@datagrok-libraries/bio 5.9.10 → 5.9.12

package/index.d.ts

@@ -1,7 +1,7 @@
 import { PhylocanvasTreeNode, Newick, Utils, Shapes, TreeTypes } from '@phylocanvas/phylocanvas.gl';
 import { PhylocanvasGL } from '@phylocanvas/phylocanvas.gl';
 import { Aminoacids, AminoacidsPalettes } from './src/aminoacids';
-import { MonomerWorks } from './src/monomer-works';
+import { MonomerWorks } from './src/monomer-works/monomer-works';
 import { Nucleotides, NucleotidesPalettes } from './src/nucleotides';
 import { SeqPalette, SeqPaletteBase } from './src/seq-palettes';
 import { IMonomerLib, Monomer, NodeType, isLeaf, NodeCuttedType } from './src/types';
@@ -9,7 +9,6 @@ import { UnknownSeqPalette, UnknownSeqPalettes } from './src/unknown';
 import { DrawStyle, printLeftOrCentered } from './src/utils/cell-renderer';
 import { FastaFileHandler } from './src/utils/fasta-handler';
 import { getSplitter, splitterAsFasta, getSplitterForColumn, SplitterFunc, monomerToShort, splitterAsHelm, getStats, pickUpPalette, getPaletteByType, getAlphabetSimilarity, ALPHABET, NOTATION, TAGS, ALIGNMENT } from './src/utils/macromolecule';
-import { getMonomerLib } from './src/utils/monomer-lib';
 import { INewickHelper } from './src/utils/newick-helper';
 import { NotationConverter } from './src/utils/notation-converter';
 import { splitAlignedSequences } from './src/utils/splitter';
@@ -20,5 +19,5 @@ import { CanvasCallback, getPhylocanvasGlService, IPhylocanvasGlViewer, NodeStyl
 import { IVdRegionsViewer } from './src/viewers/vd-regions-viewer';
 import { PositionHeight, PositionInfo, PositionMonomerInfo, WebLogoViewer } from './src/viewers/web-logo-viewer';
 import { MonomerLib } from './src/monomer-works/monomer-lib';
-export { ALIGNMENT, ALPHABET, NOTATION, TAGS, NotationConverter, SplitterFunc, getStats, getAlphabetSimilarity, getSplitter, splitterAsFasta, splitterAsHelm, getSplitterForColumn, monomerToShort, splitAlignedSequences, SeqPalette, SeqPaletteBase, Aminoacids, AminoacidsPalettes, Nucleotides, NucleotidesPalettes, UnknownSeqPalettes, UnknownSeqPalette, pickUpPalette, getPaletteByType, PositionHeight, PositionInfo, PositionMonomerInfo, WebLogoViewer, UnitsHandler, DrawStyle, printLeftOrCentered, FastaFileHandler, VdRegionType, VdRegion, IVdRegionsViewer, NodeType, isLeaf, NodeCuttedType, PhylocanvasTreeNode, NodeStyleType, StylesType, IPhylocanvasGlViewer, TreeTypesNames, PhylocanvasGlServiceBase, CanvasCallback, PhylocanvasGlTask, getPhylocanvasGlService, PhylocanvasGL, Shapes, TreeTypes, Utils, Newick, INewickHelper, ITreeHelper, getTreeHelper, Monomer, IMonomerLib, getMonomerLib, MonomerWorks, MonomerLib };
+export { ALIGNMENT, ALPHABET, NOTATION, TAGS, NotationConverter, SplitterFunc, getStats, getAlphabetSimilarity, getSplitter, splitterAsFasta, splitterAsHelm, getSplitterForColumn, monomerToShort, splitAlignedSequences, SeqPalette, SeqPaletteBase, Aminoacids, AminoacidsPalettes, Nucleotides, NucleotidesPalettes, UnknownSeqPalettes, UnknownSeqPalette, pickUpPalette, getPaletteByType, PositionHeight, PositionInfo, PositionMonomerInfo, WebLogoViewer, UnitsHandler, DrawStyle, printLeftOrCentered, FastaFileHandler, VdRegionType, VdRegion, IVdRegionsViewer, NodeType, isLeaf, NodeCuttedType, PhylocanvasTreeNode, NodeStyleType, StylesType, IPhylocanvasGlViewer, TreeTypesNames, PhylocanvasGlServiceBase, CanvasCallback, PhylocanvasGlTask, getPhylocanvasGlService, PhylocanvasGL, Shapes, TreeTypes, Utils, Newick, INewickHelper, ITreeHelper, getTreeHelper, Monomer, IMonomerLib, MonomerWorks, MonomerLib };
 //# sourceMappingURL=index.d.ts.map

package/index.d.ts.map

@@ -1 +1 @@
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package/index.js

@@ -3,7 +3,7 @@ import { Newick, Utils, Shapes, TreeTypes } from '@phylocanvas/phylocanvas.gl';
 //@ts-ignore
 import { PhylocanvasGL } from '@phylocanvas/phylocanvas.gl';
 import { Aminoacids, AminoacidsPalettes } from './src/aminoacids';
-import { MonomerWorks } from './src/monomer-works';
+import { MonomerWorks } from './src/monomer-works/monomer-works';
 import { Nucleotides, NucleotidesPalettes } from './src/nucleotides';
 import { SeqPaletteBase } from './src/seq-palettes';
 import { isLeaf } from './src/types';
@@ -11,7 +11,6 @@ import { UnknownSeqPalette, UnknownSeqPalettes } from './src/unknown';
 import { DrawStyle, printLeftOrCentered } from './src/utils/cell-renderer';
 import { FastaFileHandler } from './src/utils/fasta-handler';
 import { getSplitter, splitterAsFasta, getSplitterForColumn, monomerToShort, splitterAsHelm, getStats, pickUpPalette, getPaletteByType, getAlphabetSimilarity } from './src/utils/macromolecule';
-import { getMonomerLib } from './src/utils/monomer-lib';
 import { NotationConverter } from './src/utils/notation-converter';
 import { splitAlignedSequences } from './src/utils/splitter';
 import { getTreeHelper } from './src/utils/tree-helper';
@@ -20,5 +19,5 @@ import { VdRegion, VdRegionType } from './src/vd-regions';
 import { getPhylocanvasGlService, PhylocanvasGlServiceBase, TreeTypesNames } from './src/viewers/phylocanvas-gl-viewer';
 import { PositionHeight, PositionInfo, PositionMonomerInfo, WebLogoViewer } from './src/viewers/web-logo-viewer';
 import { MonomerLib } from './src/monomer-works/monomer-lib';
-export { NotationConverter, getStats, getAlphabetSimilarity, getSplitter, splitterAsFasta, splitterAsHelm, getSplitterForColumn, monomerToShort, splitAlignedSequences, SeqPaletteBase, Aminoacids, AminoacidsPalettes, Nucleotides, NucleotidesPalettes, UnknownSeqPalettes, UnknownSeqPalette, pickUpPalette, getPaletteByType, PositionHeight, PositionInfo, PositionMonomerInfo, WebLogoViewer, UnitsHandler, DrawStyle, printLeftOrCentered, FastaFileHandler, VdRegionType, VdRegion, isLeaf, TreeTypesNames, PhylocanvasGlServiceBase, getPhylocanvasGlService, PhylocanvasGL, Shapes, TreeTypes, Utils, Newick, getTreeHelper, getMonomerLib, MonomerWorks, MonomerLib };
-//# 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
+export { NotationConverter, getStats, getAlphabetSimilarity, getSplitter, splitterAsFasta, splitterAsHelm, getSplitterForColumn, monomerToShort, splitAlignedSequences, SeqPaletteBase, Aminoacids, AminoacidsPalettes, Nucleotides, NucleotidesPalettes, UnknownSeqPalettes, UnknownSeqPalette, pickUpPalette, getPaletteByType, PositionHeight, PositionInfo, PositionMonomerInfo, WebLogoViewer, UnitsHandler, DrawStyle, printLeftOrCentered, FastaFileHandler, VdRegionType, VdRegion, isLeaf, TreeTypesNames, PhylocanvasGlServiceBase, getPhylocanvasGlService, PhylocanvasGL, Shapes, TreeTypes, Utils, Newick, getTreeHelper, MonomerWorks, MonomerLib };
+//# sourceMappingURL=data:application/json;base64,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

package/index.ts

@@ -4,7 +4,7 @@ import {PhylocanvasTreeNode, Newick, Utils, Shapes, TreeTypes} from '@phylocanva
 import {PhylocanvasGL} from '@phylocanvas/phylocanvas.gl';
 
 import {Aminoacids, AminoacidsPalettes} from './src/aminoacids';
-import {MonomerWorks} from './src/monomer-works';
+import {MonomerWorks} from './src/monomer-works/monomer-works';
 import {Nucleotides, NucleotidesPalettes} from './src/nucleotides';
 import {SeqPalette, SeqPaletteBase} from './src/seq-palettes';
 import {IMonomerLib, Monomer, NodeType, isLeaf, NodeCuttedType} from './src/types';
@@ -27,7 +27,6 @@ import {
   TAGS,
   ALIGNMENT
 } from './src/utils/macromolecule';
-import {getMonomerLib} from './src/utils/monomer-lib';
 import {INewickHelper} from './src/utils/newick-helper';
 import {NotationConverter} from './src/utils/notation-converter';
 import {splitAlignedSequences} from './src/utils/splitter';
@@ -107,7 +106,6 @@ export {
   //Monomer lib and features
   Monomer,
   IMonomerLib,
-  getMonomerLib,
   MonomerWorks,
   MonomerLib
 };

package/package.json

@@ -4,7 +4,7 @@
     "access": "public"
   },
   "friendlyName": "Datagrok bio library",
-  "version": "5.9.10",
+  "version": "5.9.12",
   "description": "",
   "dependencies": {
     "@datagrok-libraries/utils": "^1.10.1",

package/src/monomer-works/monomer-works.d.ts

@@ -0,0 +1,7 @@
+import { IMonomerLib } from '../types';
+export declare class MonomerWorks {
+    monomerLib: IMonomerLib;
+    constructor(monomerLib: IMonomerLib);
+    getCappedRotatedMonomer(monomerType: string, monomerName: string): string | null;
+}
+//# sourceMappingURL=monomer-works.d.ts.map

package/src/monomer-works/monomer-works.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"monomer-works.d.ts","sourceRoot":"","sources":["monomer-works.ts"],"names":[],"mappings":"AAIA,OAAO,EAAC,WAAW,EAAU,MAAM,UAAU,CAAC;AAI9C,qBAAa,YAAY;IACvB,UAAU,EAAE,WAAW,CAAC;gBAEZ,UAAU,EAAE,WAAW;IAK5B,uBAAuB,CAAC,WAAW,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,GAAG,MAAM,GAAG,IAAI;CAOxF"}

package/src/monomer-works/monomer-works.js

@@ -0,0 +1,13 @@
+export class MonomerWorks {
+    constructor(monomerLib) {
+        this.monomerLib = monomerLib;
+    }
+    //types according to Monomer possible
+    getCappedRotatedMonomer(monomerType, monomerName) {
+        const monomer = this.monomerLib.getMonomer(monomerType, monomerName);
+        if (monomer)
+            return monomer.molfile; //TODO cap 
+        return null;
+    }
+}
+//# sourceMappingURL=data:application/json;base64,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