@datagrok/bio 1.7.15 → 1.7.16

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
package/package.json CHANGED
@@ -2,7 +2,7 @@
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  "name": "@datagrok/bio",
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  "beta": false,
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  "friendlyName": "Bio",
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- "version": "1.7.15",
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+ "version": "1.7.16",
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  "description": "Bio is a [package](https://datagrok.ai/help/develop/develop#packages) for the [Datagrok](https://datagrok.ai) platform",
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  "repository": {
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  "type": "git",
@@ -15,7 +15,7 @@
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  "@datagrok-libraries/ml": "^3.0.0",
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  "@datagrok-libraries/utils": "^1.4.0",
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  "cash-dom": "latest",
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- "datagrok-api": "^1.5.1",
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+ "datagrok-api": "^1.5.0",
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  "dayjs": "^1.11.4",
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  "openchemlib": "6.0.1",
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  "rxjs": "^6.5.5",
@@ -0,0 +1,15 @@
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+ set package_dir=%cd%
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+
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+ set dirs=^
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+ \..\..\js-api\ ^
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+ \..\..\libraries\utils\ ^
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+ \..\..\libraries\ml\ ^
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+ \..\..\libraries\bio\ ^
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+ \
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+
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+ call npm uninstall -g datagrok-api @datagrok-libraries/utils @datagrok-libraries/ml @datagrok-libraries/bio
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+
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+ for %%p in (%dirs%) do cd %package_dir%\%%p & rmdir /s /q node_modules
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+ for %%p in (%dirs%) do cd %package_dir%\%%p & rmdir /s /q dist
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+
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+ rem for %%p in (%dirs%) do cd %package_dir%\%%p & del "package-lock.json"
package/setup.cmd CHANGED
@@ -1,19 +1,15 @@
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- cd ../../js-api
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- call npm install
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- call npm link
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- cd ../libraries/utils
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- call npm install
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- call npm link
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- call npm link datagrok-api
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- cd ../libraries/ml
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- call npm install
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- call npm link
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- call npm link @datagrok-libraries/utils
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- cd ../libraries/bio
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- call npm install
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- call npm link
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- call npm link @datagrok-libraries/utils
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- cd ../../packages/Bio
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- call npm install
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- call npm link datagrok-api @datagrok-libraries/bio @datagrok-libraries/utils @datagrok-libraries/ml
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- webpack
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+ call setup-unlink-clean.cmd
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+
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+ set package_dir=%cd%
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+
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+ set dirs=^
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+ \..\..\js-api\ ^
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+ \..\..\libraries\utils\ ^
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+ \..\..\libraries\ml\ ^
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+ \..\..\libraries\bio\ ^
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+ \
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+
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+ for %%p in (%dirs%) do cd %package_dir%\%%p & call npm install
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+ for %%p in (%dirs%) do cd %package_dir%\%%p & call npm link
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+ for %%p in (%dirs%) do cd %package_dir%\%%p & call npm run link-all
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+ for %%p in (%dirs%) do cd %package_dir%\%%p & call npm run build
@@ -1,4 +1,4 @@
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- <html><head><meta charset="utf-8"/><title>Bio Test Report. Datagrok version datagrok/datagrok:latest SHA=34f75e5127b8. Commit 94ebd4cf.</title><style type="text/css">html,
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+ <html><head><meta charset="utf-8"/><title>Bio Test Report. Datagrok version datagrok/datagrok:latest SHA=4f0c8bae6479. Commit dda97945.</title><style type="text/css">html,
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  body {
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  font-family: Arial, Helvetica, sans-serif;
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  font-size: 1rem;
@@ -229,7 +229,7 @@ header {
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  font-size: 1rem;
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  padding: 0 0.5rem;
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  }
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- </style></head><body><div id="jesthtml-content"><header><h1 id="title">Bio Test Report. Datagrok version datagrok/datagrok:latest SHA=34f75e5127b8. Commit 94ebd4cf.</h1></header><div id="metadata-container"><div id="timestamp">Started: 2022-07-27 15:35:28</div><div id="summary"><div id="suite-summary"><div class="summary-total">Suites (1)</div><div class="summary-passed summary-empty">0 passed</div><div class="summary-failed">1 failed</div><div class="summary-pending summary-empty">0 pending</div></div><div id="test-summary"><div class="summary-total">Tests (1)</div><div class="summary-passed summary-empty">0 passed</div><div class="summary-failed">1 failed</div><div class="summary-pending summary-empty">0 pending</div></div></div></div><div id="suite-1" class="suite-container"><div class="suite-info"><div class="suite-path">/home/runner/work/public/public/packages/Bio/src/__jest__/remote.test.ts</div><div class="suite-time warn">214.6s</div></div><div class="suite-tests"><div class="test-result failed"><div class="test-info"><div class="test-suitename"> </div><div class="test-title">TEST</div><div class="test-status">failed</div><div class="test-duration">202.038s</div></div><div class="failureMessages"> <pre class="failureMsg">Error: Test result : Bio.MSA.is_correct : TypeError: Cannot read properties of undefined (reading 'split')
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+ </style></head><body><div id="jesthtml-content"><header><h1 id="title">Bio Test Report. Datagrok version datagrok/datagrok:latest SHA=4f0c8bae6479. Commit dda97945.</h1></header><div id="metadata-container"><div id="timestamp">Started: 2022-07-28 11:23:15</div><div id="summary"><div id="suite-summary"><div class="summary-total">Suites (1)</div><div class="summary-passed summary-empty">0 passed</div><div class="summary-failed">1 failed</div><div class="summary-pending summary-empty">0 pending</div></div><div id="test-summary"><div class="summary-total">Tests (1)</div><div class="summary-passed summary-empty">0 passed</div><div class="summary-failed">1 failed</div><div class="summary-pending summary-empty">0 pending</div></div></div></div><div id="suite-1" class="suite-container"><div class="suite-info"><div class="suite-path">/home/runner/work/public/public/packages/Bio/src/__jest__/remote.test.ts</div><div class="suite-time warn">220.921s</div></div><div class="suite-tests"><div class="test-result failed"><div class="test-info"><div class="test-suitename"> </div><div class="test-title">TEST</div><div class="test-status">failed</div><div class="test-duration">200.288s</div></div><div class="failureMessages"> <pre class="failureMsg">Error: Test result : Bio.MSA.is_correct : TypeError: Cannot read properties of undefined (reading 'split')
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  Test result : Bio.activityCliffs.activityCliffsOpen : Error: Expected "105 cliffs", got "2362 cliffs"
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  at /home/runner/work/public/public/packages/Bio/src/__jest__/remote.test.ts:67:20