@datagrok-libraries/bio 5.45.1 → 5.45.2

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Files changed (7) hide show
  1. package/CHANGELOG.md +7 -0
  2. package/package.json +2 -2
  3. package/src/utils/macromolecule/seq-handler.d.ts +1 -0
  4. package/src/utils/macromolecule/seq-handler.d.ts.map +1 -1
  5. package/src/utils/seq-helper.d.ts +3 -0
  6. package/src/utils/seq-helper.d.ts.map +1 -1
  7. package/src/utils/seq-helper.js.map +1 -1
package/CHANGELOG.md CHANGED
@@ -1,5 +1,12 @@
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  # bio changelog
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+ ## 5.45.2 (2024-10-11)
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+
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+ ### Bug fixes
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+
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+ * Fix moving setUnits methods to ISeqHelper
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+ * Fix dependencies version
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+
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  ## 5.45.1 (2024-10-11)
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  ### Bug fixes
package/package.json CHANGED
@@ -8,7 +8,7 @@
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  "access": "public"
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  },
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  "friendlyName": "Datagrok bio library",
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- "version": "5.45.1",
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+ "version": "5.45.2",
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  "description": "Bio utilities, types supporting Macromolecule, Molecule3D data",
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  "dependencies": {
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  "@datagrok-libraries/chem-meta": "^1.2.7",
@@ -37,7 +37,7 @@
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  "@typescript-eslint/eslint-plugin": "^8.8.1",
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  "@typescript-eslint/parser": "^8.8.1",
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  "datagrok-tools": "latest",
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- "eslint": "^9.12.0",
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+ "eslint": "8.57.1",
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  "eslint-config-google": "^0.14.0",
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  "eslint-plugin-deprecation": "^3.0.0",
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  "ts-loader": "^9.5.1",
package/src/utils/macromolecule/seq-handler.d.ts CHANGED
@@ -12,6 +12,7 @@ export declare const SeqTemps: {
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  export type ConvertFunc = (src: string) => string;
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  export type JoinerFunc = (src: ISeqSplitted) => string;
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  export interface ISeqHandler {
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+ get column(): DG.Column<string>;
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  get alphabet(): string;
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  get notation(): NOTATION;
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  get separator(): string | undefined;
package/src/utils/macromolecule/seq-handler.d.ts.map CHANGED
@@ -1 +1 @@
1
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1
+ {"version":3,"file":"seq-handler.d.ts","sourceRoot":"","sources":["seq-handler.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAEtC,OAAO,EAAC,wBAAwB,EAAC,MAAM,6DAA6D,CAAC;AAErG,OAAO,EAAC,YAAY,EAAE,WAAW,EAAC,MAAM,SAAS,CAAC;AAClD,OAAO,EAAC,QAAQ,EAAC,MAAM,UAAU,CAAC;AAClC,OAAO,EAAC,QAAQ,EAAC,MAAM,kBAAkB,CAAC;AAC1C,OAAO,EAAC,oBAAoB,EAAC,MAAM,4BAA4B,CAAC;AAEhE,eAAO,MAAM,QAAQ;IACnB,sDAAsD;;;CAGrD,CAAC;AACJ,MAAM,MAAM,WAAW,GAAG,CAAC,GAAG,EAAE,MAAM,KAAK,MAAM,CAAC;AAClD,MAAM,MAAM,UAAU,GAAG,CAAC,GAAG,EAAE,YAAY,KAAK,MAAM,CAAC;AAEvD,MAAM,WAAW,WAAW;IAC1B,IAAI,MAAM,IAAI,EAAE,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC;IAEhC,IAAI,QAAQ,IAAI,MAAM,CAAC;IACvB,IAAI,QAAQ,IAAI,QAAQ,CAAC;IACzB,IAAI,SAAS,IAAI,MAAM,GAAG,SAAS,CAAC;IAEpC,IAAI,OAAO,IAAI,MAAM,CAAC;IACtB,IAAI,KAAK,IAAI,MAAM,CAAC;IACpB,IAAI,cAAc,IAAI,QAAQ,CAAC;IAC/B,IAAI,SAAS,IAAI,MAAM,CAAC;IACxB,IAAI,MAAM,IAAI,MAAM,CAAC;IACrB,IAAI,kBAAkB,IAAI,MAAM,CAAC;IACjC,IAAI,KAAK,IAAI,WAAW,CAAC;IACzB,IAAI,MAAM,IAAI,UAAU,CAAC;IAEzB,IAAI,OAAO,IAAI,MAAM,EAAE,CAAC;IAExB,OAAO,IAAI,OAAO,CAAC;IACnB,KAAK,IAAI,OAAO,CAAC;IACjB,MAAM,IAAI,OAAO,CAAC;IAClB,WAAW,IAAI,OAAO,CAAC;IAGvB,WAAW,CAAC,MAAM,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,MAAM,GAAG,YAAY,CAAC;IAC1D,OAAO,CAAC,MAAM,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,GAAG,GAAG,OAAO,CAAC,EAAE,CAAC,aAAa,CAAC,MAAM,CAAC,CAAC,CAAC;IAE1E,eAAe,IAAI,MAAM,CAAC;IAC1B,sBAAsB,IAAI,OAAO,CAAC;IAClC,oBAAoB,CAAC,IAAI,EAAE,MAAM,EAAE,OAAO,EAAE,MAAM,EAAE,GAAG,EAAE,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC;IACzE,OAAO,CAAC,WAAW,EAAE,QAAQ,EAAE,YAAY,CAAC,EAAE,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC;IACzE,2BAA2B,CAAC,MAAM,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,EAC7D,YAAY,CAAC,EAAE,MAAM,EAAE,cAAc,CAAC,EAAE,MAAM,GAAG,MAAM,CAAC;IAC1D,SAAS,CAAC,QAAQ,EAAE,MAAM,GAAG,IAAI,EAAE,MAAM,EAAE,MAAM,GAAG,IAAI,EAAE,IAAI,EAAE,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC;IAC3F,SAAS,CAAC,IAAI,CAAC,EAAE;QAAE,QAAQ,EAAE,QAAQ,CAAC;QAAC,SAAS,CAAC,EAAE,MAAM,CAAA;KAAE,GAAG,UAAU,CAAC;IAEzE,uBAAuB,IAAI,wBAAwB,CAAC;IACpD,YAAY,CAAC,QAAQ,EAAE,QAAQ,EAAE,YAAY,CAAC,EAAE,MAAM,GAAG,WAAW,CAAC;IACrE,eAAe,CAAC,OAAO,EAAE,EAAE,CAAC,UAAU,GAAG,IAAI,EAAE,QAAQ,EAAE,EAAE,CAAC,MAAM,CAAC,MAAM,CAAC,GAAG,oBAAoB,CAAC,MAAM,CAAC,CAAC;CAC3G"}
package/src/utils/seq-helper.d.ts CHANGED
@@ -15,6 +15,9 @@ export interface ISeqHelper {
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  helmToAtomicLevel(helmCol: DG.Column<string>, chiralityEngine?: boolean, highlight?: boolean, overrideMonomerLib?: IMonomerLibBase): Promise<ToAtomicLevelRes>;
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  getSeqHandler(seqCol: DG.Column<string>): ISeqHandler;
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  getSeqMonomers(seqCol: DG.Column<string>): string[];
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+ setUnitsToFastaColumn(sh: ISeqHandler): void;
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+ setUnitsToSeparatorColumn(sh: ISeqHandler): void;
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+ setUnitsToHelmColumn(sh: ISeqHandler): void;
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  }
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  export declare function getSeqHelper(): Promise<ISeqHelper>;
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  //# sourceMappingURL=seq-helper.d.ts.map
package/src/utils/seq-helper.d.ts.map CHANGED
@@ -1 +1 @@
1
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package/src/utils/seq-helper.js.map CHANGED
@@ -1 +1 @@
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