npm - @datagrok-libraries/bio - Versions diffs - 5.52.0 → 5.52.1 - Mend

@datagrok-libraries/bio 5.52.0 → 5.52.1

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Files changed (9) hide show

package/package.json CHANGED Viewed

@@ -8,7 +8,7 @@
     "access": "public"
   },
   "friendlyName": "Datagrok bio library",
-  "version": "5.52.0",
+  "version": "5.52.1",
   "description": "Bio utilities, types supporting Macromolecule, Molecule3D data",
   "dependencies": {
     "@datagrok-libraries/chem-meta": "^1.2.7",

package/src/utils/cell-renderer-monomer-placer.d.ts CHANGED Viewed

@@ -10,7 +10,10 @@ type MonomerPlacerProps = {
     fontCharWidth: number;
 };
 export declare const undefinedColor = "rgb(100,100,100)";
-export declare function hitBounds(bounds: number[], x: number): number | null;
+export declare const shiftedLeftPaddingText = "...";
+/** Be ware, this can return -1 meaning that hovering/clicking happened on the three dots
+ * and not on the monomer itself */
+export declare function hitBounds(bounds: number[], x: number, positionShiftPixels?: number): number | null;
 export declare class MonomerPlacer extends CellRendererBackBase<string> {
     monomerLengthLimit: number;
     private readonly propsProvider;
@@ -46,11 +49,12 @@ export declare class MonomerPlacer extends CellRendererBackBase<string> {
     private getCellMonomerLengthsForSeqValue;
     private getCellMonomerLengthsForSeqMsa;
     /** Returns seq position for pointer x */
-    getPosition(rowIdx: number, x: number, width: number): number | null;
+    getPosition(rowIdx: number, x: number, width: number, positionShiftPadding?: number): number | null;
     setMonomerLengthLimit(value: number): void;
     setSeparatorWidth(value: number): void;
     private padding;
     get positionShift(): number;
+    private _leftThreeDotsPadding;
     render(g: CanvasRenderingContext2D, x: number, y: number, w: number, h: number, gridCell: DG.GridCell, _cellStyle: DG.GridCellStyle): void;
     onMouseMove(gridCell: DG.GridCell, e: MouseEvent): void;
 }

package/src/utils/cell-renderer-monomer-placer.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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package/src/utils/cell-renderer-monomer-placer.js CHANGED Viewed

@@ -12,7 +12,13 @@ import { HelmTypes } from '../helm/consts';
 import { execMonomerHoverLinks } from '../monomer-works/monomer-hover';
 import * as operators from 'rxjs/operators';
 export const undefinedColor = 'rgb(100,100,100)';
-export function hitBounds(bounds, x) {
+export const shiftedLeftPaddingText = '...';
+/** Be ware, this can return -1 meaning that hovering/clicking happened on the three dots
+ * and not on the monomer itself */
+export function hitBounds(bounds, x, positionShiftPixels) {
+    if ((positionShiftPixels ?? 0) > 0 && x < (bounds[0] ?? 0) + positionShiftPixels)
+        return -1;
+    x -= positionShiftPixels ?? 0;
     let iterationCount = 100;
     let leftI = 0;
     let rightI = bounds.length - 1;
@@ -47,6 +53,7 @@ export class MonomerPlacer extends CellRendererBackBase {
         this._monomerStructureMap = {}; // caches the atomic structures of monomers
         this.sysMonomerLib = null;
         this.padding = 5;
+        this._leftThreeDotsPadding = 0;
         this.props = this.propsProvider();
         this._processedRows = DG.BitSet.create(this.tableCol.length);
         if (this.gridCol) {
@@ -137,7 +144,7 @@ export class MonomerPlacer extends CellRendererBackBase {
     }
     getSummedMonomerLengths(res) {
         const resSum = new Array(res.length + 1);
-        resSum[0] = 5; // padding
+        resSum[0] = this.padding; // padding
         for (let pos = 1; pos < resSum.length; pos++)
             resSum[pos] = resSum[pos - 1] + res[pos - 1];
         // due to implementation specifics and performance, resSum can have NaN s at the end for stuff that is not visible
@@ -252,13 +259,13 @@ export class MonomerPlacer extends CellRendererBackBase {
         return res; // first (and single) row of data
     }
     /** Returns seq position for pointer x */
-    getPosition(rowIdx, x, width) {
+    getPosition(rowIdx, x, width, positionShiftPadding) {
         const [_monomerMaxLengthList, monomerMaxLengthSumList] = this.getCellMonomerLengths(rowIdx, width);
         const sh = this.seqHelper.getSeqHandler(this.tableCol);
         const seqSS = sh.getSplitted(rowIdx);
         if (seqSS.length === 0)
             return null;
-        return hitBounds(monomerMaxLengthSumList, x);
+        return hitBounds(monomerMaxLengthSumList, x, positionShiftPadding);
     }
     setMonomerLengthLimit(value) {
         if (this.monomerLengthLimit != value) {
@@ -273,7 +280,8 @@ export class MonomerPlacer extends CellRendererBackBase {
         }
     }
     get positionShift() {
-        return Number.parseInt(this.tableCol?.tags[bioTAGS.positionShift] ?? '0') ?? 0;
+        const parsed = Number.parseInt(this.tableCol?.tags[bioTAGS.positionShift] ?? '0') ?? 0;
+        return isNaN(parsed) ? 0 : Math.max(parsed, 0);
     }
     render(g, x, y, w, h, gridCell, _cellStyle) {
         // for cases when we render it on somewhere other than grid, gridRow might be null or incorrect (set to 0).
@@ -339,7 +347,7 @@ export class MonomerPlacer extends CellRendererBackBase {
                 const splitterFunc = sh.getSplitter(splitLimit);
                 const seqSS = splitterFunc(((tempReferenceSequence != null) && (tempReferenceSequence != '')) ?
                     tempReferenceSequence : tempCurrentWord ?? '');
-                return wu.count(0).take(seqSS.length).map((posIdx) => seqSS.getOriginal(posIdx)).toArray();
+                return wu.count(0).take(seqSS.length).slice(positionShift).map((posIdx) => seqSS.getOriginal(posIdx)).toArray();
             })();
             const subParts = isRenderedOnGrid ? sh.getSplitted(rowIdx) : sh.splitter(value);
             if (!isRenderedOnGrid)
@@ -347,6 +355,8 @@ export class MonomerPlacer extends CellRendererBackBase {
             let drawStyle = DrawStyle.classic;
             if (aligned && aligned.includes('MSA') && units == NOTATION.SEPARATOR)
                 drawStyle = DrawStyle.MSA;
+            // if the sequence is rendered in shifted mode, we will also render three dots at start, indicating the shift
+            this._leftThreeDotsPadding = positionShift > 0 ? g.measureText(shiftedLeftPaddingText).width : 0;
             const visibleSeqLength = Math.min(subParts.length, splitLimit);
             for (let posIdx = positionShift; posIdx < visibleSeqLength; ++posIdx) {
                 const om = posIdx < subParts.length ? subParts.getOriginal(posIdx) : sh.defaultGapOriginal;
@@ -367,10 +377,19 @@ export class MonomerPlacer extends CellRendererBackBase {
                     referenceSequence: referenceSequence, maxLengthOfMonomer: maxLengthOfMonomer,
                     monomerTextSizeMap: this._monomerLengthMap, logger: this.logger
                 };
-                printLeftOrCentered(g, om, x + this.padding, y, w, h, opts);
+                printLeftOrCentered(g, om, x + this.padding + this._leftThreeDotsPadding, y, w, h, opts);
                 if (minDistanceRenderer > w)
                     break;
             }
+            if (positionShift > 0) {
+                const opts = {
+                    color: undefinedColor, pivot: 0, left: true, transparencyRate: 1.0, separator: separator, last: false,
+                    drawStyle: drawStyle, maxWord: maxLengthWordsSum, wordIdx: 0, gridCell: gridCell,
+                    maxLengthOfMonomer: maxLengthOfMonomer,
+                    monomerTextSizeMap: this._monomerLengthMap, logger: this.logger
+                };
+                printLeftOrCentered(g, shiftedLeftPaddingText, x + this.padding, y, w, h, opts);
+            }
         }
         catch (err) {
             const [errMsg, errStack] = errInfo(err);
@@ -388,6 +407,7 @@ export class MonomerPlacer extends CellRendererBackBase {
             return;
         // if (gridCell.cell.column.getTag(bioTAGS.aligned) !== ALIGNMENT.SEQ_MSA)
         //   return;
+        const positionShift = this.positionShift;
         const gridCellBounds = gridCell.bounds;
         // const value: any = gridCell.cell.value;
         //
@@ -397,16 +417,17 @@ export class MonomerPlacer extends CellRendererBackBase {
         //   maxLengthWordsSum[posI] = maxLengthWordsSum[posI - 1] + maxLengthWords[posI];
         // const maxIndex = maxLengthWords.length;
         const argsX = e.offsetX - gridCell.gridColumn.left + (gridCell.gridColumn.left - gridCellBounds.x);
-        const left = this.getPosition(gridCell.tableRowIndex, argsX, gridCellBounds.width);
+        const leftPadding = positionShift > 0 && (this._leftThreeDotsPadding ?? 0) > 0 ? this._leftThreeDotsPadding : 0;
+        const left = this.getPosition(gridCell.tableRowIndex, argsX, gridCellBounds.width, leftPadding);
         this.logger.debug(`${logPrefix}, start, argsX: ${argsX}, left: ${left}`);
         const sh = this.seqHelper.getSeqHandler(this.tableCol);
         const seqSS = sh.getSplitted(gridCell.tableRowIndex);
-        if (left !== null && left + this.positionShift < seqSS.length) {
+        if (left !== null && left >= 0 && left + positionShift < seqSS.length) {
             const alphabet = sh.alphabet ?? ALPHABET.UN;
             const seqMonomer = {
                 position: left,
                 biotype: alphabet === ALPHABET.RNA || alphabet === ALPHABET.DNA ? HelmTypes.NUCLEOTIDE : HelmTypes.AA,
-                symbol: seqSS.getCanonical(left + this.positionShift),
+                symbol: seqSS.getCanonical(left + positionShift),
             };
             const tooltipElements = [];
             let monomerDiv = this._monomerStructureMap[seqMonomer.symbol];
@@ -422,8 +443,10 @@ export class MonomerPlacer extends CellRendererBackBase {
             execMonomerHoverLinks(gridCell, seqMonomer);
         }
         else {
-            //
-            ui.tooltip.hide();
+            if (left === -1)
+                ui.tooltip.show(ui.divText(`${Math.min(positionShift, seqSS.length)} hidden monomers`), e.x + 16, e.y + 16);
+            else
+                ui.tooltip.hide();
             execMonomerHoverLinks(gridCell, null);
         }
     }

package/src/utils/cell-renderer-monomer-placer.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/src/utils/sequence-position-scroller.d.ts ADDED Viewed

@@ -0,0 +1,96 @@
+/**
+ * MSAHeader.ts - Interactive MSA Header Component
+ * This module provides functionality for an interactive MSA (Multiple Sequence Alignment) header
+ * with position markers, slider navigation, and position selection.
+ */
+interface WindowRange {
+    start: number;
+    end: number;
+}
+interface MSAHeaderOptions {
+    canvas: HTMLCanvasElement;
+    totalPositions?: number;
+    positionWidth?: number;
+    headerHeight?: number;
+    sliderHeight?: number;
+    currentPosition?: number;
+    windowStartPosition?: number;
+    cellBackground?: boolean;
+    sliderColor?: string;
+    x?: number;
+    y?: number;
+    width?: number;
+    height?: number;
+    onPositionChange?: (position: number, range: WindowRange) => void;
+}
+export declare class MSAScrollingHeader {
+    private config;
+    private state;
+    private canvas;
+    private ctx;
+    /**
+     * Constructor for the MSA Header
+     * @param {MSAHeaderOptions} options - Configuration options
+     */
+    constructor(options: MSAHeaderOptions);
+    /**
+     * Initialize the component
+     */
+    private init;
+    draw(x: number, y: number, w: number, h: number, currentPos: number, scrollerStart: number): void;
+    getCoords(e: MouseEvent): {
+        x: number;
+        y: number;
+    };
+    isInHeaderArea(e: MouseEvent): boolean;
+    isInSliderArea(e: MouseEvent): boolean;
+    get sliderWidth(): number;
+    isInSliderDraggableArea(e: MouseEvent): boolean;
+    /**
+     * Handle mouse down (start dragging)
+     * @param {MouseEvent} e - Mouse event
+     */
+    private handleMouseDown;
+    private handleMouseWheel;
+    /**
+     * Handle mouse move (dragging)
+     * @param {MouseEvent} e - Mouse event
+     */
+    private handleMouseMove;
+    /**
+     * Handle mouse up (end dragging)
+     */
+    private handleMouseUp;
+    /**
+     * Handle slider drag
+     * @param {number} x - X position of mouse
+     */
+    private handleSliderDrag;
+    /**
+     * Handle click on positions
+     * @param {MouseEvent} e - Mouse event
+     */
+    private handleClick;
+    /**
+     * Get the current window range
+     * @return {WindowRange} Object with start and end properties
+     */
+    getWindowRange(): WindowRange;
+    /**
+     * Update configuration
+     * @param {MSAHeaderOptions} newConfig - New configuration options
+     */
+    updateConfig(newConfig: Partial<MSAHeaderOptions>): void;
+    /**
+     * Get current position
+     * @return {number} Current position
+     */
+    getCurrentPosition(): number;
+    /**
+     * Set current position
+     * @param {number} position - New position
+     */
+    setCurrentPosition(position: number): void;
+}
+export {};
+//# sourceMappingURL=sequence-position-scroller.d.ts.map

package/src/utils/sequence-position-scroller.d.ts.map ADDED Viewed

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package/src/utils/sequence-position-scroller.js ADDED Viewed

@@ -0,0 +1,310 @@
+/* eslint-disable max-len */
+/**
+ * MSAHeader.ts - Interactive MSA Header Component
+ * This module provides functionality for an interactive MSA (Multiple Sequence Alignment) header
+ * with position markers, slider navigation, and position selection.
+ */
+export class MSAScrollingHeader {
+    /**
+     * Constructor for the MSA Header
+     * @param {MSAHeaderOptions} options - Configuration options
+     */
+    constructor(options) {
+        this.canvas = null;
+        this.ctx = null;
+        // Default configuration with required fields
+        this.config = {
+            x: options.x || 0,
+            y: options.y || 0,
+            width: options.width || 400,
+            height: options.height || 60,
+            windowStartPosition: options.windowStartPosition || 1,
+            positionWidth: options.positionWidth || 15,
+            totalPositions: options.totalPositions || 5000,
+            headerHeight: options.headerHeight || 50,
+            sliderHeight: options.sliderHeight || 8,
+            currentPosition: options.currentPosition || 1,
+            cellBackground: options.cellBackground !== undefined ? options.cellBackground : true,
+            sliderColor: options.sliderColor || 'rgba(220, 220, 220, 0.4)',
+            onPositionChange: options.onPositionChange || ((_, __) => { }),
+            ...options // Override defaults with any provided options
+        };
+        // Internal state
+        this.state = {
+            isDragging: false,
+            dragStartX: 0
+        };
+        this.init();
+    }
+    /**
+     * Initialize the component
+     */
+    init() {
+        // Get canvas and context
+        this.canvas = this.config.canvas;
+        if (!this.canvas) {
+            console.error(`canvas not found.`);
+            return;
+        }
+        const context = this.canvas.getContext('2d');
+        if (!context) {
+            console.error('Failed to get 2D context from canvas');
+            return;
+        }
+        this.ctx = context;
+        // Add event listeners
+        this.canvas.addEventListener('mousedown', this.handleMouseDown.bind(this));
+        this.canvas.addEventListener('mousemove', this.handleMouseMove.bind(this));
+        this.canvas.addEventListener('mouseup', this.handleMouseUp.bind(this));
+        this.canvas.addEventListener('mouseleave', this.handleMouseUp.bind(this));
+        this.canvas.addEventListener('click', this.handleClick.bind(this));
+    }
+    draw(x, y, w, h, currentPos, scrollerStart) {
+        if (!this.ctx || !this.canvas)
+            return;
+        if (this.config.currentPosition != currentPos || this.config.windowStartPosition != scrollerStart || this.config.x != x || this.config.y != y || this.config.width != w || this.config.height != h) {
+            this.updateConfig({ x, y, width: w, height: h, currentPosition: currentPos, windowStartPosition: scrollerStart });
+            return;
+        }
+        this.ctx.save();
+        // Clear canvas
+        this.ctx.clearRect(x, y, w, h);
+        this.ctx.translate(x, y);
+        this.ctx.rect(0, 0, w, h);
+        this.ctx.clip();
+        // Calculate dimensions
+        const canvasWidth = w;
+        const canvasHeight = h;
+        const topPadding = 5;
+        const posIndexTop = topPadding;
+        const sliderTop = this.config.headerHeight - this.config.sliderHeight;
+        // Draw the full sequence slider bar (very subtle gray bar)
+        this.ctx.fillStyle = this.config.sliderColor;
+        this.ctx.fillRect(0, sliderTop, canvasWidth, this.config.sliderHeight);
+        const visiblePositionsN = Math.floor(this.config.width / this.config.positionWidth);
+        const windowStart = Math.max(1, this.config.windowStartPosition);
+        // Calculate slider position on the bar
+        const totalSliderRange = this.config.totalPositions - visiblePositionsN;
+        const sliderStartPX = totalSliderRange <= 0 ? 0 :
+            windowStart / (this.config.totalPositions) * canvasWidth;
+        const sliderLengthPX = totalSliderRange <= 0 ? canvasWidth :
+            this.sliderWidth;
+        // Draw slider window (darker rectangle)
+        this.ctx.fillStyle = 'rgba(150, 150, 150, 0.5)';
+        this.ctx.fillRect(sliderStartPX, sliderTop, sliderLengthPX, this.config.sliderHeight);
+        // Draw position marks and indices
+        for (let i = 0; i < visiblePositionsN; i++) {
+            const position = windowStart + i;
+            if (position > this.config.totalPositions)
+                break;
+            const x = i * this.config.positionWidth;
+            const cellWidth = this.config.positionWidth;
+            const cellCenterX = x + cellWidth / 2;
+            // Draw cell background for monospace appearance
+            if (this.config.cellBackground) {
+                // Very light alternating cell background
+                this.ctx.fillStyle = i % 2 === 0 ? 'rgba(248, 248, 248, 0.3)' : 'rgba(242, 242, 242, 0.2)';
+                this.ctx.fillRect(x, posIndexTop, cellWidth, Math.min(this.config.headerHeight - topPadding, canvasHeight - posIndexTop) - this.config.sliderHeight);
+                // Cell borders - very light vertical lines
+                this.ctx.strokeStyle = 'rgba(220, 220, 220, 0.7)';
+                this.ctx.beginPath();
+                this.ctx.moveTo(x, posIndexTop);
+                this.ctx.lineTo(x, Math.min(this.config.headerHeight, canvasHeight) - this.config.sliderHeight);
+                this.ctx.stroke();
+            }
+            // Draw position dot for every position - centered in cell
+            this.ctx.fillStyle = '#999999';
+            this.ctx.beginPath();
+            this.ctx.arc(cellCenterX, posIndexTop * 2, 1, 0, Math.PI * 2);
+            this.ctx.fill();
+            // Draw position number for every 10th position
+            if (position % 10 === 0) {
+                this.ctx.fillStyle = '#333333';
+                this.ctx.font = '10px monospace';
+                this.ctx.textAlign = 'center';
+                this.ctx.textBaseline = 'middle';
+                this.ctx.fillText(position.toString(), cellCenterX, posIndexTop * 4);
+            }
+            // Highlight current selected position with square marker
+            // if current is outside the range, draw it at the end
+            if (position === this.config.currentPosition) {
+                // Draw square indicator
+                this.ctx.fillStyle = '#50A9C5';
+                this.ctx.fillRect(x, 0, cellWidth, sliderTop);
+            }
+        }
+        this.ctx.restore();
+    }
+    getCoords(e) {
+        const rect = this.canvas.getBoundingClientRect();
+        const x = e.clientX - rect.left - this.config.x;
+        const y = e.clientY - rect.top - this.config.y;
+        return { x, y };
+    }
+    isInHeaderArea(e) {
+        const { x, y } = this.getCoords(e);
+        return x >= 0 && x <= this.config.width && y >= 0 && y <= this.config.headerHeight;
+    }
+    isInSliderArea(e) {
+        const { x, y } = this.getCoords(e);
+        const sliderTop = this.config.headerHeight - this.config.sliderHeight;
+        return y > sliderTop && y < sliderTop + this.config.sliderHeight;
+    }
+    get sliderWidth() {
+        const pseudoPositionWidth = this.config.width / this.config.totalPositions;
+        const w = pseudoPositionWidth * (this.config.width / this.config.positionWidth);
+        return Math.max(w, 15);
+    }
+    isInSliderDraggableArea(e) {
+        const { x, y } = this.getCoords(e);
+        const sliderTop = this.config.headerHeight - this.config.sliderHeight;
+        const startSeqX = this.config.windowStartPosition;
+        const pseudoPositionWidth = this.config.width / this.config.totalPositions;
+        const startSliderXPX = (startSeqX - 1) * pseudoPositionWidth;
+        const endSliderXPX = startSliderXPX + this.sliderWidth;
+        return y > sliderTop && y < sliderTop + this.config.sliderHeight && x >= startSliderXPX && x < endSliderXPX;
+    }
+    /**
+     * Handle mouse down (start dragging)
+     * @param {MouseEvent} e - Mouse event
+     */
+    handleMouseDown(e) {
+        if (!this.canvas)
+            return;
+        const { x } = this.getCoords(e);
+        if (this.isInSliderDraggableArea(e)) {
+            this.state.isDragging = true;
+            this.state.dragStartX = x;
+            this.handleSliderDrag(x);
+            e.preventDefault();
+            e.stopPropagation();
+            e.stopImmediatePropagation();
+        }
+    }
+    handleMouseWheel(e) {
+        if (!this.canvas)
+            return;
+        if (this.isInHeaderArea(e)) {
+            e.preventDefault();
+            e.stopPropagation();
+            e.stopImmediatePropagation();
+            const delta = Math.sign(e.deltaY);
+            const newStartPosition = this.config.windowStartPosition + delta;
+            this.config.windowStartPosition = Math.max(1, Math.min(this.config.totalPositions - Math.floor(this.config.width / this.config.positionWidth), newStartPosition));
+            // Call callback if defined
+            if (typeof this.config.onPositionChange === 'function')
+                this.config.onPositionChange(this.config.currentPosition, this.getWindowRange());
+        }
+    }
+    /**
+     * Handle mouse move (dragging)
+     * @param {MouseEvent} e - Mouse event
+     */
+    handleMouseMove(e) {
+        if (!this.state.isDragging || !this.canvas)
+            return;
+        const rect = this.canvas.getBoundingClientRect();
+        const x = e.clientX - rect.left - this.config.x;
+        this.handleSliderDrag(x);
+        e.preventDefault();
+        e.stopPropagation();
+        e.stopImmediatePropagation();
+    }
+    /**
+     * Handle mouse up (end dragging)
+     */
+    handleMouseUp() {
+        this.state.isDragging = false;
+    }
+    /**
+     * Handle slider drag
+     * @param {number} x - X position of mouse
+     */
+    handleSliderDrag(x) {
+        if (!this.canvas)
+            return;
+        // Calculate the position based on the drag position
+        const canvasWidth = this.config.width;
+        const dragAmmount = x - this.state.dragStartX;
+        const pseudoPositionToPixelRatio = canvasWidth / this.config.totalPositions;
+        const fittedPositions = Math.ceil(canvasWidth / this.config.positionWidth);
+        const newStartPosition = Math.round(this.config.windowStartPosition + dragAmmount / pseudoPositionToPixelRatio);
+        this.config.windowStartPosition = Math.max(1, Math.min(this.config.totalPositions - fittedPositions, newStartPosition));
+        // Call callback if defined
+        if (typeof this.config.onPositionChange === 'function')
+            this.config.onPositionChange(this.config.currentPosition, this.getWindowRange());
+        this.state.dragStartX = x;
+    }
+    /**
+     * Handle click on positions
+     * @param {MouseEvent} e - Mouse event
+     */
+    handleClick(_e) {
+        // if (!this.canvas) return;
+        // const rect = this.canvas.getBoundingClientRect();
+        // const x = e.clientX - rect.left;
+        // const y = e.clientY - rect.top;
+        // const sliderTop = 10;
+        // const posIndexTop = sliderTop + this.config.sliderHeight + 5;
+        // // Process clicks in position indicator area (not in slider area)
+        // if (y > posIndexTop) {
+        //   // Calculate column clicked
+        //   const columnIndex = Math.floor(x / this.config.columnWidth);
+        //   // Calculate the actual position in the sequence
+        //   const halfVisible = Math.floor(this.config.visibleWidth / 2);
+        //   const windowStart = Math.max(1, this.config.currentPosition - halfVisible);
+        //   const windowEnd = Math.min(this.config.totalPositions, windowStart + this.config.visibleWidth - 1);
+        //   const adjustedWindowStart = Math.max(1, windowEnd - this.config.visibleWidth + 1);
+        //   const clickedPosition = adjustedWindowStart + columnIndex;
+        //   // Update current position if valid
+        //   if (clickedPosition >= 1 && clickedPosition <= this.config.totalPositions) {
+        //     this.config.currentPosition = clickedPosition;
+        //     // Call callback if defined
+        //     if (typeof this.config.onPositionChange === 'function')
+        //       this.config.onPositionChange(this.config.currentPosition, this.getWindowRange());
+        //   }
+        // }
+    }
+    /**
+     * Get the current window range
+     * @return {WindowRange} Object with start and end properties
+     */
+    getWindowRange() {
+        return {
+            start: this.config.windowStartPosition,
+            end: Math.min(this.config.totalPositions, this.config.windowStartPosition + Math.floor(this.config.width / this.config.positionWidth))
+        };
+    }
+    /**
+     * Update configuration
+     * @param {MSAHeaderOptions} newConfig - New configuration options
+     */
+    updateConfig(newConfig) {
+        // Update config with new values
+        Object.assign(this.config, newConfig);
+        // Ensure current position is still valid
+        this.config.currentPosition = Math.min(this.config.currentPosition, this.config.totalPositions);
+        // Call callback if defined
+        if (typeof this.config.onPositionChange === 'function')
+            this.config.onPositionChange(this.config.currentPosition, this.getWindowRange());
+    }
+    /**
+     * Get current position
+     * @return {number} Current position
+     */
+    getCurrentPosition() {
+        return this.config.currentPosition;
+    }
+    /**
+     * Set current position
+     * @param {number} position - New position
+     */
+    setCurrentPosition(position) {
+        // Clamp to valid range
+        this.config.currentPosition = Math.max(1, Math.min(this.config.totalPositions, position));
+        // Call callback if defined
+        if (typeof this.config.onPositionChange === 'function')
+            this.config.onPositionChange(this.config.currentPosition, this.getWindowRange());
+    }
+}
+//# sourceMappingURL=sequence-position-scroller.js.map

package/src/utils/sequence-position-scroller.js.map ADDED Viewed

@@ -0,0 +1 @@

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