@cornerstonejs/tools 1.65.3 → 1.65.5

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (88) hide show
  1. package/dist/cjs/stateManagement/annotation/annotationSelection.js +2 -1
  2. package/dist/cjs/stateManagement/annotation/annotationSelection.js.map +1 -1
  3. package/dist/cjs/tools/MIPJumpToClickTool.js +2 -1
  4. package/dist/cjs/tools/MIPJumpToClickTool.js.map +1 -1
  5. package/dist/cjs/tools/StackScrollToolMouseWheelTool.js +2 -1
  6. package/dist/cjs/tools/StackScrollToolMouseWheelTool.js.map +1 -1
  7. package/dist/cjs/tools/annotation/CircleROITool.js +4 -4
  8. package/dist/cjs/tools/annotation/CircleROITool.js.map +1 -1
  9. package/dist/cjs/tools/annotation/EllipticalROITool.js +5 -5
  10. package/dist/cjs/tools/annotation/EllipticalROITool.js.map +1 -1
  11. package/dist/cjs/tools/annotation/PlanarFreehandROITool.js +4 -4
  12. package/dist/cjs/tools/annotation/PlanarFreehandROITool.js.map +1 -1
  13. package/dist/cjs/tools/annotation/RectangleROITool.js +4 -4
  14. package/dist/cjs/tools/annotation/RectangleROITool.js.map +1 -1
  15. package/dist/cjs/tools/base/AnnotationDisplayTool.js +2 -1
  16. package/dist/cjs/tools/base/AnnotationDisplayTool.js.map +1 -1
  17. package/dist/cjs/tools/base/AnnotationTool.js +2 -1
  18. package/dist/cjs/tools/base/AnnotationTool.js.map +1 -1
  19. package/dist/cjs/tools/base/BaseTool.js +2 -1
  20. package/dist/cjs/tools/base/BaseTool.js.map +1 -1
  21. package/dist/cjs/types/CalculatorTypes.d.ts +29 -1
  22. package/dist/cjs/types/index.d.ts +2 -2
  23. package/dist/cjs/utilities/getVolumeId.d.ts +1 -0
  24. package/dist/cjs/utilities/getVolumeId.js +16 -0
  25. package/dist/cjs/utilities/getVolumeId.js.map +1 -0
  26. package/dist/cjs/utilities/math/basic/BasicStatsCalculator.d.ts +2 -2
  27. package/dist/cjs/utilities/math/basic/BasicStatsCalculator.js +34 -11
  28. package/dist/cjs/utilities/math/basic/BasicStatsCalculator.js.map +1 -1
  29. package/dist/cjs/utilities/math/basic/Calculator.d.ts +2 -2
  30. package/dist/cjs/utilities/math/basic/Calculator.js.map +1 -1
  31. package/dist/esm/stateManagement/annotation/annotationSelection.js +1 -1
  32. package/dist/esm/stateManagement/annotation/annotationSelection.js.map +1 -1
  33. package/dist/esm/tools/MIPJumpToClickTool.js +2 -1
  34. package/dist/esm/tools/MIPJumpToClickTool.js.map +1 -1
  35. package/dist/esm/tools/StackScrollToolMouseWheelTool.js +2 -1
  36. package/dist/esm/tools/StackScrollToolMouseWheelTool.js.map +1 -1
  37. package/dist/esm/tools/annotation/CircleROITool.js +4 -4
  38. package/dist/esm/tools/annotation/CircleROITool.js.map +1 -1
  39. package/dist/esm/tools/annotation/EllipticalROITool.js +5 -5
  40. package/dist/esm/tools/annotation/EllipticalROITool.js.map +1 -1
  41. package/dist/esm/tools/annotation/PlanarFreehandROITool.js +4 -4
  42. package/dist/esm/tools/annotation/PlanarFreehandROITool.js.map +1 -1
  43. package/dist/esm/tools/annotation/RectangleROITool.js +4 -4
  44. package/dist/esm/tools/annotation/RectangleROITool.js.map +1 -1
  45. package/dist/esm/tools/base/AnnotationDisplayTool.js +2 -1
  46. package/dist/esm/tools/base/AnnotationDisplayTool.js.map +1 -1
  47. package/dist/esm/tools/base/AnnotationTool.js +2 -1
  48. package/dist/esm/tools/base/AnnotationTool.js.map +1 -1
  49. package/dist/esm/tools/base/BaseTool.js +2 -1
  50. package/dist/esm/tools/base/BaseTool.js.map +1 -1
  51. package/dist/esm/utilities/getVolumeId.js +12 -0
  52. package/dist/esm/utilities/getVolumeId.js.map +1 -0
  53. package/dist/esm/utilities/math/basic/BasicStatsCalculator.js +34 -11
  54. package/dist/esm/utilities/math/basic/BasicStatsCalculator.js.map +1 -1
  55. package/dist/esm/utilities/math/basic/Calculator.js.map +1 -1
  56. package/dist/types/tools/MIPJumpToClickTool.d.ts.map +1 -1
  57. package/dist/types/tools/StackScrollToolMouseWheelTool.d.ts.map +1 -1
  58. package/dist/types/tools/base/AnnotationDisplayTool.d.ts.map +1 -1
  59. package/dist/types/tools/base/AnnotationTool.d.ts.map +1 -1
  60. package/dist/types/tools/base/BaseTool.d.ts.map +1 -1
  61. package/dist/types/types/CalculatorTypes.d.ts +29 -1
  62. package/dist/types/types/CalculatorTypes.d.ts.map +1 -1
  63. package/dist/types/types/index.d.ts +2 -2
  64. package/dist/types/types/index.d.ts.map +1 -1
  65. package/dist/types/utilities/getVolumeId.d.ts +2 -0
  66. package/dist/types/utilities/getVolumeId.d.ts.map +1 -0
  67. package/dist/types/utilities/math/basic/BasicStatsCalculator.d.ts +2 -2
  68. package/dist/types/utilities/math/basic/BasicStatsCalculator.d.ts.map +1 -1
  69. package/dist/types/utilities/math/basic/Calculator.d.ts +2 -2
  70. package/dist/types/utilities/math/basic/Calculator.d.ts.map +1 -1
  71. package/dist/umd/index.js +1 -1
  72. package/dist/umd/index.js.map +1 -1
  73. package/package.json +3 -3
  74. package/src/stateManagement/annotation/annotationSelection.ts +1 -1
  75. package/src/tools/MIPJumpToClickTool.ts +2 -1
  76. package/src/tools/StackScrollToolMouseWheelTool.ts +2 -1
  77. package/src/tools/annotation/CircleROITool.ts +4 -4
  78. package/src/tools/annotation/EllipticalROITool.ts +5 -5
  79. package/src/tools/annotation/PlanarFreehandROITool.ts +4 -4
  80. package/src/tools/annotation/RectangleROITool.ts +4 -4
  81. package/src/tools/base/AnnotationDisplayTool.ts +2 -1
  82. package/src/tools/base/AnnotationTool.ts +2 -1
  83. package/src/tools/base/BaseTool.ts +2 -1
  84. package/src/types/CalculatorTypes.ts +14 -1
  85. package/src/types/index.ts +4 -1
  86. package/src/utilities/getVolumeId.ts +13 -0
  87. package/src/utilities/math/basic/BasicStatsCalculator.ts +44 -14
  88. package/src/utilities/math/basic/Calculator.ts +5 -2
package/dist/esm/tools/annotation/EllipticalROITool.js.map CHANGED
@@ -1 +1 @@
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package/dist/esm/tools/annotation/PlanarFreehandROITool.js CHANGED
@@ -234,10 +234,10 @@ class PlanarFreehandROITool extends ContourSegmentationBaseTool {
234
234
  cachedStats[targetId] = {
235
235
  Modality: metadata.Modality,
236
236
  area,
237
- mean: stats[1]?.value,
238
- max: stats[0]?.value,
239
- stdDev: stats[3]?.value,
240
- statsArray: stats,
237
+ mean: stats.mean?.value,
238
+ max: stats.max?.value,
239
+ stdDev: stats.stdDev?.value,
240
+ statsArray: stats.array,
241
241
  pointsInShape: pointsInShape,
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242
  areaUnit: getCalibratedAreaUnits(null, image),
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243
  modalityUnit,
package/dist/esm/tools/annotation/PlanarFreehandROITool.js.map CHANGED
@@ -1 +1 @@
1
- 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package/dist/esm/tools/annotation/RectangleROITool.js CHANGED
@@ -500,10 +500,10 @@ class RectangleROITool extends AnnotationTool {
500
500
  cachedStats[targetId] = {
501
501
  Modality: metadata.Modality,
502
502
  area,
503
- mean: stats[1]?.value,
504
- stdDev: stats[2]?.value,
505
- max: stats[0]?.value,
506
- statsArray: stats,
503
+ mean: stats.mean?.value,
504
+ stdDev: stats.stdDev?.value,
505
+ max: stats.max?.value,
506
+ statsArray: stats.array,
507
507
  pointsInShape: pointsInShape,
508
508
  areaUnit: getCalibratedAreaUnits(null, image),
509
509
  modalityUnit,
package/dist/esm/tools/annotation/RectangleROITool.js.map CHANGED
@@ -1 +1 @@
1
- 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1
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package/dist/esm/tools/base/AnnotationDisplayTool.js CHANGED
@@ -5,6 +5,7 @@ import triggerAnnotationRender from '../../utilities/triggerAnnotationRender';
5
5
  import filterAnnotationsForDisplay from '../../utilities/planar/filterAnnotationsForDisplay';
6
6
  import { getStyleProperty } from '../../stateManagement/annotation/config/helpers';
7
7
  import { getState } from '../../stateManagement/annotation/config';
8
+ import { getVolumeId } from '../../utilities/getVolumeId';
8
9
  class AnnotationDisplayTool extends BaseTool {
9
10
  constructor() {
10
11
  super(...arguments);
@@ -51,7 +52,7 @@ class AnnotationDisplayTool extends BaseTool {
51
52
  referencedImageId = targetId.split('videoId:')[1];
52
53
  }
53
54
  else {
54
- const volumeId = targetId.split(/volumeId:|\?/)[1];
55
+ const volumeId = getVolumeId(targetId);
55
56
  const imageVolume = cache.getVolume(volumeId);
56
57
  referencedImageId = utilities.getClosestImageId(imageVolume, worldPos, viewPlaneNormal);
57
58
  }
package/dist/esm/tools/base/AnnotationDisplayTool.js.map CHANGED
@@ -1 +1 @@
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package/dist/esm/tools/base/AnnotationTool.js CHANGED
@@ -5,6 +5,7 @@ import { isAnnotationLocked } from '../../stateManagement/annotation/annotationL
5
5
  import { isAnnotationVisible } from '../../stateManagement/annotation/annotationVisibility';
6
6
  import { addAnnotation } from '../../stateManagement/annotation/annotationState';
7
7
  import { triggerAnnotationModified } from '../../stateManagement/annotation/helpers/state';
8
+ import { getVolumeId } from '../../utilities/getVolumeId';
8
9
  class AnnotationTool extends AnnotationDisplayTool {
9
10
  constructor(toolProps, defaultToolProps) {
10
11
  super(toolProps, defaultToolProps);
@@ -133,7 +134,7 @@ class AnnotationTool extends AnnotationDisplayTool {
133
134
  }
134
135
  isSuvScaled(viewport, targetId, imageId) {
135
136
  if (viewport instanceof BaseVolumeViewport) {
136
- const volumeId = targetId.split(/volumeId:|\?/)[1];
137
+ const volumeId = getVolumeId(targetId);
137
138
  const volume = cache.getVolume(volumeId);
138
139
  return volume.scaling?.PT !== undefined;
139
140
  }
package/dist/esm/tools/base/AnnotationTool.js.map CHANGED
@@ -1 +1 @@
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package/dist/esm/tools/base/BaseTool.js CHANGED
@@ -1,5 +1,6 @@
1
1
  import { utilities, BaseVolumeViewport } from '@cornerstonejs/core';
2
2
  import ToolModes from '../../enums/ToolModes';
3
+ import { getVolumeId } from '../../utilities/getVolumeId';
3
4
  class BaseTool {
4
5
  constructor(toolProps, defaultToolProps) {
5
6
  const initialProps = utilities.deepMerge(defaultToolProps, toolProps);
@@ -62,7 +63,7 @@ class BaseTool {
62
63
  return viewports[0].getImageData();
63
64
  }
64
65
  else if (targetId.startsWith('volumeId:')) {
65
- const volumeId = targetId.split(/volumeId:|\?/)[1];
66
+ const volumeId = getVolumeId(targetId);
66
67
  const viewports = utilities.getViewportsWithVolumeId(volumeId, renderingEngine.id);
67
68
  if (!viewports || !viewports.length) {
68
69
  return;
package/dist/esm/tools/base/BaseTool.js.map CHANGED
@@ -1 +1 @@
1
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package/dist/esm/utilities/getVolumeId.js ADDED
@@ -0,0 +1,12 @@
1
+ export const getVolumeId = (targetId) => {
2
+ const prefix = 'volumeId:';
3
+ const str = targetId.includes(prefix)
4
+ ? targetId.substring(prefix.length)
5
+ : targetId;
6
+ if (str.startsWith('nifti:')) {
7
+ return str;
8
+ }
9
+ const index = str.indexOf('?');
10
+ return index === -1 ? str : str.substring(0, index);
11
+ };
12
+ //# sourceMappingURL=getVolumeId.js.map
package/dist/esm/utilities/getVolumeId.js.map ADDED
@@ -0,0 +1 @@
1
+ {"version":3,"file":"getVolumeId.js","sourceRoot":"","sources":["../../../src/utilities/getVolumeId.ts"],"names":[],"mappings":"AAAA,MAAM,CAAC,MAAM,WAAW,GAAG,CAAC,QAAgB,EAAE,EAAE;IAC9C,MAAM,MAAM,GAAG,WAAW,CAAC;IAC3B,MAAM,GAAG,GAAG,QAAQ,CAAC,QAAQ,CAAC,MAAM,CAAC;QACnC,CAAC,CAAC,QAAQ,CAAC,SAAS,CAAC,MAAM,CAAC,MAAM,CAAC;QACnC,CAAC,CAAC,QAAQ,CAAC;IAEb,IAAI,GAAG,CAAC,UAAU,CAAC,QAAQ,CAAC,EAAE;QAC5B,OAAO,GAAG,CAAC;KACZ;IAED,MAAM,KAAK,GAAG,GAAG,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC;IAC/B,OAAO,KAAK,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,GAAG,CAAC,SAAS,CAAC,CAAC,EAAE,KAAK,CAAC,CAAC;AACtD,CAAC,CAAC"}
package/dist/esm/utilities/math/basic/BasicStatsCalculator.js CHANGED
@@ -25,22 +25,45 @@ export default class BasicStatsCalculator extends Calculator {
25
25
  const mean = this.sum.map((sum) => sum / this.count);
26
26
  const stdDev = this.squaredDiffSum.map((squaredDiffSum) => Math.sqrt(squaredDiffSum / this.count));
27
27
  const stdDevWithSumSquare = this.sumSquares.map((it, idx) => Math.sqrt(this.sumSquares[idx] / this.count - mean[idx] ** 2));
28
- const currentMax = this.max;
28
+ const named = {
29
+ max: {
30
+ name: 'max',
31
+ label: 'Max Pixel',
32
+ value: singleArrayAsNumber(this.max),
33
+ unit: null,
34
+ },
35
+ mean: {
36
+ name: 'mean',
37
+ label: 'Mean Pixel',
38
+ value: singleArrayAsNumber(mean),
39
+ unit: null,
40
+ },
41
+ stdDev: {
42
+ name: 'stdDev',
43
+ label: 'Standard Deviation',
44
+ value: singleArrayAsNumber(stdDev),
45
+ unit: null,
46
+ },
47
+ stdDevWithSumSquare: {
48
+ name: 'stdDevWithSumSquare',
49
+ value: singleArrayAsNumber(stdDevWithSumSquare),
50
+ unit: null,
51
+ },
52
+ count: {
53
+ name: 'count',
54
+ label: 'Pixel Count',
55
+ value: this.count,
56
+ unit: null,
57
+ },
58
+ array: [],
59
+ };
60
+ named.array.push(named.max, named.mean, named.stdDev, named.stdDevWithSumSquare, named.count);
29
61
  this.max = [-Infinity];
30
62
  this.sum = [0];
31
63
  this.sumSquares = [0];
32
64
  this.squaredDiffSum = [0];
33
65
  this.count = 0;
34
- return [
35
- { name: 'max', value: singleArrayAsNumber(currentMax), unit: null },
36
- { name: 'mean', value: singleArrayAsNumber(mean), unit: null },
37
- { name: 'stdDev', value: singleArrayAsNumber(stdDev), unit: null },
38
- {
39
- name: 'stdDevWithSumSquare',
40
- value: singleArrayAsNumber(stdDevWithSumSquare),
41
- unit: null,
42
- },
43
- ];
66
+ return named;
44
67
  }; }
45
68
  }
46
69
  function singleArrayAsNumber(val) {
package/dist/esm/utilities/math/basic/BasicStatsCalculator.js.map CHANGED
@@ -1 +1 @@
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