@cosyte/cli 0.0.6 → 0.1.1

package/package.json

@@ -1,12 +1,21 @@
 {
   "name": "@cosyte/cli",
-  "version": "0.0.6",
+  "version": "0.1.1",
   "description": "The cosyte CLI: a PHI-safe developer front door over the @cosyte/* healthcare parsers. Parse HL7 v2 / FHIR from a file or stdin to typed JSON, with a documented exit-code contract.",
   "keywords": [
     "cli",
+    "command-line",
     "healthcare",
     "hl7",
+    "hl7v2",
     "fhir",
+    "x12",
+    "ncpdp",
+    "astm",
+    "c-cda",
+    "dicom",
+    "mllp",
+    "mcp",
     "interoperability",
     "typescript"
   ],
@@ -14,7 +23,7 @@
     "cosyte": "./dist/bin/cosyte.mjs",
     "cosyte-mcp": "./dist/bin/cosyte-mcp.mjs"
   },
-  "homepage": "https://github.com/cosyte/cli#readme",
+  "homepage": "https://docs.cosyte.com/cli",
   "bugs": {
     "url": "https://github.com/cosyte/cli/issues"
   },
@@ -26,7 +35,7 @@
   "author": "Cosyte <hello@cosyte.com> (https://cosyte.com)",
   "type": "module",
   "engines": {
-    "node": ">=22.0.0"
+    "node": ">=22.0.0 <26.0.0"
   },
   "main": "./dist/index.cjs",
   "module": "./dist/index.mjs",
@@ -73,7 +82,7 @@
     "@arethetypeswrong/cli": "0.18.4",
     "@changesets/cli": "2.31.0",
     "@cosyte/eslint-config": "^0.0.4",
-    "@cosyte/fhir": "file:vendor/cosyte-fhir-0.0.0.tgz",
+    "@cosyte/fhir": "^0.1.0",
     "@cosyte/prettier-config": "^0.0.2",
     "@cosyte/test-utils": "^0.0.1",
     "@cosyte/tsconfig": "^0.0.2",
@@ -92,17 +101,18 @@
     "vitest": "4.1.4"
   },
   "dependencies": {
-    "@cosyte/hl7": "^0.0.7",
-    "@cosyte/terminology": "^0.0.9"
+    "@cosyte/hl7": "^0.1.0",
+    "@cosyte/terminology": "^0.1.0"
   },
   "optionalDependencies": {
-    "@cosyte/astm": "^0.0.11",
-    "@cosyte/ccda": "^0.0.8",
-    "@cosyte/dicom": "^0.0.8",
-    "@cosyte/mllp": "^0.0.8",
-    "@cosyte/ncpdp": "^0.0.8",
-    "@cosyte/transform": "^0.0.4",
-    "@cosyte/x12": "^0.0.8",
+    "@cosyte/astm": "^0.1.0",
+    "@cosyte/ccda": "^0.1.0",
+    "@cosyte/deid": "^0.1.0",
+    "@cosyte/dicom": "^0.1.0",
+    "@cosyte/mllp": "^0.1.0",
+    "@cosyte/ncpdp": "^0.1.0",
+    "@cosyte/transform": "^0.1.0",
+    "@cosyte/x12": "^0.1.0",
     "@modelcontextprotocol/sdk": "1.29.0"
   },
   "scripts": {
@@ -110,17 +120,22 @@
     "changeset": "changeset",
     "typecheck": "tsc --noEmit",
     "phi-scan": "tsx scripts/phi-scan.ts",
+    "check:agent-notes": "tsx scripts/check-agent-notes.ts",
     "check:no-emdash": "bash scripts/check-no-emdash.sh",
     "check:no-internal-refs": "bash scripts/check-no-internal-refs.sh",
     "lint": "eslint \"src/**/*.ts\" \"scripts/**/*.ts\" \"test/**/*.ts\" --max-warnings=0 --no-error-on-unmatched-pattern",
     "lint:fix": "eslint \"src/**/*.ts\" \"scripts/**/*.ts\" \"test/**/*.ts\" --fix --no-error-on-unmatched-pattern",
-    "format": "prettier --write \"src/**/*.{ts,md}\" \"test/**/*.ts\" \"scripts/**/*.{ts,mjs}\" \"*.{json,md,yml}\"",
-    "format:check": "prettier --check \"src/**/*.{ts,md}\" \"test/**/*.ts\" \"scripts/**/*.{ts,mjs}\" \"*.{json,md,yml}\"",
+    "format": "prettier --write \"src/**/*.{ts,md}\" \"test/**/*.ts\" \"scripts/**/*.{ts,mjs}\" \"examples/**/*.{ts,js,json,md}\" \"*.{json,md,yml}\"",
+    "format:check": "prettier --check \"src/**/*.{ts,md}\" \"test/**/*.ts\" \"scripts/**/*.{ts,mjs}\" \"examples/**/*.{ts,js,json,md}\" \"*.{json,md,yml}\"",
     "test": "vitest run",
     "test:watch": "vitest",
     "test:coverage": "vitest run --coverage",
     "test:fuzz": "vitest run test/fuzz.property.test.ts",
     "smoke": "node scripts/smoke.mjs",
+    "examples": "tsx scripts/run-examples.ts",
+    "typecheck:examples": "tsc -p examples/tsconfig.json",
+    "lint:examples": "eslint examples --max-warnings=0",
+    "phi-scan:examples": "tsx scripts/phi-scan.ts examples/*.ts",
     "clean": "rm -rf dist coverage",
     "vendor:refresh": "bash scripts/vendor-refresh.sh",
     "pack:docs": "bash scripts/build-docs-artifacts.sh",

package/dist/io-B2EobRzC.d.cts

@@ -1,57 +0,0 @@
-import { Readable } from 'node:stream';
-
-/**
- * Input I/O for the CLI: read the bytes to operate on from a **file argument** or from **stdin**
- * (`-`), with a value-free failure mode. The CLI never writes a temp file and never logs to a file;
- * this module only *reads*.
- *
- * The reader functions are injected into the command layer as {@link RunDeps} so the whole dispatch
- * path is testable without touching `process`: the real `process.stdin` wiring lives in the thin
- * `bin` entry.
- *
- * @packageDocumentation
- */
-
-/**
- * The injectable input side-effects the dispatcher needs. Kept tiny and pure-ish so tests drive the
- * CLI end to end with in-memory fakes and no real filesystem or stdin.
- */
-interface RunDeps {
-    /** Read a file's bytes, or raise a `CLI_NO_INPUT` {@link CliError} if it cannot be read. */
-    readonly readFile: (path: string) => Promise<Uint8Array>;
-    /** Read all of stdin's bytes. */
-    readonly readStdin: () => Promise<Uint8Array>;
-}
-/**
- * Read a file into bytes, mapping any read failure to a **value-free** `CLI_NO_INPUT` /
- * {@link EXIT.NOINPUT} error. The path is structural context (the user supplied it), so it may appear
- * in the message; the file *contents* never do.
- *
- * @param path - The file path to read.
- * @returns The file bytes.
- * @throws {CliError} `CLI_NO_INPUT` (exit `66`) when the file is missing, a directory, or unreadable.
- * @example
- * ```ts throws
- * import { readFileBytes } from "@cosyte/cli";
- *
- * await readFileBytes("/no/such/file"); // throws CliError CLI_NO_INPUT
- * ```
- */
-declare function readFileBytes(path: string): Promise<Uint8Array>;
-/**
- * Drain a readable stream (e.g. `process.stdin`) into a single byte buffer.
- *
- * @param stream - The readable stream to drain.
- * @returns The concatenated bytes.
- * @example
- * ```ts
- * import { Readable } from "node:stream";
- * import { readStreamBytes } from "@cosyte/cli";
- *
- * const bytes = await readStreamBytes(Readable.from([Buffer.from("MSH|")]));
- * bytes.length; // => 4
- * ```
- */
-declare function readStreamBytes(stream: Readable): Promise<Uint8Array>;
-
-export { type RunDeps as R, readStreamBytes as a, readFileBytes as r };

package/dist/io-B2EobRzC.d.ts

@@ -1,57 +0,0 @@
-import { Readable } from 'node:stream';
-
-/**
- * Input I/O for the CLI: read the bytes to operate on from a **file argument** or from **stdin**
- * (`-`), with a value-free failure mode. The CLI never writes a temp file and never logs to a file;
- * this module only *reads*.
- *
- * The reader functions are injected into the command layer as {@link RunDeps} so the whole dispatch
- * path is testable without touching `process`: the real `process.stdin` wiring lives in the thin
- * `bin` entry.
- *
- * @packageDocumentation
- */
-
-/**
- * The injectable input side-effects the dispatcher needs. Kept tiny and pure-ish so tests drive the
- * CLI end to end with in-memory fakes and no real filesystem or stdin.
- */
-interface RunDeps {
-    /** Read a file's bytes, or raise a `CLI_NO_INPUT` {@link CliError} if it cannot be read. */
-    readonly readFile: (path: string) => Promise<Uint8Array>;
-    /** Read all of stdin's bytes. */
-    readonly readStdin: () => Promise<Uint8Array>;
-}
-/**
- * Read a file into bytes, mapping any read failure to a **value-free** `CLI_NO_INPUT` /
- * {@link EXIT.NOINPUT} error. The path is structural context (the user supplied it), so it may appear
- * in the message; the file *contents* never do.
- *
- * @param path - The file path to read.
- * @returns The file bytes.
- * @throws {CliError} `CLI_NO_INPUT` (exit `66`) when the file is missing, a directory, or unreadable.
- * @example
- * ```ts throws
- * import { readFileBytes } from "@cosyte/cli";
- *
- * await readFileBytes("/no/such/file"); // throws CliError CLI_NO_INPUT
- * ```
- */
-declare function readFileBytes(path: string): Promise<Uint8Array>;
-/**
- * Drain a readable stream (e.g. `process.stdin`) into a single byte buffer.
- *
- * @param stream - The readable stream to drain.
- * @returns The concatenated bytes.
- * @example
- * ```ts
- * import { Readable } from "node:stream";
- * import { readStreamBytes } from "@cosyte/cli";
- *
- * const bytes = await readStreamBytes(Readable.from([Buffer.from("MSH|")]));
- * bytes.length; // => 4
- * ```
- */
-declare function readStreamBytes(stream: Readable): Promise<Uint8Array>;
-
-export { type RunDeps as R, readStreamBytes as a, readFileBytes as r };