@cosyte/synth 0.1.6 → 0.1.8

package/dist/deid/index.mjs

@@ -501,7 +501,9 @@ function mshScaffold(rng, type) {
     controlId,
     timestamp,
     version: "2.5",
-    processingId: "P"
+    // MSH-11 processing ID `T` (HL7 table 0103: training), never `P` (production): every message
+    // says it is test data in the field the standard gives for it.
+    processingId: "T"
   });
   return { message, timestamp, controlId };
 }
@@ -971,8 +973,18 @@ function narrative(text) {
     prop("div", str(`<div xmlns="http://www.w3.org/1999/xhtml"><p>${escaped}</p></div>`))
   ]);
 }
+var TEST_DATA_LABEL = Object.freeze({
+  system: "http://terminology.hl7.org/CodeSystem/v3-ActReason",
+  code: "HTEST",
+  display: "test health data"
+});
 function meta(profiles) {
-  return fhirPeer().complex([prop("profile", fhirPeer().list(profiles.map((p) => str(p))))]);
+  const props = [];
+  if (profiles.length > 0) {
+    props.push(prop("profile", fhirPeer().list(profiles.map((p) => str(p)))));
+  }
+  props.push(prop("security", fhirPeer().list([coding(TEST_DATA_LABEL)])));
+  return fhirPeer().complex(props);
 }
 function toFhirDate(ymd) {
   return `${ymd.slice(0, 4)}-${ymd.slice(4, 6)}-${ymd.slice(6, 8)}`;
@@ -1304,7 +1316,7 @@ function generatePatient(options = {}) {
     prop("resourceType", str("Patient")),
     prop("id", str(`syn-patient-${id.id}`))
   ];
-  if (usCore) props.push(prop("meta", meta([US_CORE_PROFILE.PATIENT])));
+  props.push(prop("meta", meta(usCore ? [US_CORE_PROFILE.PATIENT] : [])));
   props.push(
     prop(
       "text",
@@ -1386,7 +1398,7 @@ function generateCondition(options = {}) {
     prop("resourceType", str("Condition")),
     prop("id", str(`syn-cond-${rng.digits(8)}`))
   ];
-  if (usCore) props.push(prop("meta", meta([US_CORE_PROFILE.CONDITION])));
+  props.push(prop("meta", meta(usCore ? [US_CORE_PROFILE.CONDITION] : [])));
   props.push(prop("text", narrative(`Synthetic condition: ${code.display}.`)));
   props.push(
     prop(
@@ -1442,7 +1454,7 @@ function buildObservation(seed, subject, usCore, profileUrl, category, pool, eff
     prop("resourceType", str("Observation")),
     prop("id", str(`syn-obs-${rng.digits(8)}`))
   ];
-  if (usCore) props.push(prop("meta", meta([profileUrl])));
+  props.push(prop("meta", meta(usCore ? [profileUrl] : [])));
   props.push(
     prop("text", narrative(`Synthetic ${category.display.toLowerCase()}: ${concept.display}.`))
   );
@@ -1510,7 +1522,7 @@ function generateMedicationRequest(options = {}) {
     prop("resourceType", str("MedicationRequest")),
     prop("id", str(`syn-medreq-${rng.digits(8)}`))
   ];
-  if (usCore) props.push(prop("meta", meta([US_CORE_PROFILE.MEDICATION_REQUEST])));
+  props.push(prop("meta", meta(usCore ? [US_CORE_PROFILE.MEDICATION_REQUEST] : [])));
   props.push(prop("text", narrative(`Synthetic medication order: ${med.display}.`)));
   props.push(prop("status", str("active")));
   props.push(prop("intent", str("order")));
@@ -1533,7 +1545,7 @@ function generateEncounter(options = {}) {
     prop("resourceType", str("Encounter")),
     prop("id", str(`syn-enc-${rng.digits(8)}`))
   ];
-  if (usCore) props.push(prop("meta", meta([US_CORE_PROFILE.ENCOUNTER])));
+  props.push(prop("meta", meta(usCore ? [US_CORE_PROFILE.ENCOUNTER] : [])));
   props.push(prop("text", narrative(`Synthetic encounter: ${type.display}.`)));
   props.push(
     prop(
@@ -1564,7 +1576,7 @@ function generateImmunization(options = {}) {
     prop("resourceType", str("Immunization")),
     prop("id", str(`syn-imm-${rng.digits(8)}`))
   ];
-  if (usCore) props.push(prop("meta", meta([US_CORE_PROFILE.IMMUNIZATION])));
+  props.push(prop("meta", meta(usCore ? [US_CORE_PROFILE.IMMUNIZATION] : [])));
   props.push(prop("text", narrative(`Synthetic immunization: ${vaccine.display}.`)));
   props.push(prop("status", str("completed")));
   props.push(prop("vaccineCode", codeableConcept(vaccine)));
@@ -1584,7 +1596,7 @@ function generateAllergyIntolerance(options = {}) {
     prop("resourceType", str("AllergyIntolerance")),
     prop("id", str(`syn-allergy-${rng.digits(8)}`))
   ];
-  if (usCore) props.push(prop("meta", meta([US_CORE_PROFILE.ALLERGY_INTOLERANCE])));
+  props.push(prop("meta", meta(usCore ? [US_CORE_PROFILE.ALLERGY_INTOLERANCE] : [])));
   props.push(prop("text", narrative(`Synthetic allergy: ${allergen.display}.`)));
   props.push(
     prop(
@@ -1627,7 +1639,7 @@ function generateProcedure(options = {}) {
     prop("resourceType", str("Procedure")),
     prop("id", str(`syn-proc-${rng.digits(8)}`))
   ];
-  if (usCore) props.push(prop("meta", meta([US_CORE_PROFILE.PROCEDURE])));
+  props.push(prop("meta", meta(usCore ? [US_CORE_PROFILE.PROCEDURE] : [])));
   props.push(prop("text", narrative(`Synthetic procedure: ${code.display}.`)));
   props.push(prop("status", str("completed")));
   props.push(prop("code", codeableConcept(code)));
@@ -1646,7 +1658,7 @@ function generateDiagnosticReport(options = {}) {
     prop("resourceType", str("DiagnosticReport")),
     prop("id", str(`syn-dr-${rng.digits(8)}`))
   ];
-  if (usCore) props.push(prop("meta", meta([US_CORE_PROFILE.DIAGNOSTIC_REPORT_LAB])));
+  props.push(prop("meta", meta(usCore ? [US_CORE_PROFILE.DIAGNOSTIC_REPORT_LAB] : [])));
   props.push(prop("text", narrative(`Synthetic laboratory report: ${code.display}.`)));
   props.push(prop("status", str("final")));
   props.push(
@@ -1683,6 +1695,7 @@ function buildComposition(rng, input) {
   const props = [
     prop("resourceType", str("Composition")),
     prop("id", str(`syn-comp-${rng.digits(8)}`)),
+    prop("meta", meta([])),
     prop("text", narrative("Synthetic continuity-of-care document summary.")),
     prop("status", str("final")),
     prop(
@@ -1718,6 +1731,7 @@ function buildOrganization(rng) {
   return fhirPeer().complex([
     prop("resourceType", str("Organization")),
     prop("id", str(`syn-org-${rng.digits(8)}`)),
+    prop("meta", meta([])),
     prop("text", narrative("Synthetic health organization.")),
     prop(
       "identifier",
@@ -1846,7 +1860,8 @@ function generateBundle(options = {}) {
   });
   const props = [
     prop("resourceType", str("Bundle")),
-    prop("id", str(`syn-bundle-${rng.digits(8)}`))
+    prop("id", str(`syn-bundle-${rng.digits(8)}`)),
+    prop("meta", meta([]))
   ];
   if (type === "document") {
     const id = safe.identifier(rng, "AN");
@@ -1951,12 +1966,12 @@ var PROCEDURE_MODIFIERS = Object.freeze(["25", "59", "76", "GT"]);
 var PLACES_OF_SERVICE = Object.freeze(["11", "22", "21", "12", "49"]);
 var DIAGNOSES = Object.freeze(
   [
-    { code: "J20.9", label: "acute bronchitis, unspecified" },
-    { code: "E11.9", label: "type 2 diabetes mellitus without complications" },
+    { code: "J209", label: "acute bronchitis, unspecified" },
+    { code: "E119", label: "type 2 diabetes mellitus without complications" },
     { code: "I10", label: "essential (primary) hypertension" },
-    { code: "M54.5", label: "low back pain" },
-    { code: "R07.9", label: "chest pain, unspecified" },
-    { code: "Z00.00", label: "general adult medical exam without abnormal findings" }
+    { code: "M545", label: "low back pain" },
+    { code: "R079", label: "chest pain, unspecified" },
+    { code: "Z0000", label: "general adult medical exam without abnormal findings" }
   ].map((entry) => Object.freeze(entry))
 );
 var REVENUE_CODES = Object.freeze(
@@ -2364,7 +2379,8 @@ function generate271(options) {
                     serviceTypeCodes: serviceTypes,
                     inPlanNetwork: "Y",
                     monetaryAmount: dec2(money(rng.int(500, 5e3))),
-                    percent: dec2(String(rng.pick([80, 90, 100])))
+                    percent: dec2(rng.pick([".8", ".9", "1"]))
+                    // EB-08 is a decimal fraction
                   }
                 ]
               }
@@ -2515,7 +2531,8 @@ function claimSegment(rng, minimal) {
       field("E1", "03"),
       // 03 = NDC
       field("D7", drug.ndc),
-      field("E7", String(rng.int(30, 90))),
+      field("E7", String(rng.int(30, 90) * 1e3)),
+      // 442-E7 carries three implied decimals
       field("D5", String(rng.pick([30, 60, 90]))),
       field("D8", rng.pick(DAW_CODES))
     ]