@datagrok-libraries/bio 5.9.7 → 5.9.11

package/src/utils/monomer-library.js

@@ -1,154 +0,0 @@
-/** HELM associated sdf libraries with monomer processing*/
-export class MonomerLibrary {
-    constructor(sdf) {
-        this.monomerFields = [
-            'molecule', 'MonomerType', 'MonomerNaturalAnalogCode', 'MonomerName', 'MonomerCode', 'MonomerCaps', 'BranchMonomer',
-        ];
-        this.library = {};
-        this.monomers = [];
-        const sdfReader = new SDFReader();
-        const data = sdfReader.getColls(sdf);
-        this.monomerFields.forEach((f) => {
-            if (!(f in data))
-                throw new Error(`Monomer library was not compiled: ${f} field is absent in provided file`);
-            if (data[f].length != data.molecule.length)
-                throw new Error(`Monomer library was not compiled: ${f} field is not presented for each monomer`);
-        });
-        for (let i = 0; i < data.molecule.length; i++) {
-            const linkData = this.getLinkData(data.molecule[i], data.MonomerCaps[i], data.MonomerName[i]);
-            const entry = {
-                mol: data.molecule[i],
-                type: 'Peptide',
-                code: data.MonomerCode[i],
-                analogueCode: data.MonomerNaturalAnalogCode[i],
-                linkages: linkData,
-            };
-            const name = data.MonomerCode[i] !== '.' ? data.MonomerCode[i] : data.MonomerName[i];
-            this.library[name] = entry;
-            this.monomers.push(name);
-        }
-    }
-    /** getting full monomer information from monomer library
-     * @param {string} name
-     * @return {MonomerEntry}
-     */
-    getMonomerEntry(name) {
-        if (!this.monomers.includes(name))
-            throw new Error(`Monomer library do not contain ${name} monomer`);
-        return this.library[name];
-    }
-    /** getting mol as string for monomer
-     * @param {string} name
-     * @return {string}
-     */
-    getMonomerMol(name) {
-        if (!this.monomers.includes(name))
-            throw new Error(`Monomer library do not contain ${name} monomer`);
-        const entry = this.library[name];
-        let monomerMol = entry.mol.replace(/M  RGP  .+\n/, '');
-        //order matters
-        const links = Object.keys(entry.linkages);
-        for (const link of links)
-            monomerMol = monomerMol.replace('R#', entry.linkages[link].type + ' ');
-        return monomerMol;
-    }
-    /** getting the list of the minomers available in library*/
-    get monomerNames() {
-        return this.monomers;
-    }
-    static get id() {
-        return MonomerLibrary.libName;
-    }
-    getLinkData(mol, caps, name) {
-        var _a;
-        const rawData = mol.match(/M  RGP  .+/);
-        if (rawData === null)
-            throw new Error(`Monomer library was not compiled: ${name} entry has no RGP`);
-        const types = {};
-        (_a = caps.split('\n')) === null || _a === void 0 ? void 0 : _a.forEach((e) => {
-            types[e.match(/\d+/)[0]] = e.match(/(?<=\])\w+/)[0];
-        });
-        const data = rawData[0].replace('M  RGP  ', '').split(/\s+/);
-        const res = {};
-        for (let i = 0; i < parseInt(data[0]); i++) {
-            const code = parseInt(data[2 * i + 2]);
-            let type = '';
-            switch (code) {
-                case 1:
-                    type = 'N-terminal';
-                    break;
-                case 2:
-                    type = 'C-terminal';
-                    break;
-                case 3:
-                    type = 'branch';
-                    break;
-                default:
-                    break;
-            }
-            res[type] = { atomNumber: parseInt(data[2 * i + 1]), type: types[code] };
-        }
-        return res;
-    }
-}
-MonomerLibrary.libName = 'monomerLibrary';
-//TODO: merge with Chem version
-class SDFReader {
-    constructor() {
-        this.dataColls = { 'molecule': [] };
-    }
-    getColls(content) {
-        this.read(content);
-        return this.dataColls;
-    }
-    read(content) {
-        content = content.replaceAll('\r', ''); //equalize old and new sdf standards
-        let startIndex = content.indexOf('$$$$', 0);
-        this.parse(content, 0, startIndex, (name, val) => {
-            this.dataColls[name] = [];
-            this.dataColls[name].push(val);
-        });
-        startIndex += 5;
-        while (startIndex > -1 && startIndex < content.length)
-            startIndex = this.readNext(content, startIndex);
-    }
-    readNext(content, startIndex) {
-        const nextStartIndex = content.indexOf('$$$$', startIndex);
-        if (nextStartIndex === -1) {
-            return -1;
-        }
-        else {
-            this.parse(content, startIndex, nextStartIndex, (name, val) => {
-                this.dataColls[name].push(val);
-            });
-        }
-        if (nextStartIndex > -1)
-            return nextStartIndex + 5;
-        return nextStartIndex;
-    }
-    parse(content, start, end, handler) {
-        const molEnd = +content.indexOf('M  END\n', start) + 7;
-        let localEnd = start;
-        this.dataColls['molecule'].push(content.substring(start, molEnd));
-        start = molEnd;
-        while (localEnd < end) {
-            start = content.indexOf('> <', localEnd);
-            if (start === -1)
-                return;
-            start += 3;
-            localEnd = content.indexOf('>\n', start);
-            if (localEnd === -1)
-                return;
-            const propertyName = content.substring(start, localEnd);
-            start = localEnd + 2;
-            localEnd = content.indexOf('\n', start);
-            if (localEnd === -1)
-                localEnd = end;
-            else if (content[localEnd + 1] != '\n')
-                localEnd = content.indexOf('\n', localEnd + 1);
-            handler(propertyName, content.substring(start, localEnd));
-            localEnd += 2;
-        }
-    }
-}
-//# sourceMappingURL=data:application/json;base64,{"version":3,"file":"monomer-library.js","sourceRoot":"","sources":["monomer-library.ts"],"names":[],"mappings":"AASA,2DAA2D;AAC3D,MAAM,OAAO,cAAc;IAWzB,YAAY,GAAW;QARf,kBAAa,GAAa;YAChC,UAAU,EAAE,aAAa,EAAE,0BAA0B,EAAE,aAAa,EAAE,aAAa,EAAE,aAAa,EAAE,eAAe;SACpH,CAAC;QAEM,YAAO,GAAmB,EAAE,CAAC;QAE7B,aAAQ,GAAa,EAAE,CAAC;QAG9B,MAAM,SAAS,GAAG,IAAI,SAAS,EAAE,CAAC;QAClC,MAAM,IAAI,GAAG,SAAS,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC;QACrC,IAAI,CAAC,aAAa,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,EAAE;YAC/B,IAAI,CAAC,CAAC,CAAC,IAAI,IAAI,CAAC;gBACd,MAAM,IAAI,KAAK,CAAC,qCAAqC,CAAC,mCAAmC,CAAC,CAAC;YAE7F,IAAI,IAAI,CAAC,CAAC,CAAC,CAAC,MAAM,IAAI,IAAI,CAAC,QAAQ,CAAC,MAAM;gBACxC,MAAM,IAAI,KAAK,CAAC,qCAAqC,CAAC,0CAA0C,CAAC,CAAC;QACtG,CAAC,CAAC,CAAC;QAEH,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,IAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;YAC7C,MAAM,QAAQ,GAAG,IAAI,CAAC,WAAW,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC,EAAE,IAAI,CAAC,WAAW,CAAC,CAAC,CAAC,EAAE,IAAI,CAAC,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC;YAC9F,MAAM,KAAK,GAAG;gBACZ,GAAG,EAAE,IAAI,CAAC,QAAQ,CAAC,CAAC,CAAC;gBACrB,IAAI,EAAE,SAAS;gBACf,IAAI,EAAE,IAAI,CAAC,WAAW,CAAC,CAAC,CAAC;gBACzB,YAAY,EAAE,IAAI,CAAC,wBAAwB,CAAC,CAAC,CAAC;gBAC9C,QAAQ,EAAE,QAAQ;aACnB,CAAC;YAEF,MAAM,IAAI,GAAG,IAAI,CAAC,WAAW,CAAC,CAAC,CAAC,KAAK,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,WAAW,CAAC,CAAC,CAAC,CAAC;YACrF,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,GAAG,KAAK,CAAC;YAC3B,IAAI,CAAC,QAAQ,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;SAC1B;IACH,CAAC;IAED;;;OAGG;IACI,eAAe,CAAC,IAAY;QACjC,IAAI,CAAC,IAAI,CAAC,QAAQ,CAAC,QAAQ,CAAC,IAAI,CAAC;YAC/B,MAAM,IAAI,KAAK,CAAC,kCAAkC,IAAI,UAAU,CAAC,CAAC;QAEpE,OAAO,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC;IAC5B,CAAC;IAED;;;OAGG;IACI,aAAa,CAAC,IAAY;QAC/B,IAAI,CAAC,IAAI,CAAC,QAAQ,CAAC,QAAQ,CAAC,IAAI,CAAC;YAC/B,MAAM,IAAI,KAAK,CAAC,kCAAkC,IAAI,UAAU,CAAC,CAAC;QAGpE,MAAM,KAAK,GAAG,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC;QACjC,IAAI,UAAU,GAAG,KAAK,CAAC,GAAG,CAAC,OAAO,CAAC,cAAc,EAAE,EAAE,CAAC,CAAC;QAEvD,eAAe;QACf,MAAM,KAAK,GAAG,MAAM,CAAC,IAAI,CAAC,KAAK,CAAC,QAAQ,CAAC,CAAC;QAC1C,KAAK,MAAM,IAAI,IAAI,KAAK;YACtB,UAAU,GAAG,UAAU,CAAC,OAAO,CAAC,IAAI,EAAE,KAAK,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,IAAI,GAAG,GAAG,CAAC,CAAC;QAGzE,OAAO,UAAU,CAAC;IACpB,CAAC;IAED,2DAA2D;IAC3D,IAAI,YAAY;QACd,OAAO,IAAI,CAAC,QAAQ,CAAC;IACvB,CAAC;IAED,MAAM,KAAK,EAAE;QACX,OAAO,cAAc,CAAC,OAAO,CAAC;IAChC,CAAC;IAEO,WAAW,CAAC,GAAW,EAAE,IAAY,EAAE,IAAY;;QACzD,MAAM,OAAO,GAAG,GAAG,CAAC,KAAK,CAAC,YAAY,CAAC,CAAC;QACxC,IAAI,OAAO,KAAK,IAAI;YAClB,MAAM,IAAI,KAAK,CAAC,qCAAqC,IAAI,mBAAmB,CAAC,CAAC;QAEhF,MAAM,KAAK,GAA+B,EAAE,CAAC;QAC7C,MAAA,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,0CAAE,OAAO,CAAC,CAAC,CAAC,EAAE,EAAE;YAC9B,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,KAAK,CAAE,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,KAAK,CAAC,YAAY,CAAE,CAAC,CAAC,CAAC,CAAC;QACxD,CAAC,CAAC,CAAC;QAEH,MAAM,IAAI,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,UAAU,EAAE,EAAE,CAAC,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC;QAC7D,MAAM,GAAG,GAAa,EAAE,CAAC;QACzB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE;YAC1C,MAAM,IAAI,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;YACvC,IAAI,IAAI,GAAG,EAAE,CAAC;YACd,QAAQ,IAAI,EAAE;gBACd,KAAK,CAAC;oBACJ,IAAI,GAAG,YAAY,CAAC;oBACpB,MAAM;gBACR,KAAK,CAAC;oBACJ,IAAI,GAAG,YAAY,CAAC;oBACpB,MAAM;gBACR,KAAK,CAAC;oBACJ,IAAI,GAAG,QAAQ,CAAC;oBAChB,MAAM;gBACR;oBACE,MAAM;aACP;YACD,GAAG,CAAC,IAAI,CAAC,GAAG,EAAC,UAAU,EAAE,QAAQ,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,IAAI,EAAE,KAAK,CAAC,IAAI,CAAC,EAAC,CAAC;SACxE;QAED,OAAO,GAAG,CAAC;IACb,CAAC;;AA9GM,sBAAO,GAAG,gBAAgB,CAAC;AAiHpC,+BAA+B;AAC/B,MAAM,SAAS;IAGb;QACE,IAAI,CAAC,SAAS,GAAG,EAAC,UAAU,EAAE,EAAE,EAAC,CAAC;IACpC,CAAC;IAED,QAAQ,CAAC,OAAe;QACtB,IAAI,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;QACnB,OAAO,IAAI,CAAC,SAAS,CAAC;IACxB,CAAC;IAED,IAAI,CAAC,OAAe;QAClB,OAAO,GAAG,OAAO,CAAC,UAAU,CAAC,IAAI,EAAE,EAAE,CAAC,CAAC,CAAC,oCAAoC;QAC5E,IAAI,UAAU,GAAG,OAAO,CAAC,OAAO,CAAC,MAAM,EAAE,CAAC,CAAC,CAAC;QAC5C,IAAI,CAAC,KAAK,CAAC,OAAO,EAAE,CAAC,EAAE,UAAU,EAAE,CAAC,IAAY,EAAE,GAAW,EAAQ,EAAE;YACrE,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,GAAG,EAAE,CAAC;YAC1B,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;QACjC,CAAC,CAAC,CAAC;QACH,UAAU,IAAI,CAAC,CAAC;QAChB,OAAO,UAAU,GAAG,CAAC,CAAC,IAAI,UAAU,GAAG,OAAO,CAAC,MAAM;YACnD,UAAU,GAAG,IAAI,CAAC,QAAQ,CAAC,OAAO,EAAE,UAAU,CAAC,CAAC;IACpD,CAAC;IAED,QAAQ,CAAC,OAAe,EAAE,UAAkB;QAC1C,MAAM,cAAc,GAAG,OAAO,CAAC,OAAO,CAAC,MAAM,EAAE,UAAU,CAAC,CAAC;QAC3D,IAAI,cAAc,KAAK,CAAC,CAAC,EAAE;YACzB,OAAO,CAAC,CAAC,CAAC;SACX;aAAM;YACL,IAAI,CAAC,KAAK,CAAC,OAAO,EAAE,UAAU,EAAE,cAAc,EAC5C,CAAC,IAAY,EAAE,GAAW,EAAQ,EAAE;gBAClC,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;YACjC,CAAC,CAAC,CAAC;SACN;QAED,IAAI,cAAc,GAAG,CAAC,CAAC;YACrB,OAAO,cAAc,GAAG,CAAC,CAAC;QAG5B,OAAO,cAAc,CAAC;IACxB,CAAC;IAED,KAAK,CAAC,OAAe,EAAE,KAAa,EAAE,GAAW,EAAE,OAA4C;QAC7F,MAAM,MAAM,GAAG,CAAC,OAAO,CAAC,OAAO,CAAC,UAAU,EAAE,KAAK,CAAC,GAAG,CAAC,CAAC;QACvD,IAAI,QAAQ,GAAG,KAAK,CAAC;QACrB,IAAI,CAAC,SAAS,CAAC,UAAU,CAAC,CAAC,IAAI,CAAC,OAAO,CAAC,SAAS,CAAC,KAAK,EAAE,MAAM,CAAC,CAAC,CAAC;QAElE,KAAK,GAAG,MAAM,CAAC;QACf,OAAO,QAAQ,GAAG,GAAG,EAAE;YACrB,KAAK,GAAG,OAAO,CAAC,OAAO,CAAC,KAAK,EAAE,QAAQ,CAAC,CAAC;YACzC,IAAI,KAAK,KAAK,CAAC,CAAC;gBACd,OAAO;YAGT,KAAK,IAAI,CAAC,CAAC;YACX,QAAQ,GAAG,OAAO,CAAC,OAAO,CAAC,KAAK,EAAE,KAAK,CAAC,CAAC;YACzC,IAAI,QAAQ,KAAK,CAAC,CAAC;gBACjB,OAAO;YAGT,MAAM,YAAY,GAAG,OAAO,CAAC,SAAS,CAAC,KAAK,EAAE,QAAQ,CAAC,CAAC;YACxD,KAAK,GAAG,QAAQ,GAAG,CAAC,CAAC;YAErB,QAAQ,GAAG,OAAO,CAAC,OAAO,CAAC,IAAI,EAAE,KAAK,CAAC,CAAC;YACxC,IAAI,QAAQ,KAAK,CAAC,CAAC;gBACjB,QAAQ,GAAG,GAAG,CAAC;iBACZ,IAAI,OAAO,CAAC,QAAQ,GAAG,CAAC,CAAC,IAAI,IAAI;gBACpC,QAAQ,GAAG,OAAO,CAAC,OAAO,CAAC,IAAI,EAAE,QAAQ,GAAG,CAAC,CAAC,CAAC;YAEjD,OAAO,CAAC,YAAY,EAAE,OAAO,CAAC,SAAS,CAAC,KAAK,EAAE,QAAQ,CAAC,CAAC,CAAC;YAC1D,QAAQ,IAAI,CAAC,CAAC;SACf;IACH,CAAC;CACF","sourcesContent":["export type MonomerEntry = {\n  mol: string,\n  type: string,\n  analogueCode: string,\n  linkages: { [link: string]: { atomNumber: number, type: string } }\n};\nexport type MonomerEntries = { [name: string]: MonomerEntry };\nexport type LinkData = { [link: string]: { atomNumber: number, type: string } };\n\n/** HELM associated sdf libraries with monomer processing*/\nexport class MonomerLibrary {\n  static libName = 'monomerLibrary';\n\n  private monomerFields: string[] = [\n    'molecule', 'MonomerType', 'MonomerNaturalAnalogCode', 'MonomerName', 'MonomerCode', 'MonomerCaps', 'BranchMonomer',\n  ];\n\n  private library: MonomerEntries = {};\n\n  private monomers: string[] = [];\n\n  constructor(sdf: string) {\n    const sdfReader = new SDFReader();\n    const data = sdfReader.getColls(sdf);\n    this.monomerFields.forEach((f) => {\n      if (!(f in data))\n        throw new Error(`Monomer library was not compiled: ${f} field is absent in provided file`);\n\n      if (data[f].length != data.molecule.length)\n        throw new Error(`Monomer library was not compiled: ${f} field is not presented for each monomer`);\n    });\n\n    for (let i = 0; i < data.molecule.length; i++) {\n      const linkData = this.getLinkData(data.molecule[i], data.MonomerCaps[i], data.MonomerName[i]);\n      const entry = {\n        mol: data.molecule[i],\n        type: 'Peptide',\n        code: data.MonomerCode[i],\n        analogueCode: data.MonomerNaturalAnalogCode[i],\n        linkages: linkData,\n      };\n\n      const name = data.MonomerCode[i] !== '.' ? data.MonomerCode[i] : data.MonomerName[i];\n      this.library[name] = entry;\n      this.monomers.push(name);\n    }\n  }\n\n  /** getting full monomer information from monomer library\n   * @param {string} name\n   * @return {MonomerEntry}\n   */\n  public getMonomerEntry(name: string): MonomerEntry {\n    if (!this.monomers.includes(name))\n      throw new Error(`Monomer library do not contain ${name} monomer`);\n\n    return this.library[name];\n  }\n\n  /** getting mol as string for monomer\n   * @param {string} name\n   * @return {string}\n   */\n  public getMonomerMol(name: string): string {\n    if (!this.monomers.includes(name))\n      throw new Error(`Monomer library do not contain ${name} monomer`);\n\n\n    const entry = this.library[name];\n    let monomerMol = entry.mol.replace(/M  RGP  .+\\n/, '');\n\n    //order matters\n    const links = Object.keys(entry.linkages);\n    for (const link of links)\n      monomerMol = monomerMol.replace('R#', entry.linkages[link].type + ' ');\n\n\n    return monomerMol;\n  }\n\n  /** getting the list of the minomers available in library*/\n  get monomerNames(): string[] {\n    return this.monomers;\n  }\n\n  static get id(): string {\n    return MonomerLibrary.libName;\n  }\n\n  private getLinkData(mol: string, caps: string, name: string): LinkData {\n    const rawData = mol.match(/M  RGP  .+/);\n    if (rawData === null)\n      throw new Error(`Monomer library was not compiled: ${name} entry has no RGP`);\n\n    const types: { [code: string]: string } = {};\n    caps.split('\\n')?.forEach((e) => {\n      types[e.match(/\\d+/)![0]] = e.match(/(?<=\\])\\w+/)![0];\n    });\n\n    const data = rawData[0].replace('M  RGP  ', '').split(/\\s+/);\n    const res: LinkData = {};\n    for (let i = 0; i < parseInt(data[0]); i++) {\n      const code = parseInt(data[2 * i + 2]);\n      let type = '';\n      switch (code) {\n      case 1:\n        type = 'N-terminal';\n        break;\n      case 2:\n        type = 'C-terminal';\n        break;\n      case 3:\n        type = 'branch';\n        break;\n      default:\n        break;\n      }\n      res[type] = {atomNumber: parseInt(data[2 * i + 1]), type: types[code]};\n    }\n\n    return res;\n  }\n}\n\n//TODO: merge with Chem version\nclass SDFReader {\n  dataColls: { [_: string]: string [] };\n\n  constructor() {\n    this.dataColls = {'molecule': []};\n  }\n\n  getColls(content: string): { [_: string]: string[] } {\n    this.read(content);\n    return this.dataColls;\n  }\n\n  read(content: string): void {\n    content = content.replaceAll('\\r', ''); //equalize old and new sdf standards\n    let startIndex = content.indexOf('$$$$', 0);\n    this.parse(content, 0, startIndex, (name: string, val: string): void => { // TODO: type\n      this.dataColls[name] = [];\n      this.dataColls[name].push(val);\n    });\n    startIndex += 5;\n    while (startIndex > -1 && startIndex < content.length)\n      startIndex = this.readNext(content, startIndex);\n  }\n\n  readNext(content: string, startIndex: number): number {\n    const nextStartIndex = content.indexOf('$$$$', startIndex);\n    if (nextStartIndex === -1) {\n      return -1;\n    } else {\n      this.parse(content, startIndex, nextStartIndex,\n        (name: string, val: string): void => {\n          this.dataColls[name].push(val);\n        });\n    }\n\n    if (nextStartIndex > -1)\n      return nextStartIndex + 5;\n\n\n    return nextStartIndex;\n  }\n\n  parse(content: string, start: number, end: number, handler: (name: string, val: string) => void): void {\n    const molEnd = +content.indexOf('M  END\\n', start) + 7;\n    let localEnd = start;\n    this.dataColls['molecule'].push(content.substring(start, molEnd));\n\n    start = molEnd;\n    while (localEnd < end) {\n      start = content.indexOf('> <', localEnd);\n      if (start === -1)\n        return;\n\n\n      start += 3;\n      localEnd = content.indexOf('>\\n', start);\n      if (localEnd === -1)\n        return;\n\n\n      const propertyName = content.substring(start, localEnd);\n      start = localEnd + 2;\n\n      localEnd = content.indexOf('\\n', start);\n      if (localEnd === -1)\n        localEnd = end;\n      else if (content[localEnd + 1] != '\\n')\n        localEnd = content.indexOf('\\n', localEnd + 1);\n\n      handler(propertyName, content.substring(start, localEnd));\n      localEnd += 2;\n    }\n  }\n}\n"]}