@cyanheads/brapi-mcp-server 0.4.1 → 0.4.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/CLAUDE.md +1 -1
- package/README.md +1 -1
- package/changelog/0.4.x/0.4.2.md +23 -0
- package/dist/mcp-server/tools/definitions/brapi-find-genotype-calls.tool.d.ts +14 -14
- package/dist/mcp-server/tools/definitions/brapi-find-genotype-calls.tool.js +13 -13
- package/dist/mcp-server/tools/definitions/brapi-find-genotype-calls.tool.js.map +1 -1
- package/dist/mcp-server/tools/definitions/brapi-find-images.tool.d.ts +16 -16
- package/dist/mcp-server/tools/definitions/brapi-find-images.tool.d.ts.map +1 -1
- package/dist/mcp-server/tools/definitions/brapi-find-images.tool.js +19 -17
- package/dist/mcp-server/tools/definitions/brapi-find-images.tool.js.map +1 -1
- package/dist/mcp-server/tools/definitions/brapi-find-observations.tool.d.ts +20 -20
- package/dist/mcp-server/tools/definitions/brapi-find-observations.tool.d.ts.map +1 -1
- package/dist/mcp-server/tools/definitions/brapi-find-observations.tool.js +24 -20
- package/dist/mcp-server/tools/definitions/brapi-find-observations.tool.js.map +1 -1
- package/dist/mcp-server/tools/definitions/brapi-find-studies.tool.d.ts.map +1 -1
- package/dist/mcp-server/tools/definitions/brapi-find-studies.tool.js +4 -1
- package/dist/mcp-server/tools/definitions/brapi-find-studies.tool.js.map +1 -1
- package/dist/mcp-server/tools/definitions/brapi-find-variables.tool.js +1 -1
- package/dist/mcp-server/tools/definitions/brapi-find-variables.tool.js.map +1 -1
- package/dist/mcp-server/tools/definitions/brapi-find-variants.tool.d.ts +3 -3
- package/dist/mcp-server/tools/definitions/brapi-find-variants.tool.js +3 -3
- package/dist/mcp-server/tools/definitions/brapi-find-variants.tool.js.map +1 -1
- package/dist/mcp-server/tools/definitions/index.d.ts +53 -53
- package/dist/mcp-server/tools/shared/find-helpers.d.ts +8 -0
- package/dist/mcp-server/tools/shared/find-helpers.d.ts.map +1 -1
- package/dist/mcp-server/tools/shared/find-helpers.js +14 -0
- package/dist/mcp-server/tools/shared/find-helpers.js.map +1 -1
- package/dist/services/brapi-dialect/cassavabase-dialect.d.ts.map +1 -1
- package/dist/services/brapi-dialect/cassavabase-dialect.js +6 -3
- package/dist/services/brapi-dialect/cassavabase-dialect.js.map +1 -1
- package/package.json +1 -1
- package/server.json +3 -3
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1
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+
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@@ -1 +1 @@
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|
1
|
-
{"version":3,"file":"cassavabase-dialect.d.ts","sourceRoot":"","sources":["../../../src/services/brapi-dialect/cassavabase-dialect.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;GAwBG;AAEH,OAAO,KAAK,EAAE,YAAY,EAAqB,MAAM,YAAY,CAAC;
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1
|
+
{"version":3,"file":"cassavabase-dialect.d.ts","sourceRoot":"","sources":["../../../src/services/brapi-dialect/cassavabase-dialect.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;GAwBG;AAEH,OAAO,KAAK,EAAE,YAAY,EAAqB,MAAM,YAAY,CAAC;AA6IlE,eAAO,MAAM,kBAAkB,EAAE,YAqChC,CAAC"}
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@@ -43,7 +43,6 @@ const PLURAL_TO_SINGULAR = {
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|
43
43
|
programNames: 'programName',
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44
44
|
trialDbIds: 'trialDbId', // observed: works
|
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45
45
|
trialNames: 'trialName',
|
|
46
|
-
locationDbIds: 'locationDbId',
|
|
47
46
|
locationNames: 'locationName',
|
|
48
47
|
seasonDbIds: 'seasonDbId', // observed: works
|
|
49
48
|
studyDbIds: 'studyDbId',
|
|
@@ -123,10 +122,14 @@ const PLURAL_TO_SINGULAR = {
|
|
|
123
122
|
* Filters CassavaBase silently ignores entirely — drop them from the wire and
|
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124
123
|
* surface a warning so the agent stops trusting the response as if the filter
|
|
125
124
|
* were honored. `searchText` is a non-spec extension we invented earlier;
|
|
126
|
-
* no SGN-family server recognizes it.
|
|
125
|
+
* no SGN-family server recognizes it. `locationDbIds` (and the singular
|
|
126
|
+
* `locationDbId`) on `/studies` was empirically verified to leak: requesting
|
|
127
|
+
* `locationDbId=3` still returned studies for other locations (Mokwa, Zaria).
|
|
128
|
+
* Until we have a working alternative, narrow location-wise post-fetch via
|
|
129
|
+
* `locationName` distribution or a follow-up `brapi_get_study` call.
|
|
127
130
|
*/
|
|
128
131
|
const DROPPED_FILTERS = {
|
|
129
|
-
studies: new Set(['searchText']),
|
|
132
|
+
studies: new Set(['searchText', 'locationDbIds', 'locationDbId']),
|
|
130
133
|
germplasm: new Set(['searchText']),
|
|
131
134
|
};
|
|
132
135
|
const EMPTY_DROP_SET = new Set();
|
|
@@ -1 +1 @@
|
|
|
1
|
-
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|
package/package.json
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@cyanheads/brapi-mcp-server",
|
|
3
3
|
"mcpName": "io.github.cyanheads/brapi-mcp-server",
|
|
4
|
-
"version": "0.4.
|
|
4
|
+
"version": "0.4.2",
|
|
5
5
|
"description": "BrAPI v2.1 MCP server — studies, germplasm, observations, genotypes, images, and pedigrees.",
|
|
6
6
|
"author": "Casey Hand @cyanheads (https://github.com/cyanheads/brapi-mcp-server#readme)",
|
|
7
7
|
"type": "module",
|
package/server.json
CHANGED
|
@@ -6,14 +6,14 @@
|
|
|
6
6
|
"url": "https://github.com/cyanheads/brapi-mcp-server",
|
|
7
7
|
"source": "github"
|
|
8
8
|
},
|
|
9
|
-
"version": "0.4.
|
|
9
|
+
"version": "0.4.2",
|
|
10
10
|
"packages": [
|
|
11
11
|
{
|
|
12
12
|
"registryType": "npm",
|
|
13
13
|
"registryBaseUrl": "https://registry.npmjs.org",
|
|
14
14
|
"identifier": "@cyanheads/brapi-mcp-server",
|
|
15
15
|
"runtimeHint": "bun",
|
|
16
|
-
"version": "0.4.
|
|
16
|
+
"version": "0.4.2",
|
|
17
17
|
"packageArguments": [
|
|
18
18
|
{ "type": "positional", "value": "run" },
|
|
19
19
|
{ "type": "positional", "value": "start:stdio" }
|
|
@@ -49,7 +49,7 @@
|
|
|
49
49
|
"registryBaseUrl": "https://registry.npmjs.org",
|
|
50
50
|
"identifier": "@cyanheads/brapi-mcp-server",
|
|
51
51
|
"runtimeHint": "bun",
|
|
52
|
-
"version": "0.4.
|
|
52
|
+
"version": "0.4.2",
|
|
53
53
|
"packageArguments": [
|
|
54
54
|
{ "type": "positional", "value": "run" },
|
|
55
55
|
{ "type": "positional", "value": "start:http" }
|