@cornerstonejs/tools 1.81.3 → 1.81.5

package/dist/cjs/tools/annotation/PlanarFreehandROITool.d.ts

@@ -37,6 +37,25 @@ declare class PlanarFreehandROITool extends ContourSegmentationBaseTool {
     protected renderAnnotationInstance(renderContext: AnnotationRenderContext): boolean;
     _calculateStatsIfActive(annotation: PlanarFreehandROIAnnotation, targetId: string, viewport: any, renderingEngine: any, enabledElement: any): void;
     private _calculateCachedStats;
+    protected updateClosedCachedStats({ viewport, points, imageData, metadata, cachedStats, targetId, modalityUnit, canvasCoordinates, calibratedScale, }: {
+        viewport: any;
+        points: any;
+        imageData: any;
+        metadata: any;
+        cachedStats: any;
+        targetId: any;
+        modalityUnit: any;
+        canvasCoordinates: any;
+        calibratedScale: any;
+    }): void;
+    protected updateOpenCachedStats({ targetId, metadata, canvasCoordinates, cachedStats, modalityUnit, calibratedScale, }: {
+        targetId: any;
+        metadata: any;
+        canvasCoordinates: any;
+        cachedStats: any;
+        modalityUnit: any;
+        calibratedScale: any;
+    }): void;
     private _renderStats;
 }
 export default PlanarFreehandROITool;

package/dist/cjs/tools/annotation/PlanarFreehandROITool.js

@@ -139,7 +139,6 @@ class PlanarFreehandROITool extends ContourSegmentationBaseTool_1.default {
             }
         };
         this._calculateCachedStats = (annotation, viewport, renderingEngine, enabledElement) => {
-            var _a, _b, _c;
             const { data } = annotation;
             const { cachedStats } = data;
             const { polyline: points, closed } = data.contour;
@@ -152,45 +151,12 @@ class PlanarFreehandROITool extends ContourSegmentationBaseTool_1.default {
                 }
                 const { imageData, metadata } = image;
                 const canvasCoordinates = points.map((p) => viewport.worldToCanvas(p));
-                const canvasPoint = canvasCoordinates[0];
-                const originalWorldPoint = viewport.canvasToWorld(canvasPoint);
-                const deltaXPoint = viewport.canvasToWorld([
-                    canvasPoint[0] + 1,
-                    canvasPoint[1],
-                ]);
-                const deltaYPoint = viewport.canvasToWorld([
-                    canvasPoint[0],
-                    canvasPoint[1] + 1,
-                ]);
-                const deltaInX = gl_matrix_1.vec3.distance(originalWorldPoint, deltaXPoint);
-                const deltaInY = gl_matrix_1.vec3.distance(originalWorldPoint, deltaYPoint);
-                const worldPosIndex = core_1.utilities.transformWorldToIndex(imageData, points[0]);
-                worldPosIndex[0] = Math.floor(worldPosIndex[0]);
-                worldPosIndex[1] = Math.floor(worldPosIndex[1]);
-                worldPosIndex[2] = Math.floor(worldPosIndex[2]);
-                let iMin = worldPosIndex[0];
-                let iMax = worldPosIndex[0];
-                let jMin = worldPosIndex[1];
-                let jMax = worldPosIndex[1];
-                let kMin = worldPosIndex[2];
-                let kMax = worldPosIndex[2];
-                for (let j = 1; j < points.length; j++) {
-                    const worldPosIndex = core_1.utilities.transformWorldToIndex(imageData, points[j]);
-                    worldPosIndex[0] = Math.floor(worldPosIndex[0]);
-                    worldPosIndex[1] = Math.floor(worldPosIndex[1]);
-                    worldPosIndex[2] = Math.floor(worldPosIndex[2]);
-                    iMin = Math.min(iMin, worldPosIndex[0]);
-                    iMax = Math.max(iMax, worldPosIndex[0]);
-                    jMin = Math.min(jMin, worldPosIndex[1]);
-                    jMax = Math.max(jMax, worldPosIndex[1]);
-                    kMin = Math.min(kMin, worldPosIndex[2]);
-                    kMax = Math.max(kMax, worldPosIndex[2]);
-                }
-                const worldPosIndex2 = core_1.utilities.transformWorldToIndex(imageData, points[1]);
-                worldPosIndex2[0] = Math.floor(worldPosIndex2[0]);
-                worldPosIndex2[1] = Math.floor(worldPosIndex2[1]);
-                worldPosIndex2[2] = Math.floor(worldPosIndex2[2]);
-                const { scale, areaUnits } = (0, getCalibratedUnits_1.getCalibratedLengthUnitsAndScale)(image, () => {
+                const modalityUnitOptions = {
+                    isPreScaled: (0, isViewportPreScaled_1.isViewportPreScaled)(viewport, targetId),
+                    isSuvScaled: this.isSuvScaled(viewport, targetId, annotation.metadata.referencedImageId),
+                };
+                const modalityUnit = (0, getModalityUnit_1.getModalityUnit)(metadata.Modality, annotation.metadata.referencedImageId, modalityUnitOptions);
+                const calibratedScale = (0, getCalibratedUnits_1.getCalibratedLengthUnitsAndScale)(image, () => {
                     const polyline = data.contour.polyline;
                     const numPoints = polyline.length;
                     const projectedPolyline = new Array(numPoints);
@@ -198,10 +164,7 @@ class PlanarFreehandROITool extends ContourSegmentationBaseTool_1.default {
                         projectedPolyline[i] = viewport.worldToCanvas(polyline[i]);
                     }
                     const { maxX: canvasMaxX, maxY: canvasMaxY, minX: canvasMinX, minY: canvasMinY, } = utilities_1.math.polyline.getAABB(projectedPolyline);
-                    const topLeftBBWorld = viewport.canvasToWorld([
-                        canvasMinX,
-                        canvasMinY,
-                    ]);
+                    const topLeftBBWorld = viewport.canvasToWorld([canvasMinX, canvasMinY]);
                     const topLeftBBIndex = core_1.utilities.transformWorldToIndex(imageData, topLeftBBWorld);
                     const bottomRightBBWorld = viewport.canvasToWorld([
                         canvasMaxX,
@@ -210,71 +173,29 @@ class PlanarFreehandROITool extends ContourSegmentationBaseTool_1.default {
                     const bottomRightBBIndex = core_1.utilities.transformWorldToIndex(imageData, bottomRightBBWorld);
                     return [topLeftBBIndex, bottomRightBBIndex];
                 });
-                let area = math_1.polyline.getArea(canvasCoordinates) / scale / scale;
-                area *= deltaInX * deltaInY;
-                const iDelta = 0.01 * (iMax - iMin);
-                const jDelta = 0.01 * (jMax - jMin);
-                const kDelta = 0.01 * (kMax - kMin);
-                iMin = Math.floor(iMin - iDelta);
-                iMax = Math.ceil(iMax + iDelta);
-                jMin = Math.floor(jMin - jDelta);
-                jMax = Math.ceil(jMax + jDelta);
-                kMin = Math.floor(kMin - kDelta);
-                kMax = Math.ceil(kMax + kDelta);
-                const boundsIJK = [
-                    [iMin, iMax],
-                    [jMin, jMax],
-                    [kMin, kMax],
-                ];
-                const worldPosEnd = imageData.indexToWorld([iMax, jMax, kMax]);
-                const canvasPosEnd = viewport.worldToCanvas(worldPosEnd);
-                let curRow = 0;
-                let intersections = [];
-                let intersectionCounter = 0;
-                const pointsInShape = (0, pointInShapeCallback_1.default)(imageData, (pointLPS, pointIJK) => {
-                    let result = true;
-                    const point = viewport.worldToCanvas(pointLPS);
-                    if (point[1] != curRow) {
-                        intersectionCounter = 0;
-                        curRow = point[1];
-                        intersections = (0, polyline_1.getLineSegmentIntersectionsCoordinates)(canvasCoordinates, point, [canvasPosEnd[0], point[1]]);
-                        intersections.sort((function (index) {
-                            return function (a, b) {
-                                return a[index] === b[index]
-                                    ? 0
-                                    : a[index] < b[index]
-                                        ? -1
-                                        : 1;
-                            };
-                        })(0));
-                    }
-                    if (intersections.length && point[0] > intersections[0][0]) {
-                        intersections.shift();
-                        intersectionCounter++;
-                    }
-                    if (intersectionCounter % 2 === 0) {
-                        result = false;
-                    }
-                    return result;
-                }, this.configuration.statsCalculator.statsCallback, boundsIJK);
-                const modalityUnitOptions = {
-                    isPreScaled: (0, isViewportPreScaled_1.isViewportPreScaled)(viewport, targetId),
-                    isSuvScaled: this.isSuvScaled(viewport, targetId, annotation.metadata.referencedImageId),
-                };
-                const modalityUnit = (0, getModalityUnit_1.getModalityUnit)(metadata.Modality, annotation.metadata.referencedImageId, modalityUnitOptions);
-                const stats = this.configuration.statsCalculator.getStatistics();
-                cachedStats[targetId] = {
-                    Modality: metadata.Modality,
-                    area,
-                    perimeter: (0, calculatePerimeter_1.default)(canvasCoordinates, closed),
-                    mean: (_a = stats.mean) === null || _a === void 0 ? void 0 : _a.value,
-                    max: (_b = stats.max) === null || _b === void 0 ? void 0 : _b.value,
-                    stdDev: (_c = stats.stdDev) === null || _c === void 0 ? void 0 : _c.value,
-                    statsArray: stats.array,
-                    pointsInShape: pointsInShape,
-                    areaUnit: areaUnits,
-                    modalityUnit,
-                };
+                if (closed) {
+                    this.updateClosedCachedStats({
+                        targetId,
+                        viewport,
+                        canvasCoordinates,
+                        points,
+                        imageData,
+                        metadata,
+                        cachedStats,
+                        modalityUnit,
+                        calibratedScale,
+                    });
+                }
+                else {
+                    this.updateOpenCachedStats({
+                        metadata,
+                        canvasCoordinates,
+                        targetId,
+                        cachedStats,
+                        modalityUnit,
+                        calibratedScale,
+                    });
+                }
             }
             (0, state_1.triggerAnnotationModified)(annotation, enabledElement.viewport.element, enums_1.ChangeTypes.StatsUpdated);
             annotation.invalidated = false;
@@ -469,10 +390,118 @@ class PlanarFreehandROITool extends ContourSegmentationBaseTool_1.default {
             }
         }
     }
+    updateClosedCachedStats({ viewport, points, imageData, metadata, cachedStats, targetId, modalityUnit, canvasCoordinates, calibratedScale, }) {
+        var _a, _b, _c;
+        const { scale, areaUnits, units } = calibratedScale;
+        const canvasPoint = canvasCoordinates[0];
+        const originalWorldPoint = viewport.canvasToWorld(canvasPoint);
+        const deltaXPoint = viewport.canvasToWorld([
+            canvasPoint[0] + 1,
+            canvasPoint[1],
+        ]);
+        const deltaYPoint = viewport.canvasToWorld([
+            canvasPoint[0],
+            canvasPoint[1] + 1,
+        ]);
+        const deltaInX = gl_matrix_1.vec3.distance(originalWorldPoint, deltaXPoint);
+        const deltaInY = gl_matrix_1.vec3.distance(originalWorldPoint, deltaYPoint);
+        const worldPosIndex = core_1.utilities.transformWorldToIndex(imageData, points[0]);
+        worldPosIndex[0] = Math.floor(worldPosIndex[0]);
+        worldPosIndex[1] = Math.floor(worldPosIndex[1]);
+        worldPosIndex[2] = Math.floor(worldPosIndex[2]);
+        let iMin = worldPosIndex[0];
+        let iMax = worldPosIndex[0];
+        let jMin = worldPosIndex[1];
+        let jMax = worldPosIndex[1];
+        let kMin = worldPosIndex[2];
+        let kMax = worldPosIndex[2];
+        for (let j = 1; j < points.length; j++) {
+            const worldPosIndex = core_1.utilities.transformWorldToIndex(imageData, points[j]);
+            worldPosIndex[0] = Math.floor(worldPosIndex[0]);
+            worldPosIndex[1] = Math.floor(worldPosIndex[1]);
+            worldPosIndex[2] = Math.floor(worldPosIndex[2]);
+            iMin = Math.min(iMin, worldPosIndex[0]);
+            iMax = Math.max(iMax, worldPosIndex[0]);
+            jMin = Math.min(jMin, worldPosIndex[1]);
+            jMax = Math.max(jMax, worldPosIndex[1]);
+            kMin = Math.min(kMin, worldPosIndex[2]);
+            kMax = Math.max(kMax, worldPosIndex[2]);
+        }
+        const worldPosIndex2 = core_1.utilities.transformWorldToIndex(imageData, points[1]);
+        worldPosIndex2[0] = Math.floor(worldPosIndex2[0]);
+        worldPosIndex2[1] = Math.floor(worldPosIndex2[1]);
+        worldPosIndex2[2] = Math.floor(worldPosIndex2[2]);
+        let area = math_1.polyline.getArea(canvasCoordinates) / scale / scale;
+        area *= deltaInX * deltaInY;
+        const iDelta = 0.01 * (iMax - iMin);
+        const jDelta = 0.01 * (jMax - jMin);
+        const kDelta = 0.01 * (kMax - kMin);
+        iMin = Math.floor(iMin - iDelta);
+        iMax = Math.ceil(iMax + iDelta);
+        jMin = Math.floor(jMin - jDelta);
+        jMax = Math.ceil(jMax + jDelta);
+        kMin = Math.floor(kMin - kDelta);
+        kMax = Math.ceil(kMax + kDelta);
+        const boundsIJK = [
+            [iMin, iMax],
+            [jMin, jMax],
+            [kMin, kMax],
+        ];
+        const worldPosEnd = imageData.indexToWorld([iMax, jMax, kMax]);
+        const canvasPosEnd = viewport.worldToCanvas(worldPosEnd);
+        let curRow = 0;
+        let intersections = [];
+        let intersectionCounter = 0;
+        const pointsInShape = (0, pointInShapeCallback_1.default)(imageData, (pointLPS, _pointIJK) => {
+            let result = true;
+            const point = viewport.worldToCanvas(pointLPS);
+            if (point[1] != curRow) {
+                intersectionCounter = 0;
+                curRow = point[1];
+                intersections = (0, polyline_1.getLineSegmentIntersectionsCoordinates)(canvasCoordinates, point, [canvasPosEnd[0], point[1]]);
+                intersections.sort((function (index) {
+                    return function (a, b) {
+                        return a[index] === b[index] ? 0 : a[index] < b[index] ? -1 : 1;
+                    };
+                })(0));
+            }
+            if (intersections.length && point[0] > intersections[0][0]) {
+                intersections.shift();
+                intersectionCounter++;
+            }
+            if (intersectionCounter % 2 === 0) {
+                result = false;
+            }
+            return result;
+        }, this.configuration.statsCalculator.statsCallback, boundsIJK);
+        const stats = this.configuration.statsCalculator.getStatistics();
+        cachedStats[targetId] = {
+            Modality: metadata.Modality,
+            area,
+            perimeter: (0, calculatePerimeter_1.default)(canvasCoordinates, closed) / scale,
+            mean: (_a = stats.mean) === null || _a === void 0 ? void 0 : _a.value,
+            max: (_b = stats.max) === null || _b === void 0 ? void 0 : _b.value,
+            stdDev: (_c = stats.stdDev) === null || _c === void 0 ? void 0 : _c.value,
+            statsArray: stats.array,
+            pointsInShape: pointsInShape,
+            areaUnit: areaUnits,
+            modalityUnit,
+            unit: units,
+        };
+    }
+    updateOpenCachedStats({ targetId, metadata, canvasCoordinates, cachedStats, modalityUnit, calibratedScale, }) {
+        const { scale, units } = calibratedScale;
+        cachedStats[targetId] = {
+            Modality: metadata.Modality,
+            length: (0, calculatePerimeter_1.default)(canvasCoordinates, false) / scale,
+            modalityUnit,
+            unit: units,
+        };
+    }
 }
 function defaultGetTextLines(data, targetId) {
     const cachedVolumeStats = data.cachedStats[targetId];
-    const { area, mean, stdDev, perimeter, max, isEmptyArea, areaUnit, modalityUnit, } = cachedVolumeStats || {};
+    const { area, mean, stdDev, length, perimeter, max, isEmptyArea, areaUnit, modalityUnit, unit, } = cachedVolumeStats || {};
     const textLines = [];
     if (area) {
         const areaLine = isEmptyArea
@@ -490,7 +519,10 @@ function defaultGetTextLines(data, targetId) {
         textLines.push(`Std Dev: ${(0, utilities_1.roundNumber)(stdDev)} ${modalityUnit}`);
     }
     if (perimeter) {
-        textLines.push(`Perimeter: ${(0, utilities_1.roundNumber)(perimeter)} ${modalityUnit}`);
+        textLines.push(`Perimeter: ${(0, utilities_1.roundNumber)(perimeter)} ${unit}`);
+    }
+    if (length) {
+        textLines.push(`${(0, utilities_1.roundNumber)(length)} ${unit}`);
     }
     return textLines;
 }

package/dist/cjs/tools/annotation/PlanarFreehandROITool.js.map

@@ -1 +1 @@
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package/dist/cjs/utilities/getCalibratedUnits.js

@@ -14,8 +14,17 @@ const SUPPORTED_PROBE_VARIANT = [
     '4,3',
 ];
 const UNIT_MAPPING = {
+    0: 'px',
+    1: 'percent',
+    2: 'dB',
     3: 'cm',
     4: 'seconds',
+    5: 'hertz',
+    6: 'dB/seconds',
+    7: 'cm/sec',
+    8: 'cm\xb2',
+    9: 'cm\xb2/s',
+    0xc: 'degrees',
 };
 const EPS = 1e-3;
 const SQUARE = '\xb2';
@@ -63,10 +72,10 @@ const getCalibratedLengthUnitsAndScale = (image, handles) => {
         const physicalDeltaY = Math.abs(region.physicalDeltaY);
         const isSamePhysicalDelta = core_1.utilities.isEqual(physicalDeltaX, physicalDeltaY, EPS);
         if (isSamePhysicalDelta) {
-            scale = 1 / (physicalDeltaX * 10);
+            scale = 1 / physicalDeltaX;
             calibrationType = 'US Region';
-            units = 'mm';
-            areaUnits = 'mm' + SQUARE;
+            units = UNIT_MAPPING[region.physicalUnitsXDirection] || 'unknown';
+            areaUnits = units + SQUARE;
         }
         else {
             return { units: PIXEL_UNITS, areaUnits: PIXEL_UNITS + SQUARE, scale };

package/dist/cjs/utilities/getCalibratedUnits.js.map

@@ -1 +1 @@
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