@cyanheads/openalex-mcp-server 0.6.13 → 0.6.15

package/CLAUDE.md

@@ -1,8 +1,8 @@
 # Agent Protocol
 
 **Server:** openalex-mcp-server
-**Version:** 0.6.13
-**Framework:** [@cyanheads/mcp-ts-core](https://www.npmjs.com/package/@cyanheads/mcp-ts-core) `^0.9.6`
+**Version:** 0.6.15
+**Framework:** [@cyanheads/mcp-ts-core](https://www.npmjs.com/package/@cyanheads/mcp-ts-core) `^0.9.13`
 **Engines:** Bun ≥1.3.0, Node ≥24.0.0
 
 > **Read the framework docs first:** `node_modules/@cyanheads/mcp-ts-core/CLAUDE.md` contains the full API reference — builders, Context, error codes, exports, patterns. This file covers server-specific conventions only.
@@ -26,6 +26,7 @@
 | Tool | `openalex_search_entities` | Search, filter, sort, or retrieve by ID |
 | Tool | `openalex_analyze_trends` | Group-by aggregation for trends/distributions |
 | Tool | `openalex_resolve_name` | Name-to-ID resolution via autocomplete |
+| Tool | `openalex_get_citation_graph` | One-hop citation graph traversal (cites/cited_by/related_to) |
 | Prompt | `openalex_literature_review` | Guided systematic literature search workflow |
 | Prompt | `openalex_research_landscape` | Quantitative research landscape analysis |
 
@@ -66,6 +67,7 @@ Tailor suggestions to what's actually missing or stale — don't recite the full
 - **Use `ctx.state`** for tenant-scoped storage. Never access persistence directly.
 - **Check `ctx.elicit` / `ctx.sample`** for presence before calling.
 - **Secrets in env vars only** — never hardcoded.
+- **Close the loop on issues.** When implementing work tracked by a GitHub issue, comment on the issue with what landed and close it. Do both — a comment without a close leaves stale issues open; a close without a comment leaves no record of what shipped. The comment is for future readers — state the concrete changes, not the conversation that produced them.
 
 ---
 
@@ -164,7 +166,7 @@ Handlers throw — the framework catches, classifies, and formats.
 import { JsonRpcErrorCode } from '@cyanheads/mcp-ts-core/errors';
 
 errors: [
-  { reason: 'semantic_per_page_cap', code: JsonRpcErrorCode.InvalidParams,
+  { reason: 'semantic_per_page_cap', code: JsonRpcErrorCode.ValidationError,
     when: 'per_page exceeds the semantic-search cap',
     recovery: 'Reduce per_page to 50 or less, or switch search_mode to keyword.' },
 ],
@@ -206,6 +208,7 @@ src/
       search-entities.tool.ts           # openalex_search_entities
       analyze-trends.tool.ts            # openalex_analyze_trends
       resolve-name.tool.ts              # openalex_resolve_name
+      citation-graph.tool.ts            # openalex_get_citation_graph
     prompts/definitions/
       literature-review.prompt.ts       # openalex_literature_review
       research-landscape.prompt.ts      # openalex_research_landscape
@@ -243,25 +246,27 @@ Available skills:
 | `add-service` | Scaffold a new service integration |
 | `add-test` | Scaffold test file for a tool, resource, or service |
 | `field-test` | Exercise tools/resources/prompts with real inputs, verify behavior, report issues |
-| `security-pass` | Audit handlers for MCP-specific security gaps: output injection, scope blast radius, input sinks, tenant isolation |
 | `tool-defs-analysis` | Read-only audit of LLM-facing definition language (voice, leaks, recovery, sparsity, structure) across tools/resources/prompts |
+| `security-pass` | Audit handlers for MCP-specific security gaps: output injection, scope blast radius, input sinks, tenant isolation |
+| `code-simplifier` | Post-session cleanup against `git diff` — modernize syntax, consolidate duplication, align with the codebase |
 | `devcheck` | Lint, format, typecheck, audit |
 | `polish-docs-meta` | Finalize docs, README, metadata, and agent protocol for shipping |
+| `git-wrapup` | Land working-tree changes as a versioned commit + annotated tag — version bump, changelog, verify, tag. Local only. |
+| `release-and-publish` | Push + npm + MCP Registry + GH Release + Docker. Picks up from `git-wrapup` |
 | `maintenance` | Investigate changelogs, adopt upstream changes, sync skills |
 | `report-issue-framework` | File a bug or feature request against `@cyanheads/mcp-ts-core` |
 | `report-issue-local` | File a bug or feature request against this server's own repo |
 | `api-auth` | Auth modes, scopes, JWT/OAuth |
-| `api-canvas` | DataCanvas primitive — register tabular data, run SQL, export, `spillover()` helper. Tier 3 opt-in (DuckDB) |
+| `api-canvas` | DataCanvas: register tabular data, run SQL, export, plus the `spillover()` helper — Tier 3 opt-in |
 | `api-config` | AppConfig, parseConfig, env vars |
 | `api-context` | Context interface, logger, state, progress |
 | `api-errors` | McpError, JsonRpcErrorCode, error patterns |
+| `api-linter` | Definition linter rule catalog — invoked by `bun run lint:mcp` and `devcheck` |
 | `api-services` | LLM, Speech, Graph services |
 | `api-testing` | createMockContext, test patterns |
-| `api-utils` | Formatting, parsing, security, pagination, scheduling |
+| `api-utils` | Formatting, parsing, security, pagination, scheduling, telemetry helpers |
 | `api-telemetry` | OTel catalog: spans, metrics, completion logs, env config, cardinality rules |
 | `api-workers` | Cloudflare Workers runtime |
-| `api-linter` | MCP definition lint rules reference (rule IDs, severities, fixes) |
-| `release-and-publish` | End-to-end ship workflow (npm + MCP Registry + GHCR) |
 
 When you complete a skill's checklist, check the boxes and add a completion timestamp at the end (e.g., `Completed: 2026-03-11`).
 
@@ -344,4 +349,7 @@ import { getOpenAlexService } from '@/services/openalex/openalex-service.js';
 - [ ] OpenAlex wrapping: tests include at least one sparse payload case with omitted upstream fields
 - [ ] Registered in `createApp()` arrays (directly or via barrel exports)
 - [ ] Tests use `createMockContext()` from `@cyanheads/mcp-ts-core/testing`
+- [ ] `.codex-plugin/plugin.json` populated — `name`, `version`, `description`, `repository`, `license` from `package.json`; `interface.displayName` = package name; `interface.shortDescription` from `package.json` description
+- [ ] `.codex-plugin/mcp.json` updated — server name key matches `package.json` name; env vars added for any required API keys
+- [ ] `.claude-plugin/plugin.json` populated — `name`, `version`, `description`, `repository`, `license` from `package.json`; inline `mcpServers` entry with server name key, env vars for any required API keys
 - [ ] `bun run devcheck` passes

package/README.md

@@ -7,13 +7,13 @@
 
 <div align="center">
 
-[![Version](https://img.shields.io/badge/Version-0.6.13-blue.svg?style=flat-square)](./CHANGELOG.md) [![License](https://img.shields.io/badge/License-Apache%202.0-orange.svg?style=flat-square)](./LICENSE) [![Docker](https://img.shields.io/badge/Docker-ghcr.io-2496ED?style=flat-square&logo=docker&logoColor=white)](https://github.com/users/cyanheads/packages/container/package/openalex-mcp-server) [![MCP SDK](https://img.shields.io/badge/MCP%20SDK-^1.29.0-green.svg?style=flat-square)](https://modelcontextprotocol.io/) [![npm](https://img.shields.io/npm/v/@cyanheads/openalex-mcp-server?style=flat-square&logo=npm&logoColor=white)](https://www.npmjs.com/package/@cyanheads/openalex-mcp-server) [![TypeScript](https://img.shields.io/badge/TypeScript-^6.0.3-3178C6.svg?style=flat-square)](https://www.typescriptlang.org/) [![Bun](https://img.shields.io/badge/Bun-v1.3.0-blueviolet.svg?style=flat-square)](https://bun.sh/)
+[![Version](https://img.shields.io/badge/Version-0.6.15-blue.svg?style=flat-square)](./CHANGELOG.md) [![License](https://img.shields.io/badge/License-Apache%202.0-orange.svg?style=flat-square)](./LICENSE) [![Docker](https://img.shields.io/badge/Docker-ghcr.io-2496ED?style=flat-square&logo=docker&logoColor=white)](https://github.com/users/cyanheads/packages/container/package/openalex-mcp-server) [![MCP SDK](https://img.shields.io/badge/MCP%20SDK-^1.29.0-green.svg?style=flat-square)](https://modelcontextprotocol.io/) [![npm](https://img.shields.io/npm/v/@cyanheads/openalex-mcp-server?style=flat-square&logo=npm&logoColor=white)](https://www.npmjs.com/package/@cyanheads/openalex-mcp-server) [![TypeScript](https://img.shields.io/badge/TypeScript-^6.0.3-3178C6.svg?style=flat-square)](https://www.typescriptlang.org/) [![Bun](https://img.shields.io/badge/Bun-v1.3.0-blueviolet.svg?style=flat-square)](https://bun.sh/)
 
 </div>
 
 <div align="center">
 
-[![Install in Claude Desktop](https://img.shields.io/badge/Install_in-Claude_Desktop-D97757?style=for-the-badge&logo=anthropic&logoColor=white)](https://github.com/cyanheads/openalex-mcp-server/releases/latest/download/openalex-mcp-server.mcpb) [![Install in Cursor](https://cursor.com/deeplink/mcp-install-dark.svg)](https://cursor.com/en/install-mcp?name=openalex-mcp-server&config=eyJtY3BTZXJ2ZXJzIjp7Im9wZW5hbGV4LW1jcC1zZXJ2ZXIiOnsiY29tbWFuZCI6Im5weCIsImFyZ3MiOlsiLXkiLCJAY3lhbmhlYWRzL29wZW5hbGV4LW1jcC1zZXJ2ZXJAbGF0ZXN0Il0sImVudiI6eyJNQ1BfVFJBTlNQT1JUX1RZUEUiOiJzdGRpbyIsIk1DUF9MT0dfTEVWRUwiOiJpbmZvIn19fX0=) [![Install in VS Code](https://img.shields.io/badge/VS_Code-Install_Server-0098FF?style=for-the-badge&logo=visualstudiocode&logoColor=white)](https://vscode.dev/redirect?url=vscode:mcp/install?%7B%22name%22%3A%22openalex-mcp-server%22%2C%22command%22%3A%22npx%22%2C%22args%22%3A%5B%22-y%22%2C%22%40cyanheads%2Fopenalex-mcp-server%40latest%22%5D%2C%22env%22%3A%7B%22MCP_TRANSPORT_TYPE%22%3A%22stdio%22%2C%22MCP_LOG_LEVEL%22%3A%22info%22%7D%7D)
+[![Install in Claude Desktop](https://img.shields.io/badge/Install_in-Claude_Desktop-D97757?style=for-the-badge&logo=anthropic&logoColor=white)](https://github.com/cyanheads/openalex-mcp-server/releases/latest/download/openalex-mcp-server.mcpb) [![Install in Cursor](https://cursor.com/deeplink/mcp-install-dark.svg)](https://cursor.com/en/install-mcp?name=openalex-mcp-server&config=eyJjb21tYW5kIjoibnB4IiwiYXJncyI6WyIteSIsIkBjeWFuaGVhZHMvb3BlbmFsZXgtbWNwLXNlcnZlciJdfQ==) [![Install in VS Code](https://img.shields.io/badge/VS_Code-Install_Server-0098FF?style=for-the-badge&logo=visualstudiocode&logoColor=white)](https://vscode.dev/redirect?url=vscode:mcp/install?%7B%22name%22%3A%22openalex-mcp-server%22%2C%22command%22%3A%22npx%22%2C%22args%22%3A%5B%22-y%22%2C%22%40cyanheads/openalex-mcp-server%22%5D%7D)
 
 [![Framework](https://img.shields.io/badge/Built%20on-@cyanheads/mcp--ts--core-67E8F9?style=flat-square)](https://www.npmjs.com/package/@cyanheads/mcp-ts-core)
 

package/dist/index.js

@@ -17,6 +17,7 @@ await createApp({
     instructions: 'Use the openalex_* tools to query the OpenAlex scholarly catalog (works, authors, sources, institutions, topics, keywords, publishers, funders): resolve names to IDs, search/filter/sort or fetch by ID, and group_by for trends. Names are ambiguous and IDs are not — call openalex_resolve_name before filtering by entity.',
     landing: {
         tagline: 'Search the OpenAlex catalog — 270M+ works, 90M+ authors, 100K+ sources.',
+        requireAuth: false,
         repoRoot: 'https://github.com/cyanheads/openalex-mcp-server',
         envExample: {
             OPENALEX_API_KEY: 'your-openalex-api-key',

package/dist/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";AACA;;;GAGG;AAEH,OAAO,EAAE,SAAS,EAAE,MAAM,wBAAwB,CAAC;AACnD,OAAO,EAAE,sBAAsB,EAAE,MAAM,8DAA8D,CAAC;AACtG,OAAO,EAAE,uBAAuB,EAAE,MAAM,+DAA+D,CAAC;AACxG,OAAO,EAAE,iBAAiB,EAAE,MAAM,uDAAuD,CAAC;AAC1F,OAAO,EAAE,oBAAoB,EAAE,MAAM,uDAAuD,CAAC;AAC7F,OAAO,EAAE,eAAe,EAAE,MAAM,qDAAqD,CAAC;AACtF,OAAO,EAAE,kBAAkB,EAAE,MAAM,wDAAwD,CAAC;AAC5F,OAAO,EAAE,mBAAmB,EAAE,MAAM,yCAAyC,CAAC;AAE9E,MAAM,SAAS,CAAC;IACd,KAAK,EAAE,CAAC,eAAe,EAAE,kBAAkB,EAAE,iBAAiB,EAAE,oBAAoB,CAAC;IACrF,OAAO,EAAE,CAAC,sBAAsB,EAAE,uBAAuB,CAAC;IAC1D,YAAY,EACV,iUAAiU;IACnU,OAAO,EAAE;QACP,OAAO,EAAE,yEAAyE;QAClF,WAAW,EAAE,KAAK;QAClB,QAAQ,EAAE,kDAAkD;QAC5D,UAAU,EAAE;YACV,gBAAgB,EAAE,uBAAuB;SAC1C;QACD,KAAK,EAAE;YACL,EAAE,KAAK,EAAE,UAAU,EAAE,IAAI,EAAE,sBAAsB,EAAE;YACnD,EAAE,KAAK,EAAE,UAAU,EAAE,IAAI,EAAE,2BAA2B,EAAE;SACzD;KACF;IACD,KAAK;QACH,mBAAmB,EAAE,CAAC;IACxB,CAAC;CACF,CAAC,CAAC"}

package/dist/mcp-server/prompts/definitions/literature-review.prompt.d.ts

@@ -5,7 +5,7 @@
 import { z } from '@cyanheads/mcp-ts-core';
 export declare const literatureReviewPrompt: import("@cyanheads/mcp-ts-core").PromptDefinition<z.ZodObject<{
     topic: z.ZodString;
-    scope: z.ZodDefault<z.ZodEnum<{
+    scope: z.ZodOptional<z.ZodEnum<{
         narrow: "narrow";
         broad: "broad";
     }>>;

package/dist/mcp-server/prompts/definitions/literature-review.prompt.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"literature-review.prompt.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/prompts/definitions/literature-review.prompt.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAU,CAAC,EAAE,MAAM,wBAAwB,CAAC;AAEnD,eAAO,MAAM,sBAAsB;;;;;;kBAuDjC,CAAC"}
+{"version":3,"file":"literature-review.prompt.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/prompts/definitions/literature-review.prompt.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAU,CAAC,EAAE,MAAM,wBAAwB,CAAC;AAEnD,eAAO,MAAM,sBAAsB;;;;;;kBA4DjC,CAAC"}

package/dist/mcp-server/prompts/definitions/literature-review.prompt.js

@@ -12,28 +12,30 @@ export const literatureReviewPrompt = prompt('openalex_literature_review', {
             .describe('Research topic or question to review (e.g., "CRISPR off-target effects in human cell lines").'),
         scope: z
             .enum(['narrow', 'broad'])
-            .default('narrow')
-            .describe('"narrow": focused on specific question. "broad": survey of the field.'),
+            .optional()
+            .describe('"narrow": focused on specific question. "broad": survey of the field. Defaults to "narrow" if omitted.'),
     }),
-    generate: (args) => [
-        {
-            role: 'user',
-            content: {
-                type: 'text',
-                text: `Conduct a systematic literature review on: "${args.topic}"
+    generate: (args) => {
+        const scope = args.scope ?? 'narrow';
+        return [
+            {
+                role: 'user',
+                content: {
+                    type: 'text',
+                    text: `Conduct a systematic literature review on: "${args.topic}"
 
-Scope: ${args.scope}
+Scope: ${scope}
 
 Follow this workflow using the OpenAlex tools:
 
 1. **Resolve entities** — Use openalex_resolve_name to identify key authors, institutions, or topics related to "${args.topic}". Collect their OpenAlex IDs.
 
-2. **Search literature** — Use openalex_search_entities to find relevant works.${args.scope === 'narrow'
-                    ? `
+2. **Search literature** — Use openalex_search_entities to find relevant works.${scope === 'narrow'
+                        ? `
    - Use exact search mode with specific phrases
    - Filter tightly by resolved topic IDs
    - Focus on a single topic cluster`
-                    : `
+                        : `
    - Try keyword search for the topic
    - Use semantic search for conceptually related work across subfields
    - Search with multiple related topic IDs to capture adjacent areas`}
@@ -41,7 +43,7 @@ Follow this workflow using the OpenAlex tools:
 
 3. **Identify key papers** — Sort by cited_by_count to find landmark works. Use openalex_search_entities with id to get full details on the most important ones.
 
-4. **Trace citations** — For key papers, search with the cited_by filter to find subsequent work, and the cites filter to find foundational work.
+4. **Trace citations** — For each key paper, use openalex_get_citation_graph with direction "cites" to find subsequent work that cites it, and direction "cited_by" to find foundational work it references.
 
 5. **Analyze the landscape** — Use openalex_analyze_trends to understand:
    - Publication volume over time (group_by: publication_year)
@@ -49,8 +51,9 @@ Follow this workflow using the OpenAlex tools:
    - Open access availability (group_by: oa_status)
 
 6. **Synthesize** — Summarize findings: key themes, seminal papers, active research fronts, gaps in the literature, and methodological trends.`,
+                },
             },
-        },
-    ],
+        ];
+    },
 });
 //# sourceMappingURL=literature-review.prompt.js.map

package/dist/mcp-server/prompts/definitions/literature-review.prompt.js.map

@@ -1 +1 @@
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+{"version":3,"file":"literature-review.prompt.js","sourceRoot":"","sources":["../../../../src/mcp-server/prompts/definitions/literature-review.prompt.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,wBAAwB,CAAC;AAEnD,MAAM,CAAC,MAAM,sBAAsB,GAAG,MAAM,CAAC,4BAA4B,EAAE;IACzE,WAAW,EACT,wHAAwH;IAC1H,SAAS,EACP,2HAA2H;IAC7H,IAAI,EAAE,CAAC,CAAC,MAAM,CAAC;QACb,KAAK,EAAE,CAAC;aACL,MAAM,EAAE;aACR,QAAQ,CACP,+FAA+F,CAChG;QACH,KAAK,EAAE,CAAC;aACL,IAAI,CAAC,CAAC,QAAQ,EAAE,OAAO,CAAC,CAAC;aACzB,QAAQ,EAAE;aACV,QAAQ,CACP,wGAAwG,CACzG;KACJ,CAAC;IACF,QAAQ,EAAE,CAAC,IAAI,EAAE,EAAE;QACjB,MAAM,KAAK,GAAG,IAAI,CAAC,KAAK,IAAI,QAAQ,CAAC;QACrC,OAAO;YACL;gBACE,IAAI,EAAE,MAAM;gBACZ,OAAO,EAAE;oBACP,IAAI,EAAE,MAAM;oBACZ,IAAI,EAAE,+CAA+C,IAAI,CAAC,KAAK;;SAEhE,KAAK;;;;mHAIqG,IAAI,CAAC,KAAK;;iFAGjH,KAAK,KAAK,QAAQ;wBAChB,CAAC,CAAC;;;qCAGqB;wBACvB,CAAC,CAAC;;;sEAIN;;;;;;;;;;;;+IAYqI;iBACtI;aACF;SACF,CAAC;IACJ,CAAC;CACF,CAAC,CAAC"}

package/dist/mcp-server/tools/definitions/analyze-trends.tool.d.ts

@@ -50,7 +50,7 @@ export declare const analyzeTrendsTool: import("@cyanheads/mcp-ts-core").ToolDef
     readonly recovery: "Confirm the API key has access to this entity type or endpoint, then retry the request.";
 }, {
     readonly reason: "upstream_invalid_params";
-    readonly code: JsonRpcErrorCode.InvalidParams;
+    readonly code: JsonRpcErrorCode.ValidationError;
     readonly when: "OpenAlex rejected the group_by or filter as malformed (HTTP 400).";
     readonly recovery: "OpenAlex rejected a token in group_by or filters. The upstream message names the rejected key and lists valid alternatives — read it, then retry with a valid filter key (e.g. abstract.search, title.search, default.search for full-text inside filters) or a valid group_by field for the entity_type.";
 }, {

package/dist/mcp-server/tools/definitions/analyze-trends.tool.js

@@ -32,7 +32,7 @@ export const analyzeTrendsTool = tool('openalex_analyze_trends', {
         },
         {
             reason: 'upstream_invalid_params',
-            code: JsonRpcErrorCode.InvalidParams,
+            code: JsonRpcErrorCode.ValidationError,
             when: 'OpenAlex rejected the group_by or filter as malformed (HTTP 400).',
             recovery: 'OpenAlex rejected a token in group_by or filters. The upstream message names the rejected key and lists valid alternatives — read it, then retry with a valid filter key (e.g. abstract.search, title.search, default.search for full-text inside filters) or a valid group_by field for the entity_type.',
         },

package/dist/mcp-server/tools/definitions/analyze-trends.tool.js.map

@@ -1 +1 @@
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+{"version":3,"file":"analyze-trends.tool.js","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/analyze-trends.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,IAAI,EAAE,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AACjE,OAAO,EAAE,kBAAkB,EAAE,MAAM,yCAAyC,CAAC;AAC7E,OAAO,EAAE,YAAY,EAAE,MAAM,8BAA8B,CAAC;AAE5D,MAAM,CAAC,MAAM,iBAAiB,GAAG,IAAI,CAAC,yBAAyB,EAAE;IAC/D,WAAW,EACT,oXAAoX;IACtX,SAAS,EACP,oHAAoH;IACtH,WAAW,EAAE,EAAE,YAAY,EAAE,IAAI,EAAE,cAAc,EAAE,IAAI,EAAE,aAAa,EAAE,IAAI,EAAE;IAC9E,MAAM,EAAE;QACN;YACE,MAAM,EAAE,cAAc;YACtB,IAAI,EAAE,gBAAgB,CAAC,WAAW;YAClC,IAAI,EAAE,4CAA4C;YAClD,SAAS,EAAE,IAAI;YACf,QAAQ,EACN,sFAAsF;SACzF;QACD;YACE,MAAM,EAAE,uBAAuB;YAC/B,IAAI,EAAE,gBAAgB,CAAC,YAAY;YACnC,IAAI,EAAE,2CAA2C;YACjD,QAAQ,EACN,0FAA0F;SAC7F;QACD;YACE,MAAM,EAAE,oBAAoB;YAC5B,IAAI,EAAE,gBAAgB,CAAC,SAAS;YAChC,IAAI,EAAE,8DAA8D;YACpE,QAAQ,EACN,yFAAyF;SAC5F;QACD;YACE,MAAM,EAAE,yBAAyB;YACjC,IAAI,EAAE,gBAAgB,CAAC,eAAe;YACtC,IAAI,EAAE,mEAAmE;YACzE,QAAQ,EACN,2SAA2S;SAC9S;QACD;YACE,MAAM,EAAE,4BAA4B;YACpC,IAAI,EAAE,gBAAgB,CAAC,eAAe;YACtC,IAAI,EAAE,mEAAmE;YACzE,QAAQ,EACN,kGAAkG;SACrG;KACF;IACD,KAAK,EAAE,CAAC,CAAC,MAAM,CAAC;QACd,WAAW,EAAE,CAAC,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC,QAAQ,CAAC,2BAA2B,CAAC;QACvE,QAAQ,EAAE,CAAC;aACR,MAAM,EAAE;aACR,QAAQ,CACP,uUAAuU,CACxU;QACH,OAAO,EAAE,CAAC;aACP,MAAM,CAAC,CAAC,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC;aAC9B,QAAQ,EAAE;aACV,QAAQ,CACP,qSAAqS,CACtS;QACH,eAAe,EAAE,CAAC;aACf,OAAO,EAAE;aACT,OAAO,CAAC,KAAK,CAAC;aACd,QAAQ,CACP,sFAAsF,CACvF;QACH,QAAQ,EAAE,CAAC;aACR,MAAM,EAAE;aACR,GAAG,EAAE;aACL,GAAG,CAAC,CAAC,CAAC;aACN,GAAG,CAAC,GAAG,CAAC;aACR,OAAO,CAAC,GAAG,CAAC;aACZ,QAAQ,CACP,8LAA8L,CAC/L;QACH,MAAM,EAAE,CAAC;aACN,MAAM,EAAE;aACR,QAAQ,EAAE;aACV,QAAQ,CACP,wOAAwO,CACzO;KACJ,CAAC;IACF,MAAM,EAAE,CAAC,CAAC,MAAM,CAAC;QACf,IAAI,EAAE,CAAC;aACJ,MAAM,CAAC;YACN,KAAK,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,wDAAwD,CAAC;YACpF,YAAY,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,EAAE,CAAC,QAAQ,CAAC,0CAA0C,CAAC;YACxF,WAAW,EAAE,CAAC;iBACX,MAAM,EAAE;iBACR,QAAQ,EAAE;iBACV,QAAQ,CAAC,yDAAyD,CAAC;YACtE,IAAI,EAAE,CAAC;iBACJ,MAAM,EAAE;iBACR,QAAQ,CACP,sJAAsJ,CACvJ;SACJ,CAAC;aACD,QAAQ,CAAC,uBAAuB,CAAC;QACpC,MAAM,EAAE,CAAC;aACN,KAAK,CACJ,CAAC;aACE,MAAM,CAAC;YACN,GAAG,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,uCAAuC,CAAC;YACjE,gBAAgB,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,6BAA6B,CAAC;YACpE,KAAK,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,mCAAmC,CAAC;SAChE,CAAC;aACD,QAAQ,CAAC,2EAA2E,CAAC,CACzF;aACA,QAAQ,CAAC,iCAAiC,CAAC;KAC/C,CAAC;IAEF,KAAK,CAAC,OAAO,CAAC,KAAK,EAAE,GAAG;QACtB,MAAM,OAAO,GAAG,kBAAkB,EAAE,CAAC;QACrC,MAAM,MAAM,GAAG,MAAM,OAAO,CAAC,OAAO,CAClC;YACE,UAAU,EAAE,KAAK,CAAC,WAAW;YAC7B,OAAO,EAAE,KAAK,CAAC,QAAQ;YACvB,OAAO,EAAE,KAAK,CAAC,OAAO;YACtB,cAAc,EAAE,KAAK,CAAC,eAAe;YACrC,OAAO,EAAE,KAAK,CAAC,QAAQ;YACvB,MAAM,EAAE,KAAK,CAAC,MAAM;SACrB,EACD,GAAG,CACJ,CAAC;QAEF,GAAG,CAAC,GAAG,CAAC,IAAI,CAAC,0BAA0B,EAAE;YACvC,UAAU,EAAE,KAAK,CAAC,WAAW;YAC7B,OAAO,EAAE,KAAK,CAAC,QAAQ;YACvB,UAAU,EAAE,MAAM,CAAC,IAAI,CAAC,KAAK;YAC7B,UAAU,EAAE,MAAM,CAAC,MAAM,CAAC,MAAM;SACjC,CAAC,CAAC;QAEH,OAAO;YACL,IAAI,EAAE,EAAE,GAAG,MAAM,CAAC,IAAI,EAAE,IAAI,EAAE,gBAAgB,CAAC,KAAK,CAAC,EAAE;YACvD,MAAM,EAAE,MAAM,CAAC,MAAM;SACtB,CAAC;IACJ,CAAC;IAED,MAAM,EAAE,CAAC,MAAM,EAAE,EAAE;QACjB,MAAM,OAAO,GAAG,GAAG,MAAM,CAAC,IAAI,CAAC,KAAK,0BAA0B,MAAM,CAAC,IAAI,CAAC,YAAY,IAAI,MAAM,CAAC,MAAM,CAAC,MAAM,yBAAyB,MAAM,CAAC,IAAI,CAAC,IAAI,GAAG,CAAC;QAE3J,IAAI,MAAM,CAAC,MAAM,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YAC/B,OAAO;gBACL;oBACE,IAAI,EAAE,MAAM;oBACZ,IAAI,EAAE,uBAAuB,MAAM,CAAC,IAAI,CAAC,IAAI,YAAY,MAAM,CAAC,IAAI,CAAC,KAAK,kBAAkB,MAAM,CAAC,IAAI,CAAC,YAAY,IAAI,CAAC,6DAA6D;iBACvL;aACF,CAAC;QACJ,CAAC;QAED,uFAAuF;QACvF,yEAAyE;QACzE,sEAAsE;QACtE,MAAM,WAAW,GAAG,oBAAoB,CAAC,MAAM,CAAC,MAAM,CAAC;YACrD,CAAC,CAAC,CAAC,GAAG,MAAM,CAAC,MAAM,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,GAAG,CAAC,aAAa,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC;YAC/D,CAAC,CAAC,MAAM,CAAC,MAAM,CAAC;QAElB,MAAM,KAAK,GAAG,WAAW,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE;YAClC,MAAM,KAAK,GACT,CAAC,CAAC,GAAG,KAAK,CAAC,CAAC,gBAAgB,CAAC,CAAC,CAAC,CAAC,CAAC,gBAAgB,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,gBAAgB,KAAK,CAAC,CAAC,GAAG,GAAG,CAAC;YACzF,OAAO,GAAG,KAAK,KAAK,CAAC,CAAC,KAAK,EAAE,CAAC;QAChC,CAAC,CAAC,CAAC;QACH,MAAM,MAAM,GAAG,MAAM,CAAC,IAAI,CAAC,WAAW;YACpC,CAAC,CAAC,+CAA+C,MAAM,CAAC,IAAI,CAAC,WAAW,KAAK;YAC7E,CAAC,CAAC,EAAE,CAAC;QACP,OAAO;YACL;gBACE,IAAI,EAAE,MAAM;gBACZ,IAAI,EAAE,GAAG,OAAO,QAAQ,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,GAAG,MAAM,EAAE;aACpD;SACF,CAAC;IACJ,CAAC;CACF,CAAC,CAAC;AAEH,MAAM,oBAAoB,GAAG,wBAAwB,CAAC;AAEtD,SAAS,oBAAoB,CAAC,MAAsC;IAClE,OAAO,MAAM,CAAC,MAAM,GAAG,CAAC,IAAI,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,oBAAoB,CAAC,IAAI,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;AACpF,CAAC;AAED,SAAS,gBAAgB,CAAC,KAKzB;IACC,MAAM,KAAK,GAAG,CAAC,eAAe,KAAK,CAAC,WAAW,EAAE,EAAE,YAAY,KAAK,CAAC,QAAQ,EAAE,CAAC,CAAC;IACjF,IAAI,KAAK,CAAC,OAAO,IAAI,MAAM,CAAC,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QAC3D,KAAK,CAAC,IAAI,CAAC,WAAW,IAAI,CAAC,SAAS,CAAC,KAAK,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;IACzD,CAAC;IACD,I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package/dist/mcp-server/tools/definitions/citation-graph.tool.d.ts

@@ -45,12 +45,12 @@ export declare const getCitationGraphTool: import("@cyanheads/mcp-ts-core").Tool
     readonly recovery: "Confirm the API key has access to this entity type or endpoint, then retry the request.";
 }, {
     readonly reason: "upstream_invalid_params";
-    readonly code: JsonRpcErrorCode.InvalidParams;
+    readonly code: JsonRpcErrorCode.ValidationError;
     readonly when: "OpenAlex rejected the seed_id, filter, or sort as malformed (HTTP 400).";
     readonly recovery: "Read the upstream message for the rejected token, then retry with a valid OpenAlex work ID (W…), DOI, or PMID for seed_id, or correct the filter/sort field name it names.";
 }, {
     readonly reason: "reserved_filter_key";
-    readonly code: JsonRpcErrorCode.InvalidParams;
+    readonly code: JsonRpcErrorCode.ValidationError;
     readonly when: "filters contains cites/cited_by/related_to — the direction parameter reserves those keys.";
     readonly recovery: "Remove the reserved key from filters, or restate the relationship through direction.";
 }, {

package/dist/mcp-server/tools/definitions/citation-graph.tool.js

@@ -60,13 +60,13 @@ export const getCitationGraphTool = tool('openalex_get_citation_graph', {
         },
         {
             reason: 'upstream_invalid_params',
-            code: JsonRpcErrorCode.InvalidParams,
+            code: JsonRpcErrorCode.ValidationError,
             when: 'OpenAlex rejected the seed_id, filter, or sort as malformed (HTTP 400).',
             recovery: 'Read the upstream message for the rejected token, then retry with a valid OpenAlex work ID (W…), DOI, or PMID for seed_id, or correct the filter/sort field name it names.',
         },
         {
             reason: 'reserved_filter_key',
-            code: JsonRpcErrorCode.InvalidParams,
+            code: JsonRpcErrorCode.ValidationError,
             when: 'filters contains cites/cited_by/related_to — the direction parameter reserves those keys.',
             recovery: 'Remove the reserved key from filters, or restate the relationship through direction.',
         },

package/dist/mcp-server/tools/definitions/citation-graph.tool.js.map

@@ -1 +1 @@
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package/dist/mcp-server/tools/definitions/resolve-name.tool.d.ts

@@ -45,7 +45,7 @@ export declare const resolveNameTool: import("@cyanheads/mcp-ts-core").ToolDefin
     readonly recovery: "Confirm the API key has access to autocomplete, then retry the request.";
 }, {
     readonly reason: "upstream_invalid_params";
-    readonly code: JsonRpcErrorCode.InvalidParams;
+    readonly code: JsonRpcErrorCode.ValidationError;
     readonly when: "OpenAlex rejected the autocomplete query as malformed (HTTP 400).";
     readonly recovery: "Trim the query, check filter syntax, and ensure the entity_type is a supported value.";
 }, {

package/dist/mcp-server/tools/definitions/resolve-name.tool.js

@@ -32,7 +32,7 @@ export const resolveNameTool = tool('openalex_resolve_name', {
         },
         {
             reason: 'upstream_invalid_params',
-            code: JsonRpcErrorCode.InvalidParams,
+            code: JsonRpcErrorCode.ValidationError,
             when: 'OpenAlex rejected the autocomplete query as malformed (HTTP 400).',
             recovery: 'Trim the query, check filter syntax, and ensure the entity_type is a supported value.',
         },

package/dist/mcp-server/tools/definitions/resolve-name.tool.js.map

@@ -1 +1 @@
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+{"version":3,"file":"resolve-name.tool.js","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/resolve-name.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,IAAI,EAAE,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AACjE,OAAO,EAAE,kBAAkB,EAAE,MAAM,yCAAyC,CAAC;AAC7E,OAAO,EAAE,YAAY,EAAE,MAAM,8BAA8B,CAAC;AAE5D,MAAM,CAAC,MAAM,eAAe,GAAG,IAAI,CAAC,uBAAuB,EAAE;IAC3D,WAAW,EACT,mOAAmO;IACrO,SAAS,EACP,kHAAkH;IACpH,WAAW,EAAE,EAAE,YAAY,EAAE,IAAI,EAAE,cAAc,EAAE,IAAI,EAAE,aAAa,EAAE,IAAI,EAAE;IAC9E,MAAM,EAAE;QACN;YACE,MAAM,EAAE,cAAc;YACtB,IAAI,EAAE,gBAAgB,CAAC,WAAW;YAClC,IAAI,EAAE,yDAAyD;YAC/D,SAAS,EAAE,IAAI;YACf,QAAQ,EACN,sFAAsF;SACzF;QACD;YACE,MAAM,EAAE,uBAAuB;YAC/B,IAAI,EAAE,gBAAgB,CAAC,YAAY;YACnC,IAAI,EAAE,2CAA2C;YACjD,QAAQ,EACN,0FAA0F;SAC7F;QACD;YACE,MAAM,EAAE,oBAAoB;YAC5B,IAAI,EAAE,gBAAgB,CAAC,SAAS;YAChC,IAAI,EAAE,oDAAoD;YAC1D,QAAQ,EAAE,yEAAyE;SACpF;QACD;YACE,MAAM,EAAE,yBAAyB;YACjC,IAAI,EAAE,gBAAgB,CAAC,eAAe;YACtC,IAAI,EAAE,mEAAmE;YACzE,QAAQ,EACN,uFAAuF;SAC1F;QACD;YACE,MAAM,EAAE,4BAA4B;YACpC,IAAI,EAAE,gBAAgB,CAAC,eAAe;YACtC,IAAI,EAAE,gFAAgF;YACtF,QAAQ,EACN,kGAAkG;SACrG;KACF;IACD,KAAK,EAAE,CAAC,CAAC,MAAM,CAAC;QACd,WAAW,EAAE,CAAC;aACX,IAAI,CAAC,YAAY,CAAC;aAClB,QAAQ,EAAE;aACV,QAAQ,CACP,2FAA2F,CAC5F;QACH,KAAK,EAAE,CAAC;aACL,MAAM,EAAE;aACR,GAAG,CAAC,CAAC,CAAC;aACN,QAAQ,CAAC,sEAAsE,CAAC;QACnF,OAAO,EAAE,CAAC;aACP,MAAM,CAAC,CAAC,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC;aAC9B,QAAQ,EAAE;aACV,QAAQ,CACP,8GAA8G,CAC/G;KACJ,CAAC;IACF,MAAM,EAAE,CAAC,CAAC,MAAM,CAAC;QACf,OAAO,EAAE,CAAC;aACP,KAAK,CACJ,CAAC;aACE,MAAM,CAAC;YACN,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,cAAc,CAAC;YACvC,WAAW,EAAE,CAAC;iBACX,MAAM,EAAE;iBACR,QAAQ,EAAE;iBACV,QAAQ,CAAC,gDAAgD,CAAC;YAC7D,YAAY,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,sBAAsB,CAAC;YACzD,WAAW,EAAE,CAAC;iBACX,MAAM,EAAE;iBACR,QAAQ,CACP,6FAA6F,CAC9F;YACH,cAAc,EAAE,CAAC;iBACd,MAAM,EAAE;iBACR,QAAQ,CAAC,0DAA0D,CAAC;YACvE,WAAW,EAAE,CAAC;iBACX,MAAM,EAAE;iBACR,QAAQ,EAAE;iBACV,QAAQ,CAAC,8CAA8C,CAAC;YAC3D,IAAI,EAAE,CAAC;iBACJ,MAAM,EAAE;iBACR,QAAQ,EAAE;iBACV,QAAQ,CACP,wHAAwH,CACzH;SACJ,CAAC;aACD,QAAQ,CACP,wGAAwG,CACzG,CACJ;aACA,QAAQ,CAAC,iCAAiC,CAAC;KAC/C,CAAC;IAEF,KAAK,CAAC,OAAO,CAAC,KAAK,EAAE,GAAG;QACtB,MAAM,OAAO,GAAG,kBAAkB,EAAE,CAAC;QACrC,MAAM,MAAM,GAAG,MAAM,OAAO,CAAC,YAAY,CACvC;YACE,UAAU,EAAE,KAAK,CAAC,WAAW;YAC7B,KAAK,EAAE,KAAK,CAAC,KAAK;YAClB,OAAO,EAAE,KAAK,CAAC,OAAO;SACvB,EACD,GAAG,CACJ,CAAC;QAEF,GAAG,CAAC,GAAG,CAAC,IAAI,CAAC,eAAe,EAAE;YAC5B,KAAK,EAAE,KAAK,CAAC,KAAK;YAClB,UAAU,EAAE,KAAK,CAAC,WAAW,IAAI,KAAK;YACtC,UAAU,EAAE,MAAM,CAAC,OAAO,CAAC,MAAM;SAClC,CAAC,CAAC;QAEH,OAAO,MAAM,CAAC;IAChB,CAAC;IAED,MAAM,EAAE,CAAC,MAAM,EAAE,EAAE;QACjB,IAAI,MAAM,CAAC,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YAChC,OAAO,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,mBAAmB,EAAE,CAAC,CAAC;QACvD,CAAC;QACD,MAAM,KAAK,GAAa,EAAE,CAAC;QAC3B,KAAK,MAAM,CAAC,IAAI,MAAM,CAAC,OAAO,EAAE,CAAC;YAC/B,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,YAAY,OAAO,CAAC,CAAC,WAAW,GAAG,CAAC,CAAC;YACvD,MAAM,OAAO,GAAa,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC;YACjC,IAAI,CAAC,CAAC,WAAW;gBAAE,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC;YAC/C,OAAO,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC,cAAc,YAAY,CAAC,CAAC;YAC9C,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,WAAW,KAAK,IAAI,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,WAAW,QAAQ,CAAC,CAAC;YAC9E,IAAI,CAAC,CAAC,IAAI;gBAAE,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC;YACjC,KAAK,CAAC,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC;YAChC,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QACjB,CAAC;QACD,OAAO,CAAC,EAAE,IAAI,EAAE,MAAM,EAAE,IAAI,EAAE,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,OAAO,EAAE,EAAE,CAAC,CAAC;IAC9D,CAAC;CACF,CAAC,CAAC"}

package/dist/mcp-server/tools/definitions/search-entities.tool.d.ts

@@ -78,7 +78,7 @@ export declare const searchEntitiesTool: import("@cyanheads/mcp-ts-core").ToolDe
     readonly recovery: "Confirm the API key has access to this entity type or endpoint, then retry the request.";
 }, {
     readonly reason: "upstream_invalid_params";
-    readonly code: JsonRpcErrorCode.InvalidParams;
+    readonly code: JsonRpcErrorCode.ValidationError;
     readonly when: "OpenAlex rejected the request as malformed (HTTP 400).";
     readonly recovery: "Read the upstream message for the rejected token, then retry after correcting the filter operator, sort field, or select field name it names.";
 }, {

package/dist/mcp-server/tools/definitions/search-entities.tool.js

@@ -79,7 +79,7 @@ export const searchEntitiesTool = tool('openalex_search_entities', {
         },
         {
             reason: 'upstream_invalid_params',
-            code: JsonRpcErrorCode.InvalidParams,
+            code: JsonRpcErrorCode.ValidationError,
             when: 'OpenAlex rejected the request as malformed (HTTP 400).',
             recovery: 'Read the upstream message for the rejected token, then retry after correcting the filter operator, sort field, or select field name it names.',
         },

package/dist/mcp-server/tools/definitions/search-entities.tool.js.map

@@ -1 +1 @@
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+{"version":3,"file":"search-entities.tool.js","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/search-entities.tool.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,IAAI,EAAE,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AACjE,OAAO,EAAE,kBAAkB,EAAE,MAAM,4CAA4C,CAAC;AAChF,OAAO,EAAE,kBAAkB,EAAE,MAAM,yCAAyC,CAAC;AAC7E,OAAO,EAAE,YAAY,EAAqB,MAAM,8BAA8B,CAAC;AAE/E,MAAM,qBAAqB,GAAG,EAAE,CAAC;AACjC,MAAM,UAAU,GAAG,GAAG,CAAC;AAEvB,SAAS,eAAe,CAAC,KASxB;IACC,MAAM,KAAK,GAAG,CAAC,eAAe,KAAK,CAAC,WAAW,EAAE,CAAC,CAAC;IACnD,IAAI,KAAK,CAAC,EAAE;QAAE,KAAK,CAAC,IAAI,CAAC,MAAM,KAAK,CAAC,EAAE,EAAE,CAAC,CAAC;IAC3C,IAAI,KAAK,CAAC,KAAK;QAAE,KAAK,CAAC,IAAI,CAAC,UAAU,KAAK,CAAC,KAAK,GAAG,CAAC,CAAC;IACtD,IAAI,KAAK,CAAC,WAAW,IAAI,KAAK,CAAC,WAAW,KAAK,SAAS,EAAE,CAAC;QACzD,KAAK,CAAC,IAAI,CAAC,eAAe,KAAK,CAAC,WAAW,EAAE,CAAC,CAAC;IACjD,CAAC;IACD,IAAI,KAAK,CAAC,OAAO,IAAI,MAAM,CAAC,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QAC3D,KAAK,CAAC,IAAI,CAAC,WAAW,IAAI,CAAC,SAAS,CAAC,KAAK,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC;IACzD,CAAC;IACD,IAAI,KAAK,CAAC,IAAI;QAAE,KAAK,CAAC,IAAI,CAAC,QAAQ,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC;IACjD,IAAI,KAAK,CAAC,MAAM,KAAK,SAAS;QAAE,KAAK,CAAC,IAAI,CAAC,UAAU,KAAK,CAAC,MAAM,EAAE,CAAC,CAAC;IACrE,IAAI,KAAK,CAAC,IAAI,KAAK,SAAS;QAAE,KAAK,CAAC,IAAI,CAAC,QAAQ,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC;IAC/D,OAAO,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;AAC3B,CAAC;AAED,MAAM,CAAC,MAAM,kBAAkB,GAAG,IAAI,CAAC,0BAA0B,EAAE;IACjE,WAAW,EACT,ggBAAggB;IAClgB,SAAS,EACP,qHAAqH;IACvH,WAAW,EAAE,EAAE,YAAY,EAAE,IAAI,EAAE,cAAc,EAAE,IAAI,EAAE,aAAa,EAAE,IAAI,EAAE;IAC9E,MAAM,EAAE;QACN;YACE,MAAM,EAAE,uBAAuB;YAC/B,IAAI,EAAE,gBAAgB,CAAC,eAAe;YACtC,IAAI,EAAE,+CAA+C,qBAAqB,GAAG;YAC7E,QAAQ,EAAE,sBAAsB,qBAAqB,6CAA6C;SACnG;QACD;YACE,MAAM,EAAE,oBAAoB;YAC5B,IAAI,EAAE,gBAAgB,CAAC,eAAe;YACtC,IAAI,EAAE,2CAA2C;YACjD,QAAQ,EAAE,0EAA0E;SACrF;QACD;YACE,MAAM,EAAE,qBAAqB;YAC7B,IAAI,EAAE,gBAAgB,CAAC,eAAe;YACtC,IAAI,EAAE,uCAAuC;YAC7C,QAAQ,EAAE,4DAA4D;SACvE;QACD;YACE,MAAM,EAAE,kBAAkB;YAC1B,IAAI,EAAE,gBAAgB,CAAC,QAAQ;YAC/B,IAAI,EAAE,0CAA0C;YAChD,QAAQ,EAAE,4EAA4E;SACvF;QACD;YACE,MAAM,EAAE,cAAc;YACtB,IAAI,EAAE,gBAAgB,CAAC,WAAW;YAClC,IAAI,EAAE,4CAA4C;YAClD,SAAS,EAAE,IAAI;YACf,QAAQ,EACN,sFAAsF;SACzF;QACD;YACE,MAAM,EAAE,uBAAuB;YAC/B,IAAI,EAAE,gBAAgB,CAAC,YAAY;YACnC,IAAI,EAAE,2CAA2C;YACjD,QAAQ,EACN,0FAA0F;SAC7F;QACD;YACE,MAAM,EAAE,oBAAoB;YAC5B,IAAI,EAAE,gBAAgB,CAAC,SAAS;YAChC,IAAI,EAAE,8DAA8D;YACpE,QAAQ,EACN,yFAAyF;SAC5F;QACD;YACE,MAAM,EAAE,yBAAyB;YACjC,IAAI,EAAE,gBAAgB,CAAC,eAAe;YACtC,IAAI,EAAE,wDAAwD;YAC9D,QAAQ,EACN,+IAA+I;SAClJ;QACD;YACE,MAAM,EAAE,4BAA4B;YACpC,IAAI,EAAE,gBAAgB,CAAC,eAAe;YACtC,IAAI,EAAE,mEAAmE;YACzE,QAAQ,EACN,kGAAkG;SACrG;KACF;IACD,KAAK,EAAE,CAAC,CAAC,MAAM,CAAC;QACd,WAAW,EAAE,CAAC,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC,QAAQ,CAAC,qCAAqC,CAAC;QACjF,EAAE,EAAE,CAAC;aACF,MAAM,EAAE;aACR,QAAQ,EAAE;aACV,QAAQ,CACP,qVAAqV,CACtV;QACH,KAAK,EAAE,CAAC;aACL,MAAM,EAAE;aACR,QAAQ,EAAE;aACV,QAAQ,CACP,iNAAiN,CAClN;QACH,WAAW,EAAE,CAAC;aACX,IAAI,CAAC,CAAC,SAAS,EAAE,OAAO,EAAE,UAAU,CAAC,CAAC;aACtC,OAAO,CAAC,SAAS,CAAC;aAClB,QAAQ,CACP,2NAA2N,CAC5N;QACH,OAAO,EAAE,CAAC;aACP,MAAM,CAAC,CAAC,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC;aAC9B,QAAQ,EAAE;aACV,QAAQ,CACP,8eAA8e,CAC/e;QACH,IAAI,EAAE,CAAC;aACJ,MAAM,EAAE;aACR,QAAQ,EAAE;aACV,QAAQ,CACP,qfAAqf,CACtf;QACH,MAAM,EAAE,CAAC;aACN,KAAK,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC;aACjB,QAAQ,EAAE;aACV,QAAQ,CACP,kXAAkX,CACnX;QACH,QAAQ,EAAE,CAAC;aACR,MAAM,EAAE;aACR,GAAG,EAAE;aACL,GAAG,CAAC,CAAC,CAAC;aACN,GAAG,CAAC,GAAG,CAAC;aACR,OAAO,CAAC,EAAE,CAAC;aACX,QAAQ,CACP,sKAAsK,CACvK;QACH,MAAM,EAAE,CAAC;aACN,MAAM,EAAE;aACR,QAAQ,EAAE;aACV,QAAQ,CAAC,wEAAwE,CAAC;QACrF,MAAM,EAAE,CAAC;aACN,MAAM,EAAE;aACR,GAAG,EAAE;aACL,GAAG,CAAC,CAAC,CAAC;aACN,GAAG,CAAC,UAAU,CAAC;aACf,QAAQ,EAAE;aACV,QAAQ,CACP,wEAAwE,UAAU,sQAAsQ,CACzV;QACH,IAAI,EAAE,CAAC;aACJ,MAAM,EAAE;aACR,QAAQ,EAAE;aACV,QAAQ,CACP,iKAAiK,CAClK;KACJ,CAAC;IACF,MAAM,EAAE,CAAC,CAAC,MAAM,CAAC;QACf,IAAI,EAAE,CAAC;aACJ,MAAM,CAAC;YACN,KAAK,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,2CAA2C,CAAC;YACvE,QAAQ,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,uBAAuB,CAAC;YACtD,WAAW,EAAE,CAAC;iBACX,MAAM,EAAE;iBACR,QAAQ,EAAE;iBACV,QAAQ,CAAC,gDAAgD,CAAC;YAC7D,IAAI,EAAE,CAAC;iBACJ,MAAM,EAAE;iBACR,QAAQ,CACP,gKAAgK,CACjK;SACJ,CAAC;aACD,QAAQ,CAAC,uCAAuC,CAAC;QACpD,OAAO,EAAE,CAAC;aACP,KAAK,CACJ,CAAC;aACE,MAAM,CAAC;YACN,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,mDAAmD,CAAC;YAC5E,YAAY,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,4BAA4B,CAAC;SAChE,CAAC;aACD,WAAW,EAAE;aACb,QAAQ,CACP,mIAAmI,CACpI,CACJ;aACA,QAAQ,CACP,uGAAuG,CACxG;KACJ,CAAC;IAEF,KAAK,CAAC,OAAO,CAAC,KAAK,EAAE,GAAG;QACtB,IAAI,KAAK,CAAC,WAAW,KAAK,UAAU,IAAI,KAAK,CAAC,QAAQ,GAAG,qBAAqB,EAAE,CAAC;YAC/E,MAAM,GAAG,CAAC,IAAI,CACZ,uBAAuB,EACvB,oCAAoC,qBAAqB,2DAA2D,EACpH;gBACE,GAAG,GAAG,CAAC,WAAW,CAAC,uBAAuB,CAAC;gBAC3C,UAAU,EAAE,KAAK,CAAC,WAAW;gBAC7B,OAAO,EAAE,KAAK,CAAC,QAAQ;gBACvB,GAAG,EAAE,qBAAqB;aAC3B,CACF,CAAC;QACJ,CAAC;QAED,IAAI,KAAK,CAAC,MAAM,KAAK,SAAS,IAAI,KAAK,CAAC,MAAM,KAAK,SAAS,EAAE,CAAC;YAC7D,MAAM,GAAG,CAAC,IAAI,CACZ,oBAAoB,EACpB,wFAAwF,EACxF,EAAE,GAAG,GAAG,CAAC,WAAW,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package/dist/services/openalex/openalex-service.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"openalex-service.d.ts","sourceRoot":"","sources":["../../../src/services/openalex/openalex-service.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,wBAAwB,CAAC;AAoBtD,OAAO,EACL,KAAK,aAAa,EAClB,KAAK,aAAa,EAClB,KAAK,kBAAkB,EACvB,KAAK,kBAAkB,EAIvB,KAAK,YAAY,EACjB,KAAK,YAAY,EAClB,MAAM,YAAY,CAAC;AAcpB;;;;;;;;GAQG;AACH,wBAAgB,WAAW,CAAC,EAAE,EAAE,MAAM,GAAG,MAAM,CA6C9C;AA+UD,cAAM,eAAe;IACnB,OAAO,CAAC,QAAQ,CAAC,OAAO,CAAS;IACjC,OAAO,CAAC,QAAQ,CAAC,MAAM,CAAS;;IAQhC,yFAAyF;IACzF,OAAO,CAAC,OAAO;IAoCf,OAAO,CAAC,2BAA2B;IA4CnC,OAAO,CAAC,aAAa;IAqCrB,sEAAsE;IAChE,MAAM,CAAC,MAAM,EAAE,YAAY,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,YAAY,CAAC;IA8FvE,4BAA4B;IACtB,OAAO,CAAC,MAAM,EAAE,aAAa,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,aAAa,CAAC;IAoC1E,oCAAoC;IAC9B,YAAY,CAAC,MAAM,EAAE,kBAAkB,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,kBAAkB,CAAC;CAuB1F;AAID,wBAAgB,mBAAmB,IAAI,IAAI,CAE1C;AAED,wBAAgB,kBAAkB,IAAI,eAAe,CAIpD"}
+{"version":3,"file":"openalex-service.d.ts","sourceRoot":"","sources":["../../../src/services/openalex/openalex-service.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,wBAAwB,CAAC;AAoBtD,OAAO,EACL,KAAK,aAAa,EAClB,KAAK,aAAa,EAClB,KAAK,kBAAkB,EACvB,KAAK,kBAAkB,EAIvB,KAAK,YAAY,EACjB,KAAK,YAAY,EAClB,MAAM,YAAY,CAAC;AA+BpB;;;;;;;;GAQG;AACH,wBAAgB,WAAW,CAAC,EAAE,EAAE,MAAM,GAAG,MAAM,CA6C9C;AA+UD,cAAM,eAAe;IACnB,OAAO,CAAC,QAAQ,CAAC,OAAO,CAAS;IACjC,OAAO,CAAC,QAAQ,CAAC,MAAM,CAAS;;IAQhC,yFAAyF;IACzF,OAAO,CAAC,OAAO;IAoCf,OAAO,CAAC,2BAA2B;IA4CnC,OAAO,CAAC,aAAa;IAqCrB,sEAAsE;IAChE,MAAM,CAAC,MAAM,EAAE,YAAY,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,YAAY,CAAC;IA8FvE,4BAA4B;IACtB,OAAO,CAAC,MAAM,EAAE,aAAa,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,aAAa,CAAC;IA2C1E,oCAAoC;IAC9B,YAAY,CAAC,MAAM,EAAE,kBAAkB,EAAE,GAAG,EAAE,OAAO,GAAG,OAAO,CAAC,kBAAkB,CAAC;CAuB1F;AAID,wBAAgB,mBAAmB,IAAI,IAAI,CAE1C;AAED,wBAAgB,kBAAkB,IAAI,eAAe,CAIpD"}

package/dist/services/openalex/openalex-service.js

@@ -7,6 +7,22 @@ import { fetchWithTimeout, httpStatusToErrorCode, withRetry } from '@cyanheads/m
 import { getServerConfig } from '../../config/server-config.js';
 import { DEFAULT_SELECT, ENTITY_TYPES, } from './types.js';
 import { redactUrlsInMessage } from './url-redaction.js';
+/**
+ * OpenAlex group_by fields that produce only true/false groups and reject
+ * cursor pagination (HTTP 400). These fields never have more than two groups,
+ * so cursor-based paging is unnecessary and the upstream rejects `cursor=*`.
+ */
+const BOOLEAN_GROUP_BY_FIELDS = new Set([
+    'is_retracted',
+    'is_paratext',
+    'is_oa',
+    'has_orcid',
+    'has_doi',
+    'has_raw_affiliation_string',
+    'open_access.is_oa',
+    'apc_paid',
+    'has_fulltext',
+]);
 /**
  * Build an OpenAlex filter string from a key-value record.
  * Input: { "cited_by_count": ">100", "is_oa": "true" }
@@ -549,11 +565,18 @@ class OpenAlexService {
         if (params.perPage !== undefined) {
             queryParams.per_page = String(params.perPage);
         }
-        // Only send cursor when explicitly provided — boolean group_by fields
-        // (is_retracted, has_orcid, etc.) reject cursor pagination entirely.
+        // Boolean group_by fields (is_retracted, has_orcid, etc.) only produce
+        // two groups (true/false) and reject cursor pagination with a 400.
+        // All other fields require cursor=* on the first request to enable
+        // cursor-based pagination — without it, next_cursor is never returned.
+        const baseField = params.groupBy.replace(/:include_unknown$/, '');
+        const isBooleanGroupBy = BOOLEAN_GROUP_BY_FIELDS.has(baseField);
         if (params.cursor) {
             queryParams.cursor = params.cursor;
         }
+        else if (!isBooleanGroupBy) {
+            queryParams.cursor = '*';
+        }
         const data = (await this.request(`/${params.entityType}`, queryParams, ctx));
         return {
             meta: {

package/dist/services/openalex/openalex-service.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@cyanheads/openalex-mcp-server",
-  "version": "0.6.13",
+  "version": "0.6.15",
   "description": "Access the OpenAlex academic research catalog - 270M+ publications through MCP. STDIO & Streamable HTTP.",
   "mcpName": "io.github.cyanheads/openalex-mcp-server",
   "type": "module",
@@ -20,7 +20,7 @@
     "lint:mcp": "bun scripts/lint-mcp.ts",
     "lint:packaging": "bun scripts/lint-packaging.ts",
     "list-skills": "bun scripts/list-skills.ts",
-    "bundle": "bun run build && npx -y @anthropic-ai/mcpb pack . dist/@cyanheads/openalex-mcp-server.mcpb",
+    "bundle": "bun run build && npx -y @anthropic-ai/mcpb pack . dist/openalex-mcp-server.mcpb",
     "audit:refresh": "rm -f bun.lock && bun install && bun audit",
     "changelog:build": "bun scripts/build-changelog.ts",
     "changelog:check": "bun scripts/build-changelog.ts --check",
@@ -37,10 +37,13 @@
     "academic-research",
     "academic-search",
     "bibliometrics",
+    "bun",
     "citation-analysis",
     "literature-search",
     "scholarly-data",
     "scholarly-research",
+    "stdio",
+    "streamable-http",
     "typescript"
   ],
   "author": "cyanheads <casey@caseyjhand.com> (https://github.com/cyanheads/openalex-mcp-server#readme)",
@@ -72,12 +75,12 @@
     "access": "public"
   },
   "dependencies": {
-    "@cyanheads/mcp-ts-core": "^0.9.6",
+    "@cyanheads/mcp-ts-core": "^0.9.13",
     "pino-pretty": "^13.1.3",
     "zod": "^4.4.3"
   },
   "devDependencies": {
-    "@biomejs/biome": "^2.4.15",
+    "@biomejs/biome": "^2.4.16",
     "@types/node": "^25.9.1",
     "depcheck": "^1.4.7",
     "ignore": "^7.0.5",

package/server.json

@@ -6,7 +6,7 @@
     "url": "https://github.com/cyanheads/openalex-mcp-server",
     "source": "github"
   },
-  "version": "0.6.13",
+  "version": "0.6.15",
   "remotes": [
     {
       "type": "streamable-http",
@@ -19,7 +19,7 @@
       "registryBaseUrl": "https://registry.npmjs.org",
       "identifier": "@cyanheads/openalex-mcp-server",
       "runtimeHint": "node",
-      "version": "0.6.13",
+      "version": "0.6.15",
       "packageArguments": [
         {
           "type": "positional",
@@ -61,7 +61,7 @@
       "registryBaseUrl": "https://registry.npmjs.org",
       "identifier": "@cyanheads/openalex-mcp-server",
       "runtimeHint": "node",
-      "version": "0.6.13",
+      "version": "0.6.15",
       "packageArguments": [
         {
           "type": "positional",