npm - @cyanheads/pubmed-mcp-server - Versions diffs - 1.3.5 → 1.4.3 - Mend

@cyanheads/pubmed-mcp-server 1.3.5 → 1.4.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (221) hide show

package/dist/mcp-server/transports/http/mcpTransportMiddleware.js CHANGED Viewed

@@ -31,34 +31,37 @@ function toIncomingHttpHeaders(headers) {
  * @returns A promise resolving with the transport response.
  */
 async function handleStatelessRequest(createServerInstanceFn, headers, body, context) {
-    const statelessManager = new StatelessTransportManager(createServerInstanceFn);
+    const getMcpServer = async () => (await createServerInstanceFn()).server;
+    const statelessManager = new StatelessTransportManager(getMcpServer);
     return statelessManager.handleRequest(toIncomingHttpHeaders(headers), body, context);
 }
-export const mcpTransportMiddleware = (transportManager, createServerInstanceFn) => createMiddleware(async (c, next) => {
-    const sessionId = c.req.header("mcp-session-id");
-    const context = requestContextService.createRequestContext({
-        operation: "mcpTransportMiddleware",
-        sessionId,
-    });
-    const body = await c.req.json();
-    let response;
-    if (isInitializeRequest(body)) {
-        if (config.mcpSessionMode === "stateless") {
-            response = await handleStatelessRequest(createServerInstanceFn, c.req.raw.headers, body, context);
+export const mcpTransportMiddleware = (transportManager, createServerInstanceFn) => {
+    return createMiddleware(async (c, next) => {
+        const sessionId = c.req.header("mcp-session-id");
+        const context = requestContextService.createRequestContext({
+            operation: "mcpTransportMiddleware",
+            sessionId,
+        });
+        const body = await c.req.json();
+        let response;
+        if (isInitializeRequest(body)) {
+            if (config.mcpSessionMode === "stateless") {
+                response = await handleStatelessRequest(createServerInstanceFn, c.req.raw.headers, body, context);
+            }
+            else {
+                response = await transportManager.initializeAndHandle(toIncomingHttpHeaders(c.req.raw.headers), body, context);
+            }
         }
         else {
-            response = await transportManager.initializeAndHandle(toIncomingHttpHeaders(c.req.raw.headers), body, context);
-        }
-    }
-    else {
-        if (sessionId) {
-            response = await transportManager.handleRequest(toIncomingHttpHeaders(c.req.raw.headers), body, context, sessionId);
+            if (sessionId) {
+                response = await transportManager.handleRequest(toIncomingHttpHeaders(c.req.raw.headers), body, context, sessionId);
+            }
+            else {
+                response = await handleStatelessRequest(createServerInstanceFn, c.req.raw.headers, body, context);
+            }
         }
-        else {
-            response = await handleStatelessRequest(createServerInstanceFn, c.req.raw.headers, body, context);
-        }
-    }
-    c.set("mcpResponse", response);
-    await next();
-});
+        c.set("mcpResponse", response);
+        await next();
+    });
+};
 //# sourceMappingURL=mcpTransportMiddleware.js.map

package/dist/mcp-server/transports/http/mcpTransportMiddleware.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/services/NCBI/core/ncbiConstants.d.ts CHANGED Viewed

@@ -9,7 +9,7 @@ export declare const NCBI_EUTILS_BASE_URL = "https://eutils.ncbi.nlm.nih.gov/ent
  */
 export interface NcbiRequestParams {
     db?: string;
-    [key: string]: any;
+    [key: string]: string | number | undefined;
 }
 /**
  * Interface for options controlling how NCBI requests are made and responses are handled.

package/dist/services/NCBI/core/ncbiConstants.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"ncbiConstants.d.ts","sourceRoot":"","sources":["../../../../src/services/NCBI/core/ncbiConstants.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,eAAO,MAAM,oBAAoB,kDACgB,CAAC;AAElD;;;GAGG;AACH,MAAM,WAAW,iBAAiB;IAChC,EAAE,CAAC,EAAE,MAAM,CAAC;IACZ,CAAC,GAAG,EAAE,MAAM,GAAG,GAAG,CAAC;~~CACpB~~;AAED;;GAEG;AACH,MAAM,WAAW,kBAAkB;IACjC,OAAO,CAAC,EAAE,KAAK,GAAG,MAAM,GAAG,MAAM,CAAC;IAClC,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,OAAO,CAAC,EAAE,OAAO,CAAC;IAClB,YAAY,CAAC,EAAE,OAAO,CAAC;CACxB"}
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package/dist/services/NCBI/core/ncbiCoreApiClient.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/services/NCBI/core/ncbiCoreApiClient.js CHANGED Viewed

@@ -69,13 +69,14 @@ export class NcbiCoreApiClient {
                 return response;
             }
             catch (error) {
+                const err = error;
                 if (attempt < config.ncbiMaxRetries) {
                     const retryDelay = Math.pow(2, attempt) * 200;
                     logger.warning(`NCBI request to ${endpoint} failed. Retrying (${attempt + 1}/${config.ncbiMaxRetries}) in ${retryDelay}ms...`, requestContextService.createRequestContext({
                         ...context,
                         operation: "NCBI_HttpRequestRetry",
                         endpoint,
-                        error: error.message,
+                        error: err.message,
                         retryCount: attempt + 1,
                         maxRetries: config.ncbiMaxRetries,
                         delay: retryDelay,
@@ -102,13 +103,13 @@ export class NcbiCoreApiClient {
                 }
                 if (error instanceof McpError)
                     throw error;
-                logger.error(`Unexpected error during NCBI request to ${endpoint} after ${attempt} retries`, error, requestContextService.createRequestContext({
+                logger.error(`Unexpected error during NCBI request to ${endpoint} after ${attempt} retries`, err, requestContextService.createRequestContext({
                     ...context,
                     operation: "NCBI_UnexpectedError",
                     endpoint,
-                    errorMessage: error.message,
+                    errorMessage: err.message,
                 }));
-                throw new McpError(BaseErrorCode.INTERNAL_ERROR, `Unexpected error communicating with NCBI: ${error.message}`, { endpoint });
+                throw new McpError(BaseErrorCode.INTERNAL_ERROR, `Unexpected error communicating with NCBI: ${err.message}`, { endpoint });
             }
         }
         // This line should theoretically be unreachable, but it satisfies TypeScript's need

package/dist/services/NCBI/core/ncbiCoreApiClient.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/services/NCBI/core/ncbiRequestQueueManager.d.ts CHANGED Viewed

@@ -7,10 +7,10 @@ import { NcbiRequestParams } from "./ncbiConstants.js";
 /**
  * Interface for a queued NCBI request.
  */
-export interface QueuedRequest {
-    resolve: (value: any) => void;
-    reject: (reason?: any) => void;
-    task: () => Promise<any>;
+export interface QueuedRequest<T = unknown> {
+    resolve: (value: T | PromiseLike<T>) => void;
+    reject: (reason?: unknown) => void;
+    task: () => Promise<T>;
     context: RequestContext;
     endpoint: string;
     params: NcbiRequestParams;

package/dist/services/NCBI/core/ncbiRequestQueueManager.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"ncbiRequestQueueManager.d.ts","sourceRoot":"","sources":["../../../../src/services/NCBI/core/ncbiRequestQueueManager.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAGH,OAAO,EAEL,cAAc,EAGf,MAAM,yBAAyB,CAAC;AACjC,OAAO,EAAE,iBAAiB,EAAE,MAAM,oBAAoB,CAAC;AAEvD;;GAEG;AACH,MAAM,WAAW,aAAa,CAAC,CAAC,GAAG,OAAO;IACxC,OAAO,EAAE,CAAC,KAAK,EAAE,CAAC,GAAG,WAAW,CAAC,CAAC,CAAC,KAAK,IAAI,CAAC;IAC7C,MAAM,EAAE,CAAC,MAAM,CAAC,EAAE,OAAO,KAAK,IAAI,CAAC;IACnC,IAAI,EAAE,MAAM,OAAO,CAAC,CAAC,CAAC,CAAC;IACvB,OAAO,EAAE,cAAc,CAAC;IACxB,QAAQ,EAAE,MAAM,CAAC;IACjB,MAAM,EAAE,iBAAiB,CAAC;CAC3B;AAED,qBAAa,uBAAuB;IAClC,OAAO,CAAC,YAAY,CAAuB;IAC3C,OAAO,CAAC,iBAAiB,CAAS;IAClC,OAAO,CAAC,eAAe,CAAK;;IAM5B;;OAEG;YACW,YAAY;IAmE1B;;;;;;;OAOG;IACI,cAAc,CAAC,CAAC,EACrB,IAAI,EAAE,MAAM,OAAO,CAAC,CAAC,CAAC,EACtB,OAAO,EAAE,cAAc,EACvB,QAAQ,EAAE,MAAM,EAChB,MAAM,EAAE,iBAAiB,GACxB,OAAO,CAAC,CAAC,CAAC;CAgBd"}

package/dist/services/NCBI/core/ncbiRequestQueueManager.js CHANGED Viewed

@@ -49,14 +49,15 @@ export class NcbiRequestQueueManager {
             resolve(result);
         }
         catch (error) {
-            logger.error("Error processing NCBI request from queue", error instanceof Error ? error : new Error(String(error)), requestContextService.createRequestContext({
+            const err = error;
+            logger.error("Error processing NCBI request from queue", err, requestContextService.createRequestContext({
                 ...context,
                 operation: "NCBI_QueueError",
                 endpoint,
                 params: sanitizeInputForLogging(params),
-                errorMessage: error?.message,
+                errorMessage: err?.message,
             }));
-            reject(error);
+            reject(err);
         }
         finally {
             this.isProcessingQueue = false;
@@ -77,8 +78,8 @@ export class NcbiRequestQueueManager {
     enqueueRequest(task, context, endpoint, params) {
         return new Promise((resolve, reject) => {
             this.requestQueue.push({
-                resolve,
-                reject,
+                resolve: (value) => resolve(value),
+                reject: (reason) => reject(reason),
                 task,
                 context,
                 endpoint,

package/dist/services/NCBI/core/ncbiRequestQueueManager.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/services/NCBI/core/ncbiResponseHandler.d.ts CHANGED Viewed

@@ -18,6 +18,6 @@ export declare class NcbiResponseHandler {
      * @returns The parsed data (object for XML/JSON, string for text).
      * @throws {McpError} If parsing fails or NCBI reports an error in the response body.
      */
-    parseAndHandleResponse<T = any>(response: AxiosResponse, endpoint: string, context: RequestContext, options: NcbiRequestOptions): T;
+    parseAndHandleResponse<T>(response: AxiosResponse, endpoint: string, context: RequestContext, options: NcbiRequestOptions): T;
 }
 //# sourceMappingURL=ncbiResponseHandler.d.ts.map

package/dist/services/NCBI/core/ncbiResponseHandler.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/services/NCBI/core/ncbiResponseHandler.js CHANGED Viewed

@@ -72,7 +72,7 @@ export class NcbiResponseHandler {
             }
         }
         // Handle warnings if no primary errors found
-        if (messages.length === 0 && parsedXml.eSearchResult?.WarningList) {
+        if (messages.length === 0) {
             const warningPaths = [
                 "eSearchResult.WarningList.QuotedPhraseNotFound",
                 "eSearchResult.WarningList.OutputMessage",

package/dist/services/NCBI/core/ncbiResponseHandler.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ 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package/dist/services/NCBI/core/ncbiService.d.ts CHANGED Viewed

@@ -17,10 +17,10 @@ export declare class NcbiService {
     constructor();
     private performNcbiRequest;
     eSearch(params: NcbiRequestParams, context: RequestContext): Promise<ESearchResult>;
-    eSummary(params: NcbiRequestParams, context: RequestContext): Promise<any>;
+    eSummary(params: NcbiRequestParams, context: RequestContext): Promise<unknown>;
     eFetch(params: NcbiRequestParams, context: RequestContext, options?: NcbiRequestOptions): Promise<EFetchArticleSet>;
-    eLink(params: NcbiRequestParams, context: RequestContext): Promise<any>;
-    eInfo(params: NcbiRequestParams, context: RequestContext): Promise<any>;
+    eLink(params: NcbiRequestParams, context: RequestContext): Promise<unknown>;
+    eInfo(params: NcbiRequestParams, context: RequestContext): Promise<unknown>;
 }
 export declare function getNcbiService(): NcbiService;
 //# sourceMappingURL=ncbiService.d.ts.map

package/dist/services/NCBI/core/ncbiService.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"ncbiService.d.ts","sourceRoot":"","sources":["../../../../src/services/NCBI/core/ncbiService.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAEH,OAAO,EACL,aAAa,EACb,gBAAgB,EAEjB,MAAM,oCAAoC,CAAC;AAC5C,OAAO,EAEL,cAAc,EAEf,MAAM,yBAAyB,CAAC;AACjC,OAAO,EAAE,iBAAiB,EAAE,kBAAkB,EAAE,MAAM,oBAAoB,CAAC;AAK3E,qBAAa,WAAW;IACtB,OAAO,CAAC,YAAY,CAA0B;IAC9C,OAAO,CAAC,SAAS,CAAoB;IACrC,OAAO,CAAC,eAAe,CAAsB;;YAQ/B,kBAAkB;IAwBnB,OAAO,CAClB,MAAM,EAAE,iBAAiB,EACzB,OAAO,EAAE,cAAc,GACtB,OAAO,CAAC,aAAa,CAAC;IAwBZ,QAAQ,CACnB,MAAM,EAAE,iBAAiB,EACzB,OAAO,EAAE,cAAc,GACtB,OAAO,CAAC,OAAO,CAAC;IAON,MAAM,CACjB,MAAM,EAAE,iBAAiB,EACzB,OAAO,EAAE,cAAc,EACvB,OAAO,GAAE,kBAAuC,GAC/C,OAAO,CAAC,gBAAgB,CAAC;IAcf,KAAK,CAChB,MAAM,EAAE,iBAAiB,EACzB,OAAO,EAAE,cAAc,GACtB,OAAO,CAAC,OAAO,CAAC;IAMN,KAAK,CAChB,MAAM,EAAE,iBAAiB,EACzB,OAAO,EAAE,cAAc,GACtB,OAAO,CAAC,OAAO,CAAC;CAKpB;AAID,wBAAgB,cAAc,IAAI,WAAW,CAY5C"}

package/dist/services/NCBI/parsing/eSummaryResultParser.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"eSummaryResultParser.d.ts","sourceRoot":"","sources":["../../../../src/services/NCBI/parsing/eSummaryResultParser.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,EAKL,cAAc,EACd,kBAAkB,EAClB,cAAc,IAAI,iBAAiB,EAEpC,MAAM,oCAAoC,CAAC;AAC5C,OAAO,EAGL,cAAc,EAEf,MAAM,yBAAyB,CAAC;AAGjC;;;;;GAKG;AACH,wBAAgB,qBAAqB,CAAC,OAAO,CAAC,EAAE,iBAAiB,EAAE,GAAG,MAAM,CAQ3E;AAED;;;;;;GAMG;AACH,wBAAsB,uBAAuB,CAC3C,OAAO,CAAC,EAAE,MAAM,EAChB,aAAa,CAAC,EAAE,cAAc,GAC7B,OAAO,CAAC,MAAM,GAAG,SAAS,CAAC,CAkC7B;~~AAuQD~~;;;;;;;GAOG;AACH,wBAAsB,qBAAqB,CACzC,cAAc,CAAC,EAAE,cAAc,EAC/B,OAAO,CAAC,EAAE,cAAc,GACvB,OAAO,CAAC,kBAAkB,EAAE,CAAC,CAuD/B"}
1	+ {"version":3,"file":"eSummaryResultParser.d.ts","sourceRoot":"","sources":["../../../../src/services/NCBI/parsing/eSummaryResultParser.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,EAKL,cAAc,EACd,kBAAkB,EAClB,cAAc,IAAI,iBAAiB,EAEpC,MAAM,oCAAoC,CAAC;AAC5C,OAAO,EAGL,cAAc,EAEf,MAAM,yBAAyB,CAAC;AAGjC;;;;;GAKG;AACH,wBAAgB,qBAAqB,CAAC,OAAO,CAAC,EAAE,iBAAiB,EAAE,GAAG,MAAM,CAQ3E;AAED;;;;;;GAMG;AACH,wBAAsB,uBAAuB,CAC3C,OAAO,CAAC,EAAE,MAAM,EAChB,aAAa,CAAC,EAAE,cAAc,GAC7B,OAAO,CAAC,MAAM,GAAG,SAAS,CAAC,CAkC7B;AAwQD;;;;;;;GAOG;AACH,wBAAsB,qBAAqB,CACzC,cAAc,CAAC,EAAE,cAAc,EAC/B,OAAO,CAAC,EAAE,cAAc,GACvB,OAAO,CAAC,kBAAkB,EAAE,CAAC,CAuD/B"}

package/dist/services/NCBI/parsing/eSummaryResultParser.js CHANGED Viewed

@@ -130,7 +130,8 @@ function parseESummaryAuthorsFromDocumentSummary(docSummary) {
                         }
                         else if (typeof authItem === "object" &&
                             authItem !== null &&
-                            (authItem.name || authItem.Name)) {
+                            (authItem.name ||
+                                authItem.Name)) {
                             // If it's an object with a name property, treat as XmlESummaryAuthorRaw
                             processRawAuthor(authItem);
                         }

package/dist/services/NCBI/parsing/eSummaryResultParser.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/services/NCBI/parsing/pubmedArticleStructureParser.js CHANGED Viewed

@@ -193,7 +193,7 @@ export function extractAbstractText(abstractXml) {
             return at;
         }
         // If it's an object, it should have #text or Label
-        let sectionText = getText(at); // Handles at["#text"]
+        const sectionText = getText(at); // Handles at["#text"]
         const label = getAttribute(at, "Label");
         if (label && sectionText) {
             return `${label.trim()}: ${sectionText.trim()}`;

package/dist/services/NCBI/parsing/pubmedArticleStructureParser.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/dist/services/NCBI/parsing/xmlGenericHelpers.d.ts CHANGED Viewed

@@ -18,7 +18,7 @@ export declare function ensureArray<T>(item: T | T[] | undefined | null): T[];
  * @param defaultValue - The value to return if text cannot be extracted. Defaults to an empty string.
  * @returns The text content or the default value.
  */
-export declare function getText(element: any, defaultValue?: string): string;
+export declare function getText(element: unknown, defaultValue?: string): string;
 /**
  * Safely extracts an attribute value from an XML element.
  * Assumes attributes are prefixed with "@_" by fast-xml-parser.
@@ -27,6 +27,6 @@ export declare function getText(element: any, defaultValue?: string): string;
  * @param defaultValue - The value to return if the attribute is not found. Defaults to an empty string.
  * @returns The attribute value or the default value.
  */
-export declare function getAttribute(element: any, attributeName: string, // e.g., "UI", "MajorTopicYN"
+export declare function getAttribute(element: unknown, attributeName: string, // e.g., "UI", "MajorTopicYN"
 defaultValue?: string): string;
 //# sourceMappingURL=xmlGenericHelpers.d.ts.map

package/dist/services/NCBI/parsing/xmlGenericHelpers.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"xmlGenericHelpers.d.ts","sourceRoot":"","sources":["../../../../src/services/NCBI/parsing/xmlGenericHelpers.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH;;;;;;GAMG;AACH,wBAAgB,WAAW,CAAC,CAAC,EAAE,IAAI,EAAE,CAAC,GAAG,CAAC,EAAE,GAAG,SAAS,GAAG,IAAI,GAAG,CAAC,EAAE,CAKpE;AAED;;;;;;GAMG;AACH,wBAAgB,OAAO,CAAC,OAAO,EAAE,~~GAAG~~,EAAE,YAAY,SAAK,GAAG,MAAM,~~CAwB/D~~;AAED;;;;;;;GAOG;AACH,wBAAgB,YAAY,CAC1B,OAAO,EAAE,~~GAAG~~,~~EACZ~~,aAAa,EAAE,MAAM,EAAE,6BAA6B;AACpD,YAAY,SAAK,GAChB,MAAM,~~CAwBR~~"}
1	+ {"version":3,"file":"xmlGenericHelpers.d.ts","sourceRoot":"","sources":["../../../../src/services/NCBI/parsing/xmlGenericHelpers.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH;;;;;;GAMG;AACH,wBAAgB,WAAW,CAAC,CAAC,EAAE,IAAI,EAAE,CAAC,GAAG,CAAC,EAAE,GAAG,SAAS,GAAG,IAAI,GAAG,CAAC,EAAE,CAKpE;AAED;;;;;;GAMG;AACH,wBAAgB,OAAO,CAAC,OAAO,EAAE,OAAO,EAAE,YAAY,SAAK,GAAG,MAAM,CAoBnE;AAED;;;;;;;GAOG;AACH,wBAAgB,YAAY,CAC1B,OAAO,EAAE,OAAO,EAChB,aAAa,EAAE,MAAM,EAAE,6BAA6B;AACpD,YAAY,SAAK,GAChB,MAAM,CAUR"}

package/dist/services/NCBI/parsing/xmlGenericHelpers.js CHANGED Viewed

@@ -33,15 +33,14 @@ export function getText(element, defaultValue = "") {
     if (typeof element === "number" || typeof element === "boolean") {
         return String(element); // Handle direct number/boolean elements
     }
-    if (typeof element === "object" && element["#text"] !== undefined) {
-        // Check if #text exists and convert to string
-        if (typeof element["#text"] === "string") {
-            return element["#text"];
-        }
-        // Also handle #text being a number or boolean
-        if (typeof element["#text"] === "number" ||
-            typeof element["#text"] === "boolean") {
-            return String(element["#text"]);
+    if (typeof element === "object") {
+        const obj = element;
+        if (obj["#text"] !== undefined) {
+            const val = obj["#text"];
+            if (typeof val === "string")
+                return val;
+            if (typeof val === "number" || typeof val === "boolean")
+                return String(val);
         }
     }
     return defaultValue;
@@ -57,20 +56,15 @@ export function getText(element, defaultValue = "") {
 export function getAttribute(element, attributeName, // e.g., "UI", "MajorTopicYN"
 defaultValue = "") {
     const fullAttributeName = `@_${attributeName}`; // As per fast-xml-parser config
-    if (element &&
-        typeof element === "object" &&
-        typeof element[fullAttributeName] === "string") {
-        return element[fullAttributeName];
-    }
-    if (element &&
-        typeof element === "object" &&
-        typeof element[fullAttributeName] === "boolean") {
-        return String(element[fullAttributeName]); // Convert boolean attributes to string
-    }
-    if (element &&
-        typeof element === "object" &&
-        typeof element[fullAttributeName] === "number") {
-        return String(element[fullAttributeName]); // Convert number attributes to string
+    if (element && typeof element === "object") {
+        const obj = element;
+        const val = obj[fullAttributeName];
+        if (typeof val === "string")
+            return val;
+        if (typeof val === "boolean")
+            return String(val); // Convert boolean attributes to string
+        if (typeof val === "number")
+            return String(val); // Convert number attributes to string
     }
     return defaultValue;
 }

package/dist/services/NCBI/parsing/xmlGenericHelpers.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"xmlGenericHelpers.js","sourceRoot":"","sources":["../../../../src/services/NCBI/parsing/xmlGenericHelpers.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH;;;;;;GAMG;AACH,MAAM,UAAU,WAAW,CAAI,IAAgC;IAC7D,IAAI,IAAI,KAAK,SAAS,IAAI,IAAI,KAAK,IAAI,EAAE,CAAC;QACxC,OAAO,EAAE,CAAC;IACZ,CAAC;IACD,OAAO,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC;AAC7C,CAAC;AAED;;;;;;GAMG;AACH,MAAM,UAAU,OAAO,CAAC,OAAgB,EAAE,YAAY,GAAG,EAAE;IACzD,IAAI,OAAO,KAAK,SAAS,IAAI,OAAO,KAAK,IAAI,EAAE,CAAC;QAC9C,OAAO,YAAY,CAAC;IACtB,CAAC;IACD,IAAI,OAAO,OAAO,KAAK,QAAQ,EAAE,CAAC;QAChC,OAAO,OAAO,CAAC;IACjB,CAAC;IACD,IAAI,OAAO,OAAO,KAAK,QAAQ,IAAI,OAAO,OAAO,KAAK,SAAS,EAAE,CAAC;QAChE,OAAO,MAAM,CAAC,OAAO,CAAC,CAAC,CAAC,wCAAwC;IAClE,CAAC;IACD,IAAI,OAAO,OAAO,KAAK,QAAQ,EAAE,CAAC;QAChC,MAAM,GAAG,GAAG,OAAkC,CAAC;QAC/C,IAAI,GAAG,CAAC,OAAO,CAAC,KAAK,SAAS,EAAE,CAAC;YAC/B,MAAM,GAAG,GAAG,GAAG,CAAC,OAAO,CAAC,CAAC;YACzB,IAAI,OAAO,GAAG,KAAK,QAAQ;gBAAE,OAAO,GAAG,CAAC;YACxC,IAAI,OAAO,GAAG,KAAK,QAAQ,IAAI,OAAO,GAAG,KAAK,SAAS;gBACrD,OAAO,MAAM,CAAC,GAAG,CAAC,CAAC;QACvB,CAAC;IACH,CAAC;IACD,OAAO,YAAY,CAAC;AACtB,CAAC;AAED;;;;;;;GAOG;AACH,MAAM,UAAU,YAAY,CAC1B,OAAgB,EAChB,aAAqB,EAAE,6BAA6B;AACpD,YAAY,GAAG,EAAE;IAEjB,MAAM,iBAAiB,GAAG,KAAK,aAAa,EAAE,CAAC,CAAC,gCAAgC;IAChF,IAAI,OAAO,IAAI,OAAO,OAAO,KAAK,QAAQ,EAAE,CAAC;QAC3C,MAAM,GAAG,GAAG,OAAkC,CAAC;QAC/C,MAAM,GAAG,GAAG,GAAG,CAAC,iBAAiB,CAAC,CAAC;QACnC,IAAI,OAAO,GAAG,KAAK,QAAQ;YAAE,OAAO,GAAG,CAAC;QACxC,IAAI,OAAO,GAAG,KAAK,SAAS;YAAE,OAAO,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,uCAAuC;QACzF,IAAI,OAAO,GAAG,KAAK,QAAQ;YAAE,OAAO,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,sCAAsC;IACzF,CAAC;IACD,OAAO,YAAY,CAAC;AACtB,CAAC"}

package/dist/types-global/pubmedXml.d.ts CHANGED Viewed

@@ -6,7 +6,7 @@
  */
 export interface XmlTextElement {
     "#text"?: string;
-    [key: string]: any;
+    [key: string]: unknown;
 }
 export type XmlPMID = XmlTextElement;
 export interface XmlArticleDate extends XmlTextElement {
@@ -152,7 +152,7 @@ export interface XmlPubmedArticle {
         };
         PublicationStatus?: XmlTextElement;
         ArticleIdList?: XmlArticleIdList;
-        ReferenceList?: any;
+        ReferenceList?: unknown;
     };
 }
 export interface XmlPubmedArticleSet {
@@ -227,7 +227,7 @@ export interface XmlESummaryAuthorRaw {
     ClusterId?: string;
     clusterid?: string;
     "#text"?: string;
-    [key: string]: any;
+    [key: string]: unknown;
 }
 /**
  * Represents a normalized author entry after parsing from ESummary data.
@@ -242,7 +242,7 @@ export interface ESummaryArticleId {
     idtype: string;
     idtypen: number;
     value: string;
-    [key: string]: any;
+    [key: string]: unknown;
 }
 export interface ESummaryHistory {
     pubstatus: string;
@@ -253,7 +253,7 @@ export interface ESummaryItem {
     Item?: ESummaryItem[] | ESummaryItem;
     _Name: string;
     _Type: "String" | "Integer" | "Date" | "List" | "Structure" | "Unknown" | "ERROR";
-    [key: string]: any;
+    [key: string]: unknown;
 }
 export interface ESummaryDocSumOldXml {
     Id: string;
@@ -285,12 +285,12 @@ export interface ESummaryDocumentSummary {
     History?: ESummaryHistory[] | {
         PubMedPubDate: ESummaryHistory[] | ESummaryHistory;
     };
-    References?: any[];
+    References?: unknown[];
     Attributes?: string[];
     DOI?: string;
     FullJournalName?: string;
     SO?: string;
-    [key: string]: any;
+    [key: string]: unknown;
 }
 export interface ESummaryDocumentSummarySet {
     DocumentSummary: ESummaryDocumentSummary[] | ESummaryDocumentSummary;
@@ -299,7 +299,7 @@ export interface ESummaryResult {
     DocSum?: ESummaryDocSumOldXml[] | ESummaryDocSumOldXml;
     DocumentSummarySet?: ESummaryDocumentSummarySet;
     ERROR?: string;
-    [key: string]: any;
+    [key: string]: unknown;
 }
 export interface ESummaryResponseContainer {
     eSummaryResult: ESummaryResult;
@@ -341,7 +341,7 @@ export interface ESearchResultContent {
     WebEnv?: string;
     IdList?: ESearchResultIdList;
     TranslationSet?: ESearchTranslationSet;
-    TranslationStack?: any;
+    TranslationStack?: unknown;
     QueryTranslation: string;
     ErrorList?: ESearchErrorList;
     WarningList?: ESearchWarningList;