@cyanheads/protein-mcp-server 0.1.1 → 0.1.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (7) hide show
  1. package/AGENTS.md +2 -2
  2. package/CLAUDE.md +2 -2
  3. package/README.md +24 -1
  4. package/changelog/0.1.x/0.1.2.md +11 -0
  5. package/changelog/0.1.x/0.1.3.md +16 -0
  6. package/package.json +3 -3
  7. package/server.json +9 -3
package/AGENTS.md CHANGED
@@ -1,8 +1,8 @@
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  # Developer Protocol
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  **Server:** protein-mcp-server
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- **Version:** 0.1.1
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- **Framework:** [@cyanheads/mcp-ts-core](https://www.npmjs.com/package/@cyanheads/mcp-ts-core) `^0.10.6`
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+ **Version:** 0.1.3
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+ **Framework:** [@cyanheads/mcp-ts-core](https://www.npmjs.com/package/@cyanheads/mcp-ts-core) `^0.10.9`
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  **Engines:** Bun ≥1.3.0, Node ≥24.0.0
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  **MCP SDK:** `@modelcontextprotocol/sdk` ^1.29.0
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  **Zod:** ^4.4.3
package/CLAUDE.md CHANGED
@@ -1,8 +1,8 @@
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  # Developer Protocol
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  **Server:** protein-mcp-server
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- **Version:** 0.1.1
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- **Framework:** [@cyanheads/mcp-ts-core](https://www.npmjs.com/package/@cyanheads/mcp-ts-core) `^0.10.6`
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+ **Version:** 0.1.3
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+ **Framework:** [@cyanheads/mcp-ts-core](https://www.npmjs.com/package/@cyanheads/mcp-ts-core) `^0.10.9`
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  **Engines:** Bun ≥1.3.0, Node ≥24.0.0
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  **MCP SDK:** `@modelcontextprotocol/sdk` ^1.29.0
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  **Zod:** ^4.4.3
package/README.md CHANGED
@@ -7,7 +7,7 @@
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  <div align="center">
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- [![Version](https://img.shields.io/badge/Version-0.1.1-blue.svg?style=flat-square)](./CHANGELOG.md) [![License](https://img.shields.io/badge/License-Apache%202.0-orange.svg?style=flat-square)](./LICENSE) [![Docker](https://img.shields.io/badge/Docker-ghcr.io-2496ED?style=flat-square&logo=docker&logoColor=white)](https://github.com/users/cyanheads/packages/container/package/protein-mcp-server) [![MCP SDK](https://img.shields.io/badge/MCP%20SDK-^1.29.0-green.svg?style=flat-square)](https://modelcontextprotocol.io/) [![npm](https://img.shields.io/npm/v/@cyanheads/protein-mcp-server?style=flat-square&logo=npm&logoColor=white)](https://www.npmjs.com/package/@cyanheads/protein-mcp-server) [![TypeScript](https://img.shields.io/badge/TypeScript-^6.0.3-3178C6.svg?style=flat-square)](https://www.typescriptlang.org/) [![Bun](https://img.shields.io/badge/Bun-v1.3.2-blueviolet.svg?style=flat-square)](https://bun.sh/)
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+ [![Version](https://img.shields.io/badge/Version-0.1.3-blue.svg?style=flat-square)](./CHANGELOG.md) [![License](https://img.shields.io/badge/License-Apache%202.0-orange.svg?style=flat-square)](./LICENSE) [![Docker](https://img.shields.io/badge/Docker-ghcr.io-2496ED?style=flat-square&logo=docker&logoColor=white)](https://github.com/users/cyanheads/packages/container/package/protein-mcp-server) [![MCP SDK](https://img.shields.io/badge/MCP%20SDK-^1.29.0-green.svg?style=flat-square)](https://modelcontextprotocol.io/) [![npm](https://img.shields.io/npm/v/@cyanheads/protein-mcp-server?style=flat-square&logo=npm&logoColor=white)](https://www.npmjs.com/package/@cyanheads/protein-mcp-server) [![TypeScript](https://img.shields.io/badge/TypeScript-^6.0.3-3178C6.svg?style=flat-square)](https://www.typescriptlang.org/) [![Bun](https://img.shields.io/badge/Bun-v1.3.2-blueviolet.svg?style=flat-square)](https://bun.sh/)
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  </div>
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  </div>
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+ <div align="center">
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+
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+ **Public Hosted Server:** [https://protein.caseyjhand.com/mcp](https://protein.caseyjhand.com/mcp)
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+ </div>
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+
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  ---
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  ## Tools
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  ## Getting started
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+ ### Public Hosted Instance
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+ A public instance is available at `https://protein.caseyjhand.com/mcp` — no installation required. Point any MCP client at it via Streamable HTTP:
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+ ```json
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+ {
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+ "mcpServers": {
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+ "protein": {
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+ "type": "streamable-http",
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+ "url": "https://protein.caseyjhand.com/mcp"
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+ }
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+ }
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+ }
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+ ```
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+
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+ ### Self-hosted
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  Add the following to your MCP client configuration file. No API key is required — every upstream provider is keyless.
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  ```json
package/changelog/0.1.x/0.1.2.md ADDED
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+ ---
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+ summary: "Published metadata now advertises the public hosted Streamable HTTP endpoint at https://protein.caseyjhand.com/mcp."
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+ breaking: false
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+ security: false
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+ ---
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+
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+ # 0.1.2 — 2026-06-18
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+
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+ ## Added
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+ - **Hosted endpoint** — `server.json` gains a `remotes` entry advertising the public Streamable HTTP instance at `https://protein.caseyjhand.com/mcp`, so MCP Registry clients can connect without a local install. The README documents the same endpoint with a centered callout and a `Public Hosted Instance` config snippet.
package/changelog/0.1.x/0.1.3.md ADDED
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+ ---
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+ summary: "Maintenance: mcp-ts-core ^0.10.6 → ^0.10.9, re-synced framework scripts/skills and devcheck guards. No behavior changes."
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+ breaking: false
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+ security: false
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+ ---
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+
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+ # 0.1.3 — 2026-06-20
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+
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+ Framework-maintenance release. No tool, resource, or behavior changes.
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+
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+ ## Changed
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+ - **Dependencies** — `@cyanheads/mcp-ts-core` ^0.10.6 → ^0.10.9; `@types/node` 25.9.3 → 26.0.0.
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+ - **devcheck** — re-synced framework scripts (`build-changelog.ts`, `check-framework-antipatterns.ts`, `check-skill-versions.ts`, `devcheck.ts`, `lint-packaging.ts`) and added `check-dependency-specifiers.ts`, which fails the build on floating dependency specifiers.
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+ - **`devcheck.config.json`** — added `packaging.pluginManifests: true` to enforce plugin-manifest alignment.
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+ - **Skills** — re-synced framework skill docs to the `^0.10.9` baseline.
package/package.json CHANGED
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  {
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  "name": "@cyanheads/protein-mcp-server",
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- "version": "0.1.1",
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+ "version": "0.1.3",
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  "mcpName": "io.github.cyanheads/protein-mcp-server",
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  "description": "Federated protein structure & function across experimental (PDB) and predicted (AlphaFold) models via MCP. STDIO or Streamable HTTP.",
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  "type": "module",
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  "access": "public"
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  },
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  "dependencies": {
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- "@cyanheads/mcp-ts-core": "^0.10.6",
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+ "@cyanheads/mcp-ts-core": "^0.10.9",
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  "pino-pretty": "^13.1.3",
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  "zod": "^4.4.3"
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  },
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  "devDependencies": {
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  "@biomejs/biome": "2.5.0",
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- "@types/node": "25.9.3",
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+ "@types/node": "26.0.0",
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  "depcheck": "^1.4.7",
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  "ignore": "^7.0.5",
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  "tsc-alias": "^1.8.17",
package/server.json CHANGED
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  "url": "https://github.com/cyanheads/protein-mcp-server",
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  "source": "github"
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  },
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- "version": "0.1.1",
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+ "version": "0.1.3",
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+ "remotes": [
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+ {
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+ "type": "streamable-http",
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+ "url": "https://protein.caseyjhand.com/mcp"
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+ }
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+ ],
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  "packages": [
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  {
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  "registryType": "npm",
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  "registryBaseUrl": "https://registry.npmjs.org",
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  "identifier": "@cyanheads/protein-mcp-server",
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  "runtimeHint": "node",
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- "version": "0.1.1",
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+ "version": "0.1.3",
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  "packageArguments": [
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  {
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  "type": "positional",
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  "registryBaseUrl": "https://registry.npmjs.org",
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  "identifier": "@cyanheads/protein-mcp-server",
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  "runtimeHint": "node",
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- "version": "0.1.1",
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+ "version": "0.1.3",
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  "packageArguments": [
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  {
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  "type": "positional",