@datagrok-libraries/bio 5.38.12 → 5.39.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/CHANGELOG.md +5 -2
- package/package.json +1 -1
- package/src/utils/units-handler.d.ts.map +1 -1
- package/src/utils/units-handler.js +7 -5
- package/src/utils/units-handler.js.map +1 -1
- package/src/viewers/molstar-viewer.d.ts +1 -1
- package/src/viewers/molstar-viewer.d.ts.map +1 -1
- package/src/viewers/molstar-viewer.js +1 -1
- package/src/viewers/molstar-viewer.js.map +1 -1
- package/src/viewers/web-logo.d.ts +4 -0
- package/src/viewers/web-logo.d.ts.map +1 -1
- package/src/viewers/web-logo.js +5 -0
- package/src/viewers/web-logo.js.map +1 -1
package/CHANGELOG.md
CHANGED
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@@ -1,10 +1,11 @@
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# bio changelog
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-
## 5.39.0 (
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## 5.39.0 (2023-10-25)
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### Features
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* Add VdRegionsViewer
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* Add VdRegionsViewer `filterSource` property.
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* Add WebLogo `valueAggrType`, `valueColumnName` properties.
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### Bug fixes
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@@ -14,6 +15,8 @@
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* Add property fitWidth for VdRegionsViewer
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* Fix UnitsHandler to not replace existing tags
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* Fix VdRegionsViewer fit width accounting position margin of WebLogo
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* Fix UnitsHandler to allow empty alphabet if annotated with tag.
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* Fix UnitsHandler.maxLength to be zero for empty data.
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## 5.38.0 (2023-09-06)
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package/package.json
CHANGED
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"units-handler.d.ts","sourceRoot":"","sources":["units-handler.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAItC,OAAO,EAA4B,QAAQ,EAAwC,MAAM,iBAAiB,CAAC;AAC3G,OAAO,EAAC,YAAY,EAAE,WAAW,EAAE,YAAY,EAAC,MAAM,uBAAuB,CAAC;AAK9E,OAAO,EACgB,wBAAwB,EAC9C,MAAM,6DAA6D,CAAC;AACrE,OAAO,EAAC,sBAAsB,EAAC,MAAM,mEAAmE,CAAC;AAIzG,eAAO,MAAM,IAAI;IACf,wDAAwD;;CAEvD,CAAC;AAEJ,eAAO,MAAM,UAAU,EAAE;IACvB,CAAC,KAAK,EAAE,MAAM,GAAG,MAAM,CAAA;CAKxB,CAAC;AAEF,MAAM,MAAM,WAAW,GAAG,CAAC,GAAG,EAAE,MAAM,KAAK,MAAM,CAAC;AAClD,MAAM,MAAM,UAAU,GAAG,CAAC,GAAG,EAAE,YAAY,KAAK,MAAM,CAAC;AAEvD;;GAEG;AACH,qBAAa,YAAY;IACvB,SAAS,CAAC,QAAQ,CAAC,OAAO,EAAE,EAAE,CAAC,MAAM,CAAC;IACtC,SAAS,CAAC,MAAM,EAAE,MAAM,CAAC;IACzB,SAAS,CAAC,SAAS,EAAE,QAAQ,CAAC;IAC9B,SAAS,CAAC,iBAAiB,EAAE,MAAM,CAAC;IAEpC,OAAO,CAAC,SAAS,CAA6B;WAEhC,qBAAqB,CAAC,EAAE,EAAE,YAAY;WAQtC,yBAAyB,CAAC,EAAE,EAAE,YAAY,EAAE,SAAS,CAAC,EAAE,MAAM;WAW9D,oBAAoB,CAAC,EAAE,EAAE,YAAY;IAQnD,+BAA+B;WACjB,OAAO,CAAC,EAAE,EAAE,YAAY,GAAG,IAAI;
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{"version":3,"file":"units-handler.d.ts","sourceRoot":"","sources":["units-handler.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAItC,OAAO,EAA4B,QAAQ,EAAwC,MAAM,iBAAiB,CAAC;AAC3G,OAAO,EAAC,YAAY,EAAE,WAAW,EAAE,YAAY,EAAC,MAAM,uBAAuB,CAAC;AAK9E,OAAO,EACgB,wBAAwB,EAC9C,MAAM,6DAA6D,CAAC;AACrE,OAAO,EAAC,sBAAsB,EAAC,MAAM,mEAAmE,CAAC;AAIzG,eAAO,MAAM,IAAI;IACf,wDAAwD;;CAEvD,CAAC;AAEJ,eAAO,MAAM,UAAU,EAAE;IACvB,CAAC,KAAK,EAAE,MAAM,GAAG,MAAM,CAAA;CAKxB,CAAC;AAEF,MAAM,MAAM,WAAW,GAAG,CAAC,GAAG,EAAE,MAAM,KAAK,MAAM,CAAC;AAClD,MAAM,MAAM,UAAU,GAAG,CAAC,GAAG,EAAE,YAAY,KAAK,MAAM,CAAC;AAEvD;;GAEG;AACH,qBAAa,YAAY;IACvB,SAAS,CAAC,QAAQ,CAAC,OAAO,EAAE,EAAE,CAAC,MAAM,CAAC;IACtC,SAAS,CAAC,MAAM,EAAE,MAAM,CAAC;IACzB,SAAS,CAAC,SAAS,EAAE,QAAQ,CAAC;IAC9B,SAAS,CAAC,iBAAiB,EAAE,MAAM,CAAC;IAEpC,OAAO,CAAC,SAAS,CAA6B;WAEhC,qBAAqB,CAAC,EAAE,EAAE,YAAY;WAQtC,yBAAyB,CAAC,EAAE,EAAE,YAAY,EAAE,SAAS,CAAC,EAAE,MAAM;WAW9D,oBAAoB,CAAC,EAAE,EAAE,YAAY;IAQnD,+BAA+B;WACjB,OAAO,CAAC,EAAE,EAAE,YAAY,GAAG,IAAI;IA8B7C,SAAS,KAAK,MAAM,IAAI,EAAE,CAAC,MAAM,CAAyB;IAE1D,IAAW,KAAK,IAAI,MAAM,CAAwB;IAElD,IAAW,QAAQ,IAAI,QAAQ,CAA2B;IAE1D,IAAW,gBAAgB,IAAI,MAAM,CAAmC;IAExE,IAAW,SAAS,IAAI,MAAM,GAAG,SAAS,CAKzC;IAED,IAAW,OAAO,IAAI,MAAM,CAQ3B;IAED,iCAAiC;IACjC,IAAW,QAAQ,IAAI,MAAM,CAQ5B;IAED,SAAS,KAAK,cAAc,IAAI,MAAM,GAAG,SAAS,CAEjD;IAEM,eAAe,IAAI,MAAM;IA4BzB,sBAAsB,IAAI,OAAO;IASxC,OAAO,CAAC,SAAS,CAA+B;IAChD,MAAM;IACN,IAAW,QAAQ,IAAI,YAAY,EAAE,CAapC;IAED,OAAO,CAAC,MAAM,CAA4B;IAE1C,IAAW,KAAK,IAAI,WAAW,CAqB9B;IAED,OAAO,CAAC,UAAU,CAAuB;IACzC,IAAW,SAAS,IAAI,MAAM,CAM7B;IAED,OAAO,CAAC,QAAQ,CAAyB;IACzC,IAAW,OAAO,IAAI,MAAM,EAAE,CAO7B;IAEM,OAAO,IAAI,OAAO;IAElB,WAAW,IAAI,OAAO;IAEtB,MAAM,IAAI,OAAO;IAEjB,KAAK,IAAI,OAAO;IAEhB,KAAK,IAAI,OAAO;IAEhB,SAAS,IAAI,OAAO;IAEpB,KAAK,IAAI,OAAO;IAEhB,gBAAgB,IAAI,OAAO;IAE3B,KAAK,CAAC,CAAC,EAAE,MAAM,GAAG,OAAO;IAKhC,4DAA4D;IAC5D;;OAEG;IACH,SAAS,CAAC,WAAW,IAAI,QAAQ;IAYjC;;;;;OAKG;IACI,eAAe,IAAI,MAAM,EAAE;IAWlC;;;;;;OAMG;IACH,SAAS,CAAC,YAAY,CAAC,WAAW,EAAE,QAAQ,EAAE,YAAY,CAAC,EAAE,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,MAAM,CAAC;IAsCvF;;;;;;OAMG;WACW,YAAY,CAAC,WAAW,EAAE,EAAE,CAAC,MAAM,GAAG,EAAE,CAAC,MAAM;IAM7D;;;;;OAKG;WACW,kBAAkB,CAAC,KAAK,EAAE,MAAM,GAAG,OAAO;IASxD;;;;;;;;OAQG;WACW,sBAAsB,CAClC,GAAG,EAAE,MAAM,EACX,IAAI,EAAE,MAAM,EACZ,KAAK,EAAE,MAAM,GACZ,EAAE,CAAC,MAAM;IAYZ,mDAAmD;IAC5C,WAAW,CAAC,KAAK,CAAC,EAAE,MAAM,GAAG,YAAY;IAiBzC,uBAAuB,IAAI,wBAAwB;IAoBnD,mBAAmB,IAAI,sBAAsB;IAKvC,sBAAsB,IAAI,OAAO,CAAC,OAAO,CAAC;IAgCvD,SAAS,KAAK,QAAQ,IAAI,YAAY,CAIrC;IAEM,OAAO,CAAC,cAAc,EAAE,QAAQ,GAAG,OAAO;IAE1C,WAAW,CAAC,cAAc,EAAE,QAAQ,GAAG,OAAO;IAE9C,MAAM,CAAC,cAAc,EAAE,QAAQ,GAAG,OAAO;IAEhD;;;;;;;;;OASG;IACI,2BAA2B,CAChC,WAAW,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,EAAE,YAAY,CAAC,EAAE,MAAM,EAAE,YAAY,CAAC,EAAE,MAAM,GACrF,MAAM;IA8BT;;;;;OAKG;IACI,OAAO,CAAC,WAAW,EAAE,QAAQ,EAAE,YAAY,CAAC,EAAE,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,MAAM,CAAC;IAS/E;;;;OAIG;IACI,SAAS,CAAC,QAAQ,EAAE,MAAM,GAAG,IAAI,EAAE,MAAM,EAAE,MAAM,GAAG,IAAI,EAAE,IAAI,EAAE,MAAM,GAAG,EAAE,CAAC,MAAM,CAAC,MAAM,CAAC;IAyC1F,SAAS,IAAI,UAAU;IAavB,YAAY,CAAC,QAAQ,EAAE,QAAQ,EAAE,YAAY,GAAE,MAAM,GAAG,SAAqB,GAAG,WAAW;IAelG,SAAS,aAAa,GAAG,EAAE,EAAE,CAAC,MAAM,CAAC,MAAM,CAAC;IAiD5C,0GAA0G;WAC5F,WAAW,CAAC,GAAG,EAAE,EAAE,CAAC,MAAM,CAAC,MAAM,CAAC,GAAG,YAAY;CAIhE"}
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@@ -47,9 +47,9 @@ export class UnitsHandler {
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const stats = uh.stats;
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const alphabetIsMultichar = Object.keys(stats.freq).some((m) => m.length > 1);
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if ([NOTATION.FASTA, NOTATION.SEPARATOR].includes(units)) {
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// Empty monomer alphabet is
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if (Object.keys(stats.freq).length === 0)
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throw new Error('Alphabet is empty');
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// Empty monomer alphabet is allowed, only if alphabet tag is annotated
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if (!uh.column.getTag("alphabet" /* TAGS.alphabet */) && Object.keys(stats.freq).length === 0)
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throw new Error('Alphabet is empty and not annotated.');
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let aligned = uh.column.getTag("aligned" /* TAGS.aligned */);
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if (aligned === null) {
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aligned = stats.sameLength ? "SEQ.MSA" /* ALIGNMENT.SEQ_MSA */ : "SEQ" /* ALIGNMENT.SEQ */;
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@@ -168,8 +168,10 @@ export class UnitsHandler {
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return this._stats;
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}
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get maxLength() {
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if (this._maxLength === null)
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this._maxLength =
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if (this._maxLength === null) {
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this._maxLength = this.splitted.length === 0 ? 0 :
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Math.max(...this.splitted.map((seqS) => seqS.length));
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}
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return this._maxLength;
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}
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get posList() {
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@@ -1 +1 @@
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-
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1
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+
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+
{"version":3,"file":"molstar-viewer.d.ts","sourceRoot":"","sources":["molstar-viewer.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAItC,OAAO,EAAC,OAAO,EAAC,MAAM,UAAU,CAAC;AACjC,OAAO,EAAC,mBAAmB,EAAC,MAAM,mBAAmB,CAAC;AAEtD,oBAAY,kBAAkB;IAC5B,OAAO,YAAY;IACnB,QAAQ,aAAa;IACrB,YAAY,eAAe;IAC3B,QAAQ,aAAa;IACrB,SAAS,cAAc;IACvB,OAAO,YAAY;CACpB;AAED,oBAAY,sBAAsB;IAChC,IAAI,SAAS;IACb,SAAS,cAAc;IACvB,MAAM,WAAW;CAClB;AAED,oBAAY,4BAA4B;IACtC,IAAI,SAAS;IACb,MAAM,WAAW;CAClB;AAED,oBAAY,+BAA+B;IACzC,OAAO,YAAY;IACnB,QAAQ,aAAa;IACrB,SAAS,cAAc;IACvB,QAAQ,aAAa;CACtB;AAED,MAAM,MAAM,eAAe,GAAG;IAC5B,GAAG,EAAE,MAAM,CAAC;IAAC,IAAI,EAAE,MAAM,GAAG,UAAU,CAAC;IAAC,OAAO,CAAC,EAAE;QAAE,SAAS,CAAC,EAAE,MAAM,CAAC;KAAE,CAAC;CAC3E,CAAC;AAEF,eAAO,MAAM,wBAAwB;UAE7B,MAAM;SACP,MAAM,GAAG,IAAI;YACV,MAAM,GAAG,IAAI;sBACH,MAAM,GAAG,IAAI;iBAClB,MAAM;kBACL,MAAM;oBAGJ,kBAAkB;sBAGhB,OAAO;wBACL,OAAO;2BACJ,sBAAsB;0BACvB,4BAA4B;4BAC1B,4BAA4B;6BAC3B,4BAA4B;2BAC9B,+BAA+B;wBAElC,OAAO;yBACN,OAAO;iCACC,OAAO;+BAGT,OAAO;kCAMJ,OAAO;mCAEN,OAAO;IAGtC;;;OAGG;wBACiB,OAAO;2BAEJ,OAAO;wBACV,OAAO;mBACZ,OAAO;yBACD,OAAO;uBAET,OAAO;wBACN,OAAO;wBACP,OAAO;0BACL,OAAO;+BAEF,OAAO;2BACX,MAAM;qBACZ,MAAM;sBACL,OAAO;uBAEN,MAAM;wBACL,OAAO;CAC1B,CAAC;AAEJ,MAAM,MAAM,iBAAiB,GAAG,QAAQ,CAAC,OAAO,wBAAwB,CAAC,CAAC;AAE1E,MAAM,WAAW,mBAAoB,SAAQ,OAAO;IAClD,UAAU,CAAC,OAAO,EAAE,OAAO,CAAC,iBAAiB,CAAC,GAAG,IAAI,CAAC;CACvD;AAGD,MAAM,WAAW,cAAe,SAAQ,OAAO;IAC7C,OAAO,CAAC,EAAE,EAAE,mBAAmB,GAAG,EAAE,CAAC,SAAS,GAAG,IAAI,CAAC;CACvD;AAED,OAAO,QAAQ,iBAAiB,CAAC;IAC/B,UAAU,mBAAmB;QAC3B,QAAQ,CAAC,UAAU,EAAE,cAAc,EAAE,OAAO,EAAE,OAAO,CAAC,iBAAiB,CAAC,GAAG,OAAO,CAAC,EAAE,CAAC,MAAM,GAAG,mBAAmB,CAAC,CAAC;KACrH;CACF"}
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"molstar-viewer.js","sourceRoot":"","sources":["molstar-viewer.ts"],"names":[],"mappings":"AAOA,MAAM,CAAN,IAAY,kBAOX;AAPD,WAAY,kBAAkB;IAC5B,yCAAmB,CAAA;IACnB,2CAAqB,CAAA;IACrB,iDAA2B,CAAA;IAC3B,2CAAqB,CAAA;IACrB,6CAAuB,CAAA;IACvB,yCAAmB,CAAA;AACrB,CAAC,EAPW,kBAAkB,KAAlB,kBAAkB,QAO7B;AAED,MAAM,CAAN,IAAY,sBAIX;AAJD,WAAY,sBAAsB;IAChC,uCAAa,CAAA;IACb,iDAAuB,CAAA;IACvB,2CAAiB,CAAA;AACnB,CAAC,EAJW,sBAAsB,KAAtB,sBAAsB,QAIjC;AAED,MAAM,CAAN,IAAY,4BAGX;AAHD,WAAY,4BAA4B;IACtC,6CAAa,CAAA;IACb,iDAAiB,CAAA;AACnB,CAAC,EAHW,4BAA4B,KAA5B,4BAA4B,QAGvC;AAED,MAAM,CAAN,IAAY,+BAKX;AALD,WAAY,+BAA+B;IACzC,sDAAmB,CAAA;IACnB,wDAAqB,CAAA;IACrB,0DAAuB,CAAA;IACvB,wDAAqB,CAAA;AACvB,CAAC,EALW,+BAA+B,KAA/B,+BAA+B,QAK1C;AAMD,MAAM,CAAC,MAAM,wBAAwB,GAAG,IAAI;IAAA;QAC1C,aAAa;QACb,SAAI,
|
|
1
|
+
{"version":3,"file":"molstar-viewer.js","sourceRoot":"","sources":["molstar-viewer.ts"],"names":[],"mappings":"AAOA,MAAM,CAAN,IAAY,kBAOX;AAPD,WAAY,kBAAkB;IAC5B,yCAAmB,CAAA;IACnB,2CAAqB,CAAA;IACrB,iDAA2B,CAAA;IAC3B,2CAAqB,CAAA;IACrB,6CAAuB,CAAA;IACvB,yCAAmB,CAAA;AACrB,CAAC,EAPW,kBAAkB,KAAlB,kBAAkB,QAO7B;AAED,MAAM,CAAN,IAAY,sBAIX;AAJD,WAAY,sBAAsB;IAChC,uCAAa,CAAA;IACb,iDAAuB,CAAA;IACvB,2CAAiB,CAAA;AACnB,CAAC,EAJW,sBAAsB,KAAtB,sBAAsB,QAIjC;AAED,MAAM,CAAN,IAAY,4BAGX;AAHD,WAAY,4BAA4B;IACtC,6CAAa,CAAA;IACb,iDAAiB,CAAA;AACnB,CAAC,EAHW,4BAA4B,KAA5B,4BAA4B,QAGvC;AAED,MAAM,CAAN,IAAY,+BAKX;AALD,WAAY,+BAA+B;IACzC,sDAAmB,CAAA;IACnB,wDAAqB,CAAA;IACrB,0DAAuB,CAAA;IACvB,wDAAqB,CAAA;AACvB,CAAC,EALW,+BAA+B,KAA/B,+BAA+B,QAK1C;AAMD,MAAM,CAAC,MAAM,wBAAwB,GAAG,IAAI;IAAA;QAC1C,aAAa;QACb,SAAI,GAAW,MAAM,CAAC;QACtB,QAAG,GAAkB,IAAI,CAAC;QAC1B,WAAM,GAAkB,IAAI,CAAC;QAC7B,qBAAgB,GAAkB,IAAI,CAAC;QACvC,gBAAW,GAAW,MAAM,CAAC;QAC7B,iBAAY,GAAW,MAAM,CAAC;QAE9B,cAAc;QACd,mBAAc,GAAuB,kBAAkB,CAAC,OAAO,CAAC;QAEhE,eAAe;QACf,qBAAgB,GAAY,KAAK,CAAC;QAClC,uBAAkB,GAAY,KAAK,CAAC;QACpC,0BAAqB,GAA2B,sBAAsB,CAAC,IAAI,CAAC;QAC5E,yBAAoB,GAAiC,4BAA4B,CAAC,IAAI,CAAC;QACvF,2BAAsB,GAAiC,4BAA4B,CAAC,IAAI,CAAC;QACzF,4BAAuB,GAAiC,4BAA4B,CAAC,IAAI,CAAC;QAC1F,0BAAqB,GAAoC,+BAA+B,CAAC,OAAO,CAAC;QAEjG,uBAAkB,GAAY,KAAK,CAAC;QACpC,wBAAmB,GAAY,KAAK,CAAC;QACrC,gCAA2B,GAAY,IAAI,CAAC;QAC5C,kCAAkC;QAClC,sCAAsC;QACtC,8BAAyB,GAAY,IAAI,CAAC;QAE1C,kCAAkC;QAClC,wCAAwC;QACxC,qCAAqC;QACrC,sCAAsC;QACtC,iCAA4B,GAAY,IAAI,CAAC;QAE7C,kCAA6B,GAAY,KAAK,CAAC;QAE/C,6BAA6B;QAC7B;;;WAGG;QACH,uBAAkB,GAAY,KAAK,CAAC;QAEpC,0BAAqB,GAAY,KAAK,CAAC;QACvC,uBAAkB,GAAY,KAAK,CAAC;QACpC,kBAAa,GAAY,KAAK,CAAC;QAC/B,wBAAmB,GAAY,KAAK,CAAC;QAErC,sBAAiB,GAAY,IAAI,CAAC;QAClC,uBAAkB,GAAY,IAAI,CAAC;QACnC,uBAAkB,GAAY,KAAK,CAAC;QACpC,yBAAoB,GAAY,KAAK,CAAC;QAEtC,8BAAyB,GAAY,IAAI,CAAC;QAC1C,0BAAqB,GAAW,wBAAwB,CAAC;QACzD,oBAAe,GAAW,QAAQ,CAAC,CAAC,QAAQ;QAC5C,qBAAgB,GAAY,KAAK,CAAC;QAElC,sBAAiB,GAAW,EAAE,CAAC;QAC/B,uBAAkB,GAAY,KAAK,CAAC;IACtC,CAAC;CAAA,EAAE,CAAC"}
|
|
@@ -37,6 +37,10 @@ export declare enum FilterSources {
|
|
|
37
37
|
}
|
|
38
38
|
export declare const WebLogoPropsDefault: {
|
|
39
39
|
sequenceColumnName: string | null;
|
|
40
|
+
/** Aggregation function for values of {@link valueColumnName} */
|
|
41
|
+
valueAggrType: DG.AggregationType;
|
|
42
|
+
/** Column name for values */
|
|
43
|
+
valueColumnName: string;
|
|
40
44
|
startPositionName: string | null;
|
|
41
45
|
endPositionName: string | null;
|
|
42
46
|
skipEmptySequences: boolean;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"web-logo.d.ts","sourceRoot":"","sources":["web-logo.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAEtC,OAAO,EAAC,UAAU,EAAC,MAAM,MAAM,CAAC;AAEhC,OAAO,EAAC,OAAO,EAAC,MAAM,UAAU,CAAC;AAEjC,oBAAY,IAAI;IACd,6EAA6E;IAC7E,cAAc,oBAAoB;CACnC;AAED,oBAAY,cAAc;IACxB,OAAO,YAAY;IACnB,IAAI,SAAS;CACd;AAED,0BAA0B;AAC1B,oBAAY,kBAAkB;IAC5B,GAAG,QAAQ;IACX,MAAM,WAAW;IACjB,MAAM,WAAW;CAClB;AAED,0BAA0B;AAC1B,oBAAY,oBAAoB;IAC9B,IAAI,SAAS;IACb,MAAM,WAAW;IACjB,KAAK,UAAU;CAChB;AAED,oBAAY,oBAAoB;IAC9B,IAAI,SAAS;IACb,EAAE,OAAO;IACT,GAAG,QAAQ;CACZ;AAED,qEAAqE;AACrE,oBAAY,aAAa;IACvB,0DAA0D;IAC1D,QAAQ,aAAa;IACrB;;OAEG;IACH,QAAQ,aAAa;CACtB;AAED,eAAO,MAAM,mBAAmB;wBAEV,MAAM,GAAG,IAAI;
|
|
1
|
+
{"version":3,"file":"web-logo.d.ts","sourceRoot":"","sources":["web-logo.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAEtC,OAAO,EAAC,UAAU,EAAC,MAAM,MAAM,CAAC;AAEhC,OAAO,EAAC,OAAO,EAAC,MAAM,UAAU,CAAC;AAEjC,oBAAY,IAAI;IACd,6EAA6E;IAC7E,cAAc,oBAAoB;CACnC;AAED,oBAAY,cAAc;IACxB,OAAO,YAAY;IACnB,IAAI,SAAS;CACd;AAED,0BAA0B;AAC1B,oBAAY,kBAAkB;IAC5B,GAAG,QAAQ;IACX,MAAM,WAAW;IACjB,MAAM,WAAW;CAClB;AAED,0BAA0B;AAC1B,oBAAY,oBAAoB;IAC9B,IAAI,SAAS;IACb,MAAM,WAAW;IACjB,KAAK,UAAU;CAChB;AAED,oBAAY,oBAAoB;IAC9B,IAAI,SAAS;IACb,EAAE,OAAO;IACT,GAAG,QAAQ;CACZ;AAED,qEAAqE;AACrE,oBAAY,aAAa;IACvB,0DAA0D;IAC1D,QAAQ,aAAa;IACrB;;OAEG;IACH,QAAQ,aAAa;CACtB;AAED,eAAO,MAAM,mBAAmB;wBAEV,MAAM,GAAG,IAAI;IACjC,iEAAiE;mBAClD,GAAG,eAAe;IACjC,6BAA6B;qBACZ,MAAM;uBACJ,MAAM,GAAG,IAAI;qBACf,MAAM,GAAG,IAAI;wBACV,OAAO;wBACP,OAAO;qBACV,OAAO;qBAGP,MAAM;oBACP,MAAM;mBACP,MAAM;uBAGF,kBAAkB;yBAChB,oBAAoB;cAC/B,OAAO;aACR,OAAO;eACL,MAAM;eACN,MAAM;wBACG,OAAO;yBACN,oBAAoB;oBACzB,MAAM;kBAGR,aAAa;CAC1B,CAAC;AAEJ,MAAM,MAAM,YAAY,GAAG,QAAQ,CAAC,OAAO,mBAAmB,CAAC,CAAC;AAEhE,MAAM,WAAW,cAAe,SAAQ,YAAY,EAAE,OAAO;IAC3D,IAAI,aAAa,IAAI,UAAU,CAAC,IAAI,CAAC,CAAC;IAEtC,IAAI,mBAAmB,IAAI,MAAM,CAAC;IAElC,UAAU,CAAC,OAAO,EAAE,OAAO,CAAC,YAAY,CAAC,GAAG,IAAI,CAAC;CAClD;AAED,eAAO,MAAM,UAAU,EAAE,MAAwB,CAAC;AAElD,OAAO,QAAQ,iBAAiB,CAAC;IAC/B,UAAiB,mBAAmB;QAClC,QAAQ,CAAC,UAAU,EAAE,SAAS,EAAE,OAAO,EAAE,OAAO,CAAC,YAAY,CAAC,GAAG,OAAO,CAAC,EAAE,CAAC,MAAM,GAAG,cAAc,CAAC,CAAC;KACtG;CACF"}
|
package/src/viewers/web-logo.js
CHANGED
|
@@ -1,3 +1,4 @@
|
|
|
1
|
+
import * as DG from 'datagrok-api/dg';
|
|
1
2
|
export var TAGS;
|
|
2
3
|
(function (TAGS) {
|
|
3
4
|
/** Controls displaying WebLogo in a Macromolecule column's header tooltip */
|
|
@@ -42,6 +43,10 @@ export const WebLogoPropsDefault = new class {
|
|
|
42
43
|
constructor() {
|
|
43
44
|
// -- Data --
|
|
44
45
|
this.sequenceColumnName = null;
|
|
46
|
+
/** Aggregation function for values of {@link valueColumnName} */
|
|
47
|
+
this.valueAggrType = DG.AGG.TOTAL_COUNT;
|
|
48
|
+
/** Column name for values */
|
|
49
|
+
this.valueColumnName = 'Activity';
|
|
45
50
|
this.startPositionName = null;
|
|
46
51
|
this.endPositionName = null;
|
|
47
52
|
this.skipEmptySequences = true;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"web-logo.js","sourceRoot":"","sources":["web-logo.ts"],"names":[],"mappings":"
|
|
1
|
+
{"version":3,"file":"web-logo.js","sourceRoot":"","sources":["web-logo.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,MAAM,iBAAiB,CAAC;AAMtC,MAAM,CAAN,IAAY,IAGX;AAHD,WAAY,IAAI;IACd,6EAA6E;IAC7E,0CAAkC,CAAA;AACpC,CAAC,EAHW,IAAI,KAAJ,IAAI,QAGf;AAED,MAAM,CAAN,IAAY,cAGX;AAHD,WAAY,cAAc;IACxB,qCAAmB,CAAA;IACnB,+BAAa,CAAA;AACf,CAAC,EAHW,cAAc,KAAd,cAAc,QAGzB;AAED,0BAA0B;AAC1B,MAAM,CAAN,IAAY,kBAIX;AAJD,WAAY,kBAAkB;IAC5B,iCAAW,CAAA;IACX,uCAAiB,CAAA;IACjB,uCAAiB,CAAA;AACnB,CAAC,EAJW,kBAAkB,KAAlB,kBAAkB,QAI7B;AAED,0BAA0B;AAC1B,MAAM,CAAN,IAAY,oBAIX;AAJD,WAAY,oBAAoB;IAC9B,qCAAa,CAAA;IACb,yCAAiB,CAAA;IACjB,uCAAe,CAAA;AACjB,CAAC,EAJW,oBAAoB,KAApB,oBAAoB,QAI/B;AAED,MAAM,CAAN,IAAY,oBAIX;AAJD,WAAY,oBAAoB;IAC9B,qCAAa,CAAA;IACb,iCAAS,CAAA;IACT,mCAAW,CAAA;AACb,CAAC,EAJW,oBAAoB,KAApB,oBAAoB,QAI/B;AAED,qEAAqE;AACrE,MAAM,CAAN,IAAY,aAOX;AAPD,WAAY,aAAa;IACvB,0DAA0D;IAC1D,sCAAqB,CAAA;IACrB;;OAEG;IACH,sCAAqB,CAAA;AACvB,CAAC,EAPW,aAAa,KAAb,aAAa,QAOxB;AAED,MAAM,CAAC,MAAM,mBAAmB,GAAG,IAAI;IAAA;QACrC,aAAa;QACb,uBAAkB,GAAkB,IAAI,CAAC;QACzC,iEAAiE;QACjE,kBAAa,GAAuB,EAAE,CAAC,GAAG,CAAC,WAAW,CAAC;QACvD,6BAA6B;QAC7B,oBAAe,GAAW,UAAU,CAAC;QACrC,sBAAiB,GAAkB,IAAI,CAAC;QACxC,oBAAe,GAAkB,IAAI,CAAC;QACtC,uBAAkB,GAAY,IAAI,CAAC;QACnC,uBAAkB,GAAY,KAAK,CAAC;QACpC,oBAAe,GAAY,IAAI,CAAC;QAEhC,cAAc;QACd,oBAAe,GAAW,UAAU,CAAC;QACrC,mBAAc,GAAW,cAAc,CAAC,OAAO,CAAC,CAAC,+CAA+C;QAChG,kBAAa,GAAW,EAAE,CAAC;QAE3B,eAAe;QACf,sBAAiB,GAAuB,kBAAkB,CAAC,MAAM,CAAC;QAClE,wBAAmB,GAAyB,oBAAoB,CAAC,MAAM,CAAC;QACxE,aAAQ,GAAY,KAAK,CAAC;QAC1B,YAAO,GAAY,IAAI,CAAC;QACxB,cAAS,GAAW,EAAE,CAAC;QACvB,cAAS,GAAW,GAAG,CAAC;QACxB,uBAAkB,GAAY,IAAI,CAAC;QACnC,wBAAmB,GAAyB,oBAAoB,CAAC,IAAI,CAAC;QACtE,mBAAc,GAAW,CAAC,CAAC;QAE3B,iBAAiB;QACjB,iBAAY,GAAkB,aAAa,CAAC,QAAQ,CAAC;IACvD,CAAC;CAAA,EAAE,CAAC;AAYJ,MAAM,CAAC,MAAM,UAAU,GAAW,eAAe,CAAC"}
|