : OK
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- Test result : Success : 22 : Bio.detectors.SamplesFastaCsvNegativeUniProtKB : OK
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- Test result : Success : 275 : Bio.detectors.SamplesFastaFastaPt : OK
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- Test result : Success : 767 : Bio.detectors.samplesPeptidesComplexNegativeID : OK
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- Test result : Success : 19 : Bio.detectors.SamplesPeptidesComplexNegativeMeasured : OK
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- Test result : Success : 10 : Bio.detectors.SamplesPeptidesComplexNegativeValue : OK
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- Test result : Success : 186 : Bio.detectors.samplesMsaComplexUn : OK
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- Test result : Success : 6 : Bio.detectors.samplesMsaComplexNegativeActivity : OK
275
- Test result : Success : 129 : Bio.detectors.samplesIdCsvNegativeID : OK
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- Test result : Success : 112 : Bio.detectors.samplesSarSmallCsvNegativeSmiles : OK
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- Test result : Success : 126 : Bio.detectors.samplesHelmCsvHELM : OK
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- Test result : Success : 4 : Bio.detectors.samplesHelmCsvNegativeActivity : OK
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- Test result : Success : 105 : Bio.detectors.samplesTestHelmNegativeID : OK
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- Test result : Success : 5 : Bio.detectors.samplesTestHelmNegativeTestType : OK
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- Test result : Success : 5 : Bio.detectors.samplesTestHelmPositiveHelmString : OK
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- Test result : Success : 4 : Bio.detectors.samplesTestHelmNegativeValid : OK
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- Test result : Success : 5 : Bio.detectors.samplesTestHelmNegativeMolWeight : OK
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- Test result : Success : 4 : Bio.detectors.samplesTestHelmNegativeMolFormula : OK
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- Test result : Success : 5 : Bio.detectors.samplesTestHelmNegativeSmiles : OK
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- Test result : Success : 451 : Bio.detectors.samplesTestDemogNegativeAll : OK
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- Test result : Success : 241 : Bio.detectors.samplesTestSmiles2NegativeSmiles : OK
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- Test result : Success : 106 : Bio.detectors.samplesTestSmilesShortNegativeSmiles : OK
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- Test result : Success : 119 : Bio.detectors.samplesTestActivityCliffsNegativeSmiles : OK
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- Test result : Success : 118 : Bio.detectors.samplesFastaPtPosSequence : OK
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- Test result : Success : 114 : Bio.detectors.samplesTestCerealNegativeCerealName : OK
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- Test result : Success : 194 : Bio.detectors.samplesTestSpgi100NegativeStereoCategory : OK
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- Test result : Success : 8 : Bio.detectors.samplesTestSpgi100NegativeScaffoldNames : OK
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- Test result : Success : 5 : Bio.detectors.samplesTestSpgi100NegativePrimaryScaffoldName : OK
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- Test result : Success : 5 : Bio.detectors.samplesTestSpgi100NegativeSampleName : OK
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- Test result : Success : 108 : Bio.detectors.samplesTestUnichemSourcesNegativeSrcUrl : OK
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+ Test result : Success : 228 : Bio.detectors.NegativeEmpty : OK
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+ Test result : Success : 36 : Bio.detectors.Negative1 : OK
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+ Test result : Success : 33 : Bio.detectors.Negative2 : OK
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+ Test result : Success : 38 : Bio.detectors.Negative3 : OK
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+ Test result : Success : 586 : Bio.detectors.NegativeSmiles : OK
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+ Test result : Success : 56 : Bio.detectors.Dna1 : OK
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+ Test result : Success : 28 : Bio.detectors.Rna1 : OK
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+ Test result : Success : 42 : Bio.detectors.AA1 : OK
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+ Test result : Success : 35 : Bio.detectors.MsaDna1 : OK
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+ Test result : Success : 38 : Bio.detectors.MsaAA1 : OK
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+ Test result : Success : 27 : Bio.detectors.SepDna : OK
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+ Test result : Success : 25 : Bio.detectors.SepRna : OK
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+ Test result : Success : 38 : Bio.detectors.SepPt : OK
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+ Test result : Success : 18 : Bio.detectors.SepUn1 : OK
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+ Test result : Success : 17 : Bio.detectors.SepUn2 : OK
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+ Test result : Success : 18 : Bio.detectors.SepMsaN1 : OK
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+ Test result : Success : 674 : Bio.detectors.SamplesFastaCsvPt : OK
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+ Test result : Success : 24 : Bio.detectors.SamplesFastaCsvNegativeEntry : OK
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+ Test result : Success : 21 : Bio.detectors.SamplesFastaCsvNegativeLength : OK
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+ Test result : Success : 56 : Bio.detectors.SamplesFastaCsvNegativeUniProtKB : OK
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+ Test result : Success : 345 : Bio.detectors.SamplesFastaFastaPt : OK
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+ Test result : Success : 1174 : Bio.detectors.samplesPeptidesComplexNegativeID : OK
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+ Test result : Success : 7 : Bio.detectors.SamplesPeptidesComplexNegativeMeasured : OK
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+ Test result : Success : 22 : Bio.detectors.SamplesPeptidesComplexNegativeValue : OK
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+ Test result : Success : 360 : Bio.detectors.samplesMsaComplexUn : OK
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+ Test result : Success : 14 : Bio.detectors.samplesMsaComplexNegativeActivity : OK
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+ Test result : Success : 239 : Bio.detectors.samplesIdCsvNegativeID : OK
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+ Test result : Success : 248 : Bio.detectors.samplesSarSmallCsvNegativeSmiles : OK
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+ Test result : Success : 275 : Bio.detectors.samplesHelmCsvHELM : OK
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+ Test result : Success : 12 : Bio.detectors.samplesHelmCsvNegativeActivity : OK
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+ Test result : Success : 246 : Bio.detectors.samplesTestHelmNegativeID : OK
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+ Test result : Success : 16 : Bio.detectors.samplesTestHelmNegativeTestType : OK
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+ Test result : Success : 18 : Bio.detectors.samplesTestHelmPositiveHelmString : OK
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+ Test result : Success : 6 : Bio.detectors.samplesTestHelmNegativeValid : OK
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+ Test result : Success : 15 : Bio.detectors.samplesTestHelmNegativeMolWeight : OK
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+ Test result : Success : 6 : Bio.detectors.samplesTestHelmNegativeMolFormula : OK
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+ Test result : Success : 18 : Bio.detectors.samplesTestHelmNegativeSmiles : OK
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+ Test result : Success : 966 : Bio.detectors.samplesTestDemogNegativeAll : OK
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+ Test result : Success : 332 : Bio.detectors.samplesTestSmiles2NegativeSmiles : OK
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+ Test result : Success : 138 : Bio.detectors.samplesTestSmilesShortNegativeSmiles : OK
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+ Test result : Success : 166 : Bio.detectors.samplesTestActivityCliffsNegativeSmiles : OK
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+ Test result : Success : 144 : Bio.detectors.samplesFastaPtPosSequence : OK
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+ Test result : Success : 141 : Bio.detectors.samplesTestCerealNegativeCerealName : OK
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+ Test result : Success : 221 : Bio.detectors.samplesTestSpgi100NegativeStereoCategory : OK
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+ Test result : Success : 10 : Bio.detectors.samplesTestSpgi100NegativeScaffoldNames : OK
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+ Test result : Success : 6 : Bio.detectors.samplesTestSpgi100NegativePrimaryScaffoldName : OK
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+ Test result : Success : 6 : Bio.detectors.samplesTestSpgi100NegativeSampleName : OK
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+ Test result : Success : 196 : Bio.detectors.samplesTestUnichemSourcesNegativeSrcUrl : OK
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  Test result : Success : 5 : Bio.detectors.samplesTestUnichemSourcesNegativeBaseIdUrl : OK
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- Test result : Success : 125 : Bio.detectors.samplesTestDmvOfficesNegativeOfficeName : OK
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- Test result : Success : 8 : Bio.detectors.samplesTestDmvOfficesNegativeCity : OK
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- Test result : Success : 130 : Bio.detectors.samplesTestAlertCollectionNegativeSmarts : OK
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- Test result : Success : 101 : Bio.detectors.samplesTestSpgiNegativeVals : OK
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- Test result : Success : 4 : Bio.detectorsBenchmark.separatorDnaShorts50Few50 : OK
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- Test result : Success : 8313 : Bio.detectorsBenchmark.separatorDnaShorts50Many1E6 : OK
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- Test result : Success : 985 : Bio.MSA.isCorrect : OK
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- Test result : Success : 102 : Bio.MSA.isCorrectLong : OK
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- Test result : Success : 934 : Bio.sequenceSpace.sequenceSpaceOpens : OK
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- Test result : Success : 441 : Bio.sequenceSpace.sequenceSpaceWithEmptyRows : OK
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- Test result : Success : 682 : Bio.activityCliffs.activityCliffsOpens : OK
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- Test result : Success : 763 : Bio.activityCliffs.activityCliffsWithEmptyRows : OK
298
+ Test result : Success : 183 : Bio.detectors.samplesTestDmvOfficesNegativeOfficeName : OK
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+ Test result : Success : 16 : Bio.detectors.samplesTestDmvOfficesNegativeCity : OK
300
+ Test result : Success : 166 : Bio.detectors.samplesTestAlertCollectionNegativeSmarts : OK
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+ Test result : Success : 249 : Bio.detectors.samplesTestSpgiNegativeVals : OK
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+ Test result : Success : 13 : Bio.detectorsBenchmark.separatorDnaShorts50Few50 : OK
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+ Test result : Success : 10007 : Bio.detectorsBenchmark.separatorDnaShorts50Many1E6 : OK
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+ Test result : Success : 1882 : Bio.MSA.isCorrect : OK
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+ Test result : Success : 152 : Bio.MSA.isCorrectLong : OK
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+ Test result : Success : 1316 : Bio.sequenceSpace.sequenceSpaceOpens : OK
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+ Test result : Success : 600 : Bio.sequenceSpace.sequenceSpaceWithEmptyRows : OK
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+ Test result : Success : 921 : Bio.activityCliffs.activityCliffsOpens : OK
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+ Test result : Success : 1014 : Bio.activityCliffs.activityCliffsWithEmptyRows : OK
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  Test result : Success : 1 : Bio.splitters.fastaMulti : OK
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  Test result : Success : 1 : Bio.splitters.helm1 : OK
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- Test result : Success : 0 : Bio.splitters.helm2 : OK
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- Test result : Success : 1 : Bio.splitters.helm3-multichar : OK
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+ Test result : Success : 1 : Bio.splitters.helm2 : OK
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+ Test result : Success : 0 : Bio.splitters.helm3-multichar : OK
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  Test result : Success : 0 : Bio.splitters.testHelm1 : OK
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  Test result : Success : 0 : Bio.splitters.testHelm2 : OK
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- Test result : Success : 0 : Bio.splitters.testHelm3 : OK
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- Test result : Success : 259 : Bio.splitters.splitToMonomers : OK
316
+ Test result : Success : 1 : Bio.splitters.testHelm3 : OK
317
+ Test result : Success : 393 : Bio.splitters.splitToMonomers : OK
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  Test result : Success : 2 : Bio.splitters.getHelmMonomers : OK
319
- Test result : Success : 63 : Bio.renderers.long sequence performance : OK
320
- Test result : Success : 800 : Bio.renderers.many sequence performance : OK
321
- Test result : Success : 278 : Bio.renderers.rendererMacromoleculeFasta : OK
322
- Test result : Success : 196 : Bio.renderers.rendererMacromoleculeSeparator : OK
323
- Test result : Success : 67 : Bio.renderers.rendererMacromoleculeDifference : OK
324
- Test result : Success : 364 : Bio.renderers.afterMsa : OK
325
- Test result : Success : 262 : Bio.renderers.afterConvert : OK
326
- Test result : Success : 170 : Bio.renderers.selectRendererBySemType : OK
327
- Test result : Success : 5 : Bio.converters.testFastaPtToSeparator : OK
328
- Test result : Success : 10 : Bio.converters.testFastaDnaToSeparator : OK
329
- Test result : Success : 3 : Bio.converters.testFastaRnaToSeparator : OK
330
- Test result : Success : 3 : Bio.converters.testFastaGapsToSeparator : OK
331
- Test result : Success : 2 : Bio.converters.testFastaPtToHelm : OK
332
- Test result : Success : 2 : Bio.converters.testFastaDnaToHelm : OK
333
- Test result : Success : 2 : Bio.converters.testFastaRnaToHelm : OK
334
- Test result : Success : 2 : Bio.converters.testFastaGapsToHelm : OK
319
+ Test result : Success : 90 : Bio.renderers.long sequence performance : OK
320
+ Test result : Success : 665 : Bio.renderers.many sequence performance : OK
321
+ Test result : Success : 397 : Bio.renderers.rendererMacromoleculeFasta : OK
322
+ Test result : Success : 269 : Bio.renderers.rendererMacromoleculeSeparator : OK
323
+ Test result : Success : 100 : Bio.renderers.rendererMacromoleculeDifference : OK
324
+ Test result : Success : 560 : Bio.renderers.afterMsa : OK
325
+ Test result : Success : 395 : Bio.renderers.afterConvert : OK
326
+ Test result : Success : 223 : Bio.renderers.selectRendererBySemType : OK
327
+ Test result : Success : 7 : Bio.converters.testFastaPtToSeparator : OK
328
+ Test result : Success : 6 : Bio.converters.testFastaDnaToSeparator : OK
329
+ Test result : Success : 6 : Bio.converters.testFastaRnaToSeparator : OK
330
+ Test result : Success : 7 : Bio.converters.testFastaGapsToSeparator : OK
331
+ Test result : Success : 4 : Bio.converters.testFastaPtToHelm : OK
332
+ Test result : Success : 3 : Bio.converters.testFastaDnaToHelm : OK
333
+ Test result : Success : 3 : Bio.converters.testFastaRnaToHelm : OK
334
+ Test result : Success : 3 : Bio.converters.testFastaGapsToHelm : OK
335
335
  Test result : Success : 1 : Bio.converters.testSeparatorPtToFasta : OK
336
- Test result : Success : 0 : Bio.converters.testSeparatorDnaToFasta : OK
336
+ Test result : Success : 1 : Bio.converters.testSeparatorDnaToFasta : OK
337
337
  Test result : Success : 1 : Bio.converters.testSeparatorRnaToFasta : OK
338
- Test result : Success : 0 : Bio.converters.testSeparatorGapsToFasta : OK
339
- Test result : Success : 0 : Bio.converters.testSeparatorPtToHelm : OK
338
+ Test result : Success : 1 : Bio.converters.testSeparatorGapsToFasta : OK
339
+ Test result : Success : 1 : Bio.converters.testSeparatorPtToHelm : OK
340
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  Test result : Success : 0 : Bio.converters.testSeparatorDnaToHelm : OK
341
- Test result : Success : 0 : Bio.converters.testSeparatorRnaToHelm : OK
341
+ Test result : Success : 1 : Bio.converters.testSeparatorRnaToHelm : OK
342
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  Test result : Success : 0 : Bio.converters.testSeparatorGapsToHelm : OK
343
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  Test result : Success : 1 : Bio.converters.testHelmDnaToFasta : OK
344
- Test result : Success : 0 : Bio.converters.testHelmRnaToFasta : OK
344
+ Test result : Success : 1 : Bio.converters.testHelmRnaToFasta : OK
345
345
  Test result : Success : 1 : Bio.converters.testHelmPtToFasta : OK
346
- Test result : Success : 0 : Bio.converters.testHelmDnaToSeparator : OK
347
- Test result : Success : 0 : Bio.converters.testHelmRnaToSeparator : OK
348
- Test result : Success : 0 : Bio.converters.testHelmPtToSeparator : OK
349
- Test result : Success : 2 : Bio.converters.testHelmLoneRibose : OK
350
- Test result : Success : 2 : Bio.converters.testHelmLoneDeoxyribose : OK
351
- Test result : Success : 2 : Bio.converters.testHelmLonePhosphorus : OK
346
+ Test result : Success : 1 : Bio.converters.testHelmDnaToSeparator : OK
347
+ Test result : Success : 1 : Bio.converters.testHelmRnaToSeparator : OK
348
+ Test result : Success : 1 : Bio.converters.testHelmPtToSeparator : OK
349
+ Test result : Success : 4 : Bio.converters.testHelmLoneRibose : OK
350
+ Test result : Success : 3 : Bio.converters.testHelmLoneDeoxyribose : OK
351
+ Test result : Success : 3 : Bio.converters.testHelmLonePhosphorus : OK
352
352
  Test result : Success : 1 : Bio.fastaFileHandler.testNormalFormatting : OK
353
353
  Test result : Success : 0 : Bio.fastaFileHandler.testExtraSpaces : OK
354
354
  Test result : Success : 0 : Bio.fastaFileHandler.testExtraNewlines : OK
355
- Test result : Success : 0 : Bio.fastaExport.wrapSequenceSingle : OK
355
+ Test result : Success : 1 : Bio.fastaExport.wrapSequenceSingle : OK
356
356
  Test result : Success : 0 : Bio.fastaExport.wrapSequenceMulti : OK
357
357
  Test result : Success : 2 : Bio.fastaExport.saveAsFastaTest1 : OK
358
358
  Test result : Success : 1 : Bio.fastaExport.saveAsFastaTest2 : OK
@@ -361,24 +361,24 @@ Test result : Success : 1 : Bio.bio.testGetStatsN1 : OK
361
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  Test result : Success : 0 : Bio.bio.testGetAlphabetSimilarity : OK
362
362
  Test result : Success : 1 : Bio.bio.testPickupPaletteN1 : OK
363
363
  Test result : Success : 1 : Bio.bio.testPickupPaletteN1e : OK
364
- Test result : Success : 1 : Bio.bio.testPickupPaletteAA1 : OK
364
+ Test result : Success : 2 : Bio.bio.testPickupPaletteAA1 : OK
365
365
  Test result : Success : 1 : Bio.bio.testPickupPaletteX : OK
366
366
  Test result : Success : 0 : Bio.WebLogo.monomerToShort.longMonomerSingle : OK
367
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  Test result : Success : 0 : Bio.WebLogo.monomerToShort.longMonomerShort : OK
368
- Test result : Success : 1 : Bio.WebLogo.monomerToShort.longMonomerLong56 : OK
368
+ Test result : Success : 0 : Bio.WebLogo.monomerToShort.longMonomerLong56 : OK
369
369
  Test result : Success : 0 : Bio.WebLogo.monomerToShort.longMonomerComplexFirstPartShort : OK
370
370
  Test result : Success : 0 : Bio.WebLogo.monomerToShort.longMonomerComplexFirstPartLong56 : OK
371
- Test result : Success : 97 : Bio.WebLogo-positions.allPositions : OK
372
- Test result : Success : 85 : Bio.WebLogo-positions.positions with shrinkEmptyTail option true (filterd) : OK
373
- Test result : Success : 78 : Bio.WebLogo-positions.positions with skipEmptyPositions option : OK
374
- Test result : Success : 3 : Bio.checkInputColumn.testMsaPos : OK
375
- Test result : Success : 1 : Bio.checkInputColumn.testMsaNegHelm : OK
371
+ Test result : Success : 154 : Bio.WebLogo-positions.allPositions : OK
372
+ Test result : Success : 123 : Bio.WebLogo-positions.positions with shrinkEmptyTail option true (filterd) : OK
373
+ Test result : Success : 127 : Bio.WebLogo-positions.positions with skipEmptyPositions option : OK
374
+ Test result : Success : 4 : Bio.checkInputColumn.testMsaPos : OK
375
+ Test result : Success : 2 : Bio.checkInputColumn.testMsaNegHelm : OK
376
376
  Test result : Success : 1 : Bio.checkInputColumn.testMsaNegUN : OK
377
377
  Test result : Success : 0 : Bio.checkInputColumn.testGetActionFunctionMeta : OK
378
- Test result : Success : 378 : Bio.similarity/diversity.similaritySearchViewer : OK
379
- Test result : Success : 239 : Bio.similarity/diversity.diversitySearchViewer : OK
380
- Test result : Success : 211 : Bio.substructureFilters.fasta : OK
381
- Test result : Success : 399 : Bio.substructureFilters.separator : OK
378
+ Test result : Success : 476 : Bio.similarity/diversity.similaritySearchViewer : OK
379
+ Test result : Success : 350 : Bio.similarity/diversity.diversitySearchViewer : OK
380
+ Test result : Success : 257 : Bio.substructureFilters.fasta : OK
381
+ Test result : Success : 434 : Bio.substructureFilters.separator : OK
382
382
  </pre></div><div class="suite-consolelog-item"><pre class="suite-consolelog-item-origin"> at /home/runner/work/public/public/packages/Bio/src/__jest__/remote.test.ts:74:11
383
383
  at Generator.next (&lt;anonymous&gt;)
384
384
  at fulfilled (/home/runner/work/public/public/packages/Bio/src/__jest__/remote.test.ts:31:58)