@cyanheads/openalex-mcp-server 0.6.7 → 0.6.9

package/CLAUDE.md

@@ -1,7 +1,7 @@
 # Agent Protocol
 
 **Server:** openalex-mcp-server
-**Version:** 0.6.7
+**Version:** 0.6.8
 **Framework:** [@cyanheads/mcp-ts-core](https://www.npmjs.com/package/@cyanheads/mcp-ts-core)
 
 > **Read the framework docs first:** `node_modules/@cyanheads/mcp-ts-core/CLAUDE.md` contains the full API reference — builders, Context, error codes, exports, patterns. This file covers server-specific conventions only.
@@ -163,6 +163,8 @@ async handler(input, ctx) {
 }
 ```
 
+**Declare contracts inline on each tool, even when similar across tools.** The contract is part of the tool's documented public surface — reading one tool definition file should give the full picture. Don't extract a shared `errors[]` constant; per-tool repetition is the intended cost of locality.
+
 The OpenAlex service throws factory errors (`notFound`, `rateLimited`, etc.) based on upstream status codes; those bubble through and are auto-classified. Baseline codes (`InternalError`, `ServiceUnavailable`, `Timeout`, `ValidationError`, `SerializationError`) bubble freely without needing to be declared on a contract.
 
 **Fallback for ad-hoc throws:** error factories or plain `Error`.
@@ -232,18 +234,21 @@ Available skills:
 | `add-test` | Scaffold test file for a tool, resource, or service |
 | `field-test` | Exercise tools/resources/prompts with real inputs, verify behavior, report issues |
 | `security-pass` | Audit handlers for MCP-specific security gaps: output injection, scope blast radius, input sinks, tenant isolation |
+| `tool-defs-analysis` | Read-only audit of LLM-facing definition language (voice, leaks, recovery, sparsity, structure) across tools/resources/prompts |
 | `devcheck` | Lint, format, typecheck, audit |
 | `polish-docs-meta` | Finalize docs, README, metadata, and agent protocol for shipping |
 | `maintenance` | Investigate changelogs, adopt upstream changes, sync skills |
 | `report-issue-framework` | File a bug or feature request against `@cyanheads/mcp-ts-core` |
 | `report-issue-local` | File a bug or feature request against this server's own repo |
 | `api-auth` | Auth modes, scopes, JWT/OAuth |
+| `api-canvas` | DataCanvas primitive — register tabular data, run SQL, export, `spillover()` helper. Tier 3 opt-in (DuckDB) |
 | `api-config` | AppConfig, parseConfig, env vars |
 | `api-context` | Context interface, logger, state, progress |
 | `api-errors` | McpError, JsonRpcErrorCode, error patterns |
 | `api-services` | LLM, Speech, Graph services |
 | `api-testing` | createMockContext, test patterns |
 | `api-utils` | Formatting, parsing, security, pagination, scheduling |
+| `api-telemetry` | OTel catalog: spans, metrics, completion logs, env config, cardinality rules |
 | `api-workers` | Cloudflare Workers runtime |
 | `api-linter` | MCP definition lint rules reference (rule IDs, severities, fixes) |
 | `release-and-publish` | End-to-end ship workflow (npm + MCP Registry + GHCR) |

package/Dockerfile

@@ -4,7 +4,7 @@
 # This stage installs all dependencies (including dev), builds the TypeScript
 # source code into JavaScript, and prepares the production assets.
 # ==============================================================================
-FROM oven/bun:1 AS build
+FROM oven/bun:1.3 AS build
 
 WORKDIR /usr/src/app
 
@@ -28,7 +28,7 @@ RUN bun run build
 # application. It uses a slim base image and only includes production
 # dependencies and build artifacts.
 # ==============================================================================
-FROM oven/bun:1-slim AS production
+FROM oven/bun:1.3-slim AS production
 
 WORKDIR /usr/src/app
 

package/README.md

@@ -6,7 +6,7 @@
 
 <div align="center">
 
-[![Version](https://img.shields.io/badge/Version-0.6.7-blue.svg?style=flat-square)](./CHANGELOG.md) [![Framework](https://img.shields.io/badge/Built%20on-@cyanheads/mcp--ts--core-259?style=flat-square)](https://www.npmjs.com/package/@cyanheads/mcp-ts-core) [![MCP SDK](https://img.shields.io/badge/MCP%20SDK-^1.29.0-green.svg?style=flat-square)](https://modelcontextprotocol.io/) [![License](https://img.shields.io/badge/License-Apache%202.0-orange.svg?style=flat-square)](./LICENSE) [![TypeScript](https://img.shields.io/badge/TypeScript-^6.0.3-3178C6.svg?style=flat-square)](https://www.typescriptlang.org/)
+[![Version](https://img.shields.io/badge/Version-0.6.9-blue.svg?style=flat-square)](./CHANGELOG.md) [![Framework](https://img.shields.io/badge/Built%20on-@cyanheads/mcp--ts--core-259?style=flat-square)](https://www.npmjs.com/package/@cyanheads/mcp-ts-core) [![MCP SDK](https://img.shields.io/badge/MCP%20SDK-^1.29.0-green.svg?style=flat-square)](https://modelcontextprotocol.io/) [![License](https://img.shields.io/badge/License-Apache%202.0-orange.svg?style=flat-square)](./LICENSE) [![TypeScript](https://img.shields.io/badge/TypeScript-^6.0.3-3178C6.svg?style=flat-square)](https://www.typescriptlang.org/)
 
 </div>
 

package/dist/mcp-server/prompts/definitions/literature-review.prompt.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"literature-review.prompt.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/prompts/definitions/literature-review.prompt.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAU,CAAC,EAAE,MAAM,wBAAwB,CAAC;AAEnD,eAAO,MAAM,sBAAsB;;;;;;kBAuDjC,CAAC"}

package/dist/mcp-server/prompts/definitions/literature-review.prompt.js

@@ -7,7 +7,9 @@ export const literatureReviewPrompt = prompt('openalex_literature_review', {
     description: 'Guides a systematic literature search: formulate query, search, filter, analyze citation network, synthesize findings.',
     sourceUrl: 'https://github.com/cyanheads/openalex-mcp-server/blob/main/src/mcp-server/prompts/definitions/literature-review.prompt.ts',
     args: z.object({
-        topic: z.string().describe('Research topic or question to review.'),
+        topic: z
+            .string()
+            .describe('Research topic or question to review (e.g., "CRISPR off-target effects in human cell lines").'),
         scope: z
             .enum(['narrow', 'broad'])
             .default('narrow')

package/dist/mcp-server/prompts/definitions/literature-review.prompt.js.map

@@ -1 +1 @@
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+{"version":3,"file":"literature-review.prompt.js","sourceRoot":"","sources":["../../../../src/mcp-server/prompts/definitions/literature-review.prompt.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,wBAAwB,CAAC;AAEnD,MAAM,CAAC,MAAM,sBAAsB,GAAG,MAAM,CAAC,4BAA4B,EAAE;IACzE,WAAW,EACT,wHAAwH;IAC1H,SAAS,EACP,2HAA2H;IAC7H,IAAI,EAAE,CAAC,CAAC,MAAM,CAAC;QACb,KAAK,EAAE,CAAC;aACL,MAAM,EAAE;aACR,QAAQ,CACP,+FAA+F,CAChG;QACH,KAAK,EAAE,CAAC;aACL,IAAI,CAAC,CAAC,QAAQ,EAAE,OAAO,CAAC,CAAC;aACzB,OAAO,CAAC,QAAQ,CAAC;aACjB,QAAQ,CAAC,uEAAuE,CAAC;KACrF,CAAC;IACF,QAAQ,EAAE,CAAC,IAAI,EAAE,EAAE,CAAC;QAClB;YACE,IAAI,EAAE,MAAM;YACZ,OAAO,EAAE;gBACP,IAAI,EAAE,MAAM;gBACZ,IAAI,EAAE,+CAA+C,IAAI,CAAC,KAAK;;SAE9D,IAAI,CAAC,KAAK;;;;mHAIgG,IAAI,CAAC,KAAK;;iFAGnH,IAAI,CAAC,KAAK,KAAK,QAAQ;oBACrB,CAAC,CAAC;;;qCAGuB;oBACzB,CAAC,CAAC;;;sEAIN;;;;;;;;;;;;+IAYuI;aACxI;SACF;KACF;CACF,CAAC,CAAC"}

package/dist/mcp-server/prompts/definitions/research-landscape.prompt.js

@@ -7,7 +7,7 @@ export const researchLandscapePrompt = prompt('openalex_research_landscape', {
     description: 'Analyzes the research landscape for a topic: volume trends, top authors/institutions, open access rates, funding sources.',
     sourceUrl: 'https://github.com/cyanheads/openalex-mcp-server/blob/main/src/mcp-server/prompts/definitions/research-landscape.prompt.ts',
     args: z.object({
-        topic: z.string().describe('Research area to analyze.'),
+        topic: z.string().describe('Research area to analyze (e.g., "single-cell RNA sequencing").'),
     }),
     generate: (args) => [
         {

package/dist/mcp-server/prompts/definitions/research-landscape.prompt.js.map

@@ -1 +1 @@
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+{"version":3,"file":"research-landscape.prompt.js","sourceRoot":"","sources":["../../../../src/mcp-server/prompts/definitions/research-landscape.prompt.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,wBAAwB,CAAC;AAEnD,MAAM,CAAC,MAAM,uBAAuB,GAAG,MAAM,CAAC,6BAA6B,EAAE;IAC3E,WAAW,EACT,2HAA2H;IAC7H,SAAS,EACP,4HAA4H;IAC9H,IAAI,EAAE,CAAC,CAAC,MAAM,CAAC;QACb,KAAK,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,gEAAgE,CAAC;KAC7F,CAAC;IACF,QAAQ,EAAE,CAAC,IAAI,EAAE,EAAE,CAAC;QAClB;YACE,IAAI,EAAE,MAAM;YACZ,OAAO,EAAE;gBACP,IAAI,EAAE,MAAM;gBACZ,IAAI,EAAE,wCAAwC,IAAI,CAAC,KAAK;;;;gFAIgB,IAAI,CAAC,KAAK;;;;;;;;;;;;;;;;;4EAiBd;aACrE;SACF;KACF;CACF,CAAC,CAAC"}

package/dist/mcp-server/tools/definitions/analyze-trends.tool.d.ts

@@ -51,7 +51,7 @@ export declare const analyzeTrendsTool: import("@cyanheads/mcp-ts-core").ToolDef
     readonly reason: "upstream_invalid_params";
     readonly code: JsonRpcErrorCode.InvalidParams;
     readonly when: "OpenAlex rejected the group_by or filter as malformed (HTTP 400).";
-    readonly recovery: "Check that group_by names a valid field and that filter syntax matches the OpenAlex docs.";
+    readonly recovery: "Read the upstream message for the rejected token, then retry with a valid group_by field for the entity_type (publication_year/type/oa_status for works; country_code/has_orcid for authors).";
 }, {
     readonly reason: "upstream_validation_failed";
     readonly code: JsonRpcErrorCode.ValidationError;

package/dist/mcp-server/tools/definitions/analyze-trends.tool.js

@@ -34,7 +34,7 @@ export const analyzeTrendsTool = tool('openalex_analyze_trends', {
             reason: 'upstream_invalid_params',
             code: JsonRpcErrorCode.InvalidParams,
             when: 'OpenAlex rejected the group_by or filter as malformed (HTTP 400).',
-            recovery: 'Check that group_by names a valid field and that filter syntax matches the OpenAlex docs.',
+            recovery: 'Read the upstream message for the rejected token, then retry with a valid group_by field for the entity_type (publication_year/type/oa_status for works; country_code/has_orcid for authors).',
         },
         {
             reason: 'upstream_validation_failed',

package/dist/mcp-server/tools/definitions/analyze-trends.tool.js.map

@@ -1 +1 @@
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package/dist/mcp-server/tools/definitions/resolve-name.tool.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"resolve-name.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/resolve-name.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AAIjE,eAAO,MAAM,eAAe;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAqI1B,CAAC"}
+{"version":3,"file":"resolve-name.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/resolve-name.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AAIjE,eAAO,MAAM,eAAe;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAuI1B,CAAC"}

package/dist/mcp-server/tools/definitions/resolve-name.tool.js

@@ -7,7 +7,7 @@ import { JsonRpcErrorCode } from '@cyanheads/mcp-ts-core/errors';
 import { getOpenAlexService } from '../../../services/openalex/openalex-service.js';
 import { ENTITY_TYPES } from '../../../services/openalex/types.js';
 export const resolveNameTool = tool('openalex_resolve_name', {
-    description: 'Resolve a name or partial name to an OpenAlex ID. Returns up to 10 matches with disambiguation hints. ALWAYS use this before filtering by entity — names are ambiguous, IDs are not. Also accepts DOIs directly for quick lookup. Response time ~200ms.',
+    description: 'Resolve a name or partial name to an OpenAlex ID. Returns up to 10 matches with disambiguation hints. ALWAYS use this before filtering by entity — names are ambiguous, IDs are not. Also accepts DOIs directly for quick lookup.',
     sourceUrl: 'https://github.com/cyanheads/openalex-mcp-server/blob/main/src/mcp-server/tools/definitions/resolve-name.tool.ts',
     annotations: { readOnlyHint: true, idempotentHint: true, openWorldHint: true },
     errors: [
@@ -69,7 +69,7 @@ export const resolveNameTool = tool('openalex_resolve_name', {
             display_name: z.string().describe('Human-readable name.'),
             entity_type: z
                 .string()
-                .describe('Entity type (work, author, source, institution, etc.).'),
+                .describe('Entity type — one of: work, author, source, institution, topic, keyword, publisher, funder.'),
             cited_by_count: z
                 .number()
                 .describe('Citation count (direct for works, aggregate for others).'),

package/dist/mcp-server/tools/definitions/resolve-name.tool.js.map

@@ -1 +1 @@
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+{"version":3,"file":"resolve-name.tool.js","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/resolve-name.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,IAAI,EAAE,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AACjE,OAAO,EAAE,kBAAkB,EAAE,MAAM,yCAAyC,CAAC;AAC7E,OAAO,EAAE,YAAY,EAAE,MAAM,8BAA8B,CAAC;AAE5D,MAAM,CAAC,MAAM,eAAe,GAAG,IAAI,CAAC,uBAAuB,EAAE;IAC3D,WAAW,EACT,mOAAmO;IACrO,SAAS,EACP,kHAAkH;IACpH,WAAW,EAAE,EAAE,YAAY,EAAE,IAAI,EAAE,cAAc,EAAE,IAAI,EAAE,aAAa,EAAE,IAAI,EAAE;IAC9E,MAAM,EAAE;QACN;YACE,MAAM,EAAE,cAAc;YACtB,IAAI,EAAE,gBAAgB,CAAC,WAAW;YAClC,IAAI,EAAE,yDAAyD;YAC/D,SAAS,EAAE,IAAI;YACf,QAAQ,EACN,sFAAsF;SACzF;QACD;YACE,MAAM,EAAE,uBAAuB;YAC/B,IAAI,EAAE,gBAAgB,CAAC,YAAY;YACnC,IAAI,EAAE,2CAA2C;YACjD,QAAQ,EACN,0FAA0F;SAC7F;QACD;YACE,MAAM,EAAE,oBAAoB;YAC5B,IAAI,EAAE,gBAAgB,CAAC,SAAS;YAChC,IAAI,EAAE,oDAAoD;YAC1D,QAAQ,EAAE,yEAAyE;SACpF;QACD;YACE,MAAM,EAAE,yBAAyB;YACjC,IAAI,EAAE,gBAAgB,CAAC,aAAa;YACpC,IAAI,EAAE,mEAAmE;YACzE,QAAQ,EACN,uFAAuF;SAC1F;QACD;YACE,MAAM,EAAE,4BAA4B;YACpC,IAAI,EAAE,gBAAgB,CAAC,eAAe;YACtC,IAAI,EAAE,gFAAgF;YACtF,QAAQ,EACN,kGAAkG;SACrG;KACF;IACD,KAAK,EAAE,CAAC,CAAC,MAAM,CAAC;QACd,WAAW,EAAE,CAAC;aACX,IAAI,CAAC,YAAY,CAAC;aAClB,QAAQ,EAAE;aACV,QAAQ,CACP,2FAA2F,CAC5F;QACH,KAAK,EAAE,CAAC;aACL,MAAM,EAAE;aACR,GAAG,CAAC,CAAC,CAAC;aACN,QAAQ,CAAC,sEAAsE,CAAC;QACnF,OAAO,EAAE,CAAC;aACP,MAAM,CAAC,CAAC,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC;aAC9B,QAAQ,EAAE;aACV,QAAQ,CACP,8GAA8G,CAC/G;KACJ,CAAC;IACF,MAAM,EAAE,CAAC,CAAC,MAAM,CAAC;QACf,OAAO,EAAE,CAAC;aACP,KAAK,CACJ,CAAC;aACE,MAAM,CAAC;YACN,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,cAAc,CAAC;YACvC,WAAW,EAAE,CAAC;iBACX,MAAM,EAAE;iBACR,QAAQ,EAAE;iBACV,QAAQ,CAAC,gDAAgD,CAAC;YAC7D,YAAY,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,sBAAsB,CAAC;YACzD,WAAW,EAAE,CAAC;iBACX,MAAM,EAAE;iBACR,QAAQ,CACP,6FAA6F,CAC9F;YACH,cAAc,EAAE,CAAC;iBACd,MAAM,EAAE;iBACR,QAAQ,CAAC,0DAA0D,CAAC;YACvE,WAAW,EAAE,CAAC;iBACX,MAAM,EAAE;iBACR,QAAQ,EAAE;iBACV,QAAQ,CAAC,8CAA8C,CAAC;YAC3D,IAAI,EAAE,CAAC;iBACJ,MAAM,EAAE;iBACR,QAAQ,EAAE;iBACV,QAAQ,CACP,wHAAwH,CACzH;SACJ,CAAC;aACD,QAAQ,CACP,wGAAwG,CACzG,CACJ;aACA,QAAQ,CAAC,iCAAiC,CAAC;KAC/C,CAAC;IAEF,KAAK,CAAC,OAAO,CAAC,KAAK,EAAE,GAAG;QACtB,MAAM,OAAO,GAAG,kBAAkB,EAAE,CAAC;QACrC,MAAM,MAAM,GAAG,MAAM,OAAO,CAAC,YAAY,CACvC;YACE,UAAU,EAAE,KAAK,CAAC,WAAW;YAC7B,KAAK,EAAE,KAAK,CAAC,KAAK;YAClB,OAAO,EAAE,KAAK,CAAC,OAAO;SACvB,EACD,GAAG,CACJ,CAAC;QAEF,GAAG,CAAC,GAAG,CAAC,IAAI,CAAC,eAAe,EAAE;YAC5B,KAAK,EAAE,KAAK,CAAC,KAAK;YAClB,UAAU,EAAE,KAAK,CAAC,WAAW,IAAI,KAAK;YACtC,UAAU,EAAE,MAAM,CAAC,OAAO,CAAC,MAAM;SAClC,CAAC,CAAC;QAEH,OAAO,MAAM,CAAC;IAChB,CAAC;IAED,MAAM,EAAE,CAAC,MAAM,EAAE,EAAE;QACjB,IAAI,MAAM,CAAC,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YAChC,OAAO,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,mBAAmB,EAAE,CAAC,CAAC;QACvD,CAAC;QACD,MAAM,KAAK,GAAa,EAAE,CAAC;QAC3B,KAAK,MAAM,CAAC,IAAI,MAAM,CAAC,OAAO,EAAE,CAAC;YAC/B,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,YAAY,OAAO,CAAC,CAAC,WAAW,GAAG,CAAC,CAAC;YACvD,MAAM,OAAO,GAAa,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC;YACjC,IAAI,CAAC,CAAC,WAAW;gBAAE,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC;YAC/C,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,cAAc,YAAY,CAAC,CAAC;YAC9C,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,WAAW,KAAK,IAAI,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,WAAW,QAAQ,CAAC,CAAC;YAC9E,IAAI,CAAC,CAAC,IAAI;gBAAE,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC;YACjC,KAAK,CAAC,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC;YAChC,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QACjB,CAAC;QACD,OAAO,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,OAAO,EAAE,EAAE,CAAC,CAAC;IAC9D,CAAC;CACF,CAAC,CAAC"}

package/dist/mcp-server/tools/definitions/search-entities.tool.d.ts

@@ -27,6 +27,8 @@ export declare const searchEntitiesTool: import("@cyanheads/mcp-ts-core").ToolDe
     select: z.ZodOptional<z.ZodArray<z.ZodString>>;
     per_page: z.ZodDefault<z.ZodNumber>;
     cursor: z.ZodOptional<z.ZodString>;
+    sample: z.ZodOptional<z.ZodNumber>;
+    seed: z.ZodOptional<z.ZodString>;
 }, z.core.$strip>, z.ZodObject<{
     meta: z.ZodObject<{
         count: z.ZodNumber;
@@ -40,9 +42,19 @@ export declare const searchEntitiesTool: import("@cyanheads/mcp-ts-core").ToolDe
     }, z.core.$loose>>;
 }, z.core.$strip>, readonly [{
     readonly reason: "semantic_per_page_cap";
-    readonly code: JsonRpcErrorCode.InvalidParams;
+    readonly code: JsonRpcErrorCode.ValidationError;
     readonly when: "per_page exceeds the semantic-search cap of 50.";
     readonly recovery: "Reduce per_page to 50 or less, or switch search_mode to keyword.";
+}, {
+    readonly reason: "sample_with_cursor";
+    readonly code: JsonRpcErrorCode.ValidationError;
+    readonly when: "Both `sample` and `cursor` were provided.";
+    readonly recovery: "Sampling returns a single page only; remove `cursor` or remove `sample`.";
+}, {
+    readonly reason: "seed_without_sample";
+    readonly code: JsonRpcErrorCode.ValidationError;
+    readonly when: "`seed` was provided without `sample`.";
+    readonly recovery: "Pass `sample` to enable random sampling, or remove `seed`.";
 }, {
     readonly reason: "entity_not_found";
     readonly code: JsonRpcErrorCode.NotFound;
@@ -68,7 +80,7 @@ export declare const searchEntitiesTool: import("@cyanheads/mcp-ts-core").ToolDe
     readonly reason: "upstream_invalid_params";
     readonly code: JsonRpcErrorCode.InvalidParams;
     readonly when: "OpenAlex rejected the request as malformed (HTTP 400).";
-    readonly recovery: "Check filter syntax, sort field, and select field names against the OpenAlex documentation.";
+    readonly recovery: "Read the upstream message for the rejected token, then retry after correcting the filter operator, sort field, or select field name it names.";
 }, {
     readonly reason: "upstream_validation_failed";
     readonly code: JsonRpcErrorCode.ValidationError;

package/dist/mcp-server/tools/definitions/search-entities.tool.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"search-entities.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/search-entities.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AAiJjE,eAAO,MAAM,kBAAkB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAgN7B,CAAC"}
+{"version":3,"file":"search-entities.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/search-entities.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AAsJjE,eAAO,MAAM,kBAAkB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GA6P7B,CAAC"}

package/dist/mcp-server/tools/definitions/search-entities.tool.js

@@ -7,6 +7,7 @@ import { JsonRpcErrorCode } from '@cyanheads/mcp-ts-core/errors';
 import { getOpenAlexService } from '../../../services/openalex/openalex-service.js';
 import { ENTITY_TYPES } from '../../../services/openalex/types.js';
 const SEMANTIC_PER_PAGE_CAP = 50;
+const SAMPLE_MAX = 100;
 const ACRONYMS = new Set([
     'apc',
     'doi',
@@ -119,19 +120,35 @@ function buildSearchEcho(input) {
     }
     if (input.sort)
         parts.push(`sort=${input.sort}`);
+    if (input.sample !== undefined)
+        parts.push(`sample=${input.sample}`);
+    if (input.seed !== undefined)
+        parts.push(`seed=${input.seed}`);
     return parts.join(' | ');
 }
 export const searchEntitiesTool = tool('openalex_search_entities', {
-    description: 'Search, filter, sort, or retrieve by ID. Covers all OpenAlex entity types (works, authors, sources, institutions, topics, keywords, publishers, funders). Pass `id` to retrieve a single entity (free, unlimited API calls). Otherwise, use `query` and/or `filters` for discovery. Supports keyword search with boolean operators, exact phrase matching, and AI semantic search. Use openalex_resolve_name to resolve names to IDs before filtering. Searches return a curated set of fields by default; pass `select` to override with specific fields.',
+    description: 'Search, filter, sort, or retrieve by ID. Covers all OpenAlex entity types (works, authors, sources, institutions, topics, keywords, publishers, funders). Pass `id` to retrieve a single entity. Otherwise, use `query` and/or `filters` for discovery. Supports keyword search with boolean operators, exact phrase matching, and AI semantic search. Use openalex_resolve_name to resolve names to IDs before filtering. Searches return a curated set of fields by default; pass `select` to override with specific fields.',
     sourceUrl: 'https://github.com/cyanheads/openalex-mcp-server/blob/main/src/mcp-server/tools/definitions/search-entities.tool.ts',
     annotations: { readOnlyHint: true, idempotentHint: true, openWorldHint: true },
     errors: [
         {
             reason: 'semantic_per_page_cap',
-            code: JsonRpcErrorCode.InvalidParams,
+            code: JsonRpcErrorCode.ValidationError,
             when: `per_page exceeds the semantic-search cap of ${SEMANTIC_PER_PAGE_CAP}.`,
             recovery: `Reduce per_page to ${SEMANTIC_PER_PAGE_CAP} or less, or switch search_mode to keyword.`,
         },
+        {
+            reason: 'sample_with_cursor',
+            code: JsonRpcErrorCode.ValidationError,
+            when: 'Both `sample` and `cursor` were provided.',
+            recovery: 'Sampling returns a single page only; remove `cursor` or remove `sample`.',
+        },
+        {
+            reason: 'seed_without_sample',
+            code: JsonRpcErrorCode.ValidationError,
+            when: '`seed` was provided without `sample`.',
+            recovery: 'Pass `sample` to enable random sampling, or remove `seed`.',
+        },
         {
             reason: 'entity_not_found',
             code: JsonRpcErrorCode.NotFound,
@@ -161,7 +178,7 @@ export const searchEntitiesTool = tool('openalex_search_entities', {
             reason: 'upstream_invalid_params',
             code: JsonRpcErrorCode.InvalidParams,
             when: 'OpenAlex rejected the request as malformed (HTTP 400).',
-            recovery: 'Check filter syntax, sort field, and select field names against the OpenAlex documentation.',
+            recovery: 'Read the upstream message for the rejected token, then retry after correcting the filter operator, sort field, or select field name it names.',
         },
         {
             reason: 'upstream_validation_failed',
@@ -187,7 +204,7 @@ export const searchEntitiesTool = tool('openalex_search_entities', {
         filters: z
             .record(z.string(), z.string())
             .optional()
-            .describe('Filter criteria as field:value pairs. AND across fields (multiple keys). OR within field: pipe-separate ("us|gb"). NOT: prefix "!" ("!us"). Range: "2020-2024". Comparison: ">100", "<50". AND within same field: "+"-separate. Use OpenAlex IDs (not names) for entity filters — resolve names first.'),
+            .describe('Filter criteria as field:value pairs. AND across fields (multiple keys). OR within field: pipe-separate ("us|gb"). NOT: prefix "!" ("!us"). Range: "2020-2024". Comparison: ">100", "<50". AND within same field: "+"-separate. Use OpenAlex IDs (not names) for entity filters — resolve names first. Common keys: `openalex` (filter by entity ID, e.g. {"openalex": "W123|W456"}), `cites` (works citing a given work), `publication_year` (range "2020-2024"), `authorships.author.id`, `type`, `is_oa`.'),
         sort: z
             .string()
             .optional()
@@ -207,6 +224,17 @@ export const searchEntitiesTool = tool('openalex_search_entities', {
             .string()
             .optional()
             .describe('Pagination cursor from a previous response. Pass to get the next page.'),
+        sample: z
+            .number()
+            .int()
+            .min(1)
+            .max(SAMPLE_MAX)
+            .optional()
+            .describe(`Return a random sample of this many entities matching the filters (1-${SAMPLE_MAX}). Single page only — pagination via \`cursor\` is not supported with sampling. Overrides \`per_page\`. Useful for unbiased exploration: spot-checking filter correctness, stratified review prompts, or generating exploration sets without bias toward most-cited.`),
+        seed: z
+            .string()
+            .optional()
+            .describe('Deterministic seed for `sample`. Same seed + same filters = same results — pass when reproducibility matters. Has no effect (and is rejected) without `sample`.'),
     }),
     output: z.object({
         meta: z
@@ -241,6 +269,12 @@ export const searchEntitiesTool = tool('openalex_search_entities', {
                 cap: SEMANTIC_PER_PAGE_CAP,
             });
         }
+        if (input.sample !== undefined && input.cursor !== undefined) {
+            throw ctx.fail('sample_with_cursor', 'Sampling returns one page only — `sample` cannot be combined with `cursor` pagination.', { ...ctx.recoveryFor('sample_with_cursor'), sample: input.sample, cursor: input.cursor });
+        }
+        if (input.seed !== undefined && input.sample === undefined) {
+            throw ctx.fail('seed_without_sample', '`seed` is only meaningful with `sample` — pass `sample` to enable random sampling.', { ...ctx.recoveryFor('seed_without_sample'), seed: input.seed });
+        }
         const service = getOpenAlexService();
         const result = await service.search({
             entityType: input.entity_type,
@@ -252,6 +286,8 @@ export const searchEntitiesTool = tool('openalex_search_entities', {
             select: input.select,
             perPage: input.per_page,
             cursor: input.cursor,
+            sample: input.sample,
+            seed: input.seed,
         }, ctx);
         ctx.log.info('Search completed', {
             entityType: input.entity_type,

package/dist/mcp-server/tools/definitions/search-entities.tool.js.map

@@ -1 +1 @@
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package/dist/services/openalex/openalex-service.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"openalex-service.d.ts","sourceRoot":"","sources":["../../../src/services/openalex/openalex-service.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,wBAAwB,CAAC;AAoBtD,OAAO,EACL,KAAK,aAAa,EAClB,KAAK,aAAa,EAClB,KAAK,kBAAkB,EACvB,KAAK,kBAAkB,EAIvB,KAAK,YAAY,EACjB,KAAK,YAAY,EAClB,MAAM,YAAY,CAAC;AAyVpB,cAAM,eAAe;IACnB,OAAO,CAAC,QAAQ,CAAC,OAAO,CAAS;IACjC,OAAO,CAAC,QAAQ,CAAC,MAAM,CAAS;;IAQhC,yFAAyF;IACzF,OAAO,CAAC,OAAO;IAkCf,OAAO,CAAC,2BAA2B;IA8BnC,OAAO,CAAC,aAAa;IAqCrB,sEAAsE;IAChE,MAAM,CAAC,MAAM,EAAE,YAAY,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,YAAY,CAAC;IA6EvE,4BAA4B;IACtB,OAAO,CAAC,MAAM,EAAE,aAAa,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,aAAa,CAAC;IAgC1E,oCAAoC;IAC9B,YAAY,CAAC,MAAM,EAAE,kBAAkB,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,kBAAkB,CAAC;CAuB1F;AAID,wBAAgB,mBAAmB,IAAI,IAAI,CAE1C;AAED,wBAAgB,kBAAkB,IAAI,eAAe,CAIpD"}

package/dist/services/openalex/openalex-service.js

@@ -159,6 +159,26 @@ function normalizeAutocompleteRecords(results) {
  * output validation downstream of a successful API call.
  */
 const REQUIRED_SEARCH_FIELDS = ['id', 'display_name'];
+/**
+ * Works-only `select` field aliases. LLM callers reach for intuitive names that don't match
+ * OpenAlex's vocabulary; renaming on the way out keeps tool ergonomics aligned with caller
+ * priors. Pure key renames — no value transformation. Canonical names pass through unchanged.
+ */
+const SELECT_ALIASES_WORKS = {
+    abstract: 'abstract_inverted_index',
+    authors: 'authorships',
+    year: 'publication_year',
+};
+/**
+ * Works-only `filter` key aliases. Same shape as `SELECT_ALIASES_WORKS` — LLM callers reach
+ * for `cited_works` (the semantic phrasing) and `year` (universal in REST), neither of which
+ * upstream accepts. Renames are fail-open: misses pass through to upstream and surface its
+ * helpful 400 with the valid-field list.
+ */
+const FILTER_ALIASES_WORKS = {
+    cited_works: 'cites',
+    year: 'publication_year',
+};
 /**
  * Translate caller-friendly aliases in `select` to the upstream OpenAlex field name and
  * guarantee the schema-required fields (`id`, `display_name`) are always projected.
@@ -170,7 +190,38 @@ function translateSelect(entityType, fields) {
     const withRequired = Array.from(new Set([...REQUIRED_SEARCH_FIELDS, ...fields]));
     if (entityType !== 'works')
         return withRequired;
-    return withRequired.map((field) => (field === 'abstract' ? 'abstract_inverted_index' : field));
+    return withRequired.map((field) => SELECT_ALIASES_WORKS[field] ?? field);
+}
+/**
+ * Match a single bare or URL-form OpenAlex ID. Combined with pipe-splitting in
+ * `isOpenAlexFilterValue` to detect OR-joined ID lists.
+ */
+const OPENALEX_ID_VALUE_PATTERN = /^(?:https:\/\/openalex\.org\/)?[WAISTKPFCG]\d+$/;
+/**
+ * Detect a value the `id:` filter would carry — a bare or URL-form OpenAlex ID, optionally
+ * pipe-joined for OR semantics. When matched, we rewrite `id` → `openalex` (the canonical
+ * filter key); the URL form passes through unchanged because upstream accepts both.
+ * Stricter than a single regex so a future generic upstream `id:` filter wouldn't be shadowed
+ * by our rewrite — only values that look like OpenAlex IDs get redirected.
+ */
+function isOpenAlexFilterValue(value) {
+    return value.split('|').every((seg) => OPENALEX_ID_VALUE_PATTERN.test(seg));
+}
+/**
+ * Rewrite caller-supplied filter keys to the upstream OpenAlex names. Works-only key map plus
+ * a universal `id` → `openalex` rewrite when the value looks like an OpenAlex ID. Values pass
+ * through unchanged. Misses fall through so upstream's 400 with the valid-field list still
+ * fires for typos no map can preempt.
+ */
+function translateFilters(entityType, filters) {
+    const aliases = entityType === 'works' ? FILTER_ALIASES_WORKS : undefined;
+    const out = {};
+    for (const [rawKey, value] of Object.entries(filters)) {
+        const aliased = aliases?.[rawKey] ?? rawKey;
+        const finalKey = aliased === 'id' && isOpenAlexFilterValue(value) ? 'openalex' : aliased;
+        out[finalKey] = value;
+    }
+    return out;
 }
 const MAX_ATTEMPTS = 3;
 const BASE_BACKOFF_MS = 1000;
@@ -365,7 +416,7 @@ class OpenAlexService {
             queryParams[getSearchParamKey(params.searchMode)] = params.query;
         }
         if (hasEntries(params.filters)) {
-            queryParams.filter = buildFilterString(params.filters);
+            queryParams.filter = buildFilterString(translateFilters(params.entityType, params.filters));
         }
         const sort = normalizeSort(params.sort);
         if (sort) {
@@ -376,9 +427,22 @@ class OpenAlexService {
         if (select.length > 0) {
             queryParams.select = select.join(',');
         }
-        queryParams.per_page = String(params.perPage ?? 25);
-        // Semantic search doesn't support cursor pagination — use page/per_page only
-        if (params.searchMode !== 'semantic') {
+        // Sampling overrides per_page — upstream truncates results at per_page even when
+        // sample is larger, which silently drops samples the caller asked for. Aligning the
+        // two means callers get exactly `sample` results in a single page.
+        if (params.sample !== undefined) {
+            queryParams.sample = String(params.sample);
+            queryParams.per_page = String(params.sample);
+            if (params.seed !== undefined)
+                queryParams.seed = params.seed;
+        }
+        else {
+            queryParams.per_page = String(params.perPage ?? 25);
+        }
+        // Semantic search doesn't support cursor pagination — use page/per_page only.
+        // Sampling returns one page only — cursor is mutually exclusive (enforced at the tool
+        // layer; the service never sends both).
+        if (params.searchMode !== 'semantic' && params.sample === undefined) {
             queryParams.cursor = params.cursor ?? '*';
         }
         const data = (await this.request(`/${params.entityType}`, queryParams, ctx));
@@ -397,7 +461,7 @@ class OpenAlexService {
             ? `${params.groupBy}:include_unknown`
             : params.groupBy;
         if (hasEntries(params.filters)) {
-            queryParams.filter = buildFilterString(params.filters);
+            queryParams.filter = buildFilterString(translateFilters(params.entityType, params.filters));
         }
         // Only send cursor when explicitly provided — boolean group_by fields
         // (is_retracted, has_orcid, etc.) reject cursor pagination entirely.

package/dist/services/openalex/openalex-service.js.map

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package/dist/services/openalex/types.d.ts

@@ -16,7 +16,9 @@ export interface SearchParams {
     id?: string | undefined;
     perPage?: number | undefined;
     query?: string | undefined;
+    sample?: number | undefined;
     searchMode?: 'keyword' | 'exact' | 'semantic' | undefined;
+    seed?: string | undefined;
     select?: string[] | undefined;
     sort?: string | undefined;
 }

package/dist/services/openalex/types.d.ts.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@cyanheads/openalex-mcp-server",
-  "version": "0.6.7",
+  "version": "0.6.9",
   "description": "Access the OpenAlex academic research catalog - 270M+ publications through MCP. STDIO & Streamable HTTP.",
   "mcpName": "io.github.cyanheads/openalex-mcp-server",
   "type": "module",
@@ -60,7 +60,7 @@
   },
   "license": "Apache-2.0",
   "engines": {
-    "node": ">=22.0.0",
+    "node": ">=24.0.0",
     "bun": ">=1.3.0"
   },
   "packageManager": "bun@1.3.11",
@@ -68,12 +68,12 @@
     "access": "public"
   },
   "dependencies": {
-    "@cyanheads/mcp-ts-core": "^0.8.12",
+    "@cyanheads/mcp-ts-core": "^0.8.19",
     "pino-pretty": "^13.1.3"
   },
   "devDependencies": {
     "@biomejs/biome": "^2.4.14",
-    "@types/node": "^25.6.0",
+    "@types/node": "^25.6.2",
     "depcheck": "^1.4.7",
     "ignore": "^7.0.5",
     "tsc-alias": "^1.8.17",

package/server.json

@@ -6,7 +6,7 @@
     "url": "https://github.com/cyanheads/openalex-mcp-server",
     "source": "github"
   },
-  "version": "0.6.7",
+  "version": "0.6.9",
   "remotes": [
     {
       "type": "streamable-http",
@@ -19,7 +19,7 @@
       "registryBaseUrl": "https://registry.npmjs.org",
       "identifier": "@cyanheads/openalex-mcp-server",
       "runtimeHint": "node",
-      "version": "0.6.7",
+      "version": "0.6.9",
       "packageArguments": [
         {
           "type": "positional",
@@ -61,7 +61,7 @@
       "registryBaseUrl": "https://registry.npmjs.org",
       "identifier": "@cyanheads/openalex-mcp-server",
       "runtimeHint": "node",
-      "version": "0.6.7",
+      "version": "0.6.9",
       "packageArguments": [
         {
           "type": "positional",