@danielsimonjr/memoryjs 1.0.0

package/dist/search/VectorStore.js

@@ -0,0 +1,312 @@
+/**
+ * Vector Store
+ *
+ * Phase 4 Sprint 11: Vector storage and retrieval for semantic search.
+ * Provides in-memory and SQLite-backed implementations.
+ *
+ * @module search/VectorStore
+ */
+/**
+ * Calculate cosine similarity between two vectors.
+ *
+ * Uses an optimized inner loop without array methods for maximum performance.
+ *
+ * @param a - First vector
+ * @param b - Second vector
+ * @returns Cosine similarity score (0.0 to 1.0)
+ */
+export function cosineSimilarity(a, b) {
+    if (a.length !== b.length) {
+        throw new Error(`Vector dimensions mismatch: ${a.length} vs ${b.length}`);
+    }
+    let dotProduct = 0;
+    let magnitudeA = 0;
+    let magnitudeB = 0;
+    // Optimized single-pass loop
+    for (let i = 0; i < a.length; i++) {
+        const ai = a[i];
+        const bi = b[i];
+        dotProduct += ai * bi;
+        magnitudeA += ai * ai;
+        magnitudeB += bi * bi;
+    }
+    const magnitude = Math.sqrt(magnitudeA) * Math.sqrt(magnitudeB);
+    if (magnitude === 0) {
+        return 0;
+    }
+    // Clamp to [-1, 1] to handle floating point errors
+    const similarity = dotProduct / magnitude;
+    return Math.max(-1, Math.min(1, similarity));
+}
+/**
+ * In-Memory Vector Store
+ *
+ * Stores vectors in memory using a Map for O(1) add/remove operations.
+ * Search uses brute-force cosine similarity which is O(n) but fast for
+ * small to medium graphs (<10K entities).
+ *
+ * @example
+ * ```typescript
+ * const store = new InMemoryVectorStore();
+ * store.add("entity1", [0.1, 0.2, 0.3]);
+ * store.add("entity2", [0.4, 0.5, 0.6]);
+ * const results = store.search([0.1, 0.2, 0.3], 5);
+ * console.log(results); // [{ name: "entity1", score: 1.0 }, ...]
+ * ```
+ */
+export class InMemoryVectorStore {
+    /** Map of entity name to embedding vector */
+    vectors = new Map();
+    /**
+     * Add a vector for an entity.
+     *
+     * @param entityName - Name of the entity
+     * @param vector - Embedding vector
+     */
+    add(entityName, vector) {
+        this.vectors.set(entityName, vector);
+    }
+    /**
+     * Search for similar vectors using cosine similarity.
+     *
+     * @param queryVector - Query embedding vector
+     * @param k - Number of results to return
+     * @returns Array of results with entity name and similarity score
+     */
+    search(queryVector, k) {
+        if (this.vectors.size === 0) {
+            return [];
+        }
+        // Calculate similarity for all vectors
+        const results = [];
+        for (const [name, vector] of this.vectors) {
+            try {
+                const score = cosineSimilarity(queryVector, vector);
+                results.push({ name, score });
+            }
+            catch {
+                // Skip vectors with dimension mismatch
+                continue;
+            }
+        }
+        // Sort by score descending and take top k
+        results.sort((a, b) => b.score - a.score);
+        return results.slice(0, k);
+    }
+    /**
+     * Remove a vector by entity name.
+     *
+     * @param entityName - Name of the entity to remove
+     * @returns True if found and removed
+     */
+    remove(entityName) {
+        return this.vectors.delete(entityName);
+    }
+    /**
+     * Get the number of vectors stored.
+     *
+     * @returns Number of vectors
+     */
+    size() {
+        return this.vectors.size;
+    }
+    /**
+     * Clear all vectors from the store.
+     */
+    clear() {
+        this.vectors.clear();
+    }
+    /**
+     * Check if a vector exists for an entity.
+     *
+     * @param entityName - Name of the entity
+     * @returns True if vector exists
+     */
+    has(entityName) {
+        return this.vectors.has(entityName);
+    }
+    /**
+     * Get the vector for an entity.
+     *
+     * @param entityName - Name of the entity
+     * @returns Vector if found, undefined otherwise
+     */
+    get(entityName) {
+        return this.vectors.get(entityName);
+    }
+    /**
+     * Get all entity names with stored vectors.
+     *
+     * @returns Array of entity names
+     */
+    getEntityNames() {
+        return Array.from(this.vectors.keys());
+    }
+    /**
+     * Load vectors from an iterable source.
+     *
+     * @param entries - Iterable of [entityName, vector] pairs
+     */
+    loadFrom(entries) {
+        for (const [name, vector] of entries) {
+            this.vectors.set(name, vector);
+        }
+    }
+}
+/**
+ * SQLite Vector Store
+ *
+ * Persists vectors to SQLite storage while maintaining an in-memory cache
+ * for fast search operations. Combines persistence with performance.
+ *
+ * Uses SQLiteStorage's embedding storage methods for persistence.
+ *
+ * @example
+ * ```typescript
+ * const store = new SQLiteVectorStore(sqliteStorage);
+ * await store.initialize();
+ * store.add("entity1", [0.1, 0.2, 0.3]);
+ * const results = store.search([0.1, 0.2, 0.3], 5);
+ * ```
+ */
+export class SQLiteVectorStore {
+    /** In-memory cache for fast search */
+    memoryStore = new InMemoryVectorStore();
+    /** SQLite storage reference for persistence */
+    storage = null;
+    /** Whether the store has been initialized */
+    initialized = false;
+    /** Model name used for embeddings */
+    embeddingModel = '';
+    /**
+     * Create a SQLite vector store.
+     *
+     * @param storage - SQLite storage instance with embedding support
+     * @param embeddingModel - Model name used for embeddings
+     */
+    constructor(storage, embeddingModel = 'unknown') {
+        this.storage = storage || null;
+        this.embeddingModel = embeddingModel;
+    }
+    /**
+     * Initialize the store by loading vectors from SQLite.
+     */
+    async initialize() {
+        if (this.initialized)
+            return;
+        if (this.storage) {
+            // Load all embeddings from SQLite
+            const embeddings = await this.storage.loadAllEmbeddings();
+            this.memoryStore.loadFrom(embeddings);
+        }
+        this.initialized = true;
+    }
+    /**
+     * Add a vector for an entity.
+     * Stores in both memory and SQLite for persistence.
+     *
+     * @param entityName - Name of the entity
+     * @param vector - Embedding vector
+     */
+    add(entityName, vector) {
+        // Add to in-memory cache
+        this.memoryStore.add(entityName, vector);
+        // Persist to SQLite if available
+        if (this.storage) {
+            this.storage.storeEmbedding(entityName, vector, this.embeddingModel);
+        }
+    }
+    /**
+     * Search for similar vectors using cosine similarity.
+     *
+     * @param queryVector - Query embedding vector
+     * @param k - Number of results to return
+     * @returns Array of results with entity name and similarity score
+     */
+    search(queryVector, k) {
+        return this.memoryStore.search(queryVector, k);
+    }
+    /**
+     * Remove a vector by entity name.
+     *
+     * @param entityName - Name of the entity to remove
+     * @returns True if found and removed
+     */
+    remove(entityName) {
+        const removed = this.memoryStore.remove(entityName);
+        // Remove from SQLite if available
+        if (this.storage && removed) {
+            this.storage.removeEmbedding(entityName);
+        }
+        return removed;
+    }
+    /**
+     * Get the number of vectors stored.
+     *
+     * @returns Number of vectors
+     */
+    size() {
+        return this.memoryStore.size();
+    }
+    /**
+     * Clear all vectors from the store.
+     */
+    clear() {
+        this.memoryStore.clear();
+        if (this.storage) {
+            this.storage.clearAllEmbeddings();
+        }
+    }
+    /**
+     * Check if a vector exists for an entity.
+     *
+     * @param entityName - Name of the entity
+     * @returns True if vector exists
+     */
+    has(entityName) {
+        return this.memoryStore.has(entityName);
+    }
+    /**
+     * Get the vector for an entity.
+     *
+     * @param entityName - Name of the entity
+     * @returns Vector if found, undefined otherwise
+     */
+    get(entityName) {
+        return this.memoryStore.get(entityName);
+    }
+    /**
+     * Set the SQLite storage reference.
+     *
+     * @param storage - SQLite storage instance
+     */
+    setStorage(storage) {
+        this.storage = storage;
+    }
+    /**
+     * Set the embedding model name.
+     *
+     * @param model - Model name
+     */
+    setEmbeddingModel(model) {
+        this.embeddingModel = model;
+    }
+}
+/**
+ * Create a vector store based on storage type.
+ *
+ * @param storageType - Storage type: 'jsonl' or 'sqlite'
+ * @param storage - Optional SQLite storage reference for 'sqlite' type
+ * @param embeddingModel - Optional model name for embedding tracking
+ * @returns Vector store instance
+ */
+export function createVectorStore(storageType = 'jsonl', storage, embeddingModel) {
+    switch (storageType) {
+        case 'sqlite':
+            return new SQLiteVectorStore(storage, embeddingModel);
+        case 'jsonl':
+        default:
+            return new InMemoryVectorStore();
+    }
+}
+//# sourceMappingURL=VectorStore.js.map

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package/dist/search/index.d.ts

@@ -0,0 +1,35 @@
+/**
+ * Search Module Barrel Export
+ *
+ * Sprint 2: Added SearchFilterChain for centralized filter logic
+ * Phase 4 Sprint 10: Added EmbeddingService for semantic search
+ */
+export { BasicSearch } from './BasicSearch.js';
+export { RankedSearch } from './RankedSearch.js';
+export { BooleanSearch } from './BooleanSearch.js';
+export { FuzzySearch, type FuzzySearchOptions } from './FuzzySearch.js';
+export { SearchSuggestions } from './SearchSuggestions.js';
+export { SavedSearchManager } from './SavedSearchManager.js';
+export { SearchManager } from './SearchManager.js';
+export { SearchFilterChain, type SearchFilters, type ValidatedPagination } from './SearchFilterChain.js';
+export { OpenAIEmbeddingService, LocalEmbeddingService, MockEmbeddingService, createEmbeddingService, l2Normalize, QUERY_PREFIX, DOCUMENT_PREFIX, type EmbeddingProgressCallback, } from './EmbeddingService.js';
+export { EmbeddingCache, DEFAULT_EMBEDDING_CACHE_OPTIONS, type EmbeddingCacheStats, type EmbeddingCacheOptions, } from './EmbeddingCache.js';
+export { IncrementalIndexer, DEFAULT_INDEXER_OPTIONS, type IndexOperationType, type IndexOperation, type IncrementalIndexerOptions, type FlushResult, } from './IncrementalIndexer.js';
+export { InMemoryVectorStore, SQLiteVectorStore, createVectorStore, cosineSimilarity, type SQLiteStorageWithEmbeddings, } from './VectorStore.js';
+export { SemanticSearch, entityToText, } from './SemanticSearch.js';
+export { TFIDFIndexManager } from './TFIDFIndexManager.js';
+export { TFIDFEventSync } from './TFIDFEventSync.js';
+export { QueryCostEstimator, type SearchLayer, type ExtendedQueryCostEstimate, type LayerRecommendationOptions, type TokenEstimationOptions, type AdaptiveDepthConfig, } from './QueryCostEstimator.js';
+export { SymbolicSearch, type SymbolicResult } from './SymbolicSearch.js';
+export { HybridSearchManager, DEFAULT_HYBRID_WEIGHTS } from './HybridSearchManager.js';
+export { QueryAnalyzer } from './QueryAnalyzer.js';
+export { QueryPlanner } from './QueryPlanner.js';
+export { ReflectionManager, type ReflectionOptions, type ReflectionResult, type RefinementHistoryEntry, } from './ReflectionManager.js';
+export { BM25Search, STOPWORDS, DEFAULT_BM25_CONFIG, type BM25DocumentEntry, type BM25Index, type BM25Config, } from './BM25Search.js';
+export { OptimizedInvertedIndex, type IndexMemoryUsage, type PostingListResult, } from './OptimizedInvertedIndex.js';
+export { HybridScorer, DEFAULT_SCORER_WEIGHTS, type SemanticLayerResult, type LexicalSearchResult, type SymbolicSearchResult, type ScoredResult, type HybridWeights, type HybridScorerOptions, } from './HybridScorer.js';
+export { ParallelSearchExecutor, type LayerTiming, type ParallelSearchResult, type ParallelSearchOptions, } from './ParallelSearchExecutor.js';
+export { EarlyTerminationManager, type AdequacyCheck, type EarlyTerminationOptions, type EarlyTerminationResult, } from './EarlyTerminationManager.js';
+export { QueryPlanCache, type CachedQueryEntry, type QueryPlanCacheStats, type QueryPlanCacheOptions, } from './QueryPlanCache.js';
+export { QuantizedVectorStore, type QuantizationParams, type QuantizedVectorStoreStats, type QuantizedSearchResult, type QuantizedVectorStoreOptions, } from './QuantizedVectorStore.js';
+//# sourceMappingURL=index.d.ts.map

package/dist/search/index.d.ts.map

@@ -0,0 +1 @@
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package/dist/search/index.js

@@ -0,0 +1,53 @@
+/**
+ * Search Module Barrel Export
+ *
+ * Sprint 2: Added SearchFilterChain for centralized filter logic
+ * Phase 4 Sprint 10: Added EmbeddingService for semantic search
+ */
+export { BasicSearch } from './BasicSearch.js';
+export { RankedSearch } from './RankedSearch.js';
+export { BooleanSearch } from './BooleanSearch.js';
+export { FuzzySearch } from './FuzzySearch.js';
+export { SearchSuggestions } from './SearchSuggestions.js';
+export { SavedSearchManager } from './SavedSearchManager.js';
+export { SearchManager } from './SearchManager.js';
+// Sprint 2: Search Filter Chain utilities
+export { SearchFilterChain } from './SearchFilterChain.js';
+// Phase 4 Sprint 10: Embedding Service for semantic search
+// Phase 12 Sprint 5: Added l2Normalize, prefixes, and progress callback
+export { OpenAIEmbeddingService, LocalEmbeddingService, MockEmbeddingService, createEmbeddingService, l2Normalize, QUERY_PREFIX, DOCUMENT_PREFIX, } from './EmbeddingService.js';
+// Phase 12 Sprint 5: Embedding Cache with LRU eviction
+export { EmbeddingCache, DEFAULT_EMBEDDING_CACHE_OPTIONS, } from './EmbeddingCache.js';
+// Phase 12 Sprint 5: Incremental Indexer for batch updates
+export { IncrementalIndexer, DEFAULT_INDEXER_OPTIONS, } from './IncrementalIndexer.js';
+// Phase 4 Sprint 11: Vector Store for semantic search
+export { InMemoryVectorStore, SQLiteVectorStore, createVectorStore, cosineSimilarity, } from './VectorStore.js';
+// Phase 4 Sprint 12: Semantic Search Manager
+export { SemanticSearch, entityToText, } from './SemanticSearch.js';
+// Phase 10 Sprint 3: TF-IDF Index Manager and Event Sync
+export { TFIDFIndexManager } from './TFIDFIndexManager.js';
+export { TFIDFEventSync } from './TFIDFEventSync.js';
+// Phase 10 Sprint 4: Query Cost Estimation
+// Phase 12 Sprint 4: Enhanced with adaptive depth, token estimation, layer recommendations
+export { QueryCostEstimator, } from './QueryCostEstimator.js';
+// Phase 11 Sprint 1: Hybrid Search
+export { SymbolicSearch } from './SymbolicSearch.js';
+export { HybridSearchManager, DEFAULT_HYBRID_WEIGHTS } from './HybridSearchManager.js';
+// Phase 11 Sprint 3: Query Analysis
+export { QueryAnalyzer } from './QueryAnalyzer.js';
+export { QueryPlanner } from './QueryPlanner.js';
+// Phase 11 Sprint 4: Reflection-based Retrieval
+// Phase 12 Sprint 4: Enhanced with progressive limits, focused refinement, history tracking
+export { ReflectionManager, } from './ReflectionManager.js';
+// Phase 12 Sprint 3: Search Algorithm Optimization
+export { BM25Search, STOPWORDS, DEFAULT_BM25_CONFIG, } from './BM25Search.js';
+export { OptimizedInvertedIndex, } from './OptimizedInvertedIndex.js';
+export { HybridScorer, DEFAULT_SCORER_WEIGHTS, } from './HybridScorer.js';
+// Phase 12 Sprint 2: Parallel Search Execution
+export { ParallelSearchExecutor, } from './ParallelSearchExecutor.js';
+// Phase 12 Sprint 4: Query Execution Optimization
+export { EarlyTerminationManager, } from './EarlyTerminationManager.js';
+export { QueryPlanCache, } from './QueryPlanCache.js';
+// Phase 12 Sprint 6: Quantized Vector Store
+export { QuantizedVectorStore, } from './QuantizedVectorStore.js';
+//# sourceMappingURL=index.js.map

package/dist/search/index.js.map

@@ -0,0 +1 @@
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package/dist/types/index.d.ts

@@ -0,0 +1,13 @@
+/**
+ * Types Module - Barrel Export
+ *
+ * Central export point for all type definitions used throughout the
+ * Memory MCP Server. All types are consolidated in types.ts (Phase 5 cleanup).
+ *
+ * @example
+ * ```typescript
+ * import { Entity, Relation, KnowledgeGraph, SearchResult } from './types/index.js';
+ * ```
+ */
+export type { Entity, Relation, KnowledgeGraph, ReadonlyKnowledgeGraph, SearchResult, SavedSearch, BooleanQueryNode, DocumentVector, TFIDFIndex, FuzzyCacheKey, BooleanCacheEntry, PaginatedCacheEntry, TokenizedEntity, GraphStats, ValidationReport, ValidationIssue, ValidationWarning, CacheCompressionStats, ArchiveResultExtended, ExportFilter, ExportOptions, ExportResult, ImportResult, GraphCompressionResult, BackupOptions, BackupResult, RestoreResult, BackupMetadataExtended, BackupInfoExtended, TagAlias, IGraphStorage, StorageConfig, LowercaseData, TraversalOptions, TraversalResult, PathResult, ConnectedComponentsResult, CentralityResult, WeightedRelation, EmbeddingMode, EmbeddingService, SemanticSearchResult, IVectorStore, VectorSearchResult, EmbeddingConfig, SemanticIndexOptions, LongRunningOperationOptions, BatchOperationType, BatchOperation, BatchResult, BatchOptions, GraphEventType, GraphEventBase, EntityCreatedEvent, EntityUpdatedEvent, EntityDeletedEvent, RelationCreatedEvent, RelationDeletedEvent, ObservationAddedEvent, ObservationDeletedEvent, GraphSavedEvent, GraphLoadedEvent, GraphEvent, GraphEventListener, GraphEventMap, SearchMethod, QueryCostEstimate, AutoSearchResult, QueryCostEstimatorOptions, PreparedEntity, SymbolicFilters, HybridSearchOptions, HybridSearchResult, ExtractedEntity, TemporalRange, QueryAnalysis, SubQuery, QueryPlan, } from './types.js';
+//# sourceMappingURL=index.d.ts.map

package/dist/types/index.d.ts.map

@@ -0,0 +1 @@
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package/dist/types/index.js

@@ -0,0 +1,13 @@
+/**
+ * Types Module - Barrel Export
+ *
+ * Central export point for all type definitions used throughout the
+ * Memory MCP Server. All types are consolidated in types.ts (Phase 5 cleanup).
+ *
+ * @example
+ * ```typescript
+ * import { Entity, Relation, KnowledgeGraph, SearchResult } from './types/index.js';
+ * ```
+ */
+export {};
+//# sourceMappingURL=index.js.map

package/dist/types/index.js.map

@@ -0,0 +1 @@
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