@cornerstonejs/tools 2.0.0-beta.6 → 2.0.0-beta.7

package/dist/esm/tools/segmentation/SphereScissorsTool.js

@@ -1,18 +1,21 @@
-import { cache, getEnabledElement, StackViewport } from '@cornerstonejs/core';
+import { cache, getEnabledElement } from '@cornerstonejs/core';
 import { BaseTool } from '../base';
 import { fillInsideSphere } from './strategies/fillSphere';
-import { Events } from '../../enums';
+import { eraseInsideSphere } from './strategies/eraseSphere';
+import { Events, SegmentationRepresentations } from '../../enums';
 import { drawCircle as drawCircleSvg } from '../../drawingSvg';
 import { resetElementCursor, hideElementCursor, } from '../../cursors/elementCursor';
 import triggerAnnotationRenderForViewportIds from '../../utilities/triggerAnnotationRenderForViewportIds';
 import { config as segmentationConfig, segmentLocking, segmentIndex as segmentIndexController, activeSegmentation, } from '../../stateManagement/segmentation';
 import { getSegmentation } from '../../stateManagement/segmentation/segmentationState';
+import { isVolumeSegmentation } from './strategies/utils/stackVolumeCheck';
 class SphereScissorsTool extends BaseTool {
     constructor(toolProps = {}, defaultToolProps = {
         supportedInteractionTypes: ['Mouse', 'Touch'],
         configuration: {
             strategies: {
                 FILL_INSIDE: fillInsideSphere,
+                ERASE_INSIDE: eraseInsideSphere,
             },
             defaultStrategy: 'FILL_INSIDE',
             activeStrategy: 'FILL_INSIDE',
@@ -20,6 +23,9 @@ class SphereScissorsTool extends BaseTool {
     }) {
         super(toolProps, defaultToolProps);
         this.preMouseDownCallback = (evt) => {
+            if (this.isDrawing === true) {
+                return;
+            }
             const eventDetail = evt.detail;
             const { currentPoints, element } = eventDetail;
             const worldPos = currentPoints.world;
@@ -34,13 +40,10 @@ class SphereScissorsTool extends BaseTool {
             if (!activeSegmentationRepresentation) {
                 throw new Error('No active segmentation detected, create one before using scissors tool');
             }
-            const { segmentationRepresentationUID, segmentationId, type } = activeSegmentationRepresentation;
+            const { segmentationRepresentationUID, segmentationId } = activeSegmentationRepresentation;
             const segmentIndex = segmentIndexController.getActiveSegmentIndex(segmentationId);
             const segmentsLocked = segmentLocking.getLockedSegments(segmentationId);
             const segmentColor = segmentationConfig.color.getColorForSegmentIndex(toolGroupId, segmentationRepresentationUID, segmentIndex);
-            const { representationData } = getSegmentation(segmentationId);
-            const { volumeId } = representationData[type];
-            const segmentation = cache.getVolume(volumeId);
             this.isDrawing = true;
             const annotation = {
                 metadata: {
@@ -64,12 +67,12 @@ class SphereScissorsTool extends BaseTool {
             const viewportIdsToRender = [viewport.id];
             this.editData = {
                 annotation,
-                segmentation,
                 centerCanvas: canvasPos,
+                segmentationRepresentationUID,
                 segmentIndex,
+                segmentationId,
                 segmentsLocked,
                 segmentColor,
-                segmentationId,
                 toolGroupId,
                 viewportIdsToRender,
                 handleIndex: 3,
@@ -77,6 +80,24 @@ class SphereScissorsTool extends BaseTool {
                 newAnnotation: true,
                 hasMoved: false,
             };
+            const { representationData } = getSegmentation(segmentationId);
+            const labelmapData = representationData[SegmentationRepresentations.Labelmap];
+            if (isVolumeSegmentation(labelmapData, viewport)) {
+                const { volumeId } = labelmapData;
+                const segmentation = cache.getVolume(volumeId);
+                this.editData = {
+                    ...this.editData,
+                    volumeId,
+                    referencedVolumeId: segmentation.referencedVolumeId,
+                };
+            }
+            else {
+                const { imageIdReferenceMap } = labelmapData;
+                this.editData = {
+                    ...this.editData,
+                    imageIdReferenceMap,
+                };
+            }
             this._activateDraw(element);
             hideElementCursor(element);
             evt.preventDefault();
@@ -123,7 +144,7 @@ class SphereScissorsTool extends BaseTool {
         this._endCallback = (evt) => {
             const eventDetail = evt.detail;
             const { element } = eventDetail;
-            const { annotation, newAnnotation, hasMoved, segmentation, segmentIndex, segmentsLocked, segmentationId, } = this.editData;
+            const { annotation, newAnnotation, hasMoved, segmentIndex, segmentationRepresentationUID, segmentsLocked, } = this.editData;
             const { data } = annotation;
             const { viewPlaneNormal, viewUp } = annotation.metadata;
             if (newAnnotation && !hasMoved) {
@@ -134,27 +155,24 @@ class SphereScissorsTool extends BaseTool {
             this._deactivateDraw(element);
             resetElementCursor(element);
             const enabledElement = getEnabledElement(element);
-            const { viewport } = enabledElement;
-            this.editData = null;
-            this.isDrawing = false;
-            if (viewport instanceof StackViewport) {
-                throw new Error('Not implemented yet');
-            }
             const operationData = {
+                ...this.editData,
                 points: data.handles.points,
-                volume: segmentation,
                 segmentIndex,
+                segmentationRepresentationUID,
                 segmentsLocked,
-                segmentationId,
                 viewPlaneNormal,
                 viewUp,
             };
+            this.editData = null;
+            this.isDrawing = false;
             this.applyActiveStrategy(enabledElement, operationData);
         };
         this._activateDraw = (element) => {
             element.addEventListener(Events.MOUSE_UP, this._endCallback);
             element.addEventListener(Events.MOUSE_DRAG, this._dragCallback);
             element.addEventListener(Events.MOUSE_CLICK, this._endCallback);
+            element.addEventListener(Events.MOUSE_MOVE, this._dragCallback);
             element.addEventListener(Events.TOUCH_END, this._endCallback);
             element.addEventListener(Events.TOUCH_TAP, this._endCallback);
             element.addEventListener(Events.TOUCH_DRAG, this._dragCallback);
@@ -163,6 +181,7 @@ class SphereScissorsTool extends BaseTool {
             element.removeEventListener(Events.MOUSE_UP, this._endCallback);
             element.removeEventListener(Events.MOUSE_DRAG, this._dragCallback);
             element.removeEventListener(Events.MOUSE_CLICK, this._endCallback);
+            element.removeEventListener(Events.MOUSE_MOVE, this._dragCallback);
             element.removeEventListener(Events.TOUCH_END, this._endCallback);
             element.removeEventListener(Events.TOUCH_DRAG, this._dragCallback);
             element.removeEventListener(Events.TOUCH_TAP, this._endCallback);

package/dist/esm/tools/segmentation/SphereScissorsTool.js.map

@@ -1 +1 @@
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package/dist/esm/tools/segmentation/strategies/BrushStrategy.js

@@ -0,0 +1,134 @@
+import { utilities as csUtils } from '@cornerstonejs/core';
+import { triggerSegmentationDataModified } from '../../../stateManagement/segmentation/triggerSegmentationEvents';
+import compositions from './compositions';
+import { getStrategyData } from './utils/getStrategyData';
+import { StrategyCallbacks } from '../../../enums';
+const { VoxelManager } = csUtils;
+export default class BrushStrategy {
+    static { this.COMPOSITIONS = compositions; }
+    static { this.childFunctions = {
+        [StrategyCallbacks.OnInteractionStart]: addListMethod(StrategyCallbacks.OnInteractionStart, StrategyCallbacks.Initialize),
+        [StrategyCallbacks.OnInteractionEnd]: addListMethod(StrategyCallbacks.OnInteractionEnd, StrategyCallbacks.Initialize),
+        [StrategyCallbacks.Fill]: addListMethod(StrategyCallbacks.Fill),
+        [StrategyCallbacks.Initialize]: addListMethod(StrategyCallbacks.Initialize),
+        [StrategyCallbacks.CreateIsInThreshold]: addSingletonMethod(StrategyCallbacks.CreateIsInThreshold),
+        [StrategyCallbacks.AcceptPreview]: addListMethod(StrategyCallbacks.AcceptPreview, StrategyCallbacks.Initialize),
+        [StrategyCallbacks.RejectPreview]: addListMethod(StrategyCallbacks.RejectPreview, StrategyCallbacks.Initialize),
+        [StrategyCallbacks.INTERNAL_setValue]: addSingletonMethod(StrategyCallbacks.INTERNAL_setValue),
+        [StrategyCallbacks.Preview]: addSingletonMethod(StrategyCallbacks.Preview, false),
+        [StrategyCallbacks.ComputeInnerCircleRadius]: addListMethod(StrategyCallbacks.ComputeInnerCircleRadius),
+        compositions: null,
+    }; }
+    constructor(name, ...initializers) {
+        this._initialize = [];
+        this._fill = [];
+        this._onInteractionStart = [];
+        this.fill = (enabledElement, operationData) => {
+            const initializedData = this.initialize(enabledElement, operationData, StrategyCallbacks.Fill);
+            if (!initializedData) {
+                return;
+            }
+            const { strategySpecificConfiguration = {}, centerIJK } = initializedData;
+            if (csUtils.isEqual(centerIJK, strategySpecificConfiguration.centerIJK)) {
+                return operationData.preview;
+            }
+            else {
+                strategySpecificConfiguration.centerIJK = centerIJK;
+            }
+            this._fill.forEach((func) => func(initializedData));
+            const { segmentationVoxelManager, previewVoxelManager, previewSegmentIndex, } = initializedData;
+            triggerSegmentationDataModified(initializedData.segmentationId, segmentationVoxelManager.getArrayOfSlices());
+            if (!previewSegmentIndex || !previewVoxelManager.modifiedSlices.size) {
+                return null;
+            }
+            return initializedData.preview || initializedData;
+        };
+        this.onInteractionStart = (enabledElement, operationData) => {
+            const { preview } = operationData;
+            if (preview?.isPreviewFromHover) {
+                preview.isPreviewFromHover = false;
+                return;
+            }
+            const initializedData = this.initialize(enabledElement, operationData);
+            if (!initializedData) {
+                return;
+            }
+            this._onInteractionStart.forEach((func) => func.call(this, initializedData));
+        };
+        this.configurationName = name;
+        this.compositions = initializers;
+        initializers.forEach((initializer) => {
+            const result = typeof initializer === 'function' ? initializer() : initializer;
+            if (!result) {
+                return;
+            }
+            for (const key in result) {
+                if (!BrushStrategy.childFunctions[key]) {
+                    throw new Error(`Didn't find ${key} as a brush strategy`);
+                }
+                BrushStrategy.childFunctions[key](this, result[key]);
+            }
+        });
+        this.strategyFunction = (enabledElement, operationData) => this.fill(enabledElement, operationData);
+        for (const key of Object.keys(BrushStrategy.childFunctions)) {
+            this.strategyFunction[key] = this[key];
+        }
+    }
+    initialize(enabledElement, operationData, operationName) {
+        const { viewport } = enabledElement;
+        const data = getStrategyData({ operationData, viewport });
+        if (!data) {
+            console.warn('No data found for BrushStrategy');
+            return operationData.preview;
+        }
+        const { imageVoxelManager, segmentationVoxelManager, segmentationImageData, } = data;
+        const previewVoxelManager = operationData.preview?.previewVoxelManager ||
+            VoxelManager.createHistoryVoxelManager(segmentationVoxelManager);
+        const previewEnabled = !!operationData.previewColors;
+        const previewSegmentIndex = previewEnabled ? 255 : undefined;
+        const initializedData = {
+            operationName,
+            previewSegmentIndex,
+            ...operationData,
+            enabledElement,
+            imageVoxelManager,
+            segmentationVoxelManager,
+            segmentationImageData,
+            previewVoxelManager,
+            viewport,
+            centerWorld: null,
+            brushStrategy: this,
+        };
+        this._initialize.forEach((func) => func(initializedData));
+        return initializedData;
+    }
+}
+function addListMethod(name, createInitialized) {
+    const listName = `_${name}`;
+    return (brushStrategy, func) => {
+        brushStrategy[listName] ||= [];
+        brushStrategy[listName].push(func);
+        brushStrategy[name] ||= createInitialized
+            ? (enabledElement, operationData) => {
+                const initializedData = brushStrategy[createInitialized](enabledElement, operationData, name);
+                brushStrategy[listName].forEach((func) => func.call(brushStrategy, initializedData));
+            }
+            : (operationData) => {
+                brushStrategy[listName].forEach((func) => func.call(brushStrategy, operationData));
+            };
+    };
+}
+function addSingletonMethod(name, isInitialized = true) {
+    return (brushStrategy, func) => {
+        if (brushStrategy[name]) {
+            throw new Error(`The singleton method ${name} already exists`);
+        }
+        brushStrategy[name] = isInitialized
+            ? func
+            : (enabledElement, operationData) => {
+                operationData.enabledElement = enabledElement;
+                return func.call(brushStrategy, operationData);
+            };
+    };
+}
+//# sourceMappingURL=BrushStrategy.js.map

package/dist/esm/tools/segmentation/strategies/BrushStrategy.js.map

@@ -0,0 +1 @@
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package/dist/esm/tools/segmentation/strategies/compositions/determineSegmentIndex.js

@@ -0,0 +1,48 @@
+import pointInShapeCallback from '../../../../utilities/pointInShapeCallback';
+import StrategyCallbacks from '../../../../enums/StrategyCallbacks';
+export default {
+    [StrategyCallbacks.Initialize]: (operationData) => {
+        const { strategySpecificConfiguration } = operationData;
+        if (!strategySpecificConfiguration) {
+            return;
+        }
+        const { centerSegmentIndex } = strategySpecificConfiguration;
+        if (centerSegmentIndex) {
+            operationData.segmentIndex = centerSegmentIndex.segmentIndex;
+        }
+    },
+    [StrategyCallbacks.OnInteractionStart]: (operationData) => {
+        const { segmentIndex, previewSegmentIndex, segmentationVoxelManager: segmentationVoxelManager, centerIJK, strategySpecificConfiguration, imageVoxelManager: imageVoxelManager, segmentationImageData, preview, } = operationData;
+        if (!strategySpecificConfiguration?.useCenterSegmentIndex) {
+            return;
+        }
+        delete strategySpecificConfiguration.centerSegmentIndex;
+        let hasSegmentIndex = false;
+        let hasPreviewIndex = false;
+        const callback = ({ value }) => {
+            hasSegmentIndex ||= value === segmentIndex;
+            hasPreviewIndex ||= value === previewSegmentIndex;
+        };
+        pointInShapeCallback(segmentationImageData, imageVoxelManager.isInObject, callback, segmentationVoxelManager.boundsIJK);
+        if (!hasSegmentIndex && !hasPreviewIndex) {
+            return;
+        }
+        let existingValue = segmentationVoxelManager.getAtIJKPoint(centerIJK);
+        if (existingValue === previewSegmentIndex) {
+            if (preview) {
+                existingValue = preview.segmentIndex;
+            }
+            else {
+                return;
+            }
+        }
+        else if (hasPreviewIndex) {
+            existingValue = null;
+        }
+        operationData.segmentIndex = existingValue;
+        strategySpecificConfiguration.centerSegmentIndex = {
+            segmentIndex: existingValue,
+        };
+    },
+};
+//# sourceMappingURL=determineSegmentIndex.js.map

package/dist/esm/tools/segmentation/strategies/compositions/determineSegmentIndex.js.map

@@ -0,0 +1 @@
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package/dist/esm/tools/segmentation/strategies/compositions/dynamicThreshold.js

@@ -0,0 +1,64 @@
+import { vec3 } from 'gl-matrix';
+import StrategyCallbacks from '../../../../enums/StrategyCallbacks';
+export default {
+    [StrategyCallbacks.Initialize]: (operationData) => {
+        const { operationName, centerIJK, strategySpecificConfiguration, segmentationVoxelManager: segmentationVoxelManager, imageVoxelManager: imageVoxelManager, segmentIndex, } = operationData;
+        const { THRESHOLD } = strategySpecificConfiguration;
+        if (!THRESHOLD?.isDynamic || !centerIJK || !segmentIndex) {
+            return;
+        }
+        if (operationName === StrategyCallbacks.RejectPreview ||
+            operationName === StrategyCallbacks.OnInteractionEnd) {
+            return;
+        }
+        const { boundsIJK } = segmentationVoxelManager;
+        const { threshold: oldThreshold, dynamicRadius = 0 } = THRESHOLD;
+        const useDelta = oldThreshold ? 0 : dynamicRadius;
+        const nestedBounds = boundsIJK.map((ijk, idx) => {
+            const [min, max] = ijk;
+            return [
+                Math.max(min, centerIJK[idx] - useDelta),
+                Math.min(max, centerIJK[idx] + useDelta),
+            ];
+        });
+        const threshold = oldThreshold || [Infinity, -Infinity];
+        const callback = ({ value }) => {
+            const gray = Array.isArray(value) ? vec3.len(value) : value;
+            threshold[0] = Math.min(gray, threshold[0]);
+            threshold[1] = Math.max(gray, threshold[1]);
+        };
+        imageVoxelManager.forEach(callback, { boundsIJK: nestedBounds });
+        operationData.strategySpecificConfiguration.THRESHOLD.threshold = threshold;
+    },
+    [StrategyCallbacks.OnInteractionStart]: (operationData) => {
+        const { strategySpecificConfiguration, preview } = operationData;
+        if (!strategySpecificConfiguration?.THRESHOLD?.isDynamic && !preview) {
+            return;
+        }
+        strategySpecificConfiguration.THRESHOLD.threshold = null;
+    },
+    [StrategyCallbacks.ComputeInnerCircleRadius]: (operationData) => {
+        const { configuration, viewport } = operationData;
+        const { THRESHOLD: { dynamicRadius = 0 } = {} } = configuration.strategySpecificConfiguration || {};
+        if (dynamicRadius === 0) {
+            return;
+        }
+        const { spacing } = viewport.getImageData();
+        const centerCanvas = [
+            viewport.element.clientWidth / 2,
+            viewport.element.clientHeight / 2,
+        ];
+        const radiusInWorld = dynamicRadius * spacing[0];
+        const centerCursorInWorld = viewport.canvasToWorld(centerCanvas);
+        const offSetCenterInWorld = centerCursorInWorld.map((coord) => coord + radiusInWorld);
+        const offSetCenterCanvas = viewport.worldToCanvas(offSetCenterInWorld);
+        const dynamicRadiusInCanvas = Math.abs(centerCanvas[0] - offSetCenterCanvas[0]);
+        const { strategySpecificConfiguration, activeStrategy } = configuration;
+        if (!strategySpecificConfiguration[activeStrategy]) {
+            strategySpecificConfiguration[activeStrategy] = {};
+        }
+        strategySpecificConfiguration[activeStrategy].dynamicRadiusInCanvas =
+            dynamicRadiusInCanvas;
+    },
+};
+//# sourceMappingURL=dynamicThreshold.js.map

package/dist/esm/tools/segmentation/strategies/compositions/dynamicThreshold.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"dynamicThreshold.js","sourceRoot":"","sources":["../../../../../../src/tools/segmentation/strategies/compositions/dynamicThreshold.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AAIjC,OAAO,iBAAiB,MAAM,qCAAqC,CAAC;AAUpE,eAAe;IACb,CAAC,iBAAiB,CAAC,UAAU,CAAC,EAAE,CAAC,aAAuC,EAAE,EAAE;QAC1E,MAAM,EACJ,aAAa,EACb,SAAS,EACT,6BAA6B,EAC7B,wBAAwB,EAAE,wBAAwB,EAClD,iBAAiB,EAAE,iBAAiB,EACpC,YAAY,GACb,GAAG,aAAa,CAAC;QAClB,MAAM,EAAE,SAAS,EAAE,GAAG,6BAA6B,CAAC;QAEpD,IAAI,CAAC,SAAS,EAAE,SAAS,IAAI,CAAC,SAAS,IAAI,CAAC,YAAY,EAAE;YACxD,OAAO;SACR;QACD,IACE,aAAa,KAAK,iBAAiB,CAAC,aAAa;YACjD,aAAa,KAAK,iBAAiB,CAAC,gBAAgB,EACpD;YACA,OAAO;SACR;QAED,MAAM,EAAE,SAAS,EAAE,GAAG,wBAAwB,CAAC;QAC/C,MAAM,EAAE,SAAS,EAAE,YAAY,EAAE,aAAa,GAAG,CAAC,EAAE,GAAG,SAAS,CAAC;QACjE,MAAM,QAAQ,GAAG,YAAY,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,aAAa,CAAC;QAClD,MAAM,YAAY,GAAG,SAAS,CAAC,GAAG,CAAC,CAAC,GAAG,EAAE,GAAG,EAAE,EAAE;YAC9C,MAAM,CAAC,GAAG,EAAE,GAAG,CAAC,GAAG,GAAG,CAAC;YACvB,OAAO;gBACL,IAAI,CAAC,GAAG,CAAC,GAAG,EAAE,SAAS,CAAC,GAAG,CAAC,GAAG,QAAQ,CAAC;gBACxC,IAAI,CAAC,GAAG,CAAC,GAAG,EAAE,SAAS,CAAC,GAAG,CAAC,GAAG,QAAQ,CAAC;aACzC,CAAC;QACJ,CAAC,CAAc,CAAC;QAEhB,MAAM,SAAS,GAAG,YAAY,IAAI,CAAC,QAAQ,EAAE,CAAC,QAAQ,CAAC,CAAC;QAExD,MAAM,QAAQ,GAAG,CAAC,EAAE,KAAK,EAAE,EAAE,EAAE;YAC7B,MAAM,IAAI,GAAG,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,KAAY,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;YACnE,SAAS,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,GAAG,CAAC,IAAI,EAAE,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC;YAC5C,SAAS,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,GAAG,CAAC,IAAI,EAAE,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC;QAC9C,CAAC,CAAC;QACF,iBAAiB,CAAC,OAAO,CAAC,QAAQ,EAAE,EAAE,SAAS,EAAE,YAAY,EAAE,CAAC,CAAC;QAEjE,aAAa,CAAC,6BAA6B,CAAC,SAAS,CAAC,SAAS,GAAG,SAAS,CAAC;IAC9E,CAAC;IAED,CAAC,iBAAiB,CAAC,kBAAkB,CAAC,EAAE,CACtC,aAAuC,EACvC,EAAE;QACF,MAAM,EAAE,6BAA6B,EAAE,OAAO,EAAE,GAAG,aAAa,CAAC;QACjE,IAAI,CAAC,6BAA6B,EAAE,SAAS,EAAE,SAAS,IAAI,CAAC,OAAO,EAAE;YACpE,OAAO;SACR;QACD,6BAA6B,CAAC,SAAS,CAAC,SAAS,GAAG,IAAI,CAAC;IAC3D,CAAC;IAMD,CAAC,iBAAiB,CAAC,wBAAwB,CAAC,EAAE,CAC5C,aAAuC,EACvC,EAAE;QACF,MAAM,EAAE,aAAa,EAAE,QAAQ,EAAE,GAAG,aAAa,CAAC;QAClD,MAAM,EAAE,SAAS,EAAE,EAAE,aAAa,GAAG,CAAC,EAAE,GAAG,EAAE,EAAE,GAC7C,aAAa,CAAC,6BAA6B,IAAI,EAAE,CAAC;QAEpD,IAAI,aAAa,KAAK,CAAC,EAAE;YACvB,OAAO;SACR;QAED,MAAM,EAAE,OAAO,EAAE,GACf,QACD,CAAC,YAAY,EAAE,CAAC;QAEjB,MAAM,YAAY,GAAG;YACnB,QAAQ,CAAC,OAAO,CAAC,WAAW,GAAG,CAAC;YAChC,QAAQ,CAAC,OAAO,CAAC,YAAY,GAAG,CAAC;SAClB,CAAC;QAClB,MAAM,aAAa,GAAG,aAAa,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;QACjD,MAAM,mBAAmB,GAAG,QAAQ,CAAC,aAAa,CAAC,YAAY,CAAC,CAAC;QAEjE,MAAM,mBAAmB,GAAG,mBAAmB,CAAC,GAAG,CACjD,CAAC,KAAK,EAAE,EAAE,CAAC,KAAK,GAAG,aAAa,CACjB,CAAC;QAElB,MAAM,kBAAkB,GAAG,QAAQ,CAAC,aAAa,CAAC,mBAAmB,CAAC,CAAC;QACvE,MAAM,qBAAqB,GAAG,IAAI,CAAC,GAAG,CACpC,YAAY,CAAC,CAAC,CAAC,GAAG,kBAAkB,CAAC,CAAC,CAAC,CACxC,CAAC;QAKF,MAAM,EAAE,6BAA6B,EAAE,cAAc,EAAE,GAAG,aAAa,CAAC;QAExE,IAAI,CAAC,6BAA6B,CAAC,cAAc,CAAC,EAAE;YAClD,6BAA6B,CAAC,cAAc,CAAC,GAAG,EAAE,CAAC;SACpD;QAED,6BAA6B,CAAC,cAAc,CAAC,CAAC,qBAAqB;YACjE,qBAAqB,CAAC;IAC1B,CAAC;CACF,CAAC"}

package/dist/esm/tools/segmentation/strategies/compositions/erase.js

@@ -0,0 +1,7 @@
+import StrategyCallbacks from '../../../../enums/StrategyCallbacks';
+export default {
+    [StrategyCallbacks.Initialize]: (operationData) => {
+        operationData.segmentIndex = 0;
+    },
+};
+//# sourceMappingURL=erase.js.map

package/dist/esm/tools/segmentation/strategies/compositions/erase.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"erase.js","sourceRoot":"","sources":["../../../../../../src/tools/segmentation/strategies/compositions/erase.ts"],"names":[],"mappings":"AACA,OAAO,iBAAiB,MAAM,qCAAqC,CAAC;AAKpE,eAAe;IACb,CAAC,iBAAiB,CAAC,UAAU,CAAC,EAAE,CAAC,aAAuC,EAAE,EAAE;QAC1E,aAAa,CAAC,YAAY,GAAG,CAAC,CAAC;IACjC,CAAC;CACF,CAAC"}

package/dist/esm/tools/segmentation/strategies/compositions/index.js

@@ -0,0 +1,19 @@
+import determineSegmentIndex from './determineSegmentIndex';
+import dynamicThreshold from './dynamicThreshold';
+import erase from './erase';
+import islandRemoval from './islandRemoval';
+import preview from './preview';
+import regionFill from './regionFill';
+import setValue from './setValue';
+import threshold from './threshold';
+export default {
+    determineSegmentIndex,
+    dynamicThreshold,
+    erase,
+    islandRemoval,
+    preview,
+    regionFill,
+    setValue,
+    threshold,
+};
+//# sourceMappingURL=index.js.map

package/dist/esm/tools/segmentation/strategies/compositions/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../../../src/tools/segmentation/strategies/compositions/index.ts"],"names":[],"mappings":"AAAA,OAAO,qBAAqB,MAAM,yBAAyB,CAAC;AAC5D,OAAO,gBAAgB,MAAM,oBAAoB,CAAC;AAClD,OAAO,KAAK,MAAM,SAAS,CAAC;AAC5B,OAAO,aAAa,MAAM,iBAAiB,CAAC;AAC5C,OAAO,OAAO,MAAM,WAAW,CAAC;AAChC,OAAO,UAAU,MAAM,cAAc,CAAC;AACtC,OAAO,QAAQ,MAAM,YAAY,CAAC;AAClC,OAAO,SAAS,MAAM,aAAa,CAAC;AAEpC,eAAe;IACb,qBAAqB;IACrB,gBAAgB;IAChB,KAAK;IACL,aAAa;IACb,OAAO;IACP,UAAU;IACV,QAAQ;IACR,SAAS;CACV,CAAC"}

package/dist/esm/tools/segmentation/strategies/compositions/islandRemoval.js

@@ -0,0 +1,124 @@
+import floodFill from '../../../../utilities/segmentation/floodFill';
+import { triggerSegmentationDataModified } from '../../../../stateManagement/segmentation/triggerSegmentationEvents';
+import StrategyCallbacks from '../../../../enums/StrategyCallbacks';
+export default {
+    [StrategyCallbacks.OnInteractionEnd]: (operationData) => {
+        const { previewVoxelManager: previewVoxelManager, segmentationVoxelManager: segmentationVoxelManager, strategySpecificConfiguration, previewSegmentIndex, segmentIndex, } = operationData;
+        if (!strategySpecificConfiguration.THRESHOLD || segmentIndex === null) {
+            return;
+        }
+        const clickedPoints = previewVoxelManager.getPoints();
+        if (!clickedPoints?.length) {
+            return;
+        }
+        if (previewSegmentIndex === undefined) {
+            return;
+        }
+        const boundsIJK = previewVoxelManager
+            .getBoundsIJK()
+            .map((bound, i) => [
+            Math.min(bound[0], ...clickedPoints.map((point) => point[i])),
+            Math.max(bound[1], ...clickedPoints.map((point) => point[i])),
+        ]);
+        if (boundsIJK.find((it) => it[0] < 0 || it[1] > 65535)) {
+            return;
+        }
+        const floodedSet = new Set();
+        const getter = (i, j, k) => {
+            if (i < boundsIJK[0][0] ||
+                i > boundsIJK[0][1] ||
+                j < boundsIJK[1][0] ||
+                j > boundsIJK[1][1] ||
+                k < boundsIJK[2][0] ||
+                k > boundsIJK[2][1]) {
+                return -1;
+            }
+            const index = segmentationVoxelManager.toIndex([i, j, k]);
+            if (floodedSet.has(index)) {
+                return -2;
+            }
+            const oldVal = segmentationVoxelManager.getAtIndex(index);
+            const isIn = oldVal === previewSegmentIndex || oldVal === segmentIndex ? 1 : 0;
+            if (!isIn) {
+                segmentationVoxelManager.addPoint(index);
+            }
+            return isIn;
+        };
+        let floodedCount = 0;
+        const onFlood = (i, j, k) => {
+            const index = segmentationVoxelManager.toIndex([i, j, k]);
+            if (floodedSet.has(index)) {
+                return;
+            }
+            previewVoxelManager.setAtIJK(i, j, k, previewSegmentIndex);
+            floodedSet.add(index);
+            floodedCount++;
+        };
+        clickedPoints.forEach((clickedPoint) => {
+            if (getter(...clickedPoint) === 1) {
+                floodFill(getter, clickedPoint, {
+                    onFlood,
+                    diagonals: true,
+                });
+            }
+        });
+        let clearedCount = 0;
+        let previewCount = 0;
+        const callback = ({ index, pointIJK, value: trackValue }) => {
+            const value = segmentationVoxelManager.getAtIndex(index);
+            if (floodedSet.has(index)) {
+                previewCount++;
+                const newValue = trackValue === segmentIndex ? segmentIndex : previewSegmentIndex;
+                previewVoxelManager.setAtIJKPoint(pointIJK, newValue);
+            }
+            else if (value === previewSegmentIndex) {
+                clearedCount++;
+                const newValue = trackValue ?? 0;
+                previewVoxelManager.setAtIJKPoint(pointIJK, newValue);
+            }
+        };
+        previewVoxelManager.forEach(callback, {});
+        if (floodedCount - previewCount !== 0) {
+            console.warn('There were flooded=', floodedCount, 'cleared=', clearedCount, 'preview count=', previewCount, 'not handled', floodedCount - previewCount);
+        }
+        const islandMap = new Set(segmentationVoxelManager.points || []);
+        floodedSet.clear();
+        for (const index of islandMap.keys()) {
+            if (floodedSet.has(index)) {
+                continue;
+            }
+            let isInternal = true;
+            const internalSet = new Set();
+            const onFloodInternal = (i, j, k) => {
+                const floodIndex = previewVoxelManager.toIndex([i, j, k]);
+                floodedSet.add(floodIndex);
+                if ((boundsIJK[0][0] !== boundsIJK[0][1] &&
+                    (i === boundsIJK[0][0] || i === boundsIJK[0][1])) ||
+                    (boundsIJK[1][0] !== boundsIJK[1][1] &&
+                        (j === boundsIJK[1][0] || j === boundsIJK[1][1])) ||
+                    (boundsIJK[2][0] !== boundsIJK[2][1] &&
+                        (k === boundsIJK[2][0] || k === boundsIJK[2][1]))) {
+                    isInternal = false;
+                }
+                if (isInternal) {
+                    internalSet.add(floodIndex);
+                }
+            };
+            const pointIJK = previewVoxelManager.toIJK(index);
+            if (getter(...pointIJK) !== 0) {
+                continue;
+            }
+            floodFill(getter, pointIJK, {
+                onFlood: onFloodInternal,
+                diagonals: false,
+            });
+            if (isInternal) {
+                for (const index of internalSet) {
+                    previewVoxelManager.setAtIndex(index, previewSegmentIndex);
+                }
+            }
+        }
+        triggerSegmentationDataModified(operationData.segmentationId, previewVoxelManager.getArrayOfSlices());
+    },
+};
+//# sourceMappingURL=islandRemoval.js.map

package/dist/esm/tools/segmentation/strategies/compositions/islandRemoval.js.map

@@ -0,0 +1 @@
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