@cyanheads/pubmed-mcp-server 1.4.1 → 1.4.3
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +5 -2
- package/dist/config/index.d.ts +2 -0
- package/dist/config/index.d.ts.map +1 -1
- package/dist/config/index.js +9 -1
- package/dist/config/index.js.map +1 -1
- package/dist/mcp-server/server.d.ts +13 -0
- package/dist/mcp-server/server.d.ts.map +1 -1
- package/dist/mcp-server/server.js +24 -6
- package/dist/mcp-server/server.js.map +1 -1
- package/dist/mcp-server/tools/pubmedArticleConnections/logic/citationFormatter.d.ts.map +1 -1
- package/dist/mcp-server/tools/pubmedArticleConnections/logic/citationFormatter.js +7 -5
- package/dist/mcp-server/tools/pubmedArticleConnections/logic/citationFormatter.js.map +1 -1
- package/dist/mcp-server/tools/pubmedArticleConnections/logic/elinkHandler.d.ts.map +1 -1
- package/dist/mcp-server/tools/pubmedArticleConnections/logic/elinkHandler.js +7 -7
- package/dist/mcp-server/tools/pubmedArticleConnections/logic/elinkHandler.js.map +1 -1
- package/dist/mcp-server/tools/pubmedArticleConnections/registration.js.map +1 -1
- package/dist/mcp-server/tools/pubmedFetchContents/logic.d.ts.map +1 -1
- package/dist/mcp-server/tools/pubmedFetchContents/logic.js +2 -1
- package/dist/mcp-server/tools/pubmedFetchContents/logic.js.map +1 -1
- package/dist/mcp-server/tools/pubmedFetchContents/registration.js.map +1 -1
- package/dist/mcp-server/tools/pubmedGenerateChart/logic.d.ts.map +1 -1
- package/dist/mcp-server/tools/pubmedGenerateChart/logic.js +10 -6
- package/dist/mcp-server/tools/pubmedGenerateChart/logic.js.map +1 -1
- package/dist/mcp-server/tools/pubmedGenerateChart/registration.js.map +1 -1
- package/dist/mcp-server/tools/pubmedResearchAgent/logic/planOrchestrator.d.ts.map +1 -1
- package/dist/mcp-server/tools/pubmedResearchAgent/logic/planOrchestrator.js +7 -4
- package/dist/mcp-server/tools/pubmedResearchAgent/logic/planOrchestrator.js.map +1 -1
- package/dist/mcp-server/tools/pubmedResearchAgent/registration.js.map +1 -1
- package/dist/mcp-server/tools/pubmedSearchArticles/logic.d.ts +2 -2
- package/dist/mcp-server/tools/pubmedSearchArticles/logic.d.ts.map +1 -1
- package/dist/mcp-server/tools/pubmedSearchArticles/logic.js +5 -3
- package/dist/mcp-server/tools/pubmedSearchArticles/logic.js.map +1 -1
- package/dist/mcp-server/tools/pubmedSearchArticles/registration.js.map +1 -1
- package/dist/mcp-server/transports/http/httpTransport.d.ts +3 -3
- package/dist/mcp-server/transports/http/httpTransport.d.ts.map +1 -1
- package/dist/mcp-server/transports/http/httpTransport.js +17 -11
- package/dist/mcp-server/transports/http/httpTransport.js.map +1 -1
- package/dist/mcp-server/transports/http/mcpTransportMiddleware.d.ts +2 -2
- package/dist/mcp-server/transports/http/mcpTransportMiddleware.d.ts.map +1 -1
- package/dist/mcp-server/transports/http/mcpTransportMiddleware.js +2 -1
- package/dist/mcp-server/transports/http/mcpTransportMiddleware.js.map +1 -1
- package/dist/services/NCBI/core/ncbiConstants.d.ts +1 -1
- package/dist/services/NCBI/core/ncbiConstants.d.ts.map +1 -1
- package/dist/services/NCBI/core/ncbiCoreApiClient.d.ts.map +1 -1
- package/dist/services/NCBI/core/ncbiCoreApiClient.js +5 -4
- package/dist/services/NCBI/core/ncbiCoreApiClient.js.map +1 -1
- package/dist/services/NCBI/core/ncbiRequestQueueManager.d.ts +4 -4
- package/dist/services/NCBI/core/ncbiRequestQueueManager.d.ts.map +1 -1
- package/dist/services/NCBI/core/ncbiRequestQueueManager.js +6 -5
- package/dist/services/NCBI/core/ncbiRequestQueueManager.js.map +1 -1
- package/dist/services/NCBI/core/ncbiResponseHandler.d.ts +1 -1
- package/dist/services/NCBI/core/ncbiResponseHandler.d.ts.map +1 -1
- package/dist/services/NCBI/core/ncbiResponseHandler.js +1 -1
- package/dist/services/NCBI/core/ncbiResponseHandler.js.map +1 -1
- package/dist/services/NCBI/core/ncbiService.d.ts +3 -3
- package/dist/services/NCBI/core/ncbiService.d.ts.map +1 -1
- package/dist/services/NCBI/parsing/eSummaryResultParser.d.ts.map +1 -1
- package/dist/services/NCBI/parsing/eSummaryResultParser.js +2 -1
- package/dist/services/NCBI/parsing/eSummaryResultParser.js.map +1 -1
- package/dist/services/NCBI/parsing/pubmedArticleStructureParser.js +1 -1
- package/dist/services/NCBI/parsing/pubmedArticleStructureParser.js.map +1 -1
- package/dist/services/NCBI/parsing/xmlGenericHelpers.d.ts +2 -2
- package/dist/services/NCBI/parsing/xmlGenericHelpers.d.ts.map +1 -1
- package/dist/services/NCBI/parsing/xmlGenericHelpers.js +17 -23
- package/dist/services/NCBI/parsing/xmlGenericHelpers.js.map +1 -1
- package/dist/types-global/pubmedXml.d.ts +9 -9
- package/dist/types-global/pubmedXml.d.ts.map +1 -1
- package/dist/utils/metrics/tokenCounter.js +4 -4
- package/dist/utils/metrics/tokenCounter.js.map +1 -1
- package/package.json +18 -7
- package/dist/mcp-server/core/managedMcpServer.d.ts +0 -48
- package/dist/mcp-server/core/managedMcpServer.d.ts.map +0 -1
- package/dist/mcp-server/core/managedMcpServer.js +0 -58
- package/dist/mcp-server/core/managedMcpServer.js.map +0 -1
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{"version":3,"file":"eSummaryResultParser.d.ts","sourceRoot":"","sources":["../../../../src/services/NCBI/parsing/eSummaryResultParser.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,EAKL,cAAc,EACd,kBAAkB,EAClB,cAAc,IAAI,iBAAiB,EAEpC,MAAM,oCAAoC,CAAC;AAC5C,OAAO,EAGL,cAAc,EAEf,MAAM,yBAAyB,CAAC;AAGjC;;;;;GAKG;AACH,wBAAgB,qBAAqB,CAAC,OAAO,CAAC,EAAE,iBAAiB,EAAE,GAAG,MAAM,CAQ3E;AAED;;;;;;GAMG;AACH,wBAAsB,uBAAuB,CAC3C,OAAO,CAAC,EAAE,MAAM,EAChB,aAAa,CAAC,EAAE,cAAc,GAC7B,OAAO,CAAC,MAAM,GAAG,SAAS,CAAC,CAkC7B;AAwQD;;;;;;;GAOG;AACH,wBAAsB,qBAAqB,CACzC,cAAc,CAAC,EAAE,cAAc,EAC/B,OAAO,CAAC,EAAE,cAAc,GACvB,OAAO,CAAC,kBAAkB,EAAE,CAAC,CAuD/B"}
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@@ -130,7 +130,8 @@ function parseESummaryAuthorsFromDocumentSummary(docSummary) {
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}
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else if (typeof authItem === "object" &&
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authItem !== null &&
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(authItem.name ||
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(authItem.name ||
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authItem.Name)) {
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// If it's an object with a name property, treat as XmlESummaryAuthorRaw
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processRawAuthor(authItem);
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}
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{"version":3,"file":"eSummaryResultParser.js","sourceRoot":"","sources":["../../../../src/services/NCBI/parsing/eSummaryResultParser.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAYH,OAAO,EACL,UAAU,EACV,MAAM,EAEN,qBAAqB,GACtB,MAAM,yBAAyB,CAAC,CAAC,0CAA0C;AAC5E,OAAO,EAAE,WAAW,EAAE,YAAY,EAAE,OAAO,EAAE,MAAM,wBAAwB,CAAC;AAE5E;;;;;GAKG;AACH,MAAM,UAAU,qBAAqB,CAAC,OAA6B;IACjE,IAAI,CAAC,OAAO,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC;QAAE,OAAO,EAAE,CAAC;IAChD,OAAO,CACL,OAAO;SACJ,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC;SACX,GAAG,CAAC,CAAC,MAAM,EAAE,EAAE,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC,mDAAmD;SAChF,IAAI,CAAC,IAAI,CAAC,GAAG,CAAC,OAAO,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC,UAAU,CAAC,CAAC,CAAC,EAAE,CAAC,CACvD,CAAC;AACJ,CAAC;AAED;;;;;;GAMG;AACH,MAAM,CAAC,KAAK,UAAU,uBAAuB,CAC3C,OAAgB,EAChB,aAA8B;IAE9B,IAAI,OAAO,KAAK,SAAS,IAAI,OAAO,KAAK,IAAI;QAAE,OAAO,SAAS,CAAC,CAAC,yBAAyB;IAE1F,MAAM,eAAe,GAAG,MAAM,CAAC,OAAO,CAAC,CAAC,CAAC,uBAAuB;IAEhE,MAAM,cAAc,GAClB,aAAa;QACb,qBAAqB,CAAC,oBAAoB,CAAC;YACzC,SAAS,EAAE,iCAAiC;YAC5C,SAAS,EAAE,eAAe,EAAE,8BAA8B;SAC3D,CAAC,CAAC;IACL,IAAI,CAAC;QACH,kDAAkD;QAClD,MAAM,UAAU,GAAG,MAAM,UAAU,CAAC,SAAS,CAC3C,eAAe,EACf,cAAc,CACf,CAAC;QACF,IAAI,UAAU,EAAE,CAAC;YACf,OAAO,UAAU,CAAC,WAAW,EAAE,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,uBAAuB;QACxE,CAAC;QACD,MAAM,CAAC,KAAK,CACV,wDAAwD,eAAe,yBAAyB,EAChG,cAAc,CACf,CAAC;IACJ,CAAC;IAAC,OAAO,CAAC,EAAE,CAAC;QACX,MAAM,CAAC,OAAO,CACZ,mEAAmE,eAAe,yBAAyB,EAC3G;YACE,GAAG,cAAc;YACjB,KAAK,EAAE,CAAC,YAAY,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC;SAClD,CACF,CAAC;IACJ,CAAC;IACD,OAAO,SAAS,CAAC,CAAC,oCAAoC;AACxD,CAAC;AAED;;;;;GAKG;AACH,SAAS,uCAAuC,CAC9C,UAAmC;IAEnC,MAAM,WAAW,GAAG,UAAU,CAAC,OAAO,CAAC;IACvC,IAAI,CAAC,WAAW;QAAE,OAAO,EAAE,CAAC;IAE5B,MAAM,aAAa,GAAwB,EAAE,CAAC;IAE9C,MAAM,gBAAgB,GAAG,CAAC,YAA2C,EAAE,EAAE;QACvE,IAAI,IAAI,GAAG,EAAE,CAAC;QACd,IAAI,QAA4B,CAAC;QACjC,IAAI,SAA6B,CAAC;QAElC,IAAI,OAAO,YAAY,KAAK,QAAQ,EAAE,CAAC;YACrC,IAAI,GAAG,YAAY,CAAC;QACtB,CAAC;aAAM,IAAI,YAAY,IAAI,OAAO,YAAY,KAAK,QAAQ,EAAE,CAAC;YAC5D,MAAM,SAAS,GAAG,YAAoC,CAAC,CAAC,YAAY;YACpE,wFAAwF;YACxF,IAAI,GAAG,OAAO,CAAC,SAAS,EAAE,EAAE,CAAC,CAAC;YAE9B,qEAAqE;YACrE,IAAI,CAAC,IAAI,EAAE,CAAC;gBACV,IAAI,GAAG,OAAO,CAAC,SAAS,CAAC,IAAI,IAAI,SAAS,CAAC,IAAI,EAAE,EAAE,CAAC,CAAC;YACvD,CAAC;YAED,QAAQ,GAAG,OAAO,CAAC,SAAS,CAAC,QAAQ,IAAI,SAAS,CAAC,QAAQ,EAAE,SAAS,CAAC,CAAC;YACxE,SAAS,GAAG,OAAO,CACjB,SAAS,CAAC,SAAS,IAAI,SAAS,CAAC,SAAS,EAC1C,SAAS,CACV,CAAC;YAEF,8DAA8D;YAC9D,IAAI,CAAC,IAAI,EAAE,CAAC;gBACV,MAAM,eAAe,GAAG,IAAI,CAAC,SAAS,CAAC,SAAS,CAAC,CAAC;gBAClD,MAAM,CAAC,OAAO,CACZ,qFAAqF,eAAe,CAAC,SAAS,CAAC,CAAC,EAAE,GAAG,CAAC,EAAE,EACxH,qBAAqB,CAAC,oBAAoB,CAAC;oBACzC,SAAS,EAAE,yCAAyC;oBACpD,MAAM,EAAE,4BAA4B;iBACrC,CAAC,CACH,CAAC;gBACF,wFAAwF;gBACxF,MAAM,IAAI,GAAG,MAAM,CAAC,IAAI,CAAC,SAAS,CAAC,CAAC;gBACpC,IACE,IAAI,CAAC,MAAM,KAAK,CAAC;oBACjB,IAAI,CAAC,CAAC,CAAC;oBACP,OAAQ,SAAqC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,QAAQ,EACnE,CAAC;oBACD,IAAI,GAAI,SAAqC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAW,CAAC;gBACnE,CAAC;qBAAM,IAAI,eAAe,CAAC,MAAM,GAAG,GAAG,EAAE,CAAC;oBACxC,wCAAwC;oBACxC,IAAI,GAAG,eAAe,CAAC,CAAC,iDAAiD;gBAC3E,CAAC;YACH,CAAC;QACH,CAAC;QAED,IAAI,IAAI,CAAC,IAAI,EAAE,EAAE,CAAC;YAChB,aAAa,CAAC,IAAI,CAAC;gBACjB,IAAI,EAAE,IAAI,CAAC,IAAI,EAAE;gBACjB,QAAQ;gBACR,SAAS;aACV,CAAC,CAAC;QACL,CAAC;IACH,CAAC,CAAC;IAEF,IAAI,KAAK,CAAC,OAAO,CAAC,WAAW,CAAC,EAAE,CAAC;QAC/B,oEAAoE;QACnE,WAAiD,CAAC,OAAO,CACxD,gBAAgB,CACjB,CAAC;IACJ,CAAC;SAAM,IACL,OAAO,WAAW,KAAK,QAAQ;QAC/B,QAAQ,IAAI,WAAW,IAAI,iCAAiC;QAC5D,WAAW,CAAC,MAAM,EAClB,CAAC;QACD,MAAM,UAAU,GAAG,WAAW,CAC5B,WAAW,CAAC,MAGF,CACX,CAAC;QACF,UAAU,CAAC,OAAO,CAAC,gBAAgB,CAAC,CAAC;IACvC,CAAC;SAAM,IAAI,OAAO,WAAW,KAAK,QAAQ,EAAE,CAAC;QAC3C,IAAI,CAAC;YACH,wDAAwD;YACxD,IAAI,WAAW,CAAC,UAAU,CAAC,GAAG,CAAC,IAAI,WAAW,CAAC,QAAQ,CAAC,GAAG,CAAC,EAAE,CAAC;gBAC7D,MAAM,iBAAiB,GAAG,IAAI,CAAC,KAAK,CAAC,WAAW,CAAc,CAAC;gBAC/D,IAAI,KAAK,CAAC,OAAO,CAAC,iBAAiB,CAAC,EAAE,CAAC;oBACrC,iBAAiB,CAAC,OAAO,CAAC,CAAC,QAAiB,EAAE,EAAE;wBAC9C,IAAI,OAAO,QAAQ,KAAK,QAAQ,EAAE,CAAC;4BACjC,aAAa,CAAC,IAAI,CAAC,EAAE,IAAI,EAAE,QAAQ,CAAC,IAAI,EAAE,EAAE,CAAC,CAAC;wBAChD,CAAC;6BAAM,IACL,OAAO,QAAQ,KAAK,QAAQ;4BAC5B,QAAQ,KAAK,IAAI;4BACjB,CAAE,QAAiC,CAAC,IAAI;gCACrC,QAAiC,CAAC,IAAI,CAAC,EAC1C,CAAC;4BACD,wEAAwE;4BACxE,gBAAgB,CAAC,QAAgC,CAAC,CAAC;wBACrD,CAAC;oBACH,CAAC,CAAC,CAAC;oBACH,IAAI,aAAa,CAAC,MAAM,GAAG,CAAC;wBAAE,OAAO,aAAa,CAAC,CAAC,yCAAyC;gBAC/F,CAAC;YACH,CAAC;QACH,CAAC;QAAC,OAAO,CAAC,EAAE,CAAC;YACX,MAAM,CAAC,KAAK,CACV,2CAA2C,WAAW,CAAC,SAAS,CAAC,CAAC,EAAE,GAAG,CAAC,EAAE,EAC1E,qBAAqB,CAAC,oBAAoB,CAAC;gBACzC,SAAS,EAAE,gCAAgC;gBAC3C,KAAK,EAAE,WAAW,CAAC,SAAS,CAAC,CAAC,EAAE,GAAG,CAAC;gBACpC,KAAK,EAAE,CAAC,YAAY,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC;aAClD,CAAC,CACH,CAAC;QACJ,CAAC;QACD,8CAA8C;QAC9C,WAAW;aACR,KAAK,CAAC,MAAM,CAAC;aACb,GAAG,CAAC,CAAC,QAAgB,EAAE,EAAE,CAAC,QAAQ,CAAC,IAAI,EAAE,CAAC;aAC1C,MAAM,CAAC,CAAC,QAAQ,EAAE,EAAE,CAAC,QAAQ,CAAC;aAC9B,OAAO,CAAC,CAAC,QAAQ,EAAE,EAAE,CAAC,aAAa,CAAC,IAAI,CAAC,EAAE,IAAI,EAAE,QAAQ,EAAE,CAAC,CAAC,CAAC;IACnE,CAAC;IACD,OAAO,aAAa,CAAC,MAAM,CAAC,CAAC,MAAM,EAAE,EAAE,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC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@@ -193,7 +193,7 @@ export function extractAbstractText(abstractXml) {
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return at;
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}
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// If it's an object, it should have #text or Label
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-
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+
const sectionText = getText(at); // Handles at["#text"]
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const label = getAttribute(at, "Label");
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if (label && sectionText) {
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return `${label.trim()}: ${sectionText.trim()}`;
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@@ -1 +1 @@
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1
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-
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{"version":3,"file":"xmlGenericHelpers.d.ts","sourceRoot":"","sources":["../../../../src/services/NCBI/parsing/xmlGenericHelpers.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH;;;;;;GAMG;AACH,wBAAgB,WAAW,CAAC,CAAC,EAAE,IAAI,EAAE,CAAC,GAAG,CAAC,EAAE,GAAG,SAAS,GAAG,IAAI,GAAG,CAAC,EAAE,CAKpE;AAED;;;;;;GAMG;AACH,wBAAgB,OAAO,CAAC,OAAO,EAAE,
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{"version":3,"file":"xmlGenericHelpers.d.ts","sourceRoot":"","sources":["../../../../src/services/NCBI/parsing/xmlGenericHelpers.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH;;;;;;GAMG;AACH,wBAAgB,WAAW,CAAC,CAAC,EAAE,IAAI,EAAE,CAAC,GAAG,CAAC,EAAE,GAAG,SAAS,GAAG,IAAI,GAAG,CAAC,EAAE,CAKpE;AAED;;;;;;GAMG;AACH,wBAAgB,OAAO,CAAC,OAAO,EAAE,OAAO,EAAE,YAAY,SAAK,GAAG,MAAM,CAoBnE;AAED;;;;;;;GAOG;AACH,wBAAgB,YAAY,CAC1B,OAAO,EAAE,OAAO,EAChB,aAAa,EAAE,MAAM,EAAE,6BAA6B;AACpD,YAAY,SAAK,GAChB,MAAM,CAUR"}
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{"version":3,"file":"xmlGenericHelpers.js","sourceRoot":"","sources":["../../../../src/services/NCBI/parsing/xmlGenericHelpers.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH;;;;;;GAMG;AACH,MAAM,UAAU,WAAW,CAAI,IAAgC;IAC7D,IAAI,IAAI,KAAK,SAAS,IAAI,IAAI,KAAK,IAAI,EAAE,CAAC;QACxC,OAAO,EAAE,CAAC;IACZ,CAAC;IACD,OAAO,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC;AAC7C,CAAC;AAED;;;;;;GAMG;AACH,MAAM,UAAU,OAAO,CAAC,
|
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1
|
+
{"version":3,"file":"xmlGenericHelpers.js","sourceRoot":"","sources":["../../../../src/services/NCBI/parsing/xmlGenericHelpers.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH;;;;;;GAMG;AACH,MAAM,UAAU,WAAW,CAAI,IAAgC;IAC7D,IAAI,IAAI,KAAK,SAAS,IAAI,IAAI,KAAK,IAAI,EAAE,CAAC;QACxC,OAAO,EAAE,CAAC;IACZ,CAAC;IACD,OAAO,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC;AAC7C,CAAC;AAED;;;;;;GAMG;AACH,MAAM,UAAU,OAAO,CAAC,OAAgB,EAAE,YAAY,GAAG,EAAE;IACzD,IAAI,OAAO,KAAK,SAAS,IAAI,OAAO,KAAK,IAAI,EAAE,CAAC;QAC9C,OAAO,YAAY,CAAC;IACtB,CAAC;IACD,IAAI,OAAO,OAAO,KAAK,QAAQ,EAAE,CAAC;QAChC,OAAO,OAAO,CAAC;IACjB,CAAC;IACD,IAAI,OAAO,OAAO,KAAK,QAAQ,IAAI,OAAO,OAAO,KAAK,SAAS,EAAE,CAAC;QAChE,OAAO,MAAM,CAAC,OAAO,CAAC,CAAC,CAAC,wCAAwC;IAClE,CAAC;IACD,IAAI,OAAO,OAAO,KAAK,QAAQ,EAAE,CAAC;QAChC,MAAM,GAAG,GAAG,OAAkC,CAAC;QAC/C,IAAI,GAAG,CAAC,OAAO,CAAC,KAAK,SAAS,EAAE,CAAC;YAC/B,MAAM,GAAG,GAAG,GAAG,CAAC,OAAO,CAAC,CAAC;YACzB,IAAI,OAAO,GAAG,KAAK,QAAQ;gBAAE,OAAO,GAAG,CAAC;YACxC,IAAI,OAAO,GAAG,KAAK,QAAQ,IAAI,OAAO,GAAG,KAAK,SAAS;gBACrD,OAAO,MAAM,CAAC,GAAG,CAAC,CAAC;QACvB,CAAC;IACH,CAAC;IACD,OAAO,YAAY,CAAC;AACtB,CAAC;AAED;;;;;;;GAOG;AACH,MAAM,UAAU,YAAY,CAC1B,OAAgB,EAChB,aAAqB,EAAE,6BAA6B;AACpD,YAAY,GAAG,EAAE;IAEjB,MAAM,iBAAiB,GAAG,KAAK,aAAa,EAAE,CAAC,CAAC,gCAAgC;IAChF,IAAI,OAAO,IAAI,OAAO,OAAO,KAAK,QAAQ,EAAE,CAAC;QAC3C,MAAM,GAAG,GAAG,OAAkC,CAAC;QAC/C,MAAM,GAAG,GAAG,GAAG,CAAC,iBAAiB,CAAC,CAAC;QACnC,IAAI,OAAO,GAAG,KAAK,QAAQ;YAAE,OAAO,GAAG,CAAC;QACxC,IAAI,OAAO,GAAG,KAAK,SAAS;YAAE,OAAO,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,uCAAuC;QACzF,IAAI,OAAO,GAAG,KAAK,QAAQ;YAAE,OAAO,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,sCAAsC;IACzF,CAAC;IACD,OAAO,YAAY,CAAC;AACtB,CAAC"}
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@@ -6,7 +6,7 @@
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*/
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7
7
|
export interface XmlTextElement {
|
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8
8
|
"#text"?: string;
|
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9
|
-
[key: string]:
|
|
9
|
+
[key: string]: unknown;
|
|
10
10
|
}
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|
11
11
|
export type XmlPMID = XmlTextElement;
|
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12
12
|
export interface XmlArticleDate extends XmlTextElement {
|
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@@ -152,7 +152,7 @@ export interface XmlPubmedArticle {
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};
|
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|
PublicationStatus?: XmlTextElement;
|
|
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|
ArticleIdList?: XmlArticleIdList;
|
|
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|
-
ReferenceList?:
|
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155
|
+
ReferenceList?: unknown;
|
|
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|
};
|
|
157
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|
}
|
|
158
158
|
export interface XmlPubmedArticleSet {
|
|
@@ -227,7 +227,7 @@ export interface XmlESummaryAuthorRaw {
|
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|
ClusterId?: string;
|
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|
clusterid?: string;
|
|
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229
|
"#text"?: string;
|
|
230
|
-
[key: string]:
|
|
230
|
+
[key: string]: unknown;
|
|
231
231
|
}
|
|
232
232
|
/**
|
|
233
233
|
* Represents a normalized author entry after parsing from ESummary data.
|
|
@@ -242,7 +242,7 @@ export interface ESummaryArticleId {
|
|
|
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|
idtype: string;
|
|
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|
idtypen: number;
|
|
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|
value: string;
|
|
245
|
-
[key: string]:
|
|
245
|
+
[key: string]: unknown;
|
|
246
246
|
}
|
|
247
247
|
export interface ESummaryHistory {
|
|
248
248
|
pubstatus: string;
|
|
@@ -253,7 +253,7 @@ export interface ESummaryItem {
|
|
|
253
253
|
Item?: ESummaryItem[] | ESummaryItem;
|
|
254
254
|
_Name: string;
|
|
255
255
|
_Type: "String" | "Integer" | "Date" | "List" | "Structure" | "Unknown" | "ERROR";
|
|
256
|
-
[key: string]:
|
|
256
|
+
[key: string]: unknown;
|
|
257
257
|
}
|
|
258
258
|
export interface ESummaryDocSumOldXml {
|
|
259
259
|
Id: string;
|
|
@@ -285,12 +285,12 @@ export interface ESummaryDocumentSummary {
|
|
|
285
285
|
History?: ESummaryHistory[] | {
|
|
286
286
|
PubMedPubDate: ESummaryHistory[] | ESummaryHistory;
|
|
287
287
|
};
|
|
288
|
-
References?:
|
|
288
|
+
References?: unknown[];
|
|
289
289
|
Attributes?: string[];
|
|
290
290
|
DOI?: string;
|
|
291
291
|
FullJournalName?: string;
|
|
292
292
|
SO?: string;
|
|
293
|
-
[key: string]:
|
|
293
|
+
[key: string]: unknown;
|
|
294
294
|
}
|
|
295
295
|
export interface ESummaryDocumentSummarySet {
|
|
296
296
|
DocumentSummary: ESummaryDocumentSummary[] | ESummaryDocumentSummary;
|
|
@@ -299,7 +299,7 @@ export interface ESummaryResult {
|
|
|
299
299
|
DocSum?: ESummaryDocSumOldXml[] | ESummaryDocSumOldXml;
|
|
300
300
|
DocumentSummarySet?: ESummaryDocumentSummarySet;
|
|
301
301
|
ERROR?: string;
|
|
302
|
-
[key: string]:
|
|
302
|
+
[key: string]: unknown;
|
|
303
303
|
}
|
|
304
304
|
export interface ESummaryResponseContainer {
|
|
305
305
|
eSummaryResult: ESummaryResult;
|
|
@@ -341,7 +341,7 @@ export interface ESearchResultContent {
|
|
|
341
341
|
WebEnv?: string;
|
|
342
342
|
IdList?: ESearchResultIdList;
|
|
343
343
|
TranslationSet?: ESearchTranslationSet;
|
|
344
|
-
TranslationStack?:
|
|
344
|
+
TranslationStack?: unknown;
|
|
345
345
|
QueryTranslation: string;
|
|
346
346
|
ErrorList?: ESearchErrorList;
|
|
347
347
|
WarningList?: ESearchWarningList;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"pubmedXml.d.ts","sourceRoot":"","sources":["../../src/types-global/pubmedXml.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAGH,MAAM,WAAW,cAAc;IAC7B,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,CAAC,GAAG,EAAE,MAAM,GAAG,
|
|
1
|
+
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@@ -81,11 +81,11 @@ export async function countChatTokens(messages, context) {
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"tool_calls" in message &&
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message.tool_calls) {
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for (const tool_call of message.tool_calls) {
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-
if (tool_call.function.name) {
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+
if (tool_call.type === "function" && tool_call.function.name) {
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num_tokens += encoding.encode(tool_call.function.name).length;
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-
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-
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-
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86
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+
if (tool_call.function.arguments) {
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+
num_tokens += encoding.encode(tool_call.function.arguments).length;
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+
}
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}
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}
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}
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@@ -1 +1 @@
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1
|
-
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|
|
1
|
+
{"version":3,"file":"tokenCounter.js","sourceRoot":"","sources":["../../../src/utils/metrics/tokenCounter.ts"],"names":[],"mappings":"AAQA,OAAO,EAAE,kBAAkB,EAA2B,MAAM,UAAU,CAAC;AACvE,OAAO,EAAE,aAAa,EAAE,MAAM,8BAA8B,CAAC;AAC7D,OAAO,EAAE,YAAY,EAAE,MAAM,EAAkB,MAAM,aAAa,CAAC;AAEnE;;;;GAIG;AACH,MAAM,kBAAkB,GAAkB,QAAQ,CAAC;AAEnD;;;;;;;;;GASG;AACH,MAAM,CAAC,KAAK,UAAU,WAAW,CAC/B,IAAY,EACZ,OAAwB;IAExB,OAAO,YAAY,CAAC,QAAQ,CAC1B,GAAG,EAAE;QACH,IAAI,QAAQ,GAAoB,IAAI,CAAC;QACrC,IAAI,CAAC;YACH,QAAQ,GAAG,kBAAkB,CAAC,kBAAkB,CAAC,CAAC;YAClD,MAAM,MAAM,GAAG,QAAQ,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;YACrC,OAAO,MAAM,CAAC,MAAM,CAAC;QACvB,CAAC;gBAAS,CAAC;YACT,QAAQ,EAAE,IAAI,EAAE,CAAC;QACnB,CAAC;IACH,CAAC,EACD;QACE,SAAS,EAAE,aAAa;QACxB,OAAO,EAAE,OAAO;QAChB,KAAK,EAAE,EAAE,UAAU,EAAE,IAAI,CAAC,SAAS,CAAC,CAAC,EAAE,EAAE,CAAC,GAAG,KAAK,EAAE;QACpD,SAAS,EAAE,aAAa,CAAC,cAAc;KACxC,CACF,CAAC;AACJ,CAAC;AAED;;;;;;;;;;;;;GAaG;AACH,MAAM,CAAC,KAAK,UAAU,eAAe,CACnC,QAAmD,EACnD,OAAwB;IAExB,OAAO,YAAY,CAAC,QAAQ,CAC1B,GAAG,EAAE;QACH,IAAI,QAAQ,GAAoB,IAAI,CAAC;QACrC,IAAI,UAAU,GAAG,CAAC,CAAC;QACnB,IAAI,CAAC;YACH,QAAQ,GAAG,kBAAkB,CAAC,kBAAkB,CAAC,CAAC;YAElD,MAAM,kBAAkB,GAAG,CAAC,CAAC,CAAC,mCAAmC;YACjE,MAAM,eAAe,GAAG,CAAC,CAAC,CAAC,mCAAmC;YAE9D,KAAK,MAAM,OAAO,IAAI,QAAQ,EAAE,CAAC;gBAC/B,UAAU,IAAI,kBAAkB,CAAC;gBACjC,UAAU,IAAI,QAAQ,CAAC,MAAM,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC,MAAM,CAAC;gBAEnD,IAAI,OAAO,OAAO,CAAC,OAAO,KAAK,QAAQ,EAAE,CAAC;oBACxC,UAAU,IAAI,QAAQ,CAAC,MAAM,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,MAAM,CAAC;gBACxD,CAAC;qBAAM,IAAI,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,OAAO,CAAC,EAAE,CAAC;oBAC1C,KAAK,MAAM,IAAI,IAAI,OAAO,CAAC,OAAO,EAAE,CAAC;wBACnC,IAAI,IAAI,CAAC,IAAI,KAAK,MAAM,EAAE,CAAC;4BACzB,UAAU,IAAI,QAAQ,CAAC,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,MAAM,CAAC;wBAClD,CAAC;6BAAM,CAAC;4BACN,MAAM,CAAC,OAAO,CACZ,sCAAsC,IAAI,CAAC,IAAI,sCAAsC,EACrF,OAAO,CACR,CAAC;wBACJ,CAAC;oBACH,CAAC;gBACH,CAAC;gBAED,IAAI,MAAM,IAAI,OAAO,IAAI,OAAO,CAAC,IAAI,EAAE,CAAC;oBACtC,UAAU,IAAI,eAAe,CAAC;oBAC9B,UAAU,IAAI,QAAQ,CAAC,MAAM,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC,MAAM,CAAC;gBACrD,CAAC;gBAED,IACE,OAAO,CAAC,IAAI,KAAK,WAAW;oBAC5B,YAAY,IAAI,OAAO;oBACvB,OAAO,CAAC,UAAU,EAClB,CAAC;oBACD,KAAK,MAAM,SAAS,IAAI,OAAO,CAAC,UAAU,EAAE,CAAC;wBAC3C,IAAI,SAAS,CAAC,IAAI,KAAK,UAAU,IAAI,SAAS,CAAC,QAAQ,CAAC,IAAI,EAAE,CAAC;4BAC7D,UAAU,IAAI,QAAQ,CAAC,MAAM,CAAC,SAAS,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,MAAM,CAAC;4BAC9D,IAAI,SAAS,CAAC,QAAQ,CAAC,SAAS,EAAE,CAAC;gCACjC,UAAU,IAAI,QAAQ,CAAC,MAAM,CAC3B,SAAS,CAAC,QAAQ,CAAC,SAAS,CAC7B,CAAC,MAAM,CAAC;4BACX,CAAC;wBACH,CAAC;oBACH,CAAC;gBACH,CAAC;gBAED,IACE,OAAO,CAAC,IAAI,KAAK,MAAM;oBACvB,cAAc,IAAI,OAAO;oBACzB,OAAO,CAAC,YAAY,EACpB,CAAC;oBACD,UAAU,IAAI,QAAQ,CAAC,MAAM,CAAC,OAAO,CAAC,YAAY,CAAC,CAAC,MAAM,CAAC;gBAC7D,CAAC;YACH,CAAC;YACD,UAAU,IAAI,CAAC,CAAC,CAAC,2DAA2D;YAC5E,OAAO,UAAU,CAAC;QACpB,CAAC;gBAAS,CAAC;YACT,QAAQ,EAAE,IAAI,EAAE,CAAC;QACnB,CAAC;IACH,CAAC,EACD;QACE,SAAS,EAAE,iBAAiB;QAC5B,OAAO,EAAE,OAAO;QAChB,KAAK,EAAE,EAAE,YAAY,EAAE,QAAQ,CAAC,MAAM,EAAE;QACxC,SAAS,EAAE,aAAa,CAAC,cAAc;KACxC,CACF,CAAC;AACJ,CAAC"}
|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@cyanheads/pubmed-mcp-server",
|
|
3
|
-
"version": "1.4.
|
|
3
|
+
"version": "1.4.3",
|
|
4
4
|
"description": "Production-ready PubMed Model Context Protocol (MCP) server that empowers AI agents and research tools with comprehensive access to PubMed's article database. Enables advanced, automated LLM workflows for searching, retrieving, analyzing, and visualizing biomedical and scientific literature via NCBI E-utilities.",
|
|
5
5
|
"main": "dist/index.js",
|
|
6
6
|
"files": [
|
|
@@ -26,14 +26,19 @@
|
|
|
26
26
|
"start:http": "MCP_LOG_LEVEL=debug MCP_TRANSPORT_TYPE=http node dist/index.js",
|
|
27
27
|
"rebuild": "ts-node --esm scripts/clean.ts && npm run build",
|
|
28
28
|
"docs:generate": "typedoc --tsconfig ./tsconfig.typedoc.json",
|
|
29
|
+
"lint": "eslint .",
|
|
30
|
+
"lint:fix": "eslint . --fix",
|
|
29
31
|
"tree": "ts-node --esm scripts/tree.ts",
|
|
30
32
|
"fetch-spec": "ts-node --esm scripts/fetch-openapi-spec.ts",
|
|
31
33
|
"format": "prettier --write \"**/*.{ts,js,json,md,html,css}\"",
|
|
32
|
-
"inspector": "mcp-inspector --config mcp.json --server pubmed-mcp-server"
|
|
34
|
+
"inspector": "mcp-inspector --config mcp.json --server pubmed-mcp-server",
|
|
35
|
+
"test": "vitest run",
|
|
36
|
+
"test:watch": "vitest",
|
|
37
|
+
"test:coverage": "vitest run --coverage"
|
|
33
38
|
},
|
|
34
39
|
"dependencies": {
|
|
35
40
|
"@hono/node-server": "^1.17.1",
|
|
36
|
-
"@modelcontextprotocol/sdk": "^1.17.
|
|
41
|
+
"@modelcontextprotocol/sdk": "^1.17.2",
|
|
37
42
|
"@opentelemetry/api": "^1.9.0",
|
|
38
43
|
"@opentelemetry/auto-instrumentations-node": "^0.62.0",
|
|
39
44
|
"@opentelemetry/exporter-metrics-otlp-http": "^0.203.0",
|
|
@@ -44,12 +49,13 @@
|
|
|
44
49
|
"@opentelemetry/sdk-node": "^0.203.0",
|
|
45
50
|
"@opentelemetry/sdk-trace-node": "^2.0.1",
|
|
46
51
|
"@opentelemetry/semantic-conventions": "^1.36.0",
|
|
47
|
-
"@types/node": "^24.2.
|
|
52
|
+
"@types/node": "^24.2.1",
|
|
48
53
|
"@types/sanitize-html": "^2.16.0",
|
|
49
54
|
"@types/validator": "13.15.2",
|
|
50
55
|
"axios": "^1.11.0",
|
|
51
56
|
"chart.js": "^4.5.0",
|
|
52
57
|
"chartjs-node-canvas": "^5.0.0",
|
|
58
|
+
"typescript-eslint": "^8.39.0",
|
|
53
59
|
"chrono-node": "^2.8.3",
|
|
54
60
|
"citation-js": "^0.7.20",
|
|
55
61
|
"dotenv": "^16.6.1",
|
|
@@ -58,8 +64,9 @@
|
|
|
58
64
|
"jose": "^6.0.12",
|
|
59
65
|
"js-yaml": "^4.1.0",
|
|
60
66
|
"patch-package": "^8.0.0",
|
|
67
|
+
"tmp": "^0.2.4",
|
|
61
68
|
"node-cron": "^4.2.1",
|
|
62
|
-
"openai": "^5.
|
|
69
|
+
"openai": "^5.12.2",
|
|
63
70
|
"partial-json": "^0.1.7",
|
|
64
71
|
"sanitize-html": "^2.17.0",
|
|
65
72
|
"tiktoken": "^1.0.21",
|
|
@@ -98,7 +105,8 @@
|
|
|
98
105
|
"research-agent",
|
|
99
106
|
"generative-ai"
|
|
100
107
|
],
|
|
101
|
-
"author": "
|
|
108
|
+
"author": "Casey Hand @cyanheads",
|
|
109
|
+
"email": "casey@caseyjhand.com",
|
|
102
110
|
"license": "Apache-2.0",
|
|
103
111
|
"funding": [
|
|
104
112
|
{
|
|
@@ -116,8 +124,11 @@
|
|
|
116
124
|
"devDependencies": {
|
|
117
125
|
"@types/js-yaml": "^4.0.9",
|
|
118
126
|
"@types/node-cron": "^3.0.11",
|
|
127
|
+
"eslint": "^9.32.0",
|
|
119
128
|
"prettier": "^3.6.2",
|
|
120
|
-
"typedoc": "^0.28.9"
|
|
129
|
+
"typedoc": "^0.28.9",
|
|
130
|
+
"vite-tsconfig-paths": "^5.1.4",
|
|
131
|
+
"vitest": "^3.2.4"
|
|
121
132
|
},
|
|
122
133
|
"publishConfig": {
|
|
123
134
|
"access": "public"
|
|
@@ -1,48 +0,0 @@
|
|
|
1
|
-
/**
|
|
2
|
-
* @fileoverview Defines a wrapper around the McpServer class to provide
|
|
3
|
-
* extended functionality, such as metadata introspection, without needing
|
|
4
|
-
* to access private properties of the underlying SDK class.
|
|
5
|
-
* @module src/mcp-server/core/managedMcpServer
|
|
6
|
-
*/
|
|
7
|
-
import { McpServer } from "@modelcontextprotocol/sdk/server/mcp.js";
|
|
8
|
-
type RegisterToolParameters = Parameters<McpServer["registerTool"]>;
|
|
9
|
-
type ToolSpec = RegisterToolParameters[1];
|
|
10
|
-
type ToolImplementation = RegisterToolParameters[2];
|
|
11
|
-
type RegisteredToolReturn = ReturnType<McpServer["registerTool"]>;
|
|
12
|
-
type ServerIdentity = ConstructorParameters<typeof McpServer>[0];
|
|
13
|
-
type McpServerOptions = NonNullable<ConstructorParameters<typeof McpServer>[1]>;
|
|
14
|
-
/**
|
|
15
|
-
* A wrapper around the McpServer that captures registration metadata
|
|
16
|
-
* to make it available for status endpoints and other diagnostics.
|
|
17
|
-
* It acts as a full pass-through for all McpServer functionality.
|
|
18
|
-
*/
|
|
19
|
-
export declare class ManagedMcpServer extends McpServer {
|
|
20
|
-
private readonly storedTools;
|
|
21
|
-
readonly serverIdentity: ServerIdentity;
|
|
22
|
-
readonly serverOptions?: McpServerOptions;
|
|
23
|
-
constructor(identity: ServerIdentity, options?: McpServerOptions);
|
|
24
|
-
registerTool(name: string, spec: ToolSpec, implementation: ToolImplementation): RegisteredToolReturn;
|
|
25
|
-
/**
|
|
26
|
-
* Retrieves the metadata for all registered tools.
|
|
27
|
-
*/
|
|
28
|
-
getTools(): {
|
|
29
|
-
name: string;
|
|
30
|
-
description?: string;
|
|
31
|
-
inputSchema: unknown;
|
|
32
|
-
outputSchema?: unknown;
|
|
33
|
-
}[];
|
|
34
|
-
/**
|
|
35
|
-
* Gets the server's name from its identity.
|
|
36
|
-
*/
|
|
37
|
-
get name(): string;
|
|
38
|
-
/**
|
|
39
|
-
* Gets the server's version from its identity.
|
|
40
|
-
*/
|
|
41
|
-
get version(): string;
|
|
42
|
-
/**
|
|
43
|
-
* Gets the server's capabilities from its options.
|
|
44
|
-
*/
|
|
45
|
-
get capabilities(): McpServerOptions["capabilities"] | undefined;
|
|
46
|
-
}
|
|
47
|
-
export {};
|
|
48
|
-
//# sourceMappingURL=managedMcpServer.d.ts.map
|
|
@@ -1 +0,0 @@
|
|
|
1
|
-
{"version":3,"file":"managedMcpServer.d.ts","sourceRoot":"","sources":["../../../src/mcp-server/core/managedMcpServer.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAKpE,KAAK,sBAAsB,GAAG,UAAU,CAAC,SAAS,CAAC,cAAc,CAAC,CAAC,CAAC;AACpE,KAAK,QAAQ,GAAG,sBAAsB,CAAC,CAAC,CAAC,CAAC;AAC1C,KAAK,kBAAkB,GAAG,sBAAsB,CAAC,CAAC,CAAC,CAAC;AACpD,KAAK,oBAAoB,GAAG,UAAU,CAAC,SAAS,CAAC,cAAc,CAAC,CAAC,CAAC;AAElE,KAAK,cAAc,GAAG,qBAAqB,CAAC,OAAO,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC;AACjE,KAAK,gBAAgB,GAAG,WAAW,CAAC,qBAAqB,CAAC,OAAO,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;AAOhF;;;;GAIG;AACH,qBAAa,gBAAiB,SAAQ,SAAS;IAC7C,OAAO,CAAC,QAAQ,CAAC,WAAW,CAAoB;IAEhD,SAAgB,cAAc,EAAE,cAAc,CAAC;IAC/C,SAAgB,aAAa,CAAC,EAAE,gBAAgB,CAAC;gBAErC,QAAQ,EAAE,cAAc,EAAE,OAAO,CAAC,EAAE,gBAAgB;IAMvD,YAAY,CACnB,IAAI,EAAE,MAAM,EACZ,IAAI,EAAE,QAAQ,EACd,cAAc,EAAE,kBAAkB,GACjC,oBAAoB;IAKvB;;OAEG;IACI,QAAQ,IAAI;QACjB,IAAI,EAAE,MAAM,CAAC;QACb,WAAW,CAAC,EAAE,MAAM,CAAC;QACrB,WAAW,EAAE,OAAO,CAAC;QACrB,YAAY,CAAC,EAAE,OAAO,CAAC;KACxB,EAAE;IASH;;OAEG;IACH,IAAW,IAAI,IAAI,MAAM,CAExB;IAED;;OAEG;IACH,IAAW,OAAO,IAAI,MAAM,CAE3B;IAED;;OAEG;IACH,IAAW,YAAY,IAAI,gBAAgB,CAAC,cAAc,CAAC,GAAG,SAAS,CAQtE;CACF"}
|
|
@@ -1,58 +0,0 @@
|
|
|
1
|
-
/**
|
|
2
|
-
* @fileoverview Defines a wrapper around the McpServer class to provide
|
|
3
|
-
* extended functionality, such as metadata introspection, without needing
|
|
4
|
-
* to access private properties of the underlying SDK class.
|
|
5
|
-
* @module src/mcp-server/core/managedMcpServer
|
|
6
|
-
*/
|
|
7
|
-
import { McpServer } from "@modelcontextprotocol/sdk/server/mcp.js";
|
|
8
|
-
/**
|
|
9
|
-
* A wrapper around the McpServer that captures registration metadata
|
|
10
|
-
* to make it available for status endpoints and other diagnostics.
|
|
11
|
-
* It acts as a full pass-through for all McpServer functionality.
|
|
12
|
-
*/
|
|
13
|
-
export class ManagedMcpServer extends McpServer {
|
|
14
|
-
storedTools = [];
|
|
15
|
-
serverIdentity;
|
|
16
|
-
serverOptions;
|
|
17
|
-
constructor(identity, options) {
|
|
18
|
-
super(identity, options);
|
|
19
|
-
this.serverIdentity = identity;
|
|
20
|
-
this.serverOptions = options;
|
|
21
|
-
}
|
|
22
|
-
registerTool(name, spec, implementation) {
|
|
23
|
-
this.storedTools.push({ name, spec });
|
|
24
|
-
return super.registerTool(name, spec, implementation);
|
|
25
|
-
}
|
|
26
|
-
/**
|
|
27
|
-
* Retrieves the metadata for all registered tools.
|
|
28
|
-
*/
|
|
29
|
-
getTools() {
|
|
30
|
-
return this.storedTools.map((t) => ({
|
|
31
|
-
name: t.name,
|
|
32
|
-
description: t.spec.description,
|
|
33
|
-
inputSchema: t.spec.inputSchema,
|
|
34
|
-
outputSchema: t.spec.outputSchema,
|
|
35
|
-
}));
|
|
36
|
-
}
|
|
37
|
-
/**
|
|
38
|
-
* Gets the server's name from its identity.
|
|
39
|
-
*/
|
|
40
|
-
get name() {
|
|
41
|
-
return this.serverIdentity.name;
|
|
42
|
-
}
|
|
43
|
-
/**
|
|
44
|
-
* Gets the server's version from its identity.
|
|
45
|
-
*/
|
|
46
|
-
get version() {
|
|
47
|
-
return this.serverIdentity.version;
|
|
48
|
-
}
|
|
49
|
-
/**
|
|
50
|
-
* Gets the server's capabilities from its options.
|
|
51
|
-
*/
|
|
52
|
-
get capabilities() {
|
|
53
|
-
// The type inference for McpServerOptions is imperfect, so we cast to a
|
|
54
|
-
// known shape as a pragmatic solution, knowing the property exists at runtime.
|
|
55
|
-
return this.serverOptions?.capabilities;
|
|
56
|
-
}
|
|
57
|
-
}
|
|
58
|
-
//# sourceMappingURL=managedMcpServer.js.map
|
|
@@ -1 +0,0 @@
|
|
|
1
|
-
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|