@datagrok-libraries/bio 5.7.0 → 5.8.0

package/src/viewers/phylocanvas-gl-viewer.d.ts

@@ -6,6 +6,15 @@ export declare type NodeStyleType = {
 export declare type StylesType = {
     [nodeName: string]: NodeStyleType;
 };
+export declare enum TreeTypesNames {
+    Radial = "Radial",
+    /** Rectangular edges, leaves listed __vertically__ */
+    Rectangular = "Rectangular",
+    Polar = "Polar",
+    Diagonal = "Diagonal",
+    /** Rectangular edges, leaves listed __horizontally__ */
+    Orthogonal = "Orthogonal"
+}
 export interface IPhylocanvasGlViewer extends IViewer {
     get nwkDf(): DG.DataFrame;
     set nwkDf(value: DG.DataFrame);
@@ -13,4 +22,31 @@ export interface IPhylocanvasGlViewer extends IViewer {
         [propName: string]: any;
     }): void;
 }
+export declare type PhylocanvasGlTask = {
+    name: string;
+    backColor: number;
+    props: {
+        [propName: string]: any;
+    };
+    onAfterRender: CanvasCallback;
+};
+export declare type CanvasCallback = (canvas: HTMLCanvasElement) => void;
+export declare abstract class PhylocanvasGlServiceBase {
+    static noneSource: {
+        type: string;
+        data: any;
+    };
+    /** Queues PhylocanvasGL render task
+     * @param key  Specify to skip previously queued tasks with the same key
+     */
+    abstract render(args: PhylocanvasGlTask, key?: keyof any): void;
+    /** Default implementation of rendering tree on grid cell
+     * @param gCtx    Context to draw on grid
+     * @param bd      Bound rect to clip drawing on task moment
+     * @param gCell   Grid cell to draw
+     * @param canvas  Image of the tree rendered
+     */
+    abstract renderOnGridCell(gCtx: CanvasRenderingContext2D, bd: DG.Rect, gCell: DG.GridCell, canvas: CanvasImageSource): void;
+}
+export declare function getPhylocanvasGlService(): Promise<PhylocanvasGlServiceBase>;
 //# sourceMappingURL=phylocanvas-gl-viewer.d.ts.map

package/src/viewers/phylocanvas-gl-viewer.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"phylocanvas-gl-viewer.d.ts","sourceRoot":"","sources":["phylocanvas-gl-viewer.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAEtC,OAAO,EAAC,OAAO,EAAC,MAAM,UAAU,CAAC;AAGjC,oBAAY,aAAa,GAAG;IAAE,CAAC,QAAQ,EAAE,MAAM,GAAG,GAAG,CAAA;CAAE,CAAC;AACxD,oBAAY,UAAU,GAAG;IAAE,CAAC,QAAQ,EAAE,MAAM,GAAG,aAAa,CAAA;CAAE,CAAC;AAE/D,oBAAY,cAAc;IACxB,MAAM,WAAW;IACjB,sDAAsD;IACtD,WAAW,gBAAgB;IAC3B,KAAK,UAAU;IACf,QAAQ,aAAa;IACrB,wDAAwD;IACxD,UAAU,eAAe;CAC1B;AAED,MAAM,WAAW,oBAAqB,SAAQ,OAAO;IACnD,IAAI,KAAK,IAAI,EAAE,CAAC,SAAS,CAAC;IAE1B,IAAI,KAAK,CAAC,KAAK,EAAE,EAAE,CAAC,SAAS,EAAE;IAE/B,QAAQ,CAAC,OAAO,EAAE;QAAE,CAAC,QAAQ,EAAE,MAAM,GAAG,GAAG,CAAA;KAAE,GAAG,IAAI,CAAC;CACtD;AAMD,oBAAY,iBAAiB,GAAG;IAAE,IAAI,EAAE,MAAM,CAAC;IAAC,SAAS,EAAE,MAAM,CAAC;IAAC,KAAK,EAAE;QAAE,CAAC,QAAQ,EAAE,MAAM,GAAG,GAAG,CAAA;KAAE,CAAC;IAAC,aAAa,EAAE,cAAc,CAAA;CAAE,CAAC;AAEvI,oBAAY,cAAc,GAAG,CAAC,MAAM,EAAE,iBAAiB,KAAK,IAAI,CAAC;AAEjE,8BAAsB,wBAAwB;IAC5C,OAAc,UAAU,EAAE;QAAE,IAAI,EAAE,MAAM,CAAC;QAAC,IAAI,EAAE,GAAG,CAAA;KAAE,CAGnD;IAEF;;OAEG;IACH,QAAQ,CAAC,MAAM,CAAC,IAAI,EAAE,iBAAiB,EAAE,GAAG,CAAC,EAAE,MAAM,GAAG,GAAG,IAAI;IAE/D;;;;;OAKG;IACH,QAAQ,CAAC,gBAAgB,CACvB,IAAI,EAAE,wBAAwB,EAAE,EAAE,EAAE,EAAE,CAAC,IAAI,EAAE,KAAK,EAAE,EAAE,CAAC,QAAQ,EAAE,MAAM,EAAE,iBAAiB,GAAG,IAAI;CACpG;AAGD,wBAAsB,uBAAuB,IAAI,OAAO,CAAC,wBAAwB,CAAC,CAOjF"}

package/src/viewers/phylocanvas-gl-viewer.js

@@ -1,2 +1,36 @@
-export {};
-//# sourceMappingURL=data:application/json;base64,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
+var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
+    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
+    return new (P || (P = Promise))(function (resolve, reject) {
+        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
+        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
+        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
+        step((generator = generator.apply(thisArg, _arguments || [])).next());
+    });
+};
+import * as DG from 'datagrok-api/dg';
+export var TreeTypesNames;
+(function (TreeTypesNames) {
+    TreeTypesNames["Radial"] = "Radial";
+    /** Rectangular edges, leaves listed __vertically__ */
+    TreeTypesNames["Rectangular"] = "Rectangular";
+    TreeTypesNames["Polar"] = "Polar";
+    TreeTypesNames["Diagonal"] = "Diagonal";
+    /** Rectangular edges, leaves listed __horizontally__ */
+    TreeTypesNames["Orthogonal"] = "Orthogonal";
+})(TreeTypesNames || (TreeTypesNames = {}));
+export class PhylocanvasGlServiceBase {
+}
+PhylocanvasGlServiceBase.noneSource = {
+    type: 'biojs',
+    data: { name: 'none', branch_length: 1, children: [] }
+};
+export function getPhylocanvasGlService() {
+    return __awaiter(this, void 0, void 0, function* () {
+        const funcList = DG.Func.find({ package: 'PhyloTreeViewer', name: 'getPhylocanvasGlService' });
+        if (funcList.length === 0)
+            throw new Error('Package "PhyloTreeViewer"" must be installed for PhylocanvasGL services.');
+        const svc = (yield funcList[0].prepare().call()).getOutputParamValue();
+        return svc;
+    });
+}
+//# sourceMappingURL=data:application/json;base64,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