@cyberismo/data-handler 0.0.2

package/dist/command-manager.js

@@ -0,0 +1,73 @@
+/**
+    Cyberismo
+    Copyright © Cyberismo Ltd and contributors 2024
+
+    This program is free software: you can redistribute it and/or modify it under the terms of the GNU Affero General Public License version 3 as published by the Free Software Foundation.
+
+    This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more details.
+
+    You should have received a copy of the GNU Affero General Public
+    License along with this program.  If not, see <https://www.gnu.org/licenses/>.
+*/
+import { Calculate, Create, Edit, Export, ExportSite, Import, Move, Remove, Rename, Show, Transition, Update, Validate, } from './commands/index.js';
+import { Project } from './containers/project.js';
+// Handles commands and ensures that no extra instances are created.
+export class CommandManager {
+    static instance;
+    project;
+    calculateCmd;
+    createCmd;
+    editCmd;
+    exportSiteCmd;
+    exportCmd;
+    importCmd;
+    moveCmd;
+    removeCmd;
+    renameCmd;
+    showCmd;
+    transitionCmd;
+    updateCmd;
+    validateCmd;
+    constructor(path) {
+        this.project = new Project(path);
+        this.validateCmd = Validate.getInstance();
+        this.showCmd = new Show(this.project);
+        this.calculateCmd = new Calculate(this.project);
+        this.createCmd = new Create(this.project, this.calculateCmd);
+        this.editCmd = new Edit(this.project, this.calculateCmd);
+        this.exportCmd = new Export(this.project, this.calculateCmd, this.showCmd);
+        this.exportSiteCmd = new ExportSite(this.project, this.calculateCmd, this.showCmd);
+        this.importCmd = new Import(this.project, this.createCmd);
+        this.moveCmd = new Move(this.project, this.calculateCmd);
+        this.removeCmd = new Remove(this.project, this.calculateCmd);
+        this.renameCmd = new Rename(this.project, this.calculateCmd);
+        this.transitionCmd = new Transition(this.project, this.calculateCmd);
+        this.updateCmd = new Update(this.project);
+    }
+    /**
+     * Some commands needs initialization that cannot be performed inside constructor.
+     * Add such calls here.
+     */
+    async initialize() {
+        await this.project.collectModuleResources();
+    }
+    /**
+     * Either creates a new instance, or passes the current one.
+     * New instance is created, if path differs, or there is no previous instance.
+     * @param path Project path.
+     * @returns Instance of this class.
+     */
+    static async getInstance(path) {
+        if (CommandManager.instance &&
+            CommandManager.instance.project.basePath !== path) {
+            CommandManager.instance = new CommandManager(path);
+            await CommandManager.instance.initialize();
+        }
+        if (!CommandManager.instance) {
+            CommandManager.instance = new CommandManager(path);
+            await CommandManager.instance.initialize();
+        }
+        return CommandManager.instance;
+    }
+}
+//# sourceMappingURL=command-manager.js.map

package/dist/command-manager.js.map

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package/dist/commands/calculate.d.ts

@@ -0,0 +1,86 @@
+/**
+  Cyberismo
+  Copyright © Cyberismo Ltd and contributors 2024
+  This program is free software: you can redistribute it and/or modify it under
+  the terms of the GNU Affero General Public License version 3 as published by
+  the Free Software Foundation.
+  This program is distributed in the hope that it will be useful, but WITHOUT
+  ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
+  FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more
+  details. You should have received a copy of the GNU Affero General Public
+  License along with this program. If not, see <https://www.gnu.org/licenses/>.
+*/
+import type { BaseResult, ParseResult, QueryName, QueryResult } from '../types/queries.js';
+import type { Card } from '../interfaces/project-interfaces.js';
+import { type Project } from '../containers/project.js';
+export declare class Calculate {
+    private project;
+    private static mutex;
+    private pythonBinary;
+    constructor(project: Project);
+    private logicProgram;
+    private modules;
+    private modulesInitialized;
+    private initializeModules;
+    private creationQuery;
+    private generateCardTreeContent;
+    private generateCardTypes;
+    private generateFieldTypes;
+    private generateLinkTypes;
+    private generateModules;
+    private generateCalculations;
+    private generateReports;
+    private generateTemplates;
+    private generateWorkFlows;
+    private getCards;
+    private parseClingoResult;
+    private run;
+    /**
+     * Generates a logic program.
+     * @param cardKey Optional, sub-card tree defining card
+     */
+    generate(cardKey?: string): Promise<void>;
+    /**
+     * When card changes, update the card specific calculations.
+     * @param changedCard Card that was changed.
+     */
+    handleCardChanged(changedCard: Card): Promise<{
+        statusCode: number;
+    }>;
+    /**
+     * When cards are removed, automatically remove card-specific calculations.
+     * @param deletedCard Card that is to be removed.
+     */
+    handleDeleteCard(deletedCard: Card): Promise<void>;
+    /**
+     * When new cards are added, automatically calculate card-specific values.
+     * @param cards Added cards.
+     */
+    handleNewCards(cards: Card[]): Promise<void>;
+    /**
+     * Runs given logic program and creates a graph using clingraph
+     * @param data Provide a query or/and a file which can be given to clingraph
+     * @param timeout Maximum amount of milliseconds clingraph is allowed to run
+     * @returns a base64 encoded image as a string
+     */
+    runGraph(data: {
+        query?: string;
+        file?: string;
+    }, timeout?: number): Promise<string>;
+    /**
+     * Runs a logic program using clingo.
+     * @param filePath Path to a query file to be run in relation to current working directory
+     * @returns parsed program output
+     */
+    runLogicProgram(data: {
+        query?: string;
+        file?: string;
+    }): Promise<ParseResult<BaseResult>>;
+    /**
+     * Runs a pre-defined query.
+     * @param queryName Name of the query file without extension
+     * @param options Any object that contains state for handlebars
+     * @returns parsed program output
+     */
+    runQuery<T extends QueryName>(queryName: T, options?: unknown): Promise<QueryResult<T>[]>;
+}

package/dist/commands/calculate.js

@@ -0,0 +1,444 @@
+/**
+  Cyberismo
+  Copyright © Cyberismo Ltd and contributors 2024
+  This program is free software: you can redistribute it and/or modify it under
+  the terms of the GNU Affero General Public License version 3 as published by
+  the Free Software Foundation.
+  This program is distributed in the hope that it will be useful, but WITHOUT
+  ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
+  FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more
+  details. You should have received a copy of the GNU Affero General Public
+  License along with this program. If not, see <https://www.gnu.org/licenses/>.
+*/
+// node
+import { basename, join, resolve } from 'node:path';
+import { readFile, rm } from 'node:fs/promises';
+import { spawnSync } from 'node:child_process';
+import { sanitizeSvgBase64 } from '../utils/sanitize-svg.js';
+import ClingoParser from '../utils/clingo-parser.js';
+import { pathExists } from '../utils/file-utils.js';
+import { Mutex } from 'async-mutex';
+import Handlebars from 'handlebars';
+import { ResourcesFrom } from '../containers/project.js';
+import { flattenCardArray } from '../utils/card-utils.js';
+import { logger } from '../utils/log-utils.js';
+import { createCardFacts, createCardTypeFacts, createFieldTypeFacts, createLinkTypeFacts, createModuleFacts, createProjectFacts, createReportFacts, createTemplateFacts, createWorkflowFacts, } from '../utils/clingo-facts.js';
+import { CardMetadataUpdater } from '../card-metadata-updater.js';
+import { generateRandomString } from '../utils/random.js';
+import { solve, setBaseProgram } from '@cyberismocom/node-clingo';
+import { lpFiles } from '@cyberismocom/resources';
+// Define names for the base programs
+const BASE_PROGRAM_KEY = 'base';
+const QUERY_LANGUAGE_KEY = 'queryLanguage';
+// Class that calculates with logic program card / project level calculations.
+export class Calculate {
+    project;
+    static mutex = new Mutex();
+    pythonBinary = 'python';
+    constructor(project) {
+        this.project = project;
+    }
+    // Storage for in-memory program content
+    logicProgram = '';
+    modules = '';
+    modulesInitialized = false;
+    // Initialize modules during construction
+    async initializeModules() {
+        try {
+            // Collect all available calculations at initialization time
+            const modules = await this.generateModules();
+            this.modules = modules; // Store initial modules in logicProgram
+        }
+        catch (error) {
+            logger.error(`Failed to initialize modules: ${error}`);
+        }
+    }
+    // Wrapper to run onCreation query.
+    async creationQuery(cardKeys) {
+        if (!cardKeys)
+            return undefined;
+        return this.runQuery('onCreation', {
+            cardKeys,
+        });
+    }
+    // Generate card tree content
+    async generateCardTreeContent(parentCard) {
+        const cards = await this.getCards(parentCard);
+        let content = '% SECTION: CARDS_START\n';
+        for (const card of cards) {
+            const cardContent = await createCardFacts(card, this.project);
+            content += `% SECTION: CARD_${card.key}_START\n`;
+            content += `% Card ${card.key}\n`;
+            content += `${cardContent}\n`;
+            content += `% SECTION: CARD_${card.key}_END\n\n`;
+        }
+        content += '% SECTION: CARDS_END';
+        return content;
+    }
+    //
+    async generateCardTypes() {
+        const cardTypes = await this.project.cardTypes();
+        let content = '';
+        for (const cardType of await Promise.all(cardTypes.map((c) => this.project.resource(c.name)))) {
+            if (!cardType)
+                continue;
+            const cardTypeContent = createCardTypeFacts(cardType);
+            content += `% CardType ${cardType.name}\n${cardTypeContent}\n\n`;
+        }
+        return content;
+    }
+    //
+    async generateFieldTypes() {
+        const fieldTypes = await this.project.fieldTypes();
+        let content = '';
+        for (const fieldType of await Promise.all(fieldTypes.map((m) => this.project.resource(m.name)))) {
+            if (!fieldType)
+                continue;
+            const fieldTypeContent = createFieldTypeFacts(fieldType);
+            content += `% FieldType ${fieldType.name}\n${fieldTypeContent}\n\n`;
+        }
+        return content;
+    }
+    // Collects all linkTypes from the project
+    async generateLinkTypes() {
+        const linkTypes = await this.project.linkTypes();
+        let content = '';
+        for (const linkType of await Promise.all(linkTypes.map((c) => this.project.resource(c.name)))) {
+            if (!linkType)
+                continue;
+            const linkTypeContent = createLinkTypeFacts(linkType);
+            content += `% LinkType ${linkType.name}\n${linkTypeContent}\n\n`;
+        }
+        return content;
+    }
+    // Generates logic programs related to modules (and project itself).
+    async generateModules() {
+        const modules = await this.project.modules();
+        let content = '';
+        for (const module of await Promise.all(modules.map((mod) => this.project.module(mod.name)))) {
+            if (!module)
+                continue;
+            const moduleContent = createModuleFacts(module);
+            content = content.concat(moduleContent);
+        }
+        const projectContent = createProjectFacts(this.project.projectPrefix);
+        content = content.concat(projectContent);
+        return content;
+    }
+    // Collects all logic calculation files from project (local and imported modules)
+    async generateCalculations() {
+        // Collect all available calculations
+        const calculations = await this.project.calculations(ResourcesFrom.all);
+        let content = '% SECTION: MODULES_START\n';
+        // Process modules content
+        for (const calculationFile of calculations) {
+            if (calculationFile.path) {
+                const moduleLogicFile = resolve(join(calculationFile.path, basename(calculationFile.name)));
+                const filePath = moduleLogicFile.endsWith('.lp')
+                    ? moduleLogicFile
+                    : moduleLogicFile + '.lp';
+                if (pathExists(filePath)) {
+                    try {
+                        const moduleContent = await readFile(filePath, 'utf-8');
+                        content += `% SECTION: MODULE_${calculationFile.name}_START\n`;
+                        content += `% Module ${calculationFile.name}\n`;
+                        content += `${moduleContent}\n`;
+                        content += `% SECTION: MODULE_${calculationFile.name}_END\n\n`;
+                    }
+                    catch (error) {
+                        logger.warn(`Failed to read module ${calculationFile.name}: ${error}`);
+                    }
+                }
+            }
+        }
+        content += '% SECTION: MODULES_END';
+        return content;
+    }
+    // Generates logic programs related to reports.
+    async generateReports() {
+        const reports = await this.project.reports();
+        let content = '';
+        for (const report of await Promise.all(reports.map((r) => this.project.resource(r.name)))) {
+            if (!report)
+                continue;
+            content += createReportFacts(report);
+        }
+        return content;
+    }
+    // Generates logic programs related to templates (including their cards).
+    async generateTemplates() {
+        const templates = await this.project.templates();
+        let content = '';
+        for (const template of await Promise.all(templates.map((r) => this.project.resource(r.name)))) {
+            if (!template)
+                continue;
+            let templateContent = createTemplateFacts(template);
+            const cards = await this.getCards(undefined, template.name);
+            for (const card of cards) {
+                const cardContent = await createCardFacts(card, this.project);
+                templateContent = templateContent.concat(cardContent);
+            }
+            content = content.concat(templateContent);
+        }
+        return content;
+    }
+    //
+    async generateWorkFlows() {
+        const workflows = await this.project.workflows();
+        let content = '';
+        // loop through workflows
+        for (const workflow of await Promise.all(workflows.map((m) => this.project.resource(m.name)))) {
+            if (!workflow)
+                continue;
+            const workflowContent = createWorkflowFacts(workflow);
+            content += `% Workflow ${workflow.name}\n${workflowContent}\n\n`;
+        }
+        return content;
+    }
+    // Gets either all the cards (no parent), or a subtree.
+    async getCards(card, templateName) {
+        let cards = [];
+        if (!card) {
+            return templateName
+                ? this.project.templateCards(templateName)
+                : this.project.cards();
+        }
+        if (card.children) {
+            cards = flattenCardArray(card.children);
+        }
+        card.children = [];
+        cards.unshift(card);
+        return cards;
+    }
+    // Checks that Clingo successfully returned result.
+    async parseClingoResult(data) {
+        const parser = new ClingoParser();
+        return parser.parseInput(data.join('\n'));
+    }
+    //
+    async run(data, argMode = 'query') {
+        if (!data.query) {
+            throw new Error('Must provide query to run a clingo program');
+        }
+        const res = await Calculate.mutex.runExclusive(async () => {
+            // For queries, use both base and queryLanguage
+            const basePrograms = argMode === 'query'
+                ? [BASE_PROGRAM_KEY, QUERY_LANGUAGE_KEY]
+                : BASE_PROGRAM_KEY;
+            // Then solve with the program - need to pass the program as parameter
+            return solve(data.query, basePrograms);
+        });
+        logger.trace({
+            query: data.query,
+        }, `Ran Clingo solve command`);
+        if (res && res.answers && res.answers.length > 0) {
+            logger.trace({
+                result: res.answers,
+            });
+            return res.answers;
+        }
+        throw new Error('Failed to run Clingo solve. No answers returned.');
+    }
+    /**
+     * Generates a logic program.
+     * @param cardKey Optional, sub-card tree defining card
+     */
+    async generate(cardKey) {
+        await Calculate.mutex.runExclusive(async () => {
+            if (!this.modulesInitialized) {
+                await this.initializeModules();
+                this.modulesInitialized = true;
+            }
+            let card;
+            if (cardKey) {
+                card = await this.project.findSpecificCard(cardKey, {
+                    metadata: true,
+                    children: true,
+                    content: false,
+                    parent: false,
+                });
+                if (!card) {
+                    throw new Error(`Card '${cardKey}' not found`);
+                }
+            }
+            const calculations = await this.generateCalculations();
+            const cardTreeContent = await this.generateCardTreeContent(card);
+            const workFlows = await this.generateWorkFlows();
+            const cardTypes = await this.generateCardTypes();
+            const fieldTypes = await this.generateFieldTypes();
+            const linkTypes = await this.generateLinkTypes();
+            const reports = await this.generateReports();
+            const templates = await this.generateTemplates();
+            // Combine all resources
+            const resourcesProgram = '% SECTION: RESOURCES_START\n' +
+                calculations +
+                workFlows +
+                cardTypes +
+                fieldTypes +
+                linkTypes +
+                reports +
+                templates +
+                '% SECTION: RESOURCES_END';
+            // Create base program content
+            const baseProgram = '% SECTION: BASE_START\n' +
+                lpFiles.common.base +
+                '\n% SECTION: BASE_END\n\n' +
+                this.modules +
+                '\n\n' +
+                cardTreeContent +
+                '\n\n' +
+                resourcesProgram;
+            // Set the base programs separately
+            setBaseProgram(baseProgram, BASE_PROGRAM_KEY);
+            setBaseProgram('% SECTION: QUERY_LANGUAGE_START\n' +
+                lpFiles.common.queryLanguage +
+                '\n% SECTION: QUERY_LANGUAGE_END', QUERY_LANGUAGE_KEY);
+            // Also store the base program (without query language) for updates
+            this.logicProgram = baseProgram;
+        });
+    }
+    /**
+     * When card changes, update the card specific calculations.
+     * @param changedCard Card that was changed.
+     */
+    async handleCardChanged(changedCard) {
+        await this.generate(changedCard.key);
+        return { statusCode: 200 };
+    }
+    /**
+     * When cards are removed, automatically remove card-specific calculations.
+     * @param deletedCard Card that is to be removed.
+     */
+    async handleDeleteCard(deletedCard) {
+        if (!deletedCard) {
+            return;
+        }
+        await Calculate.mutex.runExclusive(async () => {
+            const affectedCards = await this.getCards(deletedCard);
+            // Filter out deleted cards' content from the cardsProgram string
+            for (const card of affectedCards) {
+                // Remove card-specific content from the in-memory program using section markers
+                const cardSectionPattern = new RegExp(`% SECTION: CARD_${card.key}_START[\\s\\S]*?% SECTION: CARD_${card.key}_END\\n\\n`, 'g');
+                this.logicProgram = this.logicProgram.replace(cardSectionPattern, '');
+            }
+            // Update the base program after modifying logicProgram
+            setBaseProgram(this.logicProgram, BASE_PROGRAM_KEY);
+        });
+    }
+    /**
+     * When new cards are added, automatically calculate card-specific values.
+     * @param cards Added cards.
+     */
+    async handleNewCards(cards) {
+        if (!cards) {
+            return;
+        }
+        // Only proceed if we already have a logic program
+        if (!this.logicProgram) {
+            return;
+        }
+        await Calculate.mutex.runExclusive(async () => {
+            // Generate content for all cards (including new ones)
+            const cardTreeContent = await this.generateCardTreeContent(undefined);
+            // Update the main logic program with the new cards program
+            if (this.logicProgram.includes('% SECTION: CARDS_START') &&
+                this.logicProgram.includes('% SECTION: CARDS_END')) {
+                this.logicProgram = this.logicProgram.replace(/% SECTION: CARDS_START[\s\S]*?% SECTION: CARDS_END/, cardTreeContent);
+            }
+            // Update the base program after modifying logicProgram
+            setBaseProgram(this.logicProgram, BASE_PROGRAM_KEY);
+        });
+        const cardKeys = cards.map((item) => item.key);
+        const queryResult = await this.creationQuery(cardKeys);
+        if (!queryResult ||
+            queryResult.at(0) === undefined ||
+            queryResult.at(0)?.updateFields === undefined) {
+            return;
+        }
+        const fieldsToUpdate = queryResult.at(0).updateFields;
+        await CardMetadataUpdater.apply(this.project, fieldsToUpdate);
+    }
+    /**
+     * Runs given logic program and creates a graph using clingraph
+     * @param data Provide a query or/and a file which can be given to clingraph
+     * @param timeout Maximum amount of milliseconds clingraph is allowed to run
+     * @returns a base64 encoded image as a string
+     */
+    async runGraph(data, timeout) {
+        const clingoOutput = await this.run(data, 'graph');
+        // unlikely we ever get a collision
+        const randomId = generateRandomString(36, 20);
+        const clingGraphArgs = [
+            '--out=render',
+            '--format=svg',
+            '--type=digraph',
+            `--name-format=${randomId}`,
+            `--dir=${this.project.paths.tempFolder}`,
+        ];
+        // python is only used for windows
+        const pythonArgs = [
+            '-c',
+            `from clingraph import main; import sys; sys.argv = ["sys.argv[0]", ${clingGraphArgs
+                .map((arg) => `'${arg.replace(/\\/g, '\\\\')}'`)
+                .join(',')}]; sys.exit(main())`,
+        ];
+        const clingraph = spawnSync(this.pythonBinary, pythonArgs, {
+            encoding: 'utf8',
+            // below looks like it could be replaced by just joining dots, but
+            // it breaks it because elements contain newlines, which must be
+            // replaced by dots
+            input: clingoOutput.join('\n').replaceAll('\n', '.') + '.',
+            timeout,
+            maxBuffer: 1024 * 1024 * 100,
+        });
+        if (clingraph.status !== 0) {
+            throw new Error(`Graph: Failed to run clingraph ${clingraph.stderr}`);
+        }
+        const filePath = join(this.project.paths.tempFolder, randomId);
+        let fileData;
+        try {
+            fileData = await readFile(filePath + '.svg');
+        }
+        catch (e) {
+            throw new Error(`Graph: Failed to read image file after generating graph: ${e}`);
+        }
+        finally {
+            await rm(filePath, { force: true });
+            await rm(filePath + '.svg', { force: true });
+        }
+        // Sanitizing SVG before returning it
+        return sanitizeSvgBase64(fileData);
+    }
+    /**
+     * Runs a logic program using clingo.
+     * @param filePath Path to a query file to be run in relation to current working directory
+     * @returns parsed program output
+     */
+    async runLogicProgram(data) {
+        const clingoOutput = await this.run(data);
+        return this.parseClingoResult(clingoOutput);
+    }
+    /**
+     * Runs a pre-defined query.
+     * @param queryName Name of the query file without extension
+     * @param options Any object that contains state for handlebars
+     * @returns parsed program output
+     */
+    async runQuery(queryName, options) {
+        let content = lpFiles.queries[queryName];
+        if (options && typeof options === 'object') {
+            const handlebars = Handlebars.create();
+            const compiled = handlebars.compile(content);
+            content = compiled(options);
+        }
+        const clingoOutput = await this.run({
+            query: content,
+        }, 'query');
+        const result = await this.parseClingoResult(clingoOutput);
+        if (result.error) {
+            throw new Error(result.error);
+        }
+        return result.results;
+    }
+}
+//# sourceMappingURL=calculate.js.map

package/dist/commands/calculate.js.map

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