npm - @cyanheads/brapi-mcp-server - Versions diffs - 0.5.4 → 0.6.0 - Mend

@cyanheads/brapi-mcp-server 0.5.4 → 0.6.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (144) hide show

package/dist/mcp-server/tools/definitions/brapi-raw-get.tool.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"brapi-raw-get.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/brapi-raw-get.tool.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AAuDjE,eAAO,MAAM,WAAW~~;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GA8HtB~~,CAAC"}
1	+ {"version":3,"file":"brapi-raw-get.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/brapi-raw-get.tool.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AAuDjE,eAAO,MAAM,WAAW;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAoItB,CAAC"}

package/dist/mcp-server/tools/definitions/brapi-raw-get.tool.js CHANGED Viewed

@@ -16,8 +16,7 @@ import { JsonRpcErrorCode } from '@cyanheads/mcp-ts-core/errors';
 import { getServerConfig } from '../../../config/server-config.js';
 import { getBrapiClient, } from '../../../services/brapi-client/index.js';
 import { getCanvasBridge } from '../../../services/canvas-bridge/index.js';
-import { DEFAULT_ALIAS, getServerRegistry } from '../../../services/server-registry/index.js';
-import { AliasInput, DataframeHandleSchema, extractListRows, LoadLimitInput, renderDataframeHandle, spillToCanvas, toDataframeHandle, } from '../shared/find-helpers.js';
+import { AliasInput, DataframeHandleSchema, extractListRows, LoadLimitInput, renderDataframeHandle, requireRegisteredConnection, spillToCanvas, toDataframeHandle, } from '../shared/find-helpers.js';
 import { suggestForGet } from '../shared/raw-routing-hints.js';
 const PaginationSchema = z
     .object({
@@ -52,6 +51,12 @@ export const brapiRawGet = tool('brapi_raw_get', {
     description: 'Passthrough to any BrAPI GET /{path} endpoint. Returns the raw upstream envelope without enrichment or foreign-key resolution. Emits a `suggestion` field when a curated tool exists for the same data. Spills to a canvas dataframe when the upstream advertises more rows than `loadLimit` AND the result is a list shape (`result` array or `result.data` envelope); inline `result` is unchanged. Skips spillover when the caller drives paging via `params.page` / `params.pageSize`.',
     annotations: { readOnlyHint: true, openWorldHint: true },
     errors: [
+        {
+            reason: 'unknown_alias',
+            code: JsonRpcErrorCode.NotFound,
+            when: 'No connection has been registered under the requested alias',
+            recovery: 'Run brapi_connect with this alias (or omit `alias` to use the default connection) before calling brapi_raw_get.',
+        },
         {
             reason: 'cross_origin_path',
             code: JsonRpcErrorCode.ValidationError,
@@ -73,11 +78,10 @@ export const brapiRawGet = tool('brapi_raw_get', {
     }),
     output: OutputSchema,
     async handler(input, ctx) {
-        const registry = getServerRegistry();
         const client = getBrapiClient();
         const bridge = getCanvasBridge();
         const config = getServerConfig();
-        const connection = await registry.get(ctx, input.alias ?? DEFAULT_ALIAS);
+        const connection = await requireRegisteredConnection(ctx, input.alias);
         // The path is appended to the registered baseUrl; if the caller smuggles a
         // full URL (http://evil/...) `new URL()` would silently hijack the request.
         if (/^https?:\/\//i.test(input.path)) {

package/dist/mcp-server/tools/definitions/brapi-raw-get.tool.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ {"version":3,"file":"brapi-raw-get.tool.js","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/brapi-raw-get.tool.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAEH,OAAO,EAAE,IAAI,EAAE,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AACjE,OAAO,EAAE,eAAe,EAAE,MAAM,2BAA2B,CAAC;AAC5D,OAAO,EAGL,cAAc,GACf,MAAM,kCAAkC,CAAC;AAC1C,OAAO,EAAE,eAAe,EAAE,MAAM,mCAAmC,CAAC;AACpE,OAAO,EACL,UAAU,EACV,qBAAqB,EACrB,eAAe,EACf,cAAc,EACd,qBAAqB,EACrB,2BAA2B,EAC3B,aAAa,EACb,iBAAiB,GAClB,MAAM,2BAA2B,CAAC;AACnC,OAAO,EAAE,aAAa,EAAE,MAAM,gCAAgC,CAAC;AAE/D,MAAM,gBAAgB,GAAG,CAAC;KACvB,MAAM,CAAC;IACN,WAAW,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,4CAA4C,CAAC;IAC9E,QAAQ,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,gBAAgB,CAAC;IAC/C,UAAU,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,iDAAiD,CAAC;IAClF,UAAU,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,sCAAsC,CAAC;CACxE,CAAC;KACD,WAAW,EAAE;KACb,QAAQ,EAAE;KACV,QAAQ,CAAC,qEAAqE,CAAC,CAAC;AAEnF,MAAM,YAAY,GAAG,CAAC,CAAC,MAAM,CAAC;IAC5B,KAAK,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,yDAAyD,CAAC;IACrF,GAAG,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,QAAQ,CAAC,sEAAsE,CAAC;IAChG,IAAI,EAAE,CAAC;SACJ,MAAM,EAAE;SACR,QAAQ,CAAC,2EAA2E,CAAC;IACxF,QAAQ,EAAE,CAAC;SACR,MAAM,CAAC;QACN,UAAU,EAAE,gBAAgB;KAC7B,CAAC;SACD,WAAW,EAAE;SACb,QAAQ,CAAC,0EAA0E,CAAC;IACvF,MAAM,EAAE,CAAC,CAAC,OAAO,EAAE,CAAC,QAAQ,CAAC,iEAAiE,CAAC;IAC/F,UAAU,EAAE,CAAC;SACV,MAAM,EAAE;SACR,QAAQ,EAAE;SACV,QAAQ,CAAC,+DAA+D,CAAC;IAC5E,SAAS,EAAE,qBAAqB,CAAC,QAAQ,EAAE,CAAC,QAAQ,CAClD,qNAAqN,CACtN;CACF,CAAC,CAAC;AAIH,MAAM,CAAC,MAAM,WAAW,GAAG,IAAI,CAAC,eAAe,EAAE;IAC/C,WAAW,EACT,4dAA4d;IAC9d,WAAW,EAAE,EAAE,YAAY,EAAE,IAAI,EAAE,aAAa,EAAE,IAAI,EAAE;IACxD,MAAM,EAAE;QACN;YACE,MAAM,EAAE,eAAe;YACvB,IAAI,EAAE,gBAAgB,CAAC,QAAQ;YAC/B,IAAI,EAAE,6DAA6D;YACnE,QAAQ,EACN,iHAAiH;SACpH;QACD;YACE,MAAM,EAAE,mBAAmB;YAC3B,IAAI,EAAE,gBAAgB,CAAC,eAAe;YACtC,IAAI,EAAE,gEAAgE;YACtE,QAAQ,EACN,wFAAwF;SAC3F;KACO;IACV,KAAK,EAAE,CAAC,CAAC,MAAM,CAAC;QACd,KAAK,EAAE,UAAU;QACjB,IAAI,EAAE,CAAC;aACJ,MAAM,EAAE;aACR,GAAG,CAAC,CAAC,CAAC;aACN,QAAQ,CAAC,uEAAuE,CAAC;QACpF,MAAM,EAAE,CAAC;aACN,MAAM,CACL,CAAC,CAAC,MAAM,EAAE,EACV,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,OAAO,EAAE,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAC3F;aACA,QAAQ,EAAE;aACV,QAAQ,CAAC,uEAAuE,CAAC;QACpF,SAAS,EAAE,cAAc;KAC1B,CAAC;IACF,MAAM,EAAE,YAAY;IAEpB,KAAK,CAAC,OAAO,CAAC,KAAK,EAAE,GAAG;QACtB,MAAM,MAAM,GAAG,cAAc,EAAE,CAAC;QAChC,MAAM,MAAM,GAAG,eAAe,EAAE,CAAC;QACjC,MAAM,MAAM,GAAG,eAAe,EAAE,CAAC;QAEjC,MAAM,UAAU,GAAG,MAAM,2BAA2B,CAAC,GAAG,EAAE,KAAK,CAAC,KAAK,CAAC,CAAC;QACvE,2EAA2E;QAC3E,4EAA4E;QAC5E,IAAI,eAAe,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC;YACrC,MAAM,GAAG,CAAC,IAAI,CAAC,mBAAmB,EAAE,sDAAsD,EAAE;gBAC1F,IAAI,EAAE,KAAK,CAAC,IAAI;gBAChB,GAAG,GAAG,CAAC,WAAW,CAAC,mBAAmB,CAAC;aACxC,CAAC,CAAC;QACL,CAAC;QACD,MAAM,IAAI,GAAG,aAAa,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;QACvC,MAAM,SAAS,GAAG,KAAK,CAAC,SAAS,IAAI,MAAM,CAAC,SAAS,CAAC;QACtD,uEAAuE;QACvE,yEAAyE;QACzE,yEAAyE;QACzE,MAAM,kBAAkB,GACtB,KAAK,CAAC,MAAM,EAAE,IAAI,KAAK,SAAS,IAAI,KAAK,CAAC,MAAM,EAAE,QAAQ,KAAK,SAAS,CAAC;QAC3E,MAAM,MAAM,GAA4B,EAAE,GAAG,CAAC,KAAK,CAAC,MAAM,IAAI,EAAE,CAAC,EAAE,CAAC;QACpE,IAAI,CAAC,kBAAkB;YAAE,MAAM,CAAC,QAAQ,GAAG,SAAS,CAAC;QAErD,MAAM,cAAc,GAAwB,EAAE,CAAC;QAC/C,IAAI,UAAU,CAAC,YAAY;YAAE,cAAc,CAAC,IAAI,GAAG,UAAU,CAAC,YAAY,CAAC;QAC3E,cAAc,CAAC,MAAM,GAAG,MAAoD,CAAC;QAC7E,MAAM,QAAQ,GAAG,MAAM,MAAM,CAAC,GAAG,CAAU,UAAU,CAAC,OAAO,EAAE,IAAI,EAAE,GAAG,EAAE,cAAc,CAAC,CAAC;QAE1F,MAAM,GAAG,GAAG,eAAe,CAAC,UAAU,CAAC,OAAO,EAAE,IAAI,EAAE,KAAK,CAAC,MAAM,CAAC,CAAC;QACpE,MAAM,MAAM,GAAW;YACrB,KAAK,EAAE,UAAU,CAAC,KAAK;YACvB,GAAG;YACH,IAAI;YACJ,QAAQ,EAAE,aAAa,CAAC,QAAQ,CAAC,QAAQ,CAAC;YAC1C,MAAM,EAAE,QAAQ,CAAC,MAAM;SACxB,CAAC;QACF,MAAM,UAAU,GAAG,aAAa,CAAC,IAAI,CAAC,CAAC;QACvC,IAAI,UAAU;YAAE,MAAM,CAAC,UAAU,GAAG,UAAU,CAAC;QAE/C,IAAI,CAAC,kBAAkB,EAAE,CAAC;YACxB,MAAM,UAAU,GAAG,QAAQ,CAAC,QAAQ,EAAE,UAAU,EAAE,UAAU,CAAC;YAC7D,MAAM,IAAI,GAAG,eAAe,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC;YAC9C,IACE,IAAI,KAAK,IAAI;gBACb,IAAI,CAAC,MAAM,GAAG,CAAC;gBACf,OAAO,UAAU,KAAK,QAAQ;gBAC9B,UAAU,GAAG,SAAS,EACtB,CAAC;gBACD,MAAM,KAAK,GAAG,MAAM,aAAa,CAAC;oBAChC,MAAM;oBACN,MAAM;oBACN,UAAU;oBACV,GAAG;oBACH,SAAS,EAAE,IAAI;oBACf,UAAU;oBACV,SAAS;oBACT,IAAI;oBACJ,OAAO,EAAE,CAAC,KAAK,CAAC,MAAM,IAAI,EAAE,CAA4B;oBACxD,MAAM,EAAE,SAAS;iBAClB,CAAC,CAAC;gBACH,MAAM,CAAC,SAAS,GAAG,iBAAiB,CAAC,KAAK,CAAC,SAAS,CAAC,CAAC;YACxD,CAAC;QACH,CAAC;QACD,OAAO,MAAM,CAAC;IAChB,CAAC;IAED,MAAM,EAAE,CAAC,MAAM,EAAE,EAAE;QACjB,MAAM,KAAK,GAAa,EAAE,CAAC;QAC3B,KAAK,CAAC,IAAI,CAAC,SAAS,MAAM,CAAC,IAAI,QAAQ,MAAM,CAAC,KAAK,IAAI,CAAC,CAAC;QACzD,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QACf,KAAK,CAAC,IAAI,CAAC,QAAQ,MAAM,CAAC,GAAG,EAAE,CAAC,CAAC;QACjC,MAAM,UAAU,GAAG,MAAM,CAAC,QAAQ,CAAC,UAAU,CAAC;QAC9C,IAAI,UAAU,EAAE,CAAC;YACf,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;YACf,KAAK,CAAC,IAAI,CACR,wBAAwB,UAAU,CAAC,WAAW,OAAO,UAAU,CAAC,UAAU,cAAc,UAAU,CAAC,QAAQ,gBAAgB,UAAU,CAAC,UAAU,EAAE,CACnJ,CAAC;QACJ,CAAC;QACD,IAAI,MAAM,CAAC,UAAU,EAAE,CAAC;YACtB,KA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package/dist/mcp-server/tools/definitions/brapi-raw-search.tool.d.ts CHANGED Viewed

@@ -45,6 +45,11 @@ export declare const brapiRawSearch: import("@cyanheads/mcp-ts-core").ToolDefini
         maxRows: z.ZodOptional<z.ZodNumber>;
     }, z.core.$strip>>;
 }, z.core.$strip>, readonly [{
+    readonly reason: "unknown_alias";
+    readonly code: JsonRpcErrorCode.NotFound;
+    readonly when: "No connection has been registered under the requested alias";
+    readonly recovery: "Run brapi_connect with this alias (or omit `alias` to use the default connection) before calling brapi_raw_search.";
+}, {
     readonly reason: "search_endpoint_disabled";
     readonly code: JsonRpcErrorCode.ValidationError;
     readonly when: "The active dialect declares this POST /search/{noun} route as known-dead on this server";

package/dist/mcp-server/tools/definitions/brapi-raw-search.tool.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"brapi-raw-search.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/brapi-raw-search.tool.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AA6DjE,eAAO,MAAM,cAAc~~;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GA6JzB~~,CAAC"}
1	+ {"version":3,"file":"brapi-raw-search.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/brapi-raw-search.tool.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AA6DjE,eAAO,MAAM,cAAc;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAmKzB,CAAC"}

package/dist/mcp-server/tools/definitions/brapi-raw-search.tool.js CHANGED Viewed

@@ -16,8 +16,7 @@ import { getServerConfig } from '../../../config/server-config.js';
 import { getBrapiClient, } from '../../../services/brapi-client/index.js';
 import { resolveDialect } from '../../../services/brapi-dialect/index.js';
 import { getCanvasBridge } from '../../../services/canvas-bridge/index.js';
-import { DEFAULT_ALIAS, getServerRegistry } from '../../../services/server-registry/index.js';
-import { AliasInput, buildRequestOptions, DataframeHandleSchema, extractListRows, LoadLimitInput, renderDataframeHandle, spillToCanvas, toDataframeHandle, } from '../shared/find-helpers.js';
+import { AliasInput, buildRequestOptions, DataframeHandleSchema, extractListRows, LoadLimitInput, renderDataframeHandle, requireRegisteredConnection, spillToCanvas, toDataframeHandle, } from '../shared/find-helpers.js';
 import { suggestForSearch } from '../shared/raw-routing-hints.js';
 const PaginationSchema = z
     .object({
@@ -56,6 +55,12 @@ export const brapiRawSearch = tool('brapi_raw_search', {
     description: 'Passthrough to any BrAPI POST /search/{noun} endpoint, returning the resolved envelope (async polling resolved upstream). Spills to a canvas dataframe when the upstream advertises more rows than `loadLimit` AND the result is a list shape; inline `result` is unchanged. Skips spillover when the caller drives paging via `body.page` / `body.pageSize`. No distributions or foreign-key resolution applied.',
     annotations: { readOnlyHint: true, openWorldHint: true },
     errors: [
+        {
+            reason: 'unknown_alias',
+            code: JsonRpcErrorCode.NotFound,
+            when: 'No connection has been registered under the requested alias',
+            recovery: 'Run brapi_connect with this alias (or omit `alias` to use the default connection) before calling brapi_raw_search.',
+        },
         {
             reason: 'search_endpoint_disabled',
             code: JsonRpcErrorCode.ValidationError,
@@ -77,11 +82,10 @@ export const brapiRawSearch = tool('brapi_raw_search', {
     }),
     output: OutputSchema,
     async handler(input, ctx) {
-        const registry = getServerRegistry();
         const client = getBrapiClient();
         const bridge = getCanvasBridge();
         const config = getServerConfig();
-        const connection = await registry.get(ctx, input.alias ?? DEFAULT_ALIAS);
+        const connection = await requireRegisteredConnection(ctx, input.alias);
         const requestOptions = {};
         if (connection.resolvedAuth)
             requestOptions.auth = connection.resolvedAuth;

package/dist/mcp-server/tools/definitions/brapi-raw-search.tool.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ 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package/dist/mcp-server/tools/definitions/brapi-server-info.tool.d.ts CHANGED Viewed

@@ -7,6 +7,7 @@
  * @module mcp-server/tools/definitions/brapi-server-info.tool
  */
 import { z } from '@cyanheads/mcp-ts-core';
+import { JsonRpcErrorCode } from '@cyanheads/mcp-ts-core/errors';
 export declare const brapiServerInfo: import("@cyanheads/mcp-ts-core").ToolDefinition<z.ZodObject<{
     alias: z.ZodOptional<z.ZodString>;
     forceRefresh: z.ZodDefault<z.ZodBoolean>;
@@ -50,6 +51,8 @@ export declare const brapiServerInfo: import("@cyanheads/mcp-ts-core").ToolDefin
         envVar: z.ZodString;
         disabledSearchEndpoints: z.ZodArray<z.ZodString>;
         notes: z.ZodArray<z.ZodString>;
+        verifiedMappingCount: z.ZodOptional<z.ZodNumber>;
+        inferredMappingCount: z.ZodOptional<z.ZodNumber>;
     }, z.core.$strip>;
     content: z.ZodObject<{
         crops: z.ZodArray<z.ZodString>;
@@ -66,5 +69,10 @@ export declare const brapiServerInfo: import("@cyanheads/mcp-ts-core").ToolDefin
     }, z.core.$strip>>;
     notes: z.ZodArray<z.ZodString>;
     fetchedAt: z.ZodString;
-}, z.core.$strip>, undefined>;
+}, z.core.$strip>, readonly [{
+    readonly reason: "unknown_alias";
+    readonly code: JsonRpcErrorCode.NotFound;
+    readonly when: "No connection has been registered under the requested alias";
+    readonly recovery: "Run brapi_connect with this alias (or omit `alias` to use the default connection) before calling brapi_server_info.";
+}]>;
 //# sourceMappingURL=brapi-server-info.tool.d.ts.map

package/dist/mcp-server/tools/definitions/brapi-server-info.tool.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"brapi-server-info.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/brapi-server-info.tool.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;~~AAUjD~~,eAAO,MAAM,eAAe~~;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;6BAkC1B~~,CAAC"}
1	+ {"version":3,"file":"brapi-server-info.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/brapi-server-info.tool.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAEH,OAAO,EAAQ,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACjD,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AAUjE,eAAO,MAAM,eAAe;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GA0C1B,CAAC"}

package/dist/mcp-server/tools/definitions/brapi-server-info.tool.js CHANGED Viewed

@@ -7,19 +7,28 @@
  * @module mcp-server/tools/definitions/brapi-server-info.tool
  */
 import { tool, z } from '@cyanheads/mcp-ts-core';
+import { JsonRpcErrorCode } from '@cyanheads/mcp-ts-core/errors';
 import { getBrapiClient } from '../../../services/brapi-client/index.js';
 import { getCapabilityRegistry } from '../../../services/capability-registry/index.js';
-import { DEFAULT_ALIAS, getServerRegistry } from '../../../services/server-registry/index.js';
+import { requireRegisteredConnection } from '../shared/find-helpers.js';
 import { buildOrientationEnvelope, formatOrientationEnvelope, OrientationEnvelopeSchema, } from '../shared/orientation-envelope.js';
 export const brapiServerInfo = tool('brapi_server_info', {
     description: 'Return the full orientation envelope for a registered BrAPI connection — server identity, capabilities, content counts, and notes. Re-running refreshes the cached capability scan; pass an alias to read a non-default connection.',
     annotations: { readOnlyHint: true, idempotentHint: true },
+    errors: [
+        {
+            reason: 'unknown_alias',
+            code: JsonRpcErrorCode.NotFound,
+            when: 'No connection has been registered under the requested alias',
+            recovery: 'Run brapi_connect with this alias (or omit `alias` to use the default connection) before calling brapi_server_info.',
+        },
+    ],
     input: z.object({
         alias: z
             .string()
             .regex(/^[a-zA-Z0-9_-]+$/)
             .optional()
-            .describe('Connection alias. Omit to use the default connection from the most recent `brapi_connect` call.'),
+            .describe('Connection alias. Omit to read the connection registered under alias `default` — i.e. a prior `brapi_connect` call that did not specify an alias. Calls that used a non-default alias must pass that same alias here.'),
         forceRefresh: z
             .boolean()
             .default(false)
@@ -27,10 +36,9 @@ export const brapiServerInfo = tool('brapi_server_info', {
     }),
     output: OrientationEnvelopeSchema,
     async handler(input, ctx) {
-        const registry = getServerRegistry();
         const capabilities = getCapabilityRegistry();
         const client = getBrapiClient();
-        const connection = await registry.get(ctx, input.alias ?? DEFAULT_ALIAS);
+        const connection = await requireRegisteredConnection(ctx, input.alias);
         if (input.forceRefresh) {
             await capabilities.invalidate(connection.baseUrl, ctx);
         }

package/dist/mcp-server/tools/definitions/brapi-server-info.tool.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/mcp-server/tools/definitions/brapi-submit-observations.tool.d.ts CHANGED Viewed

@@ -85,6 +85,11 @@ export declare const brapiSubmitObservations: import("@cyanheads/mcp-ts-core").T
         warnings: z.ZodOptional<z.ZodArray<z.ZodString>>;
     }, z.core.$strip>], "mode">;
 }, z.core.$strip>, readonly [{
+    readonly reason: "unknown_alias";
+    readonly code: JsonRpcErrorCode.NotFound;
+    readonly when: "No connection has been registered under the requested alias";
+    readonly recovery: "Run brapi_connect with this alias (or omit `alias` to use the default connection) before calling brapi_submit_observations.";
+}, {
     readonly reason: "observations_unsupported";
     readonly code: JsonRpcErrorCode.ValidationError;
     readonly when: "BrAPI server does not advertise /observations";

package/dist/mcp-server/tools/definitions/brapi-submit-observations.tool.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"brapi-submit-observations.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/brapi-submit-observations.tool.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;GAUG;AAEH,OAAO,EAA2C,CAAC,EAAE,MAAM,wBAAwB,CAAC;AACpF,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AAkPjE,eAAO,MAAM,uBAAuB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GA4SlC,CAAC"}

package/dist/mcp-server/tools/definitions/brapi-submit-observations.tool.js CHANGED Viewed

@@ -15,8 +15,7 @@ import { getServerConfig } from '../../../config/server-config.js';
 import { getBrapiClient } from '../../../services/brapi-client/index.js';
 import { resolveDialect } from '../../../services/brapi-dialect/index.js';
 import { getCapabilityRegistry } from '../../../services/capability-registry/index.js';
-import { DEFAULT_ALIAS, getServerRegistry } from '../../../services/server-registry/index.js';
-import { AliasInput, buildRequestOptions, companionRequestOptions, extractRows, isUpstreamNotFound, } from '../shared/find-helpers.js';
+import { AliasInput, buildRequestOptions, companionRequestOptions, extractRows, isUpstreamNotFound, requireRegisteredConnection, } from '../shared/find-helpers.js';
 const ObservationRowSchema = z
     .object({
     observationDbId: z
@@ -165,6 +164,12 @@ const OutputSchema = z.object({
         .describe('Mode-specific result — discriminated by `mode`.'),
 });
 const SUBMIT_ERRORS = [
+    {
+        reason: 'unknown_alias',
+        code: JsonRpcErrorCode.NotFound,
+        when: 'No connection has been registered under the requested alias',
+        recovery: 'Run brapi_connect with this alias (or omit `alias` to use the default connection) before calling brapi_submit_observations.',
+    },
     {
         reason: 'observations_unsupported',
         code: JsonRpcErrorCode.ValidationError,
@@ -231,11 +236,10 @@ export const brapiSubmitObservations = tool('brapi_submit_observations', {
     output: OutputSchema,
     auth: ['brapi:write:observations'],
     async handler(input, ctx) {
-        const registry = getServerRegistry();
         const capabilities = getCapabilityRegistry();
         const client = getBrapiClient();
         const config = getServerConfig();
-        const connection = await registry.get(ctx, input.alias ?? DEFAULT_ALIAS);
+        const connection = await requireRegisteredConnection(ctx, input.alias);
         const capabilityLookup = {};
         if (connection.resolvedAuth)
             capabilityLookup.auth = connection.resolvedAuth;

package/dist/mcp-server/tools/definitions/brapi-submit-observations.tool.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/mcp-server/tools/definitions/brapi-walk-pedigree.tool.d.ts CHANGED Viewed

@@ -9,21 +9,22 @@
  * @module mcp-server/tools/definitions/brapi-walk-pedigree.tool
  */
 import { z } from '@cyanheads/mcp-ts-core';
+import { JsonRpcErrorCode } from '@cyanheads/mcp-ts-core/errors';
 export declare const brapiWalkPedigree: import("@cyanheads/mcp-ts-core").ToolDefinition<z.ZodObject<{
     germplasmDbIds: z.ZodArray<z.ZodString>;
     direction: z.ZodDefault<z.ZodEnum<{
+        both: "both";
         ancestors: "ancestors";
         descendants: "descendants";
-        both: "both";
     }>>;
     maxDepth: z.ZodDefault<z.ZodNumber>;
     alias: z.ZodOptional<z.ZodString>;
 }, z.core.$strip>, z.ZodObject<{
     alias: z.ZodString;
     direction: z.ZodEnum<{
+        both: "both";
         ancestors: "ancestors";
         descendants: "descendants";
-        both: "both";
     }>;
     maxDepth: z.ZodNumber;
     nodes: z.ZodArray<z.ZodObject<{
@@ -31,6 +32,12 @@ export declare const brapiWalkPedigree: import("@cyanheads/mcp-ts-core").ToolDef
         germplasmName: z.ZodOptional<z.ZodString>;
         depth: z.ZodNumber;
         isRoot: z.ZodBoolean;
+        direction: z.ZodEnum<{
+            root: "root";
+            ancestor: "ancestor";
+            descendant: "descendant";
+            both: "both";
+        }>;
     }, z.core.$strip>>;
     edges: z.ZodArray<z.ZodObject<{
         from: z.ZodString;
@@ -48,5 +55,10 @@ export declare const brapiWalkPedigree: import("@cyanheads/mcp-ts-core").ToolDef
     deadEndCount: z.ZodNumber;
     truncated: z.ZodBoolean;
     warnings: z.ZodArray<z.ZodString>;
-}, z.core.$strip>, undefined>;
+}, z.core.$strip>, readonly [{
+    readonly reason: "unknown_alias";
+    readonly code: JsonRpcErrorCode.NotFound;
+    readonly when: "No connection has been registered under the requested alias";
+    readonly recovery: "Run brapi_connect with this alias (or omit `alias` to use the default connection) before calling brapi_walk_pedigree.";
+}]>;
 //# sourceMappingURL=brapi-walk-pedigree.tool.d.ts.map

package/dist/mcp-server/tools/definitions/brapi-walk-pedigree.tool.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"brapi-walk-pedigree.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/brapi-walk-pedigree.tool.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AAEH,OAAO,EAAsB,CAAC,EAAE,MAAM,wBAAwB,CAAC;~~AA0F~~/D,eAAO,MAAM,iBAAiB~~;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;6BA0N5B~~,CAAC"}
1	+ {"version":3,"file":"brapi-walk-pedigree.tool.d.ts","sourceRoot":"","sources":["../../../../src/mcp-server/tools/definitions/brapi-walk-pedigree.tool.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AAEH,OAAO,EAAsB,CAAC,EAAE,MAAM,wBAAwB,CAAC;AAC/D,OAAO,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AAmGjE,eAAO,MAAM,iBAAiB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAkO5B,CAAC"}

package/dist/mcp-server/tools/definitions/brapi-walk-pedigree.tool.js CHANGED Viewed

@@ -9,10 +9,10 @@
  * @module mcp-server/tools/definitions/brapi-walk-pedigree.tool
  */
 import { tool, z } from '@cyanheads/mcp-ts-core';
+import { JsonRpcErrorCode } from '@cyanheads/mcp-ts-core/errors';
 import { getBrapiClient } from '../../../services/brapi-client/index.js';
 import { getCapabilityRegistry } from '../../../services/capability-registry/index.js';
-import { DEFAULT_ALIAS, getServerRegistry } from '../../../services/server-registry/index.js';
-import { AliasInput, buildRequestOptions, isUpstreamNotFound } from '../shared/find-helpers.js';
+import { AliasInput, buildRequestOptions, isUpstreamNotFound, requireRegisteredConnection, } from '../shared/find-helpers.js';
 const DEFAULT_MAX_DEPTH = 3;
 const MAX_NODES = 1_000;
 const NodeSchema = z
@@ -25,6 +25,9 @@ const NodeSchema = z
         .nonnegative()
         .describe('Min distance from any root germplasm (0 for roots).'),
     isRoot: z.boolean().describe('True when this node is one of the starting germplasm.'),
+    direction: z
+        .enum(['root', 'ancestor', 'descendant', 'both'])
+        .describe('Side of the root this node was reached from. `root` = the starting germplasm itself. `ancestor` = reached via /pedigree (a parent of the root or one of its parents). `descendant` = reached via /progeny. `both` = encountered as both an ancestor and a descendant in a bidirectional walk (rare — backcross or selfing chain).'),
 })
     .describe('One germplasm reached during the walk.');
 const EdgeSchema = z
@@ -87,6 +90,14 @@ const OutputSchema = z.object({
 export const brapiWalkPedigree = tool('brapi_walk_pedigree', {
     description: 'Walk germplasm ancestry or descendancy as a deduplicated DAG, with multi-generation traversal, cycle detection, and depth limits. Returns nodes + edges plus traversal stats (depthReached, rootCount, leafCount, cycleCount, deadEndCount).',
     annotations: { readOnlyHint: true, openWorldHint: true },
+    errors: [
+        {
+            reason: 'unknown_alias',
+            code: JsonRpcErrorCode.NotFound,
+            when: 'No connection has been registered under the requested alias',
+            recovery: 'Run brapi_connect with this alias (or omit `alias` to use the default connection) before calling brapi_walk_pedigree.',
+        },
+    ],
     input: z.object({
         germplasmDbIds: z
             .array(z.string().min(1))
@@ -108,10 +119,9 @@ export const brapiWalkPedigree = tool('brapi_walk_pedigree', {
     }),
     output: OutputSchema,
     async handler(input, ctx) {
-        const registry = getServerRegistry();
         const capabilities = getCapabilityRegistry();
         const client = getBrapiClient();
-        const connection = await registry.get(ctx, input.alias ?? DEFAULT_ALIAS);
+        const connection = await requireRegisteredConnection(ctx, input.alias);
         const capabilityLookup = {};
         if (connection.resolvedAuth)
             capabilityLookup.auth = connection.resolvedAuth;
@@ -165,7 +175,7 @@ export const brapiWalkPedigree = tool('brapi_walk_pedigree', {
                 }
                 for (const parent of result.parents) {
                     const already = state.nodes.has(parent.germplasmDbId);
-                    registerNode(state, parent.germplasmDbId, parent.germplasmName, depth);
+                    registerNode(state, parent.germplasmDbId, parent.germplasmName, depth, 'ancestor');
                     const edge = {
                         from: parent.germplasmDbId,
                         to: result.id,
@@ -189,7 +199,7 @@ export const brapiWalkPedigree = tool('brapi_walk_pedigree', {
                 }
                 for (const child of result.children) {
                     const already = state.nodes.has(child.germplasmDbId);
-                    registerNode(state, child.germplasmDbId, child.germplasmName, depth);
+                    registerNode(state, child.germplasmDbId, child.germplasmName, depth, 'descendant');
                     const edge = {
                         from: child.germplasmDbId,
                         to: result.id,
@@ -250,8 +260,7 @@ export const brapiWalkPedigree = tool('brapi_walk_pedigree', {
                 const parts = [`**${node.germplasmName ?? node.germplasmDbId}**`];
                 parts.push(`id=\`${node.germplasmDbId}\``);
                 parts.push(`depth=${node.depth}`);
-                if (node.isRoot)
-                    parts.push('root');
+                parts.push(node.direction);
                 lines.push(`- ${parts.join(' · ')}`);
             }
         }
@@ -277,21 +286,35 @@ function createWalkState(rootIds) {
     const nodes = new Map();
     const frontier = new Set();
     for (const id of rootIds) {
-        nodes.set(id, { germplasmDbId: id, depth: 0, isRoot: true });
+        nodes.set(id, { germplasmDbId: id, depth: 0, isRoot: true, direction: 'root' });
         frontier.add(id);
     }
     return { nodes, edges: new Map(), frontier };
 }
-function registerNode(state, id, name, depth) {
+/**
+ * Add a node to the walk state. When `id` is already registered, merge the
+ * incoming `side` with the existing direction — `ancestor` + `descendant` →
+ * `both`. Roots are never overwritten. Depth converges to the minimum across
+ * encounters.
+ */
+function registerNode(state, id, name, depth, side) {
     const existing = state.nodes.get(id);
     if (existing) {
         if (!existing.germplasmName && name)
             existing.germplasmName = name;
         if (depth < existing.depth)
             existing.depth = depth;
+        if (existing.direction !== 'root' && existing.direction !== side) {
+            existing.direction = 'both';
+        }
         return;
     }
-    const node = { germplasmDbId: id, depth, isRoot: false };
+    const node = {
+        germplasmDbId: id,
+        depth,
+        isRoot: false,
+        direction: side,
+    };
     if (name)
         node.germplasmName = name;
     state.nodes.set(id, node);
@@ -335,7 +358,7 @@ async function expandNode(id, input) {
 }
 async function rootExists(id, client, connection, ctx) {
     try {
-        const env = await client.get(connection.baseUrl, `/germplasm/${encodeURIComponent(id)}/pedigree`, ctx, buildRequestOptions(connection));
+        const env = await client.get(connection.baseUrl, `/germplasm/${encodeURIComponent(id)}/pedigree`, ctx, buildRequestOptions(connection, undefined, { singleton: true }));
         // Some servers (e.g. test-server.brapi.org) reply 200 with `result: null`
         // for unknown germplasm instead of 404.
         return env.result != null;
@@ -348,7 +371,7 @@ async function rootExists(id, client, connection, ctx) {
     }
 }
 async function fetchPedigree(client, connection, encodedId, ctx) {
-    const env = await client.get(connection.baseUrl, `/germplasm/${encodedId}/pedigree`, ctx, buildRequestOptions(connection));
+    const env = await client.get(connection.baseUrl, `/germplasm/${encodedId}/pedigree`, ctx, buildRequestOptions(connection, undefined, { singleton: true }));
     const rawParents = env.result?.parents;
     if (!Array.isArray(rawParents))
         return [];
@@ -372,7 +395,7 @@ async function fetchPedigree(client, connection, encodedId, ctx) {
     return parents;
 }
 async function fetchProgeny(client, connection, encodedId, ctx) {
-    const env = await client.get(connection.baseUrl, `/germplasm/${encodedId}/progeny`, ctx, buildRequestOptions(connection));
+    const env = await client.get(connection.baseUrl, `/germplasm/${encodedId}/progeny`, ctx, buildRequestOptions(connection, undefined, { singleton: true }));
     const result = env.result;
     const rawProgeny = result?.progeny;
     const fallback = Array.isArray(rawProgeny)