@cyanheads/openalex-mcp-server 0.6.2 → 0.6.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (15) hide show
  1. package/CLAUDE.md +1 -1
  2. package/README.md +1 -1
  3. package/dist/mcp-server/tools/definitions/analyze-trends.tool.d.ts +1 -0
  4. package/dist/mcp-server/tools/definitions/analyze-trends.tool.d.ts.map +1 -1
  5. package/dist/mcp-server/tools/definitions/analyze-trends.tool.js +20 -4
  6. package/dist/mcp-server/tools/definitions/analyze-trends.tool.js.map +1 -1
  7. package/dist/mcp-server/tools/definitions/search-entities.tool.d.ts +1 -0
  8. package/dist/mcp-server/tools/definitions/search-entities.tool.d.ts.map +1 -1
  9. package/dist/mcp-server/tools/definitions/search-entities.tool.js +78 -9
  10. package/dist/mcp-server/tools/definitions/search-entities.tool.js.map +1 -1
  11. package/dist/services/openalex/openalex-service.d.ts.map +1 -1
  12. package/dist/services/openalex/openalex-service.js +77 -7
  13. package/dist/services/openalex/openalex-service.js.map +1 -1
  14. package/package.json +2 -2
  15. package/server.json +3 -3
package/CLAUDE.md CHANGED
@@ -1,7 +1,7 @@
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  # Agent Protocol
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  **Server:** openalex-mcp-server
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- **Version:** 0.6.2
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+ **Version:** 0.6.3
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  **Framework:** [@cyanheads/mcp-ts-core](https://www.npmjs.com/package/@cyanheads/mcp-ts-core)
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  > **Read the framework docs first:** `node_modules/@cyanheads/mcp-ts-core/CLAUDE.md` contains the full API reference — builders, Context, error codes, exports, patterns. This file covers server-specific conventions only.
package/README.md CHANGED
@@ -6,7 +6,7 @@
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  <div align="center">
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8
 
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- [![Version](https://img.shields.io/badge/Version-0.6.2-blue.svg?style=flat-square)](./CHANGELOG.md) [![Framework](https://img.shields.io/badge/Built%20on-@cyanheads/mcp--ts--core-259?style=flat-square)](https://www.npmjs.com/package/@cyanheads/mcp-ts-core) [![MCP SDK](https://img.shields.io/badge/MCP%20SDK-^1.29.0-green.svg?style=flat-square)](https://modelcontextprotocol.io/) [![License](https://img.shields.io/badge/License-Apache%202.0-orange.svg?style=flat-square)](./LICENSE) [![TypeScript](https://img.shields.io/badge/TypeScript-^6.0.3-3178C6.svg?style=flat-square)](https://www.typescriptlang.org/)
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+ [![Version](https://img.shields.io/badge/Version-0.6.3-blue.svg?style=flat-square)](./CHANGELOG.md) [![Framework](https://img.shields.io/badge/Built%20on-@cyanheads/mcp--ts--core-259?style=flat-square)](https://www.npmjs.com/package/@cyanheads/mcp-ts-core) [![MCP SDK](https://img.shields.io/badge/MCP%20SDK-^1.29.0-green.svg?style=flat-square)](https://modelcontextprotocol.io/) [![License](https://img.shields.io/badge/License-Apache%202.0-orange.svg?style=flat-square)](./LICENSE) [![TypeScript](https://img.shields.io/badge/TypeScript-^6.0.3-3178C6.svg?style=flat-square)](https://www.typescriptlang.org/)
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  </div>
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package/dist/mcp-server/tools/definitions/analyze-trends.tool.d.ts CHANGED
@@ -23,6 +23,7 @@ export declare const analyzeTrendsTool: import("@cyanheads/mcp-ts-core").ToolDef
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  count: z.ZodNumber;
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  groups_count: z.ZodNullable<z.ZodNumber>;
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  next_cursor: z.ZodNullable<z.ZodString>;
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+ echo: z.ZodString;
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  }, z.core.$strip>;
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  groups: z.ZodArray<z.ZodObject<{
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  key: z.ZodString;
package/dist/mcp-server/tools/definitions/analyze-trends.tool.d.ts.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"analyze-trends.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/analyze-trends.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AAIjD,eAAO,MAAM,iBAAiB;;;;;;;;;;;;;;;;;;;;;;;;;;kBAuG5B,CAAC"}
1
+ {"version":3,"file":"analyze-trends.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/analyze-trends.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AAIjD,eAAO,MAAM,iBAAiB;;;;;;;;;;;;;;;;;;;;;;;;;;;kBAiH5B,CAAC"}
package/dist/mcp-server/tools/definitions/analyze-trends.tool.js CHANGED
@@ -25,7 +25,7 @@ export const analyzeTrendsTool = tool('openalex_analyze_trends', {
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  cursor: z
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  .string()
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  .optional()
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- .describe('Pagination cursor from a previous response. Group-by returns max 200 groups per page. Pass cursor to get the next page. Note: paginated groups are sorted by key, not by count.'),
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+ .describe('Pagination cursor from a previous response. Group-by returns max 200 groups per page. Pass cursor to get the next page. The first page is sorted by count descending; subsequent pages (cursor pages) are sorted by key, not by count.'),
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  }),
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  output: z.object({
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  meta: z
@@ -36,6 +36,9 @@ export const analyzeTrendsTool = tool('openalex_analyze_trends', {
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  .string()
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  .nullable()
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  .describe('Cursor for next page of groups. null if no more groups.'),
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+ echo: z
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+ .string()
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+ .describe('Compact echo of the input criteria (entity_type, group_by, filters) — useful when no groups are returned so callers see what was actually requested.'),
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  })
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  .describe('Aggregation metadata.'),
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  groups: z
@@ -63,14 +66,18 @@ export const analyzeTrendsTool = tool('openalex_analyze_trends', {
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  totalCount: result.meta.count,
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  groupCount: result.groups.length,
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  });
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- return result;
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+ return {
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+ meta: { ...result.meta, echo: buildAnalyzeEcho(input) },
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+ groups: result.groups,
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+ };
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  },
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  format: (result) => {
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+ const heading = `${result.meta.count} total entities across ${result.meta.groups_count ?? result.groups.length} groups on this page (${result.meta.echo})`;
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  if (result.groups.length === 0) {
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  return [
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  {
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  type: 'text',
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- text: `No groups found. (count=${result.meta.count}, groups_count=${result.meta.groups_count ?? 0})`,
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+ text: `No groups found for ${result.meta.echo}. (count=${result.meta.count}, groups_count=${result.meta.groups_count ?? 0})\n\nTry removing filters or grouping by a different field.`,
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  },
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  ];
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  }
@@ -84,9 +91,18 @@ export const analyzeTrendsTool = tool('openalex_analyze_trends', {
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  return [
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  {
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  type: 'text',
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- text: `${result.meta.count} total entities across ${result.meta.groups_count ?? result.groups.length} groups on this page:\n\n${lines.join('\n')}${footer}`,
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+ text: `${heading}:\n\n${lines.join('\n')}${footer}`,
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  },
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  ];
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  },
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  });
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+ function buildAnalyzeEcho(input) {
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+ const parts = [`entity_type=${input.entity_type}`, `group_by=${input.group_by}`];
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+ if (input.filters && Object.keys(input.filters).length > 0) {
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+ parts.push(`filters=${JSON.stringify(input.filters)}`);
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+ }
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+ if (input.include_unknown)
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+ parts.push('include_unknown=true');
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+ return parts.join(' | ');
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+ }
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  //# sourceMappingURL=analyze-trends.tool.js.map
package/dist/mcp-server/tools/definitions/analyze-trends.tool.js.map CHANGED
@@ -1 +1 @@
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package/dist/mcp-server/tools/definitions/search-entities.tool.d.ts CHANGED
@@ -31,6 +31,7 @@ export declare const searchEntitiesTool: import("@cyanheads/mcp-ts-core").ToolDe
31
31
  count: z.ZodNumber;
32
32
  per_page: z.ZodNumber;
33
33
  next_cursor: z.ZodNullable<z.ZodString>;
34
+ echo: z.ZodString;
34
35
  }, z.core.$strip>;
35
36
  results: z.ZodArray<z.ZodObject<{
36
37
  id: z.ZodString;
package/dist/mcp-server/tools/definitions/search-entities.tool.d.ts.map CHANGED
@@ -1 +1 @@
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1
+ {"version":3,"file":"search-entities.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/search-entities.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AAkJjD,eAAO,MAAM,kBAAkB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;kBAwJ7B,CAAC"}
package/dist/mcp-server/tools/definitions/search-entities.tool.js CHANGED
@@ -3,8 +3,10 @@
3
3
  * @module mcp-server/tools/definitions/search-entities.tool
4
4
  */
5
5
  import { tool, z } from '@cyanheads/mcp-ts-core';
6
+ import { invalidParams } from '@cyanheads/mcp-ts-core/errors';
6
7
  import { getOpenAlexService } from '../../../services/openalex/openalex-service.js';
7
8
  import { ENTITY_TYPES } from '../../../services/openalex/types.js';
9
+ const SEMANTIC_PER_PAGE_CAP = 50;
8
10
  const ACRONYMS = new Set([
9
11
  'apc',
10
12
  'doi',
@@ -33,11 +35,45 @@ function isScalar(value) {
33
35
  function isScalarOrNull(value) {
34
36
  return value === null || isScalar(value);
35
37
  }
38
+ function isPlainObject(value) {
39
+ return value !== null && typeof value === 'object' && !Array.isArray(value);
40
+ }
36
41
  function formatScalar(value) {
37
42
  return String(value);
38
43
  }
39
- function renderJsonField(label, value) {
40
- return `**${label}:**\n\`\`\`json\n${JSON.stringify(value, null, 2)}\n\`\`\``;
44
+ /**
45
+ * Flatten a value to "path: value" strings, one per scalar leaf. Nested objects use dot
46
+ * notation (`subfield.display_name`); arrays of scalars collapse to a single comma-joined
47
+ * pair (`countries: us, gb`); arrays of objects produce one entry per element with bracket
48
+ * indexing (`institutions[0].id`). All terminal values reach the output — `format()` and
49
+ * `structuredContent` stay in parity.
50
+ */
51
+ function flattenLeaves(value, prefix = '') {
52
+ if (value === null || value === undefined) {
53
+ return prefix ? [`${prefix}: —`] : [];
54
+ }
55
+ if (isScalar(value)) {
56
+ return [prefix ? `${prefix}: ${formatScalar(value)}` : formatScalar(value)];
57
+ }
58
+ if (Array.isArray(value)) {
59
+ if (value.length === 0)
60
+ return [`${prefix || 'value'}: (empty)`];
61
+ if (value.every(isScalarOrNull)) {
62
+ const joined = value.map((item) => (item === null ? '—' : formatScalar(item))).join(', ');
63
+ return [prefix ? `${prefix}: ${joined}` : joined];
64
+ }
65
+ return value.flatMap((item, i) => flattenLeaves(item, `${prefix}[${i}]`));
66
+ }
67
+ if (isPlainObject(value)) {
68
+ const entries = Object.entries(value);
69
+ if (entries.length === 0)
70
+ return prefix ? [`${prefix}: (empty)`] : [];
71
+ return entries.flatMap(([k, v]) => flattenLeaves(v, prefix ? `${prefix}.${k}` : k));
72
+ }
73
+ return [prefix ? `${prefix}: ${String(value)}` : String(value)];
74
+ }
75
+ function compactPairs(value) {
76
+ return flattenLeaves(value).join(', ');
41
77
  }
42
78
  function renderField(field, value) {
43
79
  const label = toFieldLabel(field);
@@ -51,8 +87,15 @@ function renderField(field, value) {
51
87
  if (value.every(isScalarOrNull)) {
52
88
  return `**${label}:** ${value.map((item) => (item === null ? '—' : formatScalar(item))).join(', ')}`;
53
89
  }
90
+ const items = value.map((item, i) => isPlainObject(item)
91
+ ? `- [${i}] ${compactPairs(item)}`
92
+ : `- [${i}] ${flattenLeaves(item).join(', ') || '—'}`);
93
+ return `**${label}:**\n${items.join('\n')}`;
54
94
  }
55
- return renderJsonField(label, value);
95
+ if (isPlainObject(value)) {
96
+ return `**${label}:** ${compactPairs(value)}`;
97
+ }
98
+ return `**${label}:** ${String(value)}`;
56
99
  }
57
100
  function renderRecord(record) {
58
101
  const { id, display_name, ...rest } = record;
@@ -62,6 +105,22 @@ function renderRecord(record) {
62
105
  }
63
106
  return lines;
64
107
  }
108
+ function buildSearchEcho(input) {
109
+ const parts = [`entity_type=${input.entity_type}`];
110
+ if (input.id)
111
+ parts.push(`id=${input.id}`);
112
+ if (input.query)
113
+ parts.push(`query="${input.query}"`);
114
+ if (input.search_mode && input.search_mode !== 'keyword') {
115
+ parts.push(`search_mode=${input.search_mode}`);
116
+ }
117
+ if (input.filters && Object.keys(input.filters).length > 0) {
118
+ parts.push(`filters=${JSON.stringify(input.filters)}`);
119
+ }
120
+ if (input.sort)
121
+ parts.push(`sort=${input.sort}`);
122
+ return parts.join(' | ');
123
+ }
65
124
  export const searchEntitiesTool = tool('openalex_search_entities', {
66
125
  description: 'Search, filter, sort, or retrieve by ID. Covers all OpenAlex entity types (works, authors, sources, institutions, topics, keywords, publishers, funders). Pass `id` to retrieve a single entity (free, unlimited API calls). Otherwise, use `query` and/or `filters` for discovery. Supports keyword search with boolean operators, exact phrase matching, and AI semantic search. Use openalex_resolve_name to resolve names to IDs before filtering. Searches return a curated set of fields by default; pass `select` to override with specific fields.',
67
126
  sourceUrl: 'https://github.com/cyanheads/openalex-mcp-server/blob/main/src/mcp-server/tools/definitions/search-entities.tool.ts',
@@ -87,7 +146,7 @@ export const searchEntitiesTool = tool('openalex_search_entities', {
87
146
  sort: z
88
147
  .string()
89
148
  .optional()
90
- .describe('Sort field. Prefix with "-" for descending. Common: "cited_by_count", "-publication_date", "relevance_score" (default when query present).'),
149
+ .describe('Sort field. Prefix with "-" for descending. Common: "cited_by_count", "-publication_date", "relevance_score" (default when query present). Note: when combined with a keyword query, an explicit sort overrides relevance ranking entirely — top results may be highly cited but only tangentially on-topic. Use "relevance_score" or omit sort to keep the most relevant results first.'),
91
150
  select: z
92
151
  .array(z.string())
93
152
  .optional()
@@ -98,7 +157,7 @@ export const searchEntitiesTool = tool('openalex_search_entities', {
98
157
  .min(1)
99
158
  .max(100)
100
159
  .default(25)
101
- .describe('Results per page (1-100). Default 25.'),
160
+ .describe('Results per page (1-100). Default 25. Semantic search caps at 50 — when search_mode="semantic", set per_page ≤ 50 (also subject to a 1 req/sec rate limit upstream).'),
102
161
  cursor: z
103
162
  .string()
104
163
  .optional()
@@ -113,6 +172,9 @@ export const searchEntitiesTool = tool('openalex_search_entities', {
113
172
  .string()
114
173
  .nullable()
115
174
  .describe('Cursor for next page. null if no more results.'),
175
+ echo: z
176
+ .string()
177
+ .describe('Compact echo of the input criteria (entity_type, query, filters, sort, search_mode) — useful when results are empty so callers see what was actually searched.'),
116
178
  })
117
179
  .describe('Result metadata including pagination.'),
118
180
  results: z
@@ -126,6 +188,9 @@ export const searchEntitiesTool = tool('openalex_search_entities', {
126
188
  .describe('OpenAlex entity objects passed through unchanged. Additional fields depend on entity_type and select.'),
127
189
  }),
128
190
  async handler(input, ctx) {
191
+ if (input.search_mode === 'semantic' && input.per_page > SEMANTIC_PER_PAGE_CAP) {
192
+ throw invalidParams(`Semantic search supports at most ${SEMANTIC_PER_PAGE_CAP} results per page. Reduce per_page or switch search_mode.`, { searchMode: input.search_mode, perPage: input.per_page, cap: SEMANTIC_PER_PAGE_CAP });
193
+ }
129
194
  const service = getOpenAlexService();
130
195
  const result = await service.search({
131
196
  entityType: input.entity_type,
@@ -145,16 +210,20 @@ export const searchEntitiesTool = tool('openalex_search_entities', {
145
210
  resultCount: result.results.length,
146
211
  totalCount: result.meta.count,
147
212
  });
148
- return result;
213
+ return {
214
+ meta: { ...result.meta, echo: buildSearchEcho(input) },
215
+ results: result.results,
216
+ };
149
217
  },
150
218
  format: (result) => {
151
219
  const lines = [];
152
220
  const countLabel = `${result.meta.count} result(s) — ${result.meta.per_page} per page`;
153
- lines.push(result.meta.next_cursor
221
+ const header = result.meta.next_cursor
154
222
  ? `**${countLabel}** — next cursor: \`${result.meta.next_cursor}\``
155
- : `**${countLabel}**`);
223
+ : `**${countLabel}**`;
224
+ lines.push(`${header} | ${result.meta.echo}`);
156
225
  if (result.results.length === 0) {
157
- lines.push('', 'No matches.');
226
+ lines.push('', `No matches for ${result.meta.echo}.`, 'Try broadening the query, removing filters, or switching search_mode.');
158
227
  return [{ type: 'text', text: lines.join('\n') }];
159
228
  }
160
229
  for (const record of result.results) {
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+ {"version":3,"file":"search-entities.tool.js","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/search-entities.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,IAAI,EAAE,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,aAAa,EAAE,MAAM,+BAA+B,CAAC;AAC9D,OAAO,EAAE,kBAAkB,EAAE,MAAM,yCAAyC,CAAC;AAC7E,OAAO,EAAE,YAAY,EAAE,MAAM,8BAA8B,CAAC;AAE5D,MAAM,qBAAqB,GAAG,EAAE,CAAC;AAQjC,MAAM,QAAQ,GAAG,IAAI,GAAG,CAAC;IACvB,KAAK;IACL,KAAK;IACL,MAAM;IACN,IAAI;IACJ,MAAM;IACN,IAAI;IACJ,OAAO;IACP,OAAO;IACP,MAAM;IACN,KAAK;IACL,KAAK;CACN,CAAC,CAAC;AAEH,SAAS,YAAY,CAAC,KAAa;IACjC,OAAO,KAAK;SACT,KAAK,CAAC,SAAS,CAAC;SAChB,MAAM,CAAC,OAAO,CAAC;SACf,GAAG,CAAC,CAAC,IAAI,EAAE,EAAE,CACZ,QAAQ,CAAC,GAAG,CAAC,IAAI,CAAC,WAAW,EAAE,CAAC;QAC9B,CAAC,CAAC,IAAI,CAAC,WAAW,EAAE;QACpB,CAAC,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,WAAW,EAAE,GAAG,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CACjD;SACA,IAAI,CAAC,GAAG,CAAC,CAAC;AACf,CAAC;AAED,SAAS,QAAQ,CAAC,KAAc;IAC9B,OAAO,OAAO,KAAK,KAAK,QAAQ,IAAI,OAAO,KAAK,KAAK,QAAQ,IAAI,OAAO,KAAK,KAAK,SAAS,CAAC;AAC9F,CAAC;AAED,SAAS,cAAc,CAAC,KAAc;IACpC,OAAO,KAAK,KAAK,IAAI,IAAI,QAAQ,CAAC,KAAK,CAAC,CAAC;AAC3C,CAAC;AAED,SAAS,aAAa,CAAC,KAAc;IACnC,OAAO,KAAK,KAAK,IAAI,IAAI,OAAO,KAAK,KAAK,QAAQ,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC;AAC9E,CAAC;AAED,SAAS,YAAY,CAAC,KAAa;IACjC,OAAO,MAAM,CAAC,KAAK,CAAC,CAAC;AACvB,CAAC;AAED;;;;;;GAMG;AACH,SAAS,aAAa,CAAC,KAAc,EAAE,MAAM,GAAG,EAAE;IAChD,IAAI,KAAK,KAAK,IAAI,IAAI,KAAK,KAAK,SAAS,EAAE,CAAC;QAC1C,OAAO,MAAM,CAAC,CAAC,CAAC,CAAC,GAAG,MAAM,KAAK,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;IACxC,CAAC;IACD,IAAI,QAAQ,CAAC,KAAK,CAAC,EAAE,CAAC;QACpB,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,GAAG,MAAM,KAAK,YAAY,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC,CAAC,YAAY,CAAC,KAAK,CAAC,CAAC,CAAC;IAC9E,CAAC;IACD,IAAI,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC;QACzB,IAAI,KAAK,CAAC,MAAM,KAAK,CAAC;YAAE,OAAO,CAAC,GAAG,MAAM,IAAI,OAAO,WAAW,CAAC,CAAC;QACjE,IAAI,KAAK,CAAC,KAAK,CAAC,cAAc,CAAC,EAAE,CAAC;YAChC,MAAM,MAAM,GAAG,KAAK,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,EAAE,CAAC,CAAC,IAAI,KAAK,IAAI,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;YAC1F,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,GAAG,MAAM,KAAK,MAAM,EAAE,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC;QACpD,CAAC;QACD,OAAO,KAAK,CAAC,OAAO,CAAC,CAAC,IAAI,EAAE,CAAC,EAAE,EAAE,CAAC,aAAa,CAAC,IAAI,EAAE,GAAG,MAAM,IAAI,CAAC,GAAG,CAAC,CAAC,CAAC;IAC5E,CAAC;IACD,IAAI,aAAa,CAAC,KAAK,CAAC,EAAE,CAAC;QACzB,MAAM,OAAO,GAAG,MAAM,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC;QACtC,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC;YAAE,OAAO,MAAM,CAAC,CAAC,CAAC,CAAC,GAAG,MAAM,WAAW,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;QACtE,OAAO,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,EAAE,EAAE,CAAC,aAAa,CAAC,CAAC,EAAE,MAAM,CAAC,CAAC,CAAC,GAAG,MAAM,IAAI,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;IACtF,CAAC;IACD,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,GAAG,MAAM,KAAK,MAAM,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC;AAClE,CAAC;AAED,SAAS,YAAY,CAAC,KAA8B;IAClD,OAAO,aAAa,CAAC,KAAK,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;AACzC,CAAC;AAED,SAAS,WAAW,CAAC,KAAa,EAAE,KAAc;IAChD,MAAM,KAAK,GAAG,YAAY,CAAC,KAAK,CAAC,CAAC;IAClC,IAAI,KAAK,IAAI,IAAI;QAAE,OAAO,KAAK,KAAK,OAAO,CAAC;IAC5C,IAAI,QAAQ,CAAC,KAAK,CAAC;QAAE,OAAO,KAAK,KAAK,OAAO,YAAY,CAAC,KAAK,CAAC,EAAE,CAAC;IAEnE,IAAI,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC;QACzB,IAAI,KAAK,CAAC,MAAM,KAAK,CAAC;YAAE,OAAO,KAAK,KAAK,aAAa,CAAC;QACvD,IAAI,KAAK,CAAC,KAAK,CAAC,cAAc,CAAC,EAAE,CAAC;YAChC,OAAO,KAAK,KAAK,OAAO,KAAK,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,EAAE,CAAC,CAAC,IAAI,KAAK,IAAI,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC;QACvG,CAAC;QACD,MAAM,KAAK,GAAG,KAAK,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,CAAC,EAAE,EAAE,CAClC,aAAa,CAAC,IAAI,CAAC;YACjB,CAAC,CAAC,MAAM,CAAC,KAAK,YAAY,CAAC,IAAI,CAAC,EAAE;YAClC,CAAC,CAAC,MAAM,CAAC,KAAK,aAAa,CAAC,IAAI,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,GAAG,EAAE,CACxD,CAAC;QACF,OAAO,KAAK,KAAK,QAAQ,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC;IAC9C,CAAC;IAED,IAAI,aAAa,CAAC,KAAK,CAAC,EAAE,CAAC;QACzB,OAAO,KAAK,KAAK,OAAO,YAAY,CAAC,KAAK,CAAC,EAAE,CAAC;IAChD,CAAC;IAED,OAAO,KAAK,KAAK,OAAO,MAAM,CAAC,KAAK,CAAC,EAAE,CAAC;AAC1C,CAAC;AAED,SAAS,YAAY,CAAC,MAA0B;IAC9C,MAAM,EAAE,EAAE,EAAE,YAAY,EAAE,GAAG,IAAI,EAAE,GAAG,MAAM,CAAC;IAC7C,MAAM,KAAK,GAAG,CAAC,EAAE,EAAE,OAAO,YAAY,IAAI,EAAE,EAAE,EAAE,WAAW,EAAE,EAAE,CAAC,CAAC;IAEjE,KAAK,MAAM,CAAC,KAAK,EAAE,KAAK,CAAC,IAAI,MAAM,CAAC,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC;QAClD,KAAK,CAAC,IAAI,CAAC,WAAW,CAAC,KAAK,EAAE,KAAK,CAAC,CAAC,CAAC;IACxC,CAAC;IAED,OAAO,KAAK,CAAC;AACf,CAAC;AAED,SAAS,eAAe,CAAC,KAOxB;IACC,MAAM,KAAK,GAAG,CAAC,eAAe,KAAK,CAAC,WAAW,EAAE,CAAC,CAAC;IACnD,IAAI,KAAK,CAAC,EAAE;QAAE,KAAK,CAAC,IAAI,CAAC,MAAM,KAAK,CAAC,EAAE,EAAE,CAAC,CAAC;IAC3C,IAAI,KAAK,CAAC,KAAK;QAAE,KAAK,CAAC,IAAI,CAAC,UAAU,KAAK,CAAC,KAAK,GAAG,CAAC,CAAC;IACtD,IAAI,KAAK,CAAC,WAAW,IAAI,KAAK,CAAC,WAAW,KAAK,SAAS,EAAE,CAAC;QACzD,KAAK,CAAC,IAAI,CAAC,eAAe,KAAK,CAAC,WAAW,EAAE,CAAC,CAAC;IACjD,CAAC;IACD,IAAI,KAAK,CAAC,OAAO,IAAI,MAAM,CAAC,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QAC3D,KAAK,CAAC,IAAI,CAAC,WAAW,IAAI,CAAC,SAAS,CAAC,KAAK,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;I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package/dist/services/openalex/openalex-service.d.ts.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"openalex-service.d.ts","sourceRoot":"","sources":["../../../src/services/openalex/openalex-service.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,wBAAwB,CAAC;AAiBtD,OAAO,EACL,KAAK,aAAa,EAClB,KAAK,aAAa,EAClB,KAAK,kBAAkB,EACvB,KAAK,kBAAkB,EAIvB,KAAK,YAAY,EACjB,KAAK,YAAY,EAClB,MAAM,YAAY,CAAC;AAqKpB,cAAM,eAAe;IACnB,OAAO,CAAC,QAAQ,CAAC,OAAO,CAAS;IACjC,OAAO,CAAC,QAAQ,CAAC,MAAM,CAAS;;IAQhC,yFAAyF;IACzF,OAAO,CAAC,OAAO;IAkCf,OAAO,CAAC,2BAA2B;IA0CnC,OAAO,CAAC,aAAa;IA6BrB,sEAAsE;IAChE,MAAM,CAAC,MAAM,EAAE,YAAY,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,YAAY,CAAC;IA6DvE,4BAA4B;IACtB,OAAO,CAAC,MAAM,EAAE,aAAa,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,aAAa,CAAC;IAgC1E,oCAAoC;IAC9B,YAAY,CAAC,MAAM,EAAE,kBAAkB,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,kBAAkB,CAAC;CAuB1F;AAID,wBAAgB,mBAAmB,IAAI,IAAI,CAE1C;AAED,wBAAgB,kBAAkB,IAAI,eAAe,CAIpD"}
1
+ {"version":3,"file":"openalex-service.d.ts","sourceRoot":"","sources":["../../../src/services/openalex/openalex-service.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,wBAAwB,CAAC;AAiBtD,OAAO,EACL,KAAK,aAAa,EAClB,KAAK,aAAa,EAClB,KAAK,kBAAkB,EACvB,KAAK,kBAAkB,EAIvB,KAAK,YAAY,EACjB,KAAK,YAAY,EAClB,MAAM,YAAY,CAAC;AA+OpB,cAAM,eAAe;IACnB,OAAO,CAAC,QAAQ,CAAC,OAAO,CAAS;IACjC,OAAO,CAAC,QAAQ,CAAC,MAAM,CAAS;;IAQhC,yFAAyF;IACzF,OAAO,CAAC,OAAO;IAkCf,OAAO,CAAC,2BAA2B;IA0CnC,OAAO,CAAC,aAAa;IA6BrB,sEAAsE;IAChE,MAAM,CAAC,MAAM,EAAE,YAAY,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,YAAY,CAAC;IAkEvE,4BAA4B;IACtB,OAAO,CAAC,MAAM,EAAE,aAAa,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,aAAa,CAAC;IAgC1E,oCAAoC;IAC9B,YAAY,CAAC,MAAM,EAAE,kBAAkB,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,kBAAkB,CAAC;CAuB1F;AAID,wBAAgB,mBAAmB,IAAI,IAAI,CAE1C;AAED,wBAAgB,kBAAkB,IAAI,eAAe,CAIpD"}
package/dist/services/openalex/openalex-service.js CHANGED
@@ -78,6 +78,57 @@ function reconstructAbstract(invertedIndex) {
78
78
  words.sort((a, b) => a[0] - b[0]);
79
79
  return words.map(([, word]) => word).join(' ');
80
80
  }
81
+ const NAMED_HTML_ENTITIES = {
82
+ amp: '&',
83
+ apos: "'",
84
+ gt: '>',
85
+ lt: '<',
86
+ nbsp: ' ',
87
+ quot: '"',
88
+ };
89
+ const MAX_UNICODE_CODE_POINT = 0x10ffff;
90
+ function codePointToString(code, fallback) {
91
+ return Number.isInteger(code) && code >= 0 && code <= MAX_UNICODE_CODE_POINT
92
+ ? String.fromCodePoint(code)
93
+ : fallback;
94
+ }
95
+ /**
96
+ * Decode HTML entities that OpenAlex sometimes returns in `display_name` and similar fields
97
+ * (e.g. `Nature Clinical Practice Gastroenterology &#38; Hepatology`). Handles numeric
98
+ * (`&#38;`), hex (`&#x27E9;`), and the common named entities. The trailing semicolon is
99
+ * optional — upstream sometimes drops it (`&#38 Hepatology`) and HTML5 parsers tolerate
100
+ * this; matching strictly would leave malformed entities literal in the output. Unknown or
101
+ * out-of-range entities pass through unchanged so we never silently corrupt data.
102
+ */
103
+ function decodeHtmlEntities(input) {
104
+ if (!input.includes('&'))
105
+ return input;
106
+ return input.replace(/&(#x[0-9a-f]+|#\d+|[a-z]+);?/gi, (match, body) => {
107
+ const lower = body.toLowerCase();
108
+ if (lower.startsWith('#x')) {
109
+ return codePointToString(Number.parseInt(lower.slice(2), 16), match);
110
+ }
111
+ if (lower.startsWith('#')) {
112
+ return codePointToString(Number.parseInt(lower.slice(1), 10), match);
113
+ }
114
+ return NAMED_HTML_ENTITIES[lower] ?? match;
115
+ });
116
+ }
117
+ /** Recursively decode HTML entities in every string leaf of a JSON value. */
118
+ function deepDecodeHtmlEntities(value) {
119
+ if (typeof value === 'string')
120
+ return decodeHtmlEntities(value);
121
+ if (Array.isArray(value))
122
+ return value.map(deepDecodeHtmlEntities);
123
+ if (isRecord(value)) {
124
+ const next = {};
125
+ for (const [k, v] of Object.entries(value)) {
126
+ next[k] = deepDecodeHtmlEntities(v);
127
+ }
128
+ return next;
129
+ }
130
+ return value;
131
+ }
81
132
  function isRecord(value) {
82
133
  return value !== null && typeof value === 'object' && !Array.isArray(value);
83
134
  }
@@ -86,16 +137,33 @@ function hasAbstractInvertedIndex(record) {
86
137
  }
87
138
  function normalizeEntityRecord(record) {
88
139
  if (!hasAbstractInvertedIndex(record))
89
- return record;
140
+ return deepDecodeHtmlEntities(record);
90
141
  const { abstract_inverted_index, ...rest } = record;
142
+ // Decode keys via the reconstructed abstract — `deepDecodeHtmlEntities` only walks
143
+ // values, so entities living in inverted-index word keys (e.g. `"&amp;"`) would
144
+ // otherwise survive into the plaintext output.
91
145
  return {
92
- ...rest,
93
- abstract: reconstructAbstract(abstract_inverted_index),
146
+ ...deepDecodeHtmlEntities(rest),
147
+ abstract: decodeHtmlEntities(reconstructAbstract(abstract_inverted_index)),
94
148
  };
95
149
  }
96
150
  function normalizeEntityRecords(results) {
97
151
  return results.map(normalizeEntityRecord);
98
152
  }
153
+ function normalizeAutocompleteRecords(results) {
154
+ return results.map((r) => deepDecodeHtmlEntities(r));
155
+ }
156
+ /**
157
+ * Translate caller-friendly aliases in `select` to the upstream OpenAlex field name.
158
+ * `abstract` is reconstructed from `abstract_inverted_index` in the response — the API
159
+ * itself only accepts the latter — so we accept either on input and forward the upstream
160
+ * name. Keeps tool ergonomics symmetric with the response shape.
161
+ */
162
+ function translateSelect(entityType, fields) {
163
+ if (entityType !== 'works')
164
+ return fields;
165
+ return fields.map((field) => (field === 'abstract' ? 'abstract_inverted_index' : field));
166
+ }
99
167
  const MAX_ATTEMPTS = 3;
100
168
  const BASE_BACKOFF_MS = 1000;
101
169
  const REQUEST_TIMEOUT_MS = 10_000;
@@ -250,7 +318,9 @@ class OpenAlexService {
250
318
  // Singleton lookup by ID
251
319
  if (params.id) {
252
320
  const normalizedId = normalizeId(params.id);
253
- const queryParams = params.select?.length ? { select: params.select.join(',') } : {};
321
+ const queryParams = params.select?.length
322
+ ? { select: translateSelect(params.entityType, params.select).join(',') }
323
+ : {};
254
324
  const data = (await this.request(`/${params.entityType}/${normalizedId}`, queryParams, ctx));
255
325
  return {
256
326
  meta: { count: 1, per_page: 1, next_cursor: null },
@@ -270,7 +340,7 @@ class OpenAlexService {
270
340
  // Translate "-field" prefix to "field:desc" (OpenAlex API syntax)
271
341
  queryParams.sort = sort;
272
342
  }
273
- const select = params.select?.length ? params.select : DEFAULT_SELECT[params.entityType];
343
+ const select = translateSelect(params.entityType, params.select?.length ? params.select : DEFAULT_SELECT[params.entityType]);
274
344
  if (select.length > 0) {
275
345
  queryParams.select = select.join(',');
276
346
  }
@@ -309,7 +379,7 @@ class OpenAlexService {
309
379
  groups_count: data.meta.groups_count ?? data.group_by?.length ?? null,
310
380
  next_cursor: data.meta.next_cursor ?? null,
311
381
  },
312
- groups: data.group_by ?? [],
382
+ groups: deepDecodeHtmlEntities(data.group_by ?? []),
313
383
  };
314
384
  }
315
385
  /** Autocomplete name resolution. */
@@ -327,7 +397,7 @@ class OpenAlexService {
327
397
  const results = params.entityType
328
398
  ? data.results
329
399
  : data.results.filter((r) => KNOWN_AUTOCOMPLETE_TYPES.has(r.entity_type));
330
- return { results };
400
+ return { results: normalizeAutocompleteRecords(results) };
331
401
  }
332
402
  }
333
403
  let _service;
package/dist/services/openalex/openalex-service.js.map CHANGED
@@ -1 +1 @@
1
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package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@cyanheads/openalex-mcp-server",
3
- "version": "0.6.2",
3
+ "version": "0.6.3",
4
4
  "description": "Access the OpenAlex academic research catalog - 270M+ publications through MCP. STDIO & Streamable HTTP.",
5
5
  "mcpName": "io.github.cyanheads/openalex-mcp-server",
6
6
  "type": "module",
@@ -70,7 +70,7 @@
70
70
  "access": "public"
71
71
  },
72
72
  "dependencies": {
73
- "@cyanheads/mcp-ts-core": "^0.7.4",
73
+ "@cyanheads/mcp-ts-core": "^0.7.5",
74
74
  "pino-pretty": "^13.1.3"
75
75
  },
76
76
  "devDependencies": {
package/server.json CHANGED
@@ -6,7 +6,7 @@
6
6
  "url": "https://github.com/cyanheads/openalex-mcp-server",
7
7
  "source": "github"
8
8
  },
9
- "version": "0.6.2",
9
+ "version": "0.6.3",
10
10
  "remotes": [
11
11
  {
12
12
  "type": "streamable-http",
@@ -19,7 +19,7 @@
19
19
  "registryBaseUrl": "https://registry.npmjs.org",
20
20
  "identifier": "@cyanheads/openalex-mcp-server",
21
21
  "runtimeHint": "node",
22
- "version": "0.6.2",
22
+ "version": "0.6.3",
23
23
  "packageArguments": [
24
24
  {
25
25
  "type": "positional",
@@ -61,7 +61,7 @@
61
61
  "registryBaseUrl": "https://registry.npmjs.org",
62
62
  "identifier": "@cyanheads/openalex-mcp-server",
63
63
  "runtimeHint": "node",
64
- "version": "0.6.2",
64
+ "version": "0.6.3",
65
65
  "packageArguments": [
66
66
  {
67
67
  "type": "positional",