@datagrok-libraries/bio 5.1.1 → 5.2.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
package/index.d.ts CHANGED
@@ -1,7 +1,7 @@
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- import { AminoacidsPalettes } from './src/aminoacids';
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- import { NucleotidesPalettes } from './src/nucleotides';
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+ import { Aminoacids, AminoacidsPalettes } from './src/aminoacids';
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+ import { Nucleotides, NucleotidesPalettes } from './src/nucleotides';
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  import { SeqPalette, SeqPaletteBase } from './src/seq-palettes';
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- import { UnknownSeqPalettes } from './src/unknown';
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+ import { UnknownSeqPalette, UnknownSeqPalettes } from './src/unknown';
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  import { DrawStyle, printLeftOrCentered } from './src/utils/cell-renderer';
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  import { FastaFileHandler } from './src/utils/fasta-handler';
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  import { getSplitter, splitterAsFasta, getSplitterForColumn, SplitterFunc, monomerToShort, splitterAsHelm, getStats, pickUpPalette, getPaletteByType, getAlphabetSimilarity, ALPHABET, NOTATION, TAGS } from './src/utils/macromolecule';
@@ -11,6 +11,6 @@ import { UnitsHandler } from './src/utils/units-handler';
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  import { VdRegion, VdRegionType } from './src/vd-regions';
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  import { IPhylocanvasGlViewer } from './src/viewers/phylocanvas-gl-viewer';
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  import { IVdRegionsViewer } from './src/viewers/vd-regions-viewer';
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- import { PositionInfo, PositionMonomerInfo, WebLogo } from './src/viewers/web-logo';
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- export { ALPHABET, NOTATION, TAGS, NotationConverter, SplitterFunc, getStats, getAlphabetSimilarity, getSplitter, splitterAsFasta, splitterAsHelm, getSplitterForColumn, monomerToShort, splitAlignedSequences, SeqPalette, SeqPaletteBase, AminoacidsPalettes, NucleotidesPalettes, UnknownSeqPalettes, pickUpPalette, getPaletteByType, PositionInfo, PositionMonomerInfo, WebLogo, UnitsHandler, DrawStyle, printLeftOrCentered, FastaFileHandler, VdRegionType, VdRegion, IVdRegionsViewer, IPhylocanvasGlViewer, };
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+ import { PositionHeight, PositionInfo, PositionMonomerInfo, WebLogoViewer } from './src/viewers/web-logo-viewer';
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+ export { ALPHABET, NOTATION, TAGS, NotationConverter, SplitterFunc, getStats, getAlphabetSimilarity, getSplitter, splitterAsFasta, splitterAsHelm, getSplitterForColumn, monomerToShort, splitAlignedSequences, SeqPalette, SeqPaletteBase, Aminoacids, AminoacidsPalettes, Nucleotides, NucleotidesPalettes, UnknownSeqPalettes, UnknownSeqPalette, pickUpPalette, getPaletteByType, PositionHeight, PositionInfo, PositionMonomerInfo, WebLogoViewer, UnitsHandler, DrawStyle, printLeftOrCentered, FastaFileHandler, VdRegionType, VdRegion, IVdRegionsViewer, IPhylocanvasGlViewer, };
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  //# sourceMappingURL=index.d.ts.map
package/index.d.ts.map CHANGED
@@ -1 +1 @@
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+ {"version":3,"file":"index.d.ts","sourceRoot":"","sources":["index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAC,UAAU,EAAE,kBAAkB,EAAC,MAAM,kBAAkB,CAAC;AAChE,OAAO,EAAC,WAAW,EAAE,mBAAmB,EAAC,MAAM,mBAAmB,CAAC;AACnE,OAAO,EAAC,UAAU,EAAE,cAAc,EAAC,MAAM,oBAAoB,CAAC;AAC9D,OAAO,EAAC,iBAAiB,EAAE,kBAAkB,EAAC,MAAM,eAAe,CAAC;AACpE,OAAO,EAAC,SAAS,EAAE,mBAAmB,EAAC,MAAM,2BAA2B,CAAC;AACzE,OAAO,EAAC,gBAAgB,EAAC,MAAM,2BAA2B,CAAC;AAC3D,OAAO,EACL,WAAW,EACX,eAAe,EACf,oBAAoB,EACpB,YAAY,EACZ,cAAc,EACd,cAAc,EACd,QAAQ,EACR,aAAa,EACb,gBAAgB,EAChB,qBAAqB,EACrB,QAAQ,EACR,QAAQ,EACR,IAAI,EACL,MAAM,2BAA2B,CAAC;AACnC,OAAO,EAAC,iBAAiB,EAAC,MAAM,gCAAgC,CAAC;AACjE,OAAO,EAAC,qBAAqB,EAAC,MAAM,sBAAsB,CAAC;AAC3D,OAAO,EAAC,YAAY,EAAC,MAAM,2BAA2B,CAAC;AACvD,OAAO,EAAC,QAAQ,EAAE,YAAY,EAAC,MAAM,kBAAkB,CAAC;AACxD,OAAO,EAAC,oBAAoB,EAAC,MAAM,qCAAqC,CAAC;AACzE,OAAO,EAAC,gBAAgB,EAAC,MAAM,iCAAiC,CAAC;AACjE,OAAO,EAAC,cAAc,EAAE,YAAY,EAAE,mBAAmB,EAAE,aAAa,EAAC,MAAM,+BAA+B,CAAC;AAE/G,OAAO,EACL,QAAQ,EACR,QAAQ,EACR,IAAI,EACJ,iBAAiB,EACjB,YAAY,EACZ,QAAQ,EACR,qBAAqB,EACrB,WAAW,EACX,eAAe,EACf,cAAc,EACd,oBAAoB,EACpB,cAAc,EACd,qBAAqB,EACrB,UAAU,EACV,cAAc,EACd,UAAU,EACV,kBAAkB,EAClB,WAAW,EACX,mBAAmB,EACnB,kBAAkB,EAClB,iBAAiB,EACjB,aAAa,EACb,gBAAgB,EAChB,cAAc,EACd,YAAY,EACZ,mBAAmB,EACnB,aAAa,EACb,YAAY,EACZ,SAAS,EACT,mBAAmB,EACnB,gBAAgB,EAChB,YAAY,EACZ,QAAQ,EACR,gBAAgB,EAChB,oBAAoB,GACrB,CAAC"}
package/index.js CHANGED
@@ -1,7 +1,7 @@
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- import { AminoacidsPalettes } from './src/aminoacids';
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- import { NucleotidesPalettes } from './src/nucleotides';
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+ import { Aminoacids, AminoacidsPalettes } from './src/aminoacids';
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+ import { Nucleotides, NucleotidesPalettes } from './src/nucleotides';
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  import { SeqPaletteBase } from './src/seq-palettes';
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- import { UnknownSeqPalettes } from './src/unknown';
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+ import { UnknownSeqPalette, UnknownSeqPalettes } from './src/unknown';
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  import { DrawStyle, printLeftOrCentered } from './src/utils/cell-renderer';
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  import { FastaFileHandler } from './src/utils/fasta-handler';
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  import { getSplitter, splitterAsFasta, getSplitterForColumn, monomerToShort, splitterAsHelm, getStats, pickUpPalette, getPaletteByType, getAlphabetSimilarity } from './src/utils/macromolecule';
@@ -9,6 +9,6 @@ import { NotationConverter } from './src/utils/notation-converter';
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  import { splitAlignedSequences } from './src/utils/splitter';
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  import { UnitsHandler } from './src/utils/units-handler';
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  import { VdRegion, VdRegionType } from './src/vd-regions';
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- import { PositionInfo, PositionMonomerInfo, WebLogo } from './src/viewers/web-logo';
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- export { NotationConverter, getStats, getAlphabetSimilarity, getSplitter, splitterAsFasta, splitterAsHelm, getSplitterForColumn, monomerToShort, splitAlignedSequences, SeqPaletteBase, AminoacidsPalettes, NucleotidesPalettes, UnknownSeqPalettes, pickUpPalette, getPaletteByType, PositionInfo, PositionMonomerInfo, WebLogo, UnitsHandler, DrawStyle, printLeftOrCentered, FastaFileHandler, VdRegionType, VdRegion, };
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- //# sourceMappingURL=data:application/json;base64,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+ import { PositionHeight, PositionInfo, PositionMonomerInfo, WebLogoViewer } from './src/viewers/web-logo-viewer';
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+ export { NotationConverter, getStats, getAlphabetSimilarity, getSplitter, splitterAsFasta, splitterAsHelm, getSplitterForColumn, monomerToShort, splitAlignedSequences, SeqPaletteBase, Aminoacids, AminoacidsPalettes, Nucleotides, NucleotidesPalettes, UnknownSeqPalettes, UnknownSeqPalette, pickUpPalette, getPaletteByType, PositionHeight, PositionInfo, PositionMonomerInfo, WebLogoViewer, UnitsHandler, DrawStyle, printLeftOrCentered, FastaFileHandler, VdRegionType, VdRegion, };
14
+ //# sourceMappingURL=data:application/json;base64,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
package/index.ts CHANGED
@@ -1,7 +1,7 @@
1
- import {AminoacidsPalettes} from './src/aminoacids';
2
- import {NucleotidesPalettes} from './src/nucleotides';
1
+ import {Aminoacids, AminoacidsPalettes} from './src/aminoacids';
2
+ import {Nucleotides, NucleotidesPalettes} from './src/nucleotides';
3
3
  import {SeqPalette, SeqPaletteBase} from './src/seq-palettes';
4
- import {UnknownSeqPalettes} from './src/unknown';
4
+ import {UnknownSeqPalette, UnknownSeqPalettes} from './src/unknown';
5
5
  import {DrawStyle, printLeftOrCentered} from './src/utils/cell-renderer';
6
6
  import {FastaFileHandler} from './src/utils/fasta-handler';
7
7
  import {
@@ -25,7 +25,7 @@ import {UnitsHandler} from './src/utils/units-handler';
25
25
  import {VdRegion, VdRegionType} from './src/vd-regions';
26
26
  import {IPhylocanvasGlViewer} from './src/viewers/phylocanvas-gl-viewer';
27
27
  import {IVdRegionsViewer} from './src/viewers/vd-regions-viewer';
28
- import {PositionInfo, PositionMonomerInfo, WebLogo} from './src/viewers/web-logo';
28
+ import {PositionHeight, PositionInfo, PositionMonomerInfo, WebLogoViewer} from './src/viewers/web-logo-viewer';
29
29
 
30
30
  export {
31
31
  ALPHABET,
@@ -43,14 +43,18 @@ export {
43
43
  splitAlignedSequences,
44
44
  SeqPalette,
45
45
  SeqPaletteBase,
46
+ Aminoacids,
46
47
  AminoacidsPalettes,
48
+ Nucleotides,
47
49
  NucleotidesPalettes,
48
50
  UnknownSeqPalettes,
51
+ UnknownSeqPalette,
49
52
  pickUpPalette,
50
53
  getPaletteByType,
54
+ PositionHeight,
51
55
  PositionInfo,
52
56
  PositionMonomerInfo,
53
- WebLogo,
57
+ WebLogoViewer,
54
58
  UnitsHandler,
55
59
  DrawStyle,
56
60
  printLeftOrCentered,
package/package.json CHANGED
@@ -4,14 +4,15 @@
4
4
  "access": "public"
5
5
  },
6
6
  "friendlyName": "Datagrok bio library",
7
- "version": "5.1.1",
7
+ "version": "5.2.1",
8
8
  "description": "",
9
9
  "dependencies": {
10
10
  "@datagrok-libraries/utils": "^1.10.1",
11
- "@phylocanvas/phylocanvas.gl": "^1.44.0",
11
+ "@phylocanvas/phylocanvas.gl": "1.44.0",
12
12
  "cash-dom": "latest",
13
13
  "datagrok-api": "^1.7.0",
14
14
  "dayjs": "latest",
15
+ "deck.gl": "8.8.12",
15
16
  "rxjs": "^6.5.5",
16
17
  "wu": "latest"
17
18
  },
@@ -1,9 +1,8 @@
1
1
  import * as DG from 'datagrok-api/dg';
2
2
  import { SeqPalette } from '../seq-palettes';
3
- declare module 'datagrok-api/src/grid' {
4
- interface Rect {
5
- contains(x: number, y: number): boolean;
6
- }
3
+ export declare enum PositionHeight {
4
+ Entropy = "Entropy",
5
+ full = "100%"
7
6
  }
8
7
  declare global {
9
8
  interface HTMLCanvasElement {
@@ -34,7 +33,7 @@ export declare class PositionInfo {
34
33
  [m: string]: PositionMonomerInfo;
35
34
  }, rowCount?: number, sumForHeightCalc?: number);
36
35
  }
37
- export declare class WebLogo extends DG.JsViewer {
36
+ export declare class WebLogoViewer extends DG.JsViewer {
38
37
  static residuesSet: string;
39
38
  private static viewerCount;
40
39
  private readonly viewerId;
@@ -126,4 +125,4 @@ export declare class WebLogo extends DG.JsViewer {
126
125
  private calcSize;
127
126
  getAlphabetSize(): number;
128
127
  }
129
- //# sourceMappingURL=web-logo.d.ts.map
128
+ //# sourceMappingURL=web-logo-viewer.d.ts.map
@@ -0,0 +1 @@
1
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