@datagrok/bio 1.5.9 → 1.7.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/detectors.js +17 -5
- package/dist/package-test.js +616 -496
- package/dist/package.js +404 -473
- package/files/samples/sample_FASTA.csv +0 -1
- package/files/samples/sample_FASTA.fasta +0 -3
- package/files/samples/sample_FASTA_DNA.csv +101 -0
- package/files/samples/sample_FASTA_PT.csv +101 -0
- package/files/samples/sample_FASTA_RNA.csv +101 -0
- package/files/samples/testSmiles2.csv +12248 -0
- package/package.json +2 -2
- package/scripts/generate_fasta_csv_for_alphabets.R +70 -0
- package/src/package-test.ts +1 -0
- package/src/package.ts +105 -20
- package/src/tests/convert-test.ts +8 -8
- package/src/tests/detectors-test.ts +15 -3
- package/src/tests/renderer-test.ts +40 -18
- package/src/utils/cell-renderer.ts +47 -75
- package/src/utils/convert.ts +10 -14
- package/src/utils/multiple-sequence-alignment.ts +4 -2
- package/src/utils/notation-converter.ts +215 -55
- package/{test-Bio-34f75e5127b8-b47d4664.html → test-Bio-34f75e5127b8-7af21e5d.html} +17 -21
- package/src/utils/chem-palette.ts +0 -280
- package/src/utils/misc.ts +0 -29
|
@@ -63,4 +63,3 @@ UPI0001614A89,37,A0A0A8VBX4; A0A0H3NXY0; A0A0G2N6K7.1 (obsolete); A0A0M1V224.1 (
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63
63
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UPI000169E485,35,A0A153KQI0.1 (obsolete); A0A1J0NK41.1 (obsolete); A0A1V2DF85.1 (obsolete); K7QCB5.1 (obsolete),MHERFLRENRRSPSRVGGAIDAMPAGCGGMVVIGM,-1.5044359483896845
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64
64
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UPI000169FCE1,39,A0A656IDX3; A0A6C7A0R4; C0Q053; E8XEF8; G5LRF0; G5NFQ1; M7RCS7; A0A021WPB8.1 (obsolete); A0A068IN21.1 (obsolete); A0A068PK03.1 (obsolete); A0A077YJZ3.1 (obsolete); A0A078P440.1 (obsolete); A0A078PGS7.1 (obsolete); A0A080YVC6.1 (obsolete); A0A098GTT7.1 (obsolete); A0A0A8SUG6.1 (obsolete); A0A0B7QMT4.1 (obsolete); A0A0B7QXI3.1 (obsolete); A0A0B7QYQ1.1 (obsolete); A0A0B7RM41.1 (obsolete); A0A0B7RSH2.1 (obsolete); A0A0B7RYE2.1 (obsolete); A0A0B7SSM9.1 (obsolete); A0A0B7STM0.1 (obsolete); A0A0B7T296.1 (obsolete); A0A0B7TX24.1 (obsolete); A0A0B7U1H7.1 (obsolete); A0A0B7U264.1 (obsolete); A0A0B7UC41.1 (obsolete); A0A0B7UME8.1 (obsolete); A0A0B7V6B1.1 (obsolete); A0A0B7VLT0.1 (obsolete); A0A0B7VRU2.1 (obsolete); A0A0B7W472.1 (obsolete); A0A0B7W5J9.1 (obsolete); A0A0B7WUQ0.1 (obsolete); A0A0B8K7B9.1 (obsolete); A0A0C5TXP2.1 (obsolete); A0A0E1Q441.1 (obsolete); A0A0E2MH47.1 (obsolete); A0A0F6DRT0.1 (obsolete); A0A0G2LKZ8.1 (obsolete); A0A0G2NQ03.1 (obsolete); A0A0H3RKU6.1 (obsolete); A0A0N2BI82.1 (obsolete); A0A0N2BNW2.1 (obsolete); A0A0S2WD32.1 (obsolete); A0A1M3ZBY0.1 (obsolete); A0A1M3ZIA1.1 (obsolete); A0A1M4A4L9.1 (obsolete); A0A1M4A739.1 (obsolete); A0A1W2L8M5.1 (obsolete); A0A221AY29.1 (obsolete); A0A486X7G3.1 (obsolete); A0A518UNK4.1 (obsolete); A0A5E4DW86.1 (obsolete); B5C6Q5.1 (obsolete); B5FPF5.1 (obsolete); B5MIR4.1 (obsolete); B5N1F1.1 (obsolete); E7V3X0.1 (obsolete); E8NPX9.1 (obsolete); F2FBP0.1 (obsolete); F2FSL8.1 (obsolete); G5MZY4.1 (obsolete); G7T2W4.1 (obsolete); J1I084.1 (obsolete); J1IMV6.1 (obsolete); J1J8I1.1 (obsolete); J1KGX6.1 (obsolete); J1L3A6.1 (obsolete); J1L833.1 (obsolete); J1LPB8.1 (obsolete); J1NKU7.1 (obsolete); J1PPY6.1 (obsolete); J1S5B6.1 (obsolete); J1VRL7.1 (obsolete); J1WIA4.1 (obsolete); J1WZQ3.1 (obsolete); J2AWK9.1 (obsolete); J2B6K2.1 (obsolete); J2DH55.1 (obsolete); J2DI78.1 (obsolete); J2ENS4.1 (obsolete); J2FR89.1 (obsolete); J2HHJ4.1 (obsolete); J2I9P0.1 (obsolete); K8S348.1 (obsolete); K8S5C1.1 (obsolete); K8S896.1 (obsolete); K8T7U3.1 (obsolete); K8TAY6.1 (obsolete); K8TJL1.1 (obsolete); K8UBJ3.1 (obsolete); K8ULX9.1 (obsolete); K8V3L9.1 (obsolete); K8VAJ8.1 (obsolete); K8VPG1.1 (obsolete); L5W4S4.1 (obsolete); L5WC19.1 (obsolete); L5WHP1.1 (obsolete); L5WP78.1 (obsolete); L5X276.1 (obsolete); L5XDS4.1 (obsolete); L5YA20.1 (obsolete); L5YPV3.1 (obsolete); L5YVT4.1 (obsolete); L5ZH95.1 (obsolete); L5ZKS5.1 (obsolete); L6A2S2.1 (obsolete); L6A7R6.1 (obsolete); L6APT2.1 (obsolete); L6B959.1 (obsolete); L6BV30.1 (obsolete); L6C2V7.1 (obsolete); L6CB61.1 (obsolete); L6CX95.1 (obsolete); L6D2R2.1 (obsolete); L6DYK1.1 (obsolete); L6E2G1.1 (obsolete); L6ECX2.1 (obsolete); L6F2X8.1 (obsolete); L6FBL9.1 (obsolete); L6FXC0.1 (obsolete); L6GAQ7.1 (obsolete); L6GDF3.1 (obsolete); L6GQ18.1 (obsolete); L6GUK0.1 (obsolete); L6HEM7.1 (obsolete); L6HZ42.1 (obsolete); L6IJA8.1 (obsolete); L6IKQ8.1 (obsolete); L6JAX7.1 (obsolete); L6JQW5.1 (obsolete); L6JTZ9.1 (obsolete); L6KHV2.1 (obsolete); L6KJ96.1 (obsolete); L6KPE7.1 (obsolete); L6LIS9.1 (obsolete); L6LRL1.1 (obsolete); L6M479.1 (obsolete); L6MJ49.1 (obsolete); L6MRV4.1 (obsolete); L6N4S1.1 (obsolete); L6NJT7.1 (obsolete); L6NQD7.1 (obsolete); L6NYY9.1 (obsolete); L6PTJ6.1 (obsolete); L6Q5G9.1 (obsolete); L6QG28.1 (obsolete); L6RD28.1 (obsolete); L6RT68.1 (obsolete); L6S8W2.1 (obsolete); L6SG06.1 (obsolete); L6ST86.1 (obsolete); L6TMF4.1 (obsolete); L6TTR9.1 (obsolete); L6U0S5.1 (obsolete); L6UCM0.1 (obsolete); L6UY97.1 (obsolete); L6V2H8.1 (obsolete); L6VEW0.1 (obsolete); L6VGW5.1 (obsolete); L6VM83.1 (obsolete); L6W988.1 (obsolete); L6WWB6.1 (obsolete); L6WY56.1 (obsolete); L6X469.1 (obsolete); L6Y0M1.1 (obsolete); L6YE57.1 (obsolete); L6YI25.1 (obsolete); L6Z0U5.1 (obsolete); L6ZMA5.1 (obsolete); L6ZXN5.1 (obsolete); L9Q2Z1.1 (obsolete); L9Q651.1 (obsolete); L9QWK6.1 (obsolete); L9RTY2.1 (obsolete); L9RZ23.1 (obsolete); L9RZV7.1 (obsolete); L9SPL8.1 (obsolete); L9SUR8.1 (obsolete); L9T0I1.1 (obsolete); L9T3F0.1 (obsolete); M9XM34.1 (obsolete); R7RAX9.1 (obsolete); S4HPD6.1 (obsolete); S4IA20.1 (obsolete); S4IYB2.1 (obsolete); S4JUW3.1 (obsolete); S4KAX3.1 (obsolete); S4KSA9.1 (obsolete); S4KVH5.1 (obsolete); S4LU50.1 (obsolete); S5HC55.1 (obsolete); S5IK76.1 (obsolete); S5V9L5.1 (obsolete); T1YEZ9.1 (obsolete); T2PZY7.1 (obsolete); T2QEG8.1 (obsolete); U1J3E4.1 (obsolete); U1RUM6.1 (obsolete); U3SIJ4.1 (obsolete); U6QI94.1 (obsolete); U6QL14.1 (obsolete); U6VL57.1 (obsolete); U6W0G5.1 (obsolete); U6WAX9.1 (obsolete); U6X5N2.1 (obsolete); U6XU02.1 (obsolete); U6XUE1.1 (obsolete); U6Z0B9.1 (obsolete); V0GUR1.1 (obsolete); V0JCU6.1 (obsolete); V1FK33.1 (obsolete); V1G2K9.1 (obsolete); V1GCR6.1 (obsolete); V1IGN7.1 (obsolete); V1IMQ3.1 (obsolete); V1JBW5.1 (obsolete); V1K0S1.1 (obsolete); V1KS42.1 (obsolete); V1LZZ7.1 (obsolete); V1NPU7.1 (obsolete); V1NX60.1 (obsolete); V1Q9V0.1 (obsolete); V1QHX1.1 (obsolete); V1RCP8.1 (obsolete); V1YX44.1 (obsolete); V2CQS1.1 (obsolete); V2D2U7.1 (obsolete); V2DLF9.1 (obsolete); V2F5F1.1 (obsolete); V2F5Q4.1 (obsolete); V2MGV5.1 (obsolete); V2NI96.1 (obsolete); V2NYL4.1 (obsolete); V2PHB9.1 (obsolete); V5KNP2.1 (obsolete); V5ZLN4.1 (obsolete); V7RZQ1.1 (obsolete); V7WUI4.1 (obsolete); V7X4V6.1 (obsolete); V8M2J1.1 (obsolete); V8ML76.1 (obsolete); X4RML9.1 (obsolete); X5NKI0.1 (obsolete),MFFTQNLWVERQQLIKPFILNVNIIYLKNIIIFFIIGGY,-1.194574836126887
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65
65
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UPI00016B0142,38,NA,MRDTQCHSADFPVYPNVLAVGVRRALWPLPAQDANRTQ,0.44996359010503817
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66
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-
UPI000173114C,30,B2L4W4,PADDMPTXRNGPSTTNDSDDFVDPWTVQTG,1.3068624916447211
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@@ -0,0 +1,101 @@
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1
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+
id,sequence
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2
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1,TGTCTCAGCACCATCCAATTTGCGATTCGACCC
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3
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2,TGTCTCTCATCAAATCATCCCTATGGTGGCCCTAATT
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4
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3,ATTTATCAACGATCATCCCAACAAAGCGAAACCGTCAT
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5
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4,CGAGGCCAGCCCTCATCCAATAGAACACCTTCGTG
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6
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+
5,TGGGTCACCCTTCATCCCCCACTCCTACTAGGA
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7
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+
6,TTTATTCATCGGTCATCCACGTGCGTATACATATG
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8
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+
7,GACCTCAACTGTCCTCCGGGAGACATGCCCGAAAT
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9
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+
8,CTGCATCAGCTGTCATCCCCTGGTGAGGTTTCTTGTG
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10
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9,TATTTTCACCTATCATCGTTAATGGCTAACCGGCAT
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11
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+
10,CGCCTTCAGCGGACATCCTATACAGTCGGCCCACTT
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12
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11,ACGCTTCACCCCTCATCCATAACTTTTCGTAGTC
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13
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12,AATCCTCAACATTCATCGCGAAGTAAAGGTCCTTTA
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14
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13,TCGCTTTCAGCGCTCATCCCCAAATCTTCCCAAAAAG
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15
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14,CCATGTTCATCGATCATCCGTAACGTCATACTTAGT
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16
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15,CAAACTCATCATTTATCTATAGTCTTCCGCGAT
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17
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16,CGTTCTCAGCCTCATCCTATGTTCAGCCGGCGT
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18
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17,GTTAGTCATCGCTCATCCTGTCGGCAACTCCTTAC
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19
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18,GGTCGTCACCGTTCATCCTTCAGATCAGCAATGTGTAC
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20
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+
19,AGACATCAACTCTCAGCCTGCAATGATTACCGATA
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21
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20,TGTATTCATCCTCATCCCAGGTAATGTGACTATCT
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22
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21,ATGGTCAGCGTCCATCAGGAGAATTTTACATACG
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23
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22,TATCTTCAGCGGACATCCTATGTCGCGCACAGACAT
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24
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23,CCATACTCAGCTAGCATCCCAGACCGATCTCATCTC
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25
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24,TCCCTTCAGCTTTCATCCAGACGACTGTTCAAAAA
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26
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25,TCCGTTCAACACGCATCCTCTGACGAGACTCAAGA
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27
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26,CGCATCAGCGATCCTCCGGCAGTGTGGCCCGCTGA
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28
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27,TGCGCTCAACTTTCATCCTGGCGTCCAGGCGAG
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29
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28,TTTCTTCAGCGCTCATCAAAAGGTCCCAGCCATA
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30
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29,TCACGTCACCCATCATCCATCGGACAGACCCCCC
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31
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30,GATTGTTCAACCCTTATCTGAGCGTTATCCCGGCGAG
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32
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31,GAGCTTCATCCGTCATCCCACGAGAAGTACTGGTA
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33
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32,CCTGTTCATCCTTCATCCTGAGGTACAAACCCCCT
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34
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33,AGACGTCAGCCTTCACCGAGATTCTATTCCACATTA
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35
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34,GTGCGTCAGCAGTCATCCTTCTGAACCGGCGGATC
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36
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35,TTTGGTCAGCGATCATCCGTGCGATTGTTACGTCGG
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37
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36,TTGTTTCAGCTGTCATCCAACAAGCTGGCCTATC
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38
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37,CGGTGTCAGCCATCATTCGAACGAGTAGCCGCGGC
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39
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38,TGGGTTCACTCCTTCATCGGGTACGGACCCCAAGCA
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40
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39,CCTATTCATCCCCTCATCGAACAGATTAGCCGAAAC
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41
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40,GGAGGTCACCCTTCATCCTGGTACTGGCAAGA
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42
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41,GGCACTCAGCTCTCATCACGACTATTCGGCAGAGG
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43
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+
42,CGGTATCAACGGTCATCTAACTTGATGATTCCCTCA
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44
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+
43,GACTTTCACCAATCATCAGAGGGGTAGCACCTCGAA
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45
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+
44,AGACGTCAACCCGCATCAAACTGGTTGCACACCA
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46
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+
45,CAGTTCAGCAAATCATCCCTCTTGTACGACCCTAG
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47
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46,CCAAATCACCGATCATCTAAACCCCTAGACAGCGC
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48
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47,TCTGGTAAACCCTCATCCCCGATAAAGCAGCTATAA
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49
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+
48,ACTATTCAACCTCATCCGAGAGCCCGCTACGT
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50
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49,TACAAGTCAGCGGCCATCCGCCGATGTGCACTCAGC
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51
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50,TTTAGGTTCAGCAGTTTATCCTCCAAGTTTTTCCTCA
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52
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51,TCTATCTCAGCCTTCATCCAGAACGGTAGTCCTTGTT
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53
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+
52,GGGAGCTCAGCTCTCATCAAGATAGATCACCGATT
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54
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+
53,TGACTTCATCACTCATCCGACAGATCACCACTAA
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55
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+
54,GCTATCAGCCCTCATCAACTAAGGCGAGCGGAAA
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56
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+
55,TTTAATCAGCGGTCATCAACCCAGCGCGCACACACCG
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57
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+
56,TGGCATTCATCCGTCATCCAAACGTCCGCGACCATCA
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58
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57,TATGGTCAGCAGTCATCCGCAGCAGCAAACATGGA
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59
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58,AAGCTCATCGGTCAGCCGACGGTAAATACTAAAG
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60
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59,CCGTTCAGCCGACAACCGGGATTCCGCACAGCCT
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61
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60,TTAGTCATCGATCATCCGGGATCTTACGCGTTAT
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62
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61,GGTATCAGCATTCATCCCACAAACCAATAGCCCTCTA
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63
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+
62,TACCATCAGCTGTCATCGCGTGTAGGCAGACCACCTC
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64
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+
63,AGTTGTCAACCTCATCCAGACCTCCCTTCCTGAGA
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65
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+
64,ACCAGTCAGCGATCATCCGCATCTGTTCCCCCGCC
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66
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65,CTGGACCAGCTCACACCCTAGCGAGCAGGCAGGGAG
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67
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66,CTATCGTTCAGCGATCATCCACTGGCGGATCCTTGGG
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68
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+
67,AGATATCAGCGATCATCGCCGTGTCACACCTAGAC
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69
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+
68,GCGGTTCAGCATCATCCGTAAGTCGATTCCGACT
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70
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+
69,CCGCTTCATCGCTCATCCCTGGGGGGACGCAGAAT
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71
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+
70,GATTTCAACGATCATCCTCATCGACGTTGCCAGA
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72
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+
71,TGCCCTCAGCGATCATCCGATGGTGCAGGCCTCGG
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73
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+
72,CGTTATCAGGCCGTCATCCACGCTGGCTACGAGCCT
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74
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73,GCTGTTCACCGCTCATCCGATGGGTGATACATCGC
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75
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+
74,TGCCCTCAGCACCCATCCCAACGGTTAGTCCGGA
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76
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+
75,TGTCATCAGCGTTCATCTTTCGACCCGTACCAAAGC
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77
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+
76,GGTCCCAGCATTCATCTATTTCAGGCGTACTCGG
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78
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+
77,CCCTGTCAGCGGTCATCCCAGGGACGATCCGTACA
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79
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+
78,CGGGTTCAGCACTCATCCTGTTGGTTTACCGACTTA
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80
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+
79,TACAATCAGCGTTCATCCCGGGTTTTTCTCCTGCT
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81
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80,CGGCATCAGCTTCATCCATTGGGTTTGTCTTGA
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82
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+
81,CTCAATCAGGCTGTCATCCTCTGGGTTAGCCAATGG
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83
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+
82,TGCAATCAACGATTCATCCGGCTTCCTCCTCGGAT
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84
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+
83,AGGCTTCAGCTTTCATTAGGCAGACATTGCCATCCGA
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85
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+
84,CCTAGTCAGTAATTCATCACAAATGAAAGAACAGTC
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86
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+
85,TTCATTCAGCCCTCATCAGCCATGCCCCTCCGTC
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87
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+
86,GTCATCAACTCTCATCACTAACATCAAGCGAAT
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88
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+
87,GGTCTTCAACCATCATCCTGGGGATACACCTACT
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89
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+
88,TCGTCTCAGCCCTCATCCCACAGTCGATACCCCCC
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90
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+
89,AGAACTCAACCCTCAACCGGACAGGACCACTC
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91
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+
90,AGCCGTCAGCTATCATCCTCCTTATTTGTCATAGC
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92
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+
91,CGTTCAACGGTCATCCGTACCTGATCTCCTTGA
|
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93
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+
92,CGTTCTTCATCCCTCATCCGACATGGTAGACTGGGCC
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94
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+
93,TAGATTCAACGGTCATCCAGACCTACGTTCCCGACA
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95
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+
94,TCTGTCAGCCATCATCCGAGTCACCATCCTTGT
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96
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+
95,GGTTCTCAGCGTTCAGCCTGCCTGAGCCCGCGGCCA
|
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97
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+
96,AGTGTTCAGCATCATCCGAATAAGGCTGCAACTT
|
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98
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+
97,TTCGATCATCGGGCATCGCGGGGATTGTCCGACTG
|
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99
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+
98,TTTCATCAGCGTTCATCGAGGTGTGTACCCCAACTC
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100
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+
99,GTGCTTCAGCTCTCATCAGACGAAAGGGACGAGG
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101
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+
100,TCCGTTCATCAGTCATCTAGCGGCGCTATCGTAGTG
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@@ -0,0 +1,101 @@
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1
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+
id,sequence
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2
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+
1,MFITMFCMFWLFIFILMMLIFFMEAMIKPML
|
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3
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+
2,AQMTMFCIMFFLMLMFIIMIMFMILEAMKKMLNAI
|
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4
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+
3,ILMTMFCICWMIMIFFLLLIMFMLMAMMKMLIFL
|
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5
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+
4,FQMTMICMLFFLMMFMFDLIILFIMMEAMMKPDLMFI
|
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6
|
+
5,LLMTMFCFFMMLLMFFMFMIMFMYFEAMKKFFILF
|
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7
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+
6,AMMTMFCFMLIMMFILLFIDIIMEAMLKLDNFI
|
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8
|
+
7,LLMTMFCMILISMIMILMMIMFLMEAMKKIFFAV
|
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9
|
+
8,LIMTMFCMLILIFMLMDFMIIMIFFEAMFKMLFLMF
|
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10
|
+
9,FQMTMFCLMIFMWIFMMMMILDIFIEAMIKFINLFM
|
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11
|
+
10,FLMTMFCILINIMIIWMIIMLMFEAMFKLDIIF
|
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12
|
+
11,FFMTMFCMMIFLLLIMIIIMIMDMIMEAMKKMMDIII
|
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13
|
+
12,IMMTMFCICLLFWLLFMLLIMDMMFEAMLKFIMMI
|
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14
|
+
13,MQMTMFCFMLLLMFFMDIMIIMLLDEAMLKLDLIL
|
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15
|
+
14,LQMTMFCIFWMLFMLFMLFIFFLFLEAMLKFINLI
|
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16
|
+
15,IIMTMFCMIMIISIFFIIMIMLFIFEAMIKLDIIAM
|
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17
|
+
16,FLMTMLCMCFILFFFLFMFIMLSFFLEALIKILILI
|
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18
|
+
17,FQMTMFCMMIFLFIMWMIIFIIFFIFEAMKMLLLL
|
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19
|
+
18,MFMTMFCMCIMFWIFDIIIIILFLIEAMLKLFFIIV
|
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20
|
+
19,IMLMTMFCMFFFMWIFMFMLIIFSLILEAMMKPDIII
|
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21
|
+
20,AFLTMFCFMWLLMLMFLFLIMIIIDEAMIKLFFL
|
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22
|
+
21,FQMTMFCFLLMSFLMIIMIFILMFFDEAMFKILNFI
|
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23
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+
22,MIMTMFCMLMNLLMFFMLIILILMIEAMLKLMMAI
|
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24
|
+
23,MIMTMFCMIILMFHMMMFLIFILYEAMKKLFNMIV
|
|
25
|
+
24,LFTMFCMCWMIMIFWIIILMIMIFLAMKKPMFLF
|
|
26
|
+
25,AFLMTMFCICWFLFFLFMILIMLMFFEAMKKFFLV
|
|
27
|
+
26,LLMTMFCMCMNMMMFMLIMMILMSYIEAMFKFFLI
|
|
28
|
+
27,LQLTMFCFILLIFLMILLILMILFEAMMKMFFAL
|
|
29
|
+
28,IQMTMFCMMMMFLMLFFIDIMFLMMEMMFKMDLMFF
|
|
30
|
+
29,MMTMFCIWIFMMILDMMFFIIMIIAMMMFLLIIV
|
|
31
|
+
30,FQMTMFCMMLFMFILWDIFIMISMLEAMMKLDIIM
|
|
32
|
+
31,LFMTMFCMMMNFMIFWLILIFFSLFEAMKKLILAM
|
|
33
|
+
32,AFMTMFCMFLWFILHLWIFFIMMLIMIEAMIKIDIAV
|
|
34
|
+
33,LLTMFCMILIFWHFMFMDIMMMMIFEAMLMIFIMI
|
|
35
|
+
34,IMMTMFCFCFLIFHMMIFDIMISMIEAMKKIIMLL
|
|
36
|
+
35,FMMTMFCMMMLFIIMFLIMMIDILLFIDEAMMKDFIL
|
|
37
|
+
36,IMMTMFCMIILFMFMFMMIIIMLFFMLEAMFKMMFF
|
|
38
|
+
37,LLMTMFCMLWMMLFIFFIMLIFISLFEAMKKIFIIM
|
|
39
|
+
38,FIMTMFCMMLLLFFFIILDIMLMFIEAMKKLLLL
|
|
40
|
+
39,IMMTMFCFMMMSMMFFFLIIIILFMFDMAMKILLI
|
|
41
|
+
40,MFMTMFCMFILILLLWIIDIMFMLDEAMKKPDFL
|
|
42
|
+
41,LIMTMFCMCMFLILWMMFIMLIIIEAMKKPIILI
|
|
43
|
+
42,AFMTMFCFMMMFMHFMLIFIFMIFMEAMKKFFLFLM
|
|
44
|
+
43,AFIQMTMLCMCMLLMFFLDIFIIIIFLDEAMMKPLMLL
|
|
45
|
+
44,LQMTMFCMFMIILFDMIMMMMMEAMLKIMIF
|
|
46
|
+
45,ALMTMFCFIWNSIFIFIFDILMILLIEAMFKMDNII
|
|
47
|
+
46,LMMTMFCLMLFSWLMWLMIIFIIMMILEAMLKPLFAFV
|
|
48
|
+
47,FFMTMFCMFFIMFLIFFLLLIMLFMMEAMLKIFL
|
|
49
|
+
48,LMMMTMFCIFMLLFFFFMFIMMMFDEAMFKMDMIL
|
|
50
|
+
49,QITMFCIFFMFIIMWLFFFLFFLFEAMLKMIMAL
|
|
51
|
+
50,IIMTMFCIMLILWIFLFIIIIMILIAMKKLILLL
|
|
52
|
+
51,ILMTMFCMMLIIFFFMLFFILIILDFFFEAMLKIDMMI
|
|
53
|
+
52,FIMTMFCMCWFILLIMMIIIFLIDEAMMKMFLMM
|
|
54
|
+
53,FIMTMFCMLLMFSLMFFMMMILIFYIEAMIKMMLFI
|
|
55
|
+
54,IQMTMFCMCWMFLHMMFLDILFIFLDEAMLKMIIFL
|
|
56
|
+
55,FMMTMFCMLILMMHLFFFIIMDMIEAMLKMDMLV
|
|
57
|
+
56,LMMTMFCMFINSMLLMMFILILMMLFEAMKKPFMIM
|
|
58
|
+
57,MLMTMFCLIMNFFMFLMFMIMMMEAMFKMLM
|
|
59
|
+
58,ILMTMFCLFFFSFFFILIMMIYIEAMLKIMMIL
|
|
60
|
+
59,IIMMTMFCMCLLMLMFWIIMIMISFLMEAMKKFLIAM
|
|
61
|
+
60,IFMTMFCMMFNSFLIFWIILMFFLLILEAMMKPLNLV
|
|
62
|
+
61,IFITMFCMILLSMLFILFDIFFIIMEIMKKFIIAF
|
|
63
|
+
62,IMMTMFCFCMIMFMFILFLILFLDEAMMKMLIL
|
|
64
|
+
63,IFMTMFCMFLMFMIMLLFDIFLSFFEAMKKFFIAV
|
|
65
|
+
64,IQMTMFCMIFFSMMFFMDMDIMIFIIEAMFKMNMLL
|
|
66
|
+
65,LFMTMFCMFLLMFILFFIIMDFYFFEAMKKPMLILL
|
|
67
|
+
66,AMMTMFCMLLMMFHMLDFIFDFFMEAMKKMMML
|
|
68
|
+
67,AIMTMFCMFLNLMLMMFIFMMIDEAMIKFLLFI
|
|
69
|
+
68,MFMTMFCMFIIFLIIMMDLIIMIIMLEAMIFILILLL
|
|
70
|
+
69,IFMTMFFMFMMIIFWLMWDLMIIFSIMIMAMIKLMMAL
|
|
71
|
+
70,ILMTMFCMMLFLLFFFLIIIIFSMMEAMMKPDIMM
|
|
72
|
+
71,FFMTMFCMFFIFLHMIFFDIFLFFYLEAMMKPMFFI
|
|
73
|
+
72,MFMTMFCMLWMFMLHIMFFLIMMMLFEAMFKFMLAF
|
|
74
|
+
73,AIMTMFCMMIMMIMLFFLLILMFLIEAMFKFIFFM
|
|
75
|
+
74,MMMTMFCMLMFWIIFIIFLIFILMIEAMFKMINIV
|
|
76
|
+
75,LLMTMFCMLIMLIMLWLMDIMMMLIEAMKKPLMFFL
|
|
77
|
+
76,LQITMFIMMWILLFMIFIFILFFEAMMKFMLF
|
|
78
|
+
77,ILMTMFCIFFIFFMFMFMFFIMFFLIEAMKKLDIML
|
|
79
|
+
78,MLMTMLCMMMFSLLIFIFLDIIIFILEAMLKFMMI
|
|
80
|
+
79,ILMTMFCMCMMMIMMIIIIMDSFLEAMKKPMMMI
|
|
81
|
+
80,QMTMFCMMFFIIHMMIIFFMDLIMMLAMKKPDMAI
|
|
82
|
+
81,LLMTMICILFFMFMFLMMLIIMFLYFEAMMKMLNII
|
|
83
|
+
82,MMMMFCMFIFFIHFMLILIMLIYMMIMKIMMNML
|
|
84
|
+
83,ALMTMFCMFIFFMLMMMIIIFFFFEAMMKMFIFV
|
|
85
|
+
84,ALMTMFCMWLILMWFMIIILMMDEAMKKLLNIL
|
|
86
|
+
85,LIIMTMFCMMLLLIIMMFLIFIFLLEAMIKFLLFLL
|
|
87
|
+
86,MLMTMFCMLLMFHFLIMMILISYFEAMKKLIFML
|
|
88
|
+
87,FIMTMFCMMIFIFFFMFDIILSMMAMFKIDLIM
|
|
89
|
+
88,FMTMFCMMWLSLFFMFLILFFIFIEAMFKLMNFV
|
|
90
|
+
89,MMMTMMCMLLIMFLFMFIMFIFMLIEAMKKLDLLI
|
|
91
|
+
90,AFMTMFCFMFISWMMIIFMLIMFILFEAMMKMFFFL
|
|
92
|
+
91,LIMTMFCMIWFIMHFLILMLIMILYLEAMFKPLIFF
|
|
93
|
+
92,MIMTMFCMFINLWIFFLLDIFFLIMEAMKLDMIM
|
|
94
|
+
93,LLMTMFCMFIIMLFFLFMFLIMFFIDEAMFKPLFIM
|
|
95
|
+
94,FFMTMFCIFFMSLHLFMLLIIFMFDEAMKKMLLFI
|
|
96
|
+
95,IFFTMFLIFLLFIMMMIDMIIFILLEAMKKPMFII
|
|
97
|
+
96,MFMMTMFCFMIIFFMMMDIMIIMDFILEAMLKIFLIII
|
|
98
|
+
97,IIMTMFCMIINMLFFDLLIIILLEAMLKFDMFF
|
|
99
|
+
98,MLMTMFCMLLIMFMILILMFIFLLYDEAMKKMLMLI
|
|
100
|
+
99,LFMTMFCMLINSLIMIFFDIIIFLEAMFKFFLILL
|
|
101
|
+
100,FLMTMFCMMMFSMMMMFIIFMLLIEAMLKIFNAL
|
|
@@ -0,0 +1,101 @@
|
|
|
1
|
+
id,sequence
|
|
2
|
+
1,AAGGCCAGCAAAGUCUUCACGAGAGCGCGGAAACUU
|
|
3
|
+
2,AGGCCAUACGACUAAUUCUGAAUCUGCGGAAAUCA
|
|
4
|
+
3,GUGCCCGCAUCUUCAGUGGUGUAAUUUGCGGAUGCUCG
|
|
5
|
+
4,GGGCCAGAAUACAUAGCUAAGCAGCUGCGAACGGUA
|
|
6
|
+
5,CUGCCAGCCUUGAAAAGGCGGUCGCGCGGAGCUAA
|
|
7
|
+
6,AGGCCAGCUUCUCACUGUCUCGUUCGCGGAUAGCA
|
|
8
|
+
7,UAGCCAGCAAUAUUAGUAGGAAUAGCGGAGGCCA
|
|
9
|
+
8,ACGCCAGUACCGCGCAUAGGAGCAGCGUACCCUA
|
|
10
|
+
9,AUGCCAGCUCAUCACCAUAGCCCUGCGGAUGGCCG
|
|
11
|
+
10,ACGCCAGCAAUAGCACCUAGUCCCUUGCGGACAUCA
|
|
12
|
+
11,CGGCCAGCUGCUCUCGGGGACUAGCGAAUGGGG
|
|
13
|
+
12,CUCCCAGCCAGACAUGCGUGAGUCUAGCGUAACAC
|
|
14
|
+
13,GGGCCAGCCUGAUUUGGCGCGAACGAGCGGAACGA
|
|
15
|
+
14,CUGUCCAGCAUUUGGGAGCAGUUCUAGCGCACGGCG
|
|
16
|
+
15,GCGCCAGCUCGUUUUGCGGUGUGCGUGCGGAACUA
|
|
17
|
+
16,UCGCCGGCCGUUGUUACCGGACAUGCGGCAAGUCU
|
|
18
|
+
17,GGGCCAGCGGUAACCGGAGGCGUGUGCGUAUGCUA
|
|
19
|
+
18,UGGCCAGUGUUAUCAUUGAUGGGCGCACAAAA
|
|
20
|
+
19,GGGCCAGCAAAUCGUAGGAAGUAAAUGCGCAUCCCA
|
|
21
|
+
20,GGGCCAGGAAUCAAUAAGUGCAGGAGCGUAACAU
|
|
22
|
+
21,UAUGCCAGCGGGCGAUGUGAAUAAUUCGCGGACCGGU
|
|
23
|
+
22,GUACCAGAAUAGAAUGCUAGAUACGGCGAAUUGCA
|
|
24
|
+
23,CGGCCAGCCCGCGGCAGCGCGUUAGCGGACGCGU
|
|
25
|
+
24,GUGCCAGCUCUGUUCCUCCGCUUAGGCGAAUCUG
|
|
26
|
+
25,GUGCCAGCGCAAUUCGCGAGCCAUGUGCGCAGCACG
|
|
27
|
+
26,AAGCCAGCCACGCCUGAGAGGCAUCCUCGCGGACGCC
|
|
28
|
+
27,UGCCUGUCGACGGCCGAGCGGCGGCGUACGAGC
|
|
29
|
+
28,CGGCCAGCGAUCUUUUUGUGGGGGGGCGCACAAAU
|
|
30
|
+
29,CAAGCCAGCAAGCUACAUAGGGUGUGCGGAGGUA
|
|
31
|
+
30,CGGCCAGCCCCACUUACGUAGUGUAGCGCAUUCUA
|
|
32
|
+
31,GGCCCAGCAACGUUCGAAUGCACCGGCGUAACCGC
|
|
33
|
+
32,UAGCCAGCUUCUUAACACAUGCACGAGCGAAGAACG
|
|
34
|
+
33,GAGGUAGCCUAACAAGGAUUAGUUUGGGCGGAUGACU
|
|
35
|
+
34,UGGCCUGACGUAACCAUUCGAACAGCGGACGCGG
|
|
36
|
+
35,GGCCAGCUUGUCUUAACCGAAUGAGCGAAAGUUU
|
|
37
|
+
36,GUGCCAGCGCGCGGCGACGCAACAGCGGUAGCGU
|
|
38
|
+
37,UUGCCAGCGUGUGGAGCCGAUUUGCGCAAUGUA
|
|
39
|
+
38,GACGCCAGCUCGGAGAUAGUGAUGAUGCGGAUAGGG
|
|
40
|
+
39,CAGCCAGAUCAUCGUAAGAGAGUGCGGAACCA
|
|
41
|
+
40,UUGCCAGGUAGCAUUCGCUGAGGGGCGGAGAGAA
|
|
42
|
+
41,CGGCCGGCGUGAGUAAGGUGCACUUGCGGAGUUGG
|
|
43
|
+
42,UGACCAGCCAGGCCCUGAUGAAUGCGGCGGAAUCUU
|
|
44
|
+
43,CAGCCAGCCCCGGCAAGGUAGCGUCAGCGGAUUGGA
|
|
45
|
+
44,AGGCCAGCAAGAAGCGCAGCACGCCGGGGACCAC
|
|
46
|
+
45,UCGCCAGCUAGUUGACAUAGAAUACGCGGACAAGUA
|
|
47
|
+
46,GUGCCUGCUUCAAAAGAGGGUCCGCGCACCCGG
|
|
48
|
+
47,GAGCCAGAUGGGCCAGGUGUAGUUGAGGACCCG
|
|
49
|
+
48,UGGCCUGCGGGCAUGUCAAGGUCAAGCGGAUAUA
|
|
50
|
+
49,GCGCCAGUGACCGUCUUAUGACUUAACGGGCUCA
|
|
51
|
+
50,GGCCAGAUGUCACGGUUUGCUGAGGCGGACGGA
|
|
52
|
+
51,ACGCCAGAUAUUCACGACCCGGGGCCGCGGAAGGUU
|
|
53
|
+
52,CUGCCAGCUUUUAUAAGCAGGUAUGUGCGCAUCAAUG
|
|
54
|
+
53,ACGCCAGUUACUGCAAAACGCACAGCGCACCCAC
|
|
55
|
+
54,GCGCCAGACUCGUAGGCUCGCUGGGUGCGGAUGUAA
|
|
56
|
+
55,GAGCCAGCAGUAGCGAUAGGUUGCCGCGGAGCCGG
|
|
57
|
+
56,AGGCCUGCUUGCCCCGGGAAUGGGCCUGCGUAGCUG
|
|
58
|
+
57,UAGCCAAGUGACAACUGUAGGUCGCGCGAAUGCCC
|
|
59
|
+
58,CAGCCAGCUGUUCUCAGCGUGGGAGCGGAAGCAG
|
|
60
|
+
59,CCUCCAGGUAUAUGGACGGCAGCUGCGGAUAUGA
|
|
61
|
+
60,CCGCCAGCGAACUAAAAAGGACGGCAGCGAAAUCUG
|
|
62
|
+
61,ACGCCAGCAAAAAACGGGUGUGUGUGCGGAUUUGA
|
|
63
|
+
62,GGACCAGUUAUGAUGUAGAGGAAGAGCAGAACAAUA
|
|
64
|
+
63,GGGCCAGCCGGUUCACCGGACGGUGCGGAAGGC
|
|
65
|
+
64,GGACCAGCGGCAGACCGACGCCUGUGCGUAUUAAA
|
|
66
|
+
65,GUGCCAGCGGUCUCCGCCAGUAUCGGCGUAUCUCA
|
|
67
|
+
66,UAGCCAGCUAAAUACUCACGGGUUUGCGGAACCCG
|
|
68
|
+
67,GUGCCAGCGCGGUUACAGGGCAGCAGGCGGACGACA
|
|
69
|
+
68,UGGCCAGCAGCCGACUCGCCAGUGCGGACUAC
|
|
70
|
+
69,GGCCACCGAGCACGGGUUGUACGUGCGGAUGAGCG
|
|
71
|
+
70,UAGCCAGCCCUAGUCAGACGAGAACGCGAAUAUGUGG
|
|
72
|
+
71,UUGGCCAGCGCAGCGUCAUCGCCGCGCGCAUGUG
|
|
73
|
+
72,CAGCCAGCCGCUCAUGAAAGCUGAGCGUAUUAA
|
|
74
|
+
73,CGGCCAGCUGUGAACACGCAGUAGCUGCGCAGUCC
|
|
75
|
+
74,AAGCCAGGUUUCGUCGCCCUGCUGGAUCGCAUCGCAG
|
|
76
|
+
75,UAGCCAGCUAGCUUUAGCGAAGGCAAGCGGCCGGAAC
|
|
77
|
+
76,GAGCCGGUAAAUGCCGCCGAGCAGCACCGGAUUAGC
|
|
78
|
+
77,CCAGCCAGCCAUGAUCACGCGUUCUCAGCGGAUGCGA
|
|
79
|
+
78,GGGCCAGCCUUUUACGCGUCCCCGCGUAGAAA
|
|
80
|
+
79,GGGCCAGCUUCACGAUGUACGACCCGGGGGAACCUG
|
|
81
|
+
80,GACCGUUGGCCGGUGAAGCAUCUGCGGAUGCAA
|
|
82
|
+
81,AGGCCAGGAAAUUCCUGAGAGAUAUCCGGACGCCC
|
|
83
|
+
82,AGGCCAGCCAUCAUACCCCUGUUGAAAAGGCGGAUAUGA
|
|
84
|
+
83,CAGCCAGGUGUCAUAAGCGGCCUCCGCGAAAGGA
|
|
85
|
+
84,GCGCCGGCGGUUGCAUCGGACCUAGCGCAUGCGC
|
|
86
|
+
85,GGGCCAGCGUGUUAAUUGUGAUCACGCGUAAAGUGU
|
|
87
|
+
86,UAGCCAGCUAUGGGACAAGUAAGGCGAACGCAU
|
|
88
|
+
87,GUGCCAGCAAUAAUACCUAAGAUUCAGCGGAGGAU
|
|
89
|
+
88,AGCCCCAGAUUUGUACCUCAGUCUGCGGCGGAGUGA
|
|
90
|
+
89,UGGCCAGUCUCAACGCAUGAGCACGCGAACGACA
|
|
91
|
+
90,AAGCCAGCCUUCGCUGGAUGGAUUUGCGCAACCUA
|
|
92
|
+
91,GUGCCAGUGAUUAACGGAUUCUGCUGCGGACUCCC
|
|
93
|
+
92,GGGCCGGAUACUCUGAUGCUGCAGAAGCGAAGUGAU
|
|
94
|
+
93,UUCGCCAGGAGAUAUCCUAUGGGUGGUGCGCAACAA
|
|
95
|
+
94,UAGCCACCUCAAUAUGCAAUGGUGCAGCGGAGGCGA
|
|
96
|
+
95,GCGCCAGCUAUUCUGGUGGGUCUCUGCGGAUACUG
|
|
97
|
+
96,GAGCCAGGGUACCUCAUUCGCCGCACGCGUAGCCUGA
|
|
98
|
+
97,GAGCCAGGAGGUUCGUUAGGAAUCUGCGGAAGGGA
|
|
99
|
+
98,AAACCAGGAUCAAUAACAAGAAGACGCGCACAGCGC
|
|
100
|
+
99,GAGCCAGCGGGUUUUUGAGGAGAUCUGCGGACGUUC
|
|
101
|
+
100,GAGCCAGCUACCGAAAGGGCACAGCGGACUUUACG
|