npm - @cornerstonejs/tools - Versions diffs - 1.58.5 → 1.59.1 - Mend

@cornerstonejs/tools 1.58.5 → 1.59.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (69) hide show

package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/convertContourToLabelmap.js CHANGED Viewed

@@ -151,9 +151,21 @@ function _getAnnotationMapFromSegmentation(contourRepresentationData, options =
     const annotationUIDsInSegmentMap = new Map();
     segmentIndices.forEach((index) => {
         const annotationUIDsInSegment = annotationMap.get(index);
-        const annotations = Array.from(annotationUIDsInSegment).map((uid) => {
+        let uids = Array.from(annotationUIDsInSegment);
+        uids = uids.filter((uid) => !(0, __1.getAnnotation)(uid).parentAnnotationUID);
+        const annotations = uids.map((uid) => {
+            var _a;
             const annotation = (0, __1.getAnnotation)(uid);
-            return annotation;
+            const hasChildAnnotations = (_a = annotation.childAnnotationUIDs) === null || _a === void 0 ? void 0 : _a.length;
+            return {
+                polyline: annotation.data.contour.polyline,
+                referencedImageId: annotation.metadata.referencedImageId,
+                holesPolyline: hasChildAnnotations &&
+                    annotation.childAnnotationUIDs.map((childUID) => {
+                        const childAnnotation = (0, __1.getAnnotation)(childUID);
+                        return childAnnotation.data.contour.polyline;
+                    }),
+            };
         });
         annotationUIDsInSegmentMap.set(index, annotations);
     });

package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/convertContourToLabelmap.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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1	+ 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package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/labelmapComputationStrategies.js CHANGED Viewed

@@ -56,21 +56,14 @@ function computeLabelmapFromContourSegmentation(segmentationId, options = {}) {
             : (0, segmentation_1.getUniqueSegmentIndices)(segmentationId);
         const segmentation = (0, segmentationState_1.getSegmentation)(segmentationId);
         const representationData = segmentation.representationData.CONTOUR;
-        let result;
-        if (isVolume) {
-            result = yield (0, convertContourToLabelmap_1.convertContourToVolumeLabelmap)(representationData, {
-                segmentIndices,
-                segmentationRepresentationUID: options.segmentationRepresentationUID,
-                viewport: options.viewport,
-            });
-        }
-        else {
-            result = yield (0, convertContourToLabelmap_1.convertContourToStackLabelmap)(representationData, {
-                segmentIndices,
-                segmentationRepresentationUID: options.segmentationRepresentationUID,
-                viewport: options.viewport,
-            });
-        }
+        const convertFunction = isVolume
+            ? convertContourToLabelmap_1.convertContourToVolumeLabelmap
+            : convertContourToLabelmap_1.convertContourToStackLabelmap;
+        const result = yield convertFunction(representationData, {
+            segmentIndices,
+            segmentationRepresentationUID: options.segmentationRepresentationUID,
+            viewport: options.viewport,
+        });
         return result;
     });
 }

package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/labelmapComputationStrategies.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/cjs/types/ContourAnnotation.d.ts CHANGED Viewed

@@ -13,5 +13,6 @@ export declare type ContourAnnotationData = {
             windingDirection?: ContourWindingDirection;
         };
     };
+    onInterpolationComplete?: () => void;
 };
 export declare type ContourAnnotation = Annotation & ContourAnnotationData;

package/dist/cjs/utilities/math/polyline/combinePolyline.js CHANGED Viewed

@@ -62,8 +62,8 @@ function getSourceAndTargetPointsList(targetPolyline, sourcePolyline) {
     const targetPolylinePoints = [];
     const sourcePolylinePoints = [];
     const sourceIntersectionsCache = new Map();
-    const isFisrtPointInside = (0, containsPoint_1.default)(sourcePolyline, targetPolyline[0]);
-    let intersectionPointDirection = isFisrtPointInside
+    const isFirstPointInside = (0, containsPoint_1.default)(sourcePolyline, targetPolyline[0]);
+    let intersectionPointDirection = isFirstPointInside
         ? PolylinePointDirection.Exiting
         : PolylinePointDirection.Entering;
     for (let i = 0, len = targetPolyline.length; i < len; i++) {

package/dist/cjs/utilities/math/polyline/containsPoint.d.ts CHANGED Viewed

@@ -1,2 +1,5 @@
 import type { Types } from '@cornerstonejs/core';
-export default function containsPoint(polyline: Types.Point2[], point: Types.Point2, closed?: boolean): boolean;
+export default function containsPoint(polyline: Types.Point2[], point: Types.Point2, options?: {
+    closed?: boolean;
+    holes?: Types.Point2[][];
+}): boolean;

package/dist/cjs/utilities/math/polyline/containsPoint.js CHANGED Viewed

@@ -4,12 +4,22 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 const isClosed_1 = __importDefault(require("./isClosed"));
-function containsPoint(polyline, point, closed) {
+function containsPoint(polyline, point, options = {
+    closed: undefined,
+}) {
     if (polyline.length < 3) {
         return false;
     }
     const numPolylinePoints = polyline.length;
     let numIntersections = 0;
+    const { closed, holes } = options;
+    if (holes === null || holes === void 0 ? void 0 : holes.length) {
+        for (const hole of holes) {
+            if (containsPoint(hole, point)) {
+                return false;
+            }
+        }
+    }
     const shouldClose = !(closed === undefined ? (0, isClosed_1.default)(polyline) : closed);
     const maxSegmentIndex = polyline.length - (shouldClose ? 1 : 2);
     for (let i = 0; i <= maxSegmentIndex; i++) {

package/dist/cjs/utilities/math/polyline/containsPoint.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"containsPoint.js","sourceRoot":"","sources":["../../../../../src/utilities/math/polyline/containsPoint.ts"],"names":[],"mappings":";;;;;AACA,0DAAkC;AAelC,SAAwB,aAAa,CACnC,QAAwB,EACxB,KAAmB,EACnB,UAGI;IACF,MAAM,EAAE,SAAS;CAClB;IAED,IAAI,QAAQ,CAAC,MAAM,GAAG,CAAC,EAAE;QACvB,OAAO,KAAK,CAAC;KACd;IAED,MAAM,iBAAiB,GAAG,QAAQ,CAAC,MAAM,CAAC;IAC1C,IAAI,gBAAgB,GAAG,CAAC,CAAC;IAEzB,MAAM,EAAE,MAAM,EAAE,KAAK,EAAE,GAAG,OAAO,CAAC;IAElC,IAAI,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,MAAM,EAAE;QACjB,KAAK,MAAM,IAAI,IAAI,KAAK,EAAE;YACxB,IAAI,aAAa,CAAC,IAAI,EAAE,KAAK,CAAC,EAAE;gBAC9B,OAAO,KAAK,CAAC;aACd;SACF;KACF;IAGD,MAAM,WAAW,GAAG,CAAC,CAAC,MAAM,KAAK,SAAS,CAAC,CAAC,CAAC,IAAA,kBAAQ,EAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC;IAC1E,MAAM,eAAe,GAAG,QAAQ,CAAC,MAAM,GAAG,CAAC,WAAW,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;IAEhE,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,IAAI,eAAe,EAAE,CAAC,EAAE,EAAE;QACzC,MAAM,EAAE,GAAG,QAAQ,CAAC,CAAC,CAAC,CAAC;QAIvB,MAAM,OAAO,GAAG,CAAC,KAAK,iBAAiB,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC;QACxD,MAAM,EAAE,GAAG,QAAQ,CAAC,OAAO,CAAC,CAAC;QAG7B,MAAM,IAAI,GAAG,EAAE,CAAC,CAAC,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;QAC5C,MAAM,IAAI,GAAG,EAAE,CAAC,CAAC,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;QAC5C,MAAM,IAAI,GAAG,EAAE,CAAC,CAAC,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;QAE5C,MAAM,uBAAuB,GAC3B,KAAK,CAAC,CAAC,CAAC,IAAI,IAAI,IAAI,KAAK,CAAC,CAAC,CAAC,IAAI,IAAI,IAAI,KAAK,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC;QAE1D,IAAI,uBAAuB,EAAE;YAC3B,MAAM,cAAc,GAAG,EAAE,CAAC,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC,CAAC,CAAC;YACvC,IAAI,UAAU,GAAG,cAAc,CAAC;YAEhC,IAAI,CAAC,UAAU,EAAE;gBACf,MAAM,aAAa,GACjB,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,GAAG,EAAE,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC,CAAC,GAAG,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC,CAAC,GAAG,EAAE,CAAC,CAAC,CAAC,CAAC,GAAG,EAAE,CAAC,CAAC,CAAC,CAAC;gBAEnE,UAAU,GAAG,KAAK,CAAC,CAAC,CAAC,IAAI,aAAa,CAAC;aACxC;YAED,gBAAgB,IAAI,UAAU,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;SACxC;KACF;IAED,OAAO,CAAC,CAAC,CAAC,gBAAgB,GAAG,CAAC,CAAC,CAAC;AAClC,CAAC;AA/DD,gCA+DC"}

package/dist/cjs/utilities/math/polyline/index.d.ts CHANGED Viewed

@@ -19,4 +19,5 @@ import pointsAreWithinCloseContourProximity from './pointsAreWithinCloseContourP
 import addCanvasPointsToArray from './addCanvasPointsToArray';
 import pointCanProjectOnLine from './pointCanProjectOnLine';
 import { isPointInsidePolyline3D } from './isPointInsidePolyline3D';
-export { isClosed, containsPoint, containsPoints, getAABB, getArea, getSignedArea, getWindingDirection, getNormal3, getNormal2, intersectPolyline, decimate, getFirstLineSegmentIntersectionIndexes, getLineSegmentIntersectionsIndexes, getLineSegmentIntersectionsCoordinates, getClosestLineSegmentIntersection, getSubPixelSpacingAndXYDirections, pointsAreWithinCloseContourProximity, addCanvasPointsToArray, pointCanProjectOnLine, mergePolylines, subtractPolylines, isPointInsidePolyline3D, };
+import { projectTo2D } from './projectTo2D';
+export { isClosed, containsPoint, containsPoints, getAABB, getArea, getSignedArea, getWindingDirection, getNormal3, getNormal2, intersectPolyline, decimate, getFirstLineSegmentIntersectionIndexes, getLineSegmentIntersectionsIndexes, getLineSegmentIntersectionsCoordinates, getClosestLineSegmentIntersection, getSubPixelSpacingAndXYDirections, pointsAreWithinCloseContourProximity, addCanvasPointsToArray, pointCanProjectOnLine, mergePolylines, subtractPolylines, isPointInsidePolyline3D, projectTo2D, };

package/dist/cjs/utilities/math/polyline/index.js CHANGED Viewed

@@ -3,7 +3,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.isPointInsidePolyline3D = exports.subtractPolylines = exports.mergePolylines = exports.pointCanProjectOnLine = exports.addCanvasPointsToArray = exports.pointsAreWithinCloseContourProximity = exports.getSubPixelSpacingAndXYDirections = exports.getClosestLineSegmentIntersection = exports.getLineSegmentIntersectionsCoordinates = exports.getLineSegmentIntersectionsIndexes = exports.getFirstLineSegmentIntersectionIndexes = exports.decimate = exports.intersectPolyline = exports.getNormal2 = exports.getNormal3 = exports.getWindingDirection = exports.getSignedArea = exports.getArea = exports.getAABB = exports.containsPoints = exports.containsPoint = exports.isClosed = void 0;
+exports.projectTo2D = exports.isPointInsidePolyline3D = exports.subtractPolylines = exports.mergePolylines = exports.pointCanProjectOnLine = exports.addCanvasPointsToArray = exports.pointsAreWithinCloseContourProximity = exports.getSubPixelSpacingAndXYDirections = exports.getClosestLineSegmentIntersection = exports.getLineSegmentIntersectionsCoordinates = exports.getLineSegmentIntersectionsIndexes = exports.getFirstLineSegmentIntersectionIndexes = exports.decimate = exports.intersectPolyline = exports.getNormal2 = exports.getNormal3 = exports.getWindingDirection = exports.getSignedArea = exports.getArea = exports.getAABB = exports.containsPoints = exports.containsPoint = exports.isClosed = void 0;
 const isClosed_1 = __importDefault(require("./isClosed"));
 exports.isClosed = isClosed_1.default;
 const containsPoint_1 = __importDefault(require("./containsPoint"));
@@ -47,4 +47,6 @@ const pointCanProjectOnLine_1 = __importDefault(require("./pointCanProjectOnLine
 exports.pointCanProjectOnLine = pointCanProjectOnLine_1.default;
 const isPointInsidePolyline3D_1 = require("./isPointInsidePolyline3D");
 Object.defineProperty(exports, "isPointInsidePolyline3D", { enumerable: true, get: function () { return isPointInsidePolyline3D_1.isPointInsidePolyline3D; } });
+const projectTo2D_1 = require("./projectTo2D");
+Object.defineProperty(exports, "projectTo2D", { enumerable: true, get: function () { return projectTo2D_1.projectTo2D; } });
 //# sourceMappingURL=index.js.map

package/dist/cjs/utilities/math/polyline/index.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../../src/utilities/math/polyline/index.ts"],"names":[],"mappings":";;;;;;AAAA,0DAAkC;AAwBhC,mBAxBK,kBAAQ,CAwBL;AAvBV,oEAA4C;AAwB1C,wBAxBK,uBAAa,CAwBL;AAvBf,sEAA8C;AAwB5C,yBAxBK,wBAAc,CAwBL;AAvBhB,wDAAgC;AAwB9B,kBAxBK,iBAAO,CAwBL;AAvBT,wDAAgC;AAwB9B,kBAxBK,iBAAO,CAwBL;AAvBT,oEAA4C;AAwB1C,wBAxBK,uBAAa,CAwBL;AAvBf,gFAAwD;AAwBtD,8BAxBK,6BAAmB,CAwBL;AAvBrB,8DAAsC;AAwBpC,qBAxBK,oBAAU,CAwBL;AAvBZ,8DAAsC;AAwBpC,qBAxBK,oBAAU,CAwBL;AAvBZ,uDAAsE;AAkCpE,+FAlCO,gCAAc,OAkCP;AACd,kGAnCuB,mCAAiB,OAmCvB;AAlCnB,4EAAoD;AAuBlD,4BAvBK,2BAAiB,CAuBL;AAtBnB,0DAAkC;AAuBhC,mBAvBK,kBAAQ,CAuBL;AAtBV,sHAA8F;AAuB5F,iDAvBK,gDAAsC,CAuBL;AAtBxC,8GAAsF;AAuBpF,6CAvBK,4CAAkC,CAuBL;AAtBpC,sHAA8F;AAuB5F,iDAvBK,gDAAsC,CAuBL;AAtBxC,4GAAoF;AAuBlF,4CAvBK,2CAAiC,CAuBL;AAtBnC,4GAAoF;AAuBlF,4CAvBK,2CAAiC,CAuBL;AAtBnC,kHAA0F;AAuBxF,+CAvBK,8CAAoC,CAuBL;AAtBtC,sFAA8D;AAuB5D,iCAvBK,gCAAsB,CAuBL;AAtBxB,oFAA4D;AAuB1D,gCAvBK,+BAAqB,CAuBL;AAtBvB,uEAAoE;AAyBlE,wGAzBO,iDAAuB,OAyBP;AAxBzB,+CAA4C;AAyB1C,4FAzBO,yBAAW,OAyBP"}

package/dist/cjs/utilities/math/polyline/isPointInsidePolyline3D.d.ts CHANGED Viewed

@@ -1,2 +1,4 @@
 import type { Types } from '@cornerstonejs/core';
-export declare function isPointInsidePolyline3D(point: Types.Point3, polyline: Types.Point3[]): boolean;
+export declare function isPointInsidePolyline3D(point: Types.Point3, polyline: Types.Point3[], options?: {
+    holes?: Types.Point3[][];
+}): boolean;

package/dist/cjs/utilities/math/polyline/isPointInsidePolyline3D.js CHANGED Viewed

@@ -5,30 +5,29 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.isPointInsidePolyline3D = void 0;
 const containsPoint_1 = __importDefault(require("./containsPoint"));
-function isPointInsidePolyline3D(point, polyline) {
-    let sharedDimensionIndex;
-    const testPoints = polyline.slice(0, 3);
-    for (let i = 0; i < 3; i++) {
-        if (testPoints.every((point, index, array) => point[i] === array[0][i])) {
-            sharedDimensionIndex = i;
-            break;
+const projectTo2D_1 = require("./projectTo2D");
+function isPointInsidePolyline3D(point, polyline, options = {}) {
+    const { sharedDimensionIndex, projectedPolyline } = (0, projectTo2D_1.projectTo2D)(polyline);
+    const { holes } = options;
+    const projectedHoles = [];
+    if (holes) {
+        for (let i = 0; i < holes.length; i++) {
+            const hole = holes[i];
+            const hole2D = [];
+            for (let j = 0; j < hole.length; j++) {
+                hole2D.push([
+                    hole[j][(sharedDimensionIndex + 1) % 3],
+                    hole[j][(sharedDimensionIndex + 2) % 3],
+                ]);
+            }
+            projectedHoles.push(hole2D);
         }
     }
-    if (sharedDimensionIndex === undefined) {
-        throw new Error('Cannot find a shared dimension index for polyline, probably oblique plane');
-    }
-    const points2D = [];
-    for (let i = 0; i < polyline.length; i++) {
-        points2D.push([
-            polyline[i][(sharedDimensionIndex + 1) % 3],
-            polyline[i][(sharedDimensionIndex + 2) % 3],
-        ]);
-    }
     const point2D = [
         point[(sharedDimensionIndex + 1) % 3],
         point[(sharedDimensionIndex + 2) % 3],
     ];
-    return (0, containsPoint_1.default)(points2D, point2D);
+    return (0, containsPoint_1.default)(projectedPolyline, point2D, { holes: projectedHoles });
 }
 exports.isPointInsidePolyline3D = isPointInsidePolyline3D;
 //# sourceMappingURL=isPointInsidePolyline3D.js.map

package/dist/cjs/utilities/math/polyline/isPointInsidePolyline3D.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"isPointInsidePolyline3D.js","sourceRoot":"","sources":["../../../../../src/utilities/math/polyline/isPointInsidePolyline3D.ts"],"names":[],"mappings":";;;;;;AACA,oEAA4C;AAC5C,+CAA4C;AAe5C,SAAgB,uBAAuB,CACrC,KAAmB,EACnB,QAAwB,EACxB,UAAwC,EAAE;IAE1C,MAAM,EAAE,oBAAoB,EAAE,iBAAiB,EAAE,GAAG,IAAA,yBAAW,EAAC,QAAQ,CAAC,CAAC;IAE1E,MAAM,EAAE,KAAK,EAAE,GAAG,OAAO,CAAC;IAC1B,MAAM,cAAc,GAAG,EAAsB,CAAC;IAE9C,IAAI,KAAK,EAAE;QACT,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,KAAK,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;YACrC,MAAM,IAAI,GAAG,KAAK,CAAC,CAAC,CAAC,CAAC;YACtB,MAAM,MAAM,GAAG,EAAoB,CAAC;YAEpC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,IAAI,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;gBACpC,MAAM,CAAC,IAAI,CAAC;oBACV,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,oBAAoB,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC;oBACvC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,oBAAoB,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC;iBACxC,CAAC,CAAC;aACJ;YAED,cAAc,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC;SAC7B;KACF;IAED,MAAM,OAAO,GAAG;QACd,KAAK,CAAC,CAAC,oBAAoB,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC;QACrC,KAAK,CAAC,CAAC,oBAAoB,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC;KACtB,CAAC;IAElB,OAAO,IAAA,uBAAa,EAAC,iBAAiB,EAAE,OAAO,EAAE,EAAE,KAAK,EAAE,cAAc,EAAE,CAAC,CAAC;AAC9E,CAAC;AAhCD,0DAgCC"}

package/dist/cjs/utilities/math/polyline/projectTo2D.d.ts ADDED Viewed

@@ -0,0 +1,5 @@
+import type { Types } from '@cornerstonejs/core';
+export declare function projectTo2D(polyline: Types.Point3[]): {
+    sharedDimensionIndex: any;
+    projectedPolyline: Types.Point2[];
+};

package/dist/cjs/utilities/math/polyline/projectTo2D.js ADDED Viewed

@@ -0,0 +1,30 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.projectTo2D = void 0;
+const core_1 = require("@cornerstonejs/core");
+const epsilon = 1e-6;
+function projectTo2D(polyline) {
+    let sharedDimensionIndex;
+    const testPoints = core_1.utilities.getRandomSampleFromArray(polyline, 50);
+    for (let i = 0; i < 3; i++) {
+        if (testPoints.every((point, index, array) => Math.abs(point[i] - array[0][i]) < epsilon)) {
+            sharedDimensionIndex = i;
+            break;
+        }
+    }
+    if (sharedDimensionIndex === undefined) {
+        throw new Error('Cannot find a shared dimension index for polyline, probably oblique plane');
+    }
+    const points2D = [];
+    const firstDim = (sharedDimensionIndex + 1) % 3;
+    const secondDim = (sharedDimensionIndex + 2) % 3;
+    for (let i = 0; i < polyline.length; i++) {
+        points2D.push([polyline[i][firstDim], polyline[i][secondDim]]);
+    }
+    return {
+        sharedDimensionIndex,
+        projectedPolyline: points2D,
+    };
+}
+exports.projectTo2D = projectTo2D;
+//# sourceMappingURL=projectTo2D.js.map

package/dist/cjs/utilities/math/polyline/projectTo2D.js.map ADDED Viewed

@@ -0,0 +1 @@

+ {"version":3,"file":"projectTo2D.js","sourceRoot":"","sources":["../../../../../src/utilities/math/polyline/projectTo2D.ts"],"names":[],"mappings":";;;AAAA,8CAAgD;AAGhD,MAAM,OAAO,GAAG,IAAI,CAAC;AASrB,SAAgB,WAAW,CAAC,QAAwB;IAIlD,IAAI,oBAAoB,CAAC;IAEzB,MAAM,UAAU,GAAG,gBAAS,CAAC,wBAAwB,CAAC,QAAQ,EAAE,EAAE,CAAC,CAAC;IAEpE,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,EAAE,CAAC,EAAE,EAAE;QAC1B,IACE,UAAU,CAAC,KAAK,CACd,CAAC,KAAK,EAAE,KAAK,EAAE,KAAK,EAAE,EAAE,CAAC,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,GAAG,OAAO,CACpE,EACD;YACA,oBAAoB,GAAG,CAAC,CAAC;YACzB,MAAM;SACP;KACF;IAED,IAAI,oBAAoB,KAAK,SAAS,EAAE;QACtC,MAAM,IAAI,KAAK,CACb,2EAA2E,CAC5E,CAAC;KACH;IAGD,MAAM,QAAQ,GAAG,EAAoB,CAAC;IAEtC,MAAM,QAAQ,GAAG,CAAC,oBAAoB,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC;IAChD,MAAM,SAAS,GAAG,CAAC,oBAAoB,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC;IAEjD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;QACxC,QAAQ,CAAC,IAAI,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,EAAE,QAAQ,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC;KAChE;IAED,OAAO;QACL,oBAAoB;QACpB,iBAAiB,EAAE,QAAQ;KAC5B,CAAC;AACJ,CAAC;AAvCD,kCAuCC"}

package/dist/cjs/utilities/voi/colorbar/ViewportColorbar.d.ts CHANGED Viewed

@@ -18,6 +18,7 @@ declare class ViewportColorbar extends Colorbar {
     private _stackNewImageCallback;
     private _imageVolumeModifiedCallback;
     private _viewportVOIModifiedCallback;
+    private _viewportColormapModifiedCallback;
     private _addCornerstoneEventListener;
 }
 export { ViewportColorbar as default, ViewportColorbar };

package/dist/cjs/utilities/voi/colorbar/ViewportColorbar.js CHANGED Viewed

@@ -47,6 +47,14 @@ class ViewportColorbar extends Colorbar_1.Colorbar {
             this.voiRange = voiRange;
             this.showAndAutoHideTicks();
         };
+        this._viewportColormapModifiedCallback = (evt) => {
+            const { viewportId, colormap } = evt.detail;
+            const { viewport } = this.enabledElement;
+            if (viewportId !== viewport.id) {
+                return;
+            }
+            this.activeColormapName = colormap.name;
+        };
         this._element = element;
         this._volumeId = volumeId;
         this._addCornerstoneEventListener();
@@ -119,6 +127,7 @@ class ViewportColorbar extends Colorbar_1.Colorbar {
         core_1.eventTarget.addEventListener(Events.IMAGE_VOLUME_MODIFIED, this._imageVolumeModifiedCallback);
         element.addEventListener(Events.STACK_NEW_IMAGE, this._stackNewImageCallback);
         element.addEventListener(Events.VOI_MODIFIED, this._viewportVOIModifiedCallback);
+        element.addEventListener(Events.COLORMAP_MODIFIED, this._viewportColormapModifiedCallback);
     }
 }
 exports.default = ViewportColorbar;

package/dist/cjs/utilities/voi/colorbar/ViewportColorbar.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"ViewportColorbar.js","sourceRoot":"","sources":["../../../../../src/utilities/voi/colorbar/ViewportColorbar.ts"],"names":[],"mappings":";;;AAAA,8CAQ6B;AAC7B,yCAAsC;AAEtC,+DAA4D;AAE5D,MAAM,EAAE,MAAM,EAAE,GAAG,YAAK,CAAC;AACzB,MAAM,iBAAiB,GAAG,EAAE,KAAK,EAAE,CAAC,IAAI,EAAE,KAAK,EAAE,IAAI,EAAE,CAAC;AAKxD,MAAM,gBAAiB,SAAQ,mBAAQ;IAOrC,YAAY,KAA4B;QACtC,MAAM,EAAE,OAAO,EAAE,QAAQ,EAAE,GAAG,KAAK,CAAC;QACpC,MAAM,UAAU,GAAG,gBAAgB,CAAC,cAAc,CAAC,OAAO,EAAE,QAAQ,CAAC,CAAC;QACtE,MAAM,QAAQ,GAAG,gBAAgB,CAAC,YAAY,CAAC,OAAO,EAAE,QAAQ,CAAC,CAAC;QAElE,KAAK,iCAAM,KAAK,KAAE,UAAU,EAAE,QAAQ,IAAG,CAAC;QAqFpC,kBAAa,GAAG,GAAG,EAAE;YAG3B,IAAI,IAAI,CAAC,mBAAmB,EAAE;gBAC5B,OAAO;aACR;YAED,MAAM,QAAQ,GAAG,IAAI,CAAC,cAAc,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC;YAElD,IAAI,QAAQ,IAAI,CAAC,EAAE;gBACjB,IAAI,CAAC,SAAS,EAAE,CAAC;aAClB;iBAAM;gBACL,IAAI,CAAC,mBAAmB,GAAG,MAAM,CAAC,UAAU,CAAC,GAAG,EAAE;oBAEhD,IAAI,CAAC,mBAAmB,GAAG,CAAC,CAAC;oBAC7B,IAAI,CAAC,aAAa,EAAE,CAAC;gBACvB,CAAC,EAAE,QAAQ,CAAC,CAAC;aACd;QACH,CAAC,CAAC;QAQM,2BAAsB,GAAG,GAAG,EAAE;YACpC,IAAI,CAAC,UAAU,GAAG,gBAAgB,CAAC,cAAc,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC;QACnE,CAAC,CAAC;QAEM,iCAA4B,GAAG,CACrC,GAA8C,EAC9C,EAAE;YACF,MAAM,EAAE,QAAQ,EAAE,GAAG,GAAG,CAAC,MAAM,CAAC,WAAW,CAAC;YAE5C,IAAI,QAAQ,KAAK,IAAI,CAAC,SAAS,EAAE;gBAC/B,OAAO;aACR;YAED,MAAM,EAAE,QAAQ,EAAE,OAAO,EAAE,GAAG,IAAI,CAAC;YACnC,IAAI,CAAC,UAAU,GAAG,gBAAgB,CAAC,cAAc,CAAC,OAAO,EAAE,QAAQ,CAAC,CAAC;QACvE,CAAC,CAAC;QAEM,iCAA4B,GAAG,CACrC,GAAsC,EACtC,EAAE;YACF,MAAM,EAAE,UAAU,EAAE,QAAQ,EAAE,KAAK,EAAE,QAAQ,EAAE,GAAG,GAAG,CAAC,MAAM,CAAC;YAC7D,MAAM,EAAE,QAAQ,EAAE,GAAG,IAAI,CAAC,cAAc,CAAC;YAEzC,IAAI,UAAU,KAAK,QAAQ,CAAC,EAAE,IAAI,QAAQ,KAAK,IAAI,CAAC,SAAS,EAAE;gBAC7D,OAAO;aACR;YAED,IAAI,CAAC,QAAQ,GAAG,QAAQ,CAAC;YACzB,IAAI,CAAC,oBAAoB,EAAE,CAAC;QAC9B,CAAC,CAAC;QAEM,sCAAiC,GAAG,CAC1C,GAA2C,EAC3C,EAAE;YACF,MAAM,EAAE,UAAU,EAAE,QAAQ,EAAE,GAAG,GAAG,CAAC,MAAM,CAAC;YAC5C,MAAM,EAAE,QAAQ,EAAE,GAAG,IAAI,CAAC,cAAc,CAAC;YAEzC,IAAI,UAAU,KAAK,QAAQ,CAAC,EAAE,EAAE;gBAC9B,OAAO;aACR;YAED,IAAI,CAAC,kBAAkB,GAAG,QAAQ,CAAC,IAAI,CAAC;QAC1C,CAAC,CAAC;QAvJA,IAAI,CAAC,QAAQ,GAAG,OAAO,CAAC;QACxB,IAAI,CAAC,SAAS,GAAG,QAAQ,CAAC;QAE1B,IAAI,CAAC,4BAA4B,EAAE,CAAC;IACtC,CAAC;IAED,IAAW,OAAO;QAChB,OAAO,IAAI,CAAC,QAAQ,CAAC;IACvB,CAAC;IAED,IAAW,cAAc;QACvB,OAAO,IAAA,wBAAiB,EAAC,IAAI,CAAC,QAAQ,CAAC,CAAC;IAC1C,CAAC;IAES,iBAAiB;QACzB,MAAM,EAAE,QAAQ,EAAE,GAAG,IAAI,CAAC,cAAc,CAAC;QACzC,OAAO,IAAA,qCAAiB,EAAC,QAAQ,EAAE,IAAI,CAAC,SAAS,CAAC,CAAC;IACrD,CAAC;IAES,WAAW,CAAC,QAA0B;QAC9C,KAAK,CAAC,WAAW,CAAC,QAAQ,CAAC,CAAC;QAE5B,MAAM,EAAE,QAAQ,EAAE,GAAG,IAAI,CAAC,cAAc,CAAC;QAEzC,IAAI,QAAQ,YAAY,oBAAa,EAAE;YACrC,QAAQ,CAAC,aAAa,CAAC;gBACrB,QAAQ,EAAE,QAAQ;aACnB,CAAC,CAAC;YACH,QAAQ,CAAC,MAAM,EAAE,CAAC;SACnB;aAAM,IAAI,QAAQ,YAAY,qBAAc,EAAE;YAC7C,MAAM,EAAE,SAAS,EAAE,QAAQ,EAAE,GAAG,IAAI,CAAC;YACrC,MAAM,4BAA4B,GAAG,gBAAS,CAAC,wBAAwB,CACrE,QAAQ,EACR,QAAQ,CAAC,iBAAiB,CAC3B,CAAC;YAEF,QAAQ,CAAC,aAAa,CAAC,EAAE,QAAQ,EAAE,EAAE,QAAQ,CAAC,CAAC;YAC/C,4BAA4B,CAAC,OAAO,CAAC,CAAC,EAAE,EAAE,EAAE,CAAC,EAAE,CAAC,MAAM,EAAE,CAAC,CAAC;SAC3D;IACH,CAAC;IAEO,MAAM,CAAC,cAAc,CAAC,OAAO,EAAE,QAAS;QAC9C,MAAM,cAAc,GAAG,IAAA,wBAAiB,EAAC,OAAO,CAAC,CAAC;QAClD,MAAM,EAAE,QAAQ,EAAE,GAAG,cAAc,CAAC;QAEpC,MAAM,KAAK,GAAG,QAAQ;YACpB,CAAC,CAAC,QAAQ,CAAC,QAAQ,CAAC,QAAQ,CAAC;YAC7B,CAAC,CAAC,QAAQ,CAAC,eAAe,EAAE,CAAC;QAE/B,IAAI,CAAC,KAAK,EAAE;YACV,OAAO,iBAAiB,CAAC;SAC1B;QAED,MAAM,SAAS,GAAG,KAAK,CAAC,KAAK,CAAC,SAAS,EAAE,CAAC,YAAY,EAAE,CAAC;QACzD,MAAM,UAAU,GAAG,SAAS,CAAC,YAAY,EAAE,CAAC,UAAU,EAAE,CAAC,QAAQ,EAAE,CAAC;QAEpE,OAAO,UAAU,CAAC,CAAC,CAAC,KAAK,CAAC,IAAI,UAAU,CAAC,CAAC,CAAC,KAAK,CAAC;YAC/C,CAAC,CAAC,iBAAiB;YACnB,CAAC,CAAC,EAAE,KAAK,EAAE,UAAU,CAAC,CAAC,CAAC,EAAE,KAAK,EAAE,UAAU,CAAC,CAAC,CAAC,EAAE,CAAC;IACrD,CAAC;IAEO,MAAM,CAAC,YAAY,CAAC,OAAO,EAAE,QAAQ;QAC3C,MAAM,cAAc,GAAG,IAAA,wBAAiB,EAAC,OAAO,CAAC,CAAC;QAClD,MAAM,EAAE,QAAQ,EAAE,GAAG,cAAc,CAAC;QAEpC,MAAM,WAAW,GAAG,QAAQ;YAC1B,CAAC,CAAC,QAAQ,CAAC,QAAQ,CAAC,QAAQ,CAAC;YAC7B,CAAC,CAAC,QAAQ,CAAC,eAAe,EAAE,CAAC;QAE/B,IAAI,CAAC,WAAW,IAAI,CAAC,gBAAS,CAAC,YAAY,CAAC,WAAW,CAAC,EAAE;YACxD,OAAO,iBAAiB,CAAC;SAC1B;QAED,MAAM,QAAQ,GAAI,WAAW,CAAC,KAA0B;aACrD,WAAW,EAAE;aACb,sBAAsB,CAAC,CAAC,CAAC;aACzB,QAAQ,EAAE,CAAC;QAEd,OAAO,QAAQ,CAAC,CAAC,CAAC,KAAK,CAAC,IAAI,QAAQ,CAAC,CAAC,CAAC,KAAK,CAAC;YAC3C,CAAC,CAAC,iBAAiB;YACnB,CAAC,CAAC,EAAE,KAAK,EAAE,QAAQ,CAAC,CAAC,CAAC,EAAE,KAAK,EAAE,QAAQ,CAAC,CAAC,CAAC,EAAE,CAAC;IACjD,CAAC;IAsBO,oBAAoB,CAAC,QAAQ,GAAG,IAAI;QAC1C,IAAI,CAAC,cAAc,GAAG,IAAI,CAAC,GAAG,EAAE,GAAG,QAAQ,CAAC;QAC5C,IAAI,CAAC,SAAS,EAAE,CAAC;QACjB,IAAI,CAAC,aAAa,EAAE,CAAC;IACvB,CAAC;IA8CO,4BAA4B;QAClC,MAAM,EAAE,QAAQ,EAAE,OAAO,EAAE,GAAG,IAAI,CAAC;QAEnC,kBAAW,CAAC,gBAAgB,CAC1B,MAAM,CAAC,qBAAqB,EAC5B,IAAI,CAAC,4BAA4B,CAClC,CAAC;QAEF,OAAO,CAAC,gBAAgB,CACtB,MAAM,CAAC,eAAe,EACtB,IAAI,CAAC,sBAAsB,CAC5B,CAAC;QAEF,OAAO,CAAC,gBAAgB,CACtB,MAAM,CAAC,YAAY,EACnB,IAAI,CAAC,4BAA6C,CACnD,CAAC;QAEF,OAAO,CAAC,gBAAgB,CACtB,MAAM,CAAC,iBAAiB,EACxB,IAAI,CAAC,iCAAkD,CACxD,CAAC;IACJ,CAAC;CACF;AAE4B,mCAAO;AAAE,4CAAgB"}

package/dist/cjs/workers/polySegConverters.js CHANGED Viewed

@@ -95,7 +95,11 @@ const polySegConverters = {
             for (const index of segmentIndices) {
                 const annotations = annotationUIDsInSegmentMap.get(index);
                 for (const annotation of annotations) {
-                    const bounds = (0, boundingBox_1.getBoundingBoxAroundShapeWorld)(annotation.data.contour.polyline);
+                    if (!annotation.polyline) {
+                        continue;
+                    }
+                    const { polyline, holesPolyline } = annotation;
+                    const bounds = (0, boundingBox_1.getBoundingBoxAroundShapeWorld)(polyline);
                     const [iMin, jMin, kMin] = core_1.utilities.transformWorldToIndex(imageData, [
                         bounds[0][0],
                         bounds[1][0],
@@ -106,8 +110,19 @@ const polySegConverters = {
                         bounds[1][1],
                         bounds[2][1],
                     ]);
+                    const { projectedPolyline, sharedDimensionIndex } = (0, polyline_1.projectTo2D)(polyline);
+                    const holes = holesPolyline === null || holesPolyline === void 0 ? void 0 : holesPolyline.map((hole) => {
+                        const { projectedPolyline: projectedHole } = (0, polyline_1.projectTo2D)(hole);
+                        return projectedHole;
+                    });
+                    const firstDim = (sharedDimensionIndex + 1) % 3;
+                    const secondDim = (sharedDimensionIndex + 2) % 3;
                     (0, utilities_1.pointInShapeCallback)(imageData, (pointLPS) => {
-                        return (0, polyline_1.isPointInsidePolyline3D)(pointLPS, annotation.data.contour.polyline);
+                        const point2D = [pointLPS[firstDim], pointLPS[secondDim]];
+                        const isInside = (0, polyline_1.containsPoint)(projectedPolyline, point2D, {
+                            holes,
+                        });
+                        return isInside;
                     }, ({ pointIJK }) => {
                         segmentationVoxelManager.setAtIJKPoint(pointIJK, index);
                     }, [
@@ -149,11 +164,11 @@ const polySegConverters = {
             for (const index of segmentIndices) {
                 const annotations = annotationUIDsInSegmentMap.get(index);
                 for (const annotation of annotations) {
-                    if (!(annotation === null || annotation === void 0 ? void 0 : annotation.data)) {
+                    if (!annotation.polyline) {
                         continue;
                     }
-                    const bounds = (0, boundingBox_1.getBoundingBoxAroundShapeWorld)(annotation.data.contour.polyline);
-                    const { referencedImageId } = annotation.metadata;
+                    const { polyline, holesPolyline, referencedImageId } = annotation;
+                    const bounds = (0, boundingBox_1.getBoundingBoxAroundShapeWorld)(polyline);
                     const { manager: segmentationVoxelManager, imageData } = segmentationVoxelManagers.get(referencedImageId);
                     const [iMin, jMin, kMin] = core_1.utilities.transformWorldToIndex(imageData, [
                         bounds[0][0],
@@ -165,8 +180,19 @@ const polySegConverters = {
                         bounds[1][1],
                         bounds[2][1],
                     ]);
+                    const { projectedPolyline, sharedDimensionIndex } = (0, polyline_1.projectTo2D)(polyline);
+                    const holes = holesPolyline === null || holesPolyline === void 0 ? void 0 : holesPolyline.map((hole) => {
+                        const { projectedPolyline: projectedHole } = (0, polyline_1.projectTo2D)(hole);
+                        return projectedHole;
+                    });
+                    const firstDim = (sharedDimensionIndex + 1) % 3;
+                    const secondDim = (sharedDimensionIndex + 2) % 3;
                     (0, utilities_1.pointInShapeCallback)(imageData, (pointLPS) => {
-                        return (0, polyline_1.isPointInsidePolyline3D)(pointLPS, annotation.data.contour.polyline);
+                        const point2D = [pointLPS[firstDim], pointLPS[secondDim]];
+                        const isInside = (0, polyline_1.containsPoint)(projectedPolyline, point2D, {
+                            holes,
+                        });
+                        return isInside;
                     }, ({ pointIJK }) => {
                         segmentationVoxelManager.setAtIJKPoint(pointIJK, index);
                     }, [

package/dist/cjs/workers/polySegConverters.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/convertContourToLabelmap.js CHANGED Viewed

@@ -131,9 +131,20 @@ function _getAnnotationMapFromSegmentation(contourRepresentationData, options =
     const annotationUIDsInSegmentMap = new Map();
     segmentIndices.forEach((index) => {
         const annotationUIDsInSegment = annotationMap.get(index);
-        const annotations = Array.from(annotationUIDsInSegment).map((uid) => {
+        let uids = Array.from(annotationUIDsInSegment);
+        uids = uids.filter((uid) => !getAnnotation(uid).parentAnnotationUID);
+        const annotations = uids.map((uid) => {
             const annotation = getAnnotation(uid);
-            return annotation;
+            const hasChildAnnotations = annotation.childAnnotationUIDs?.length;
+            return {
+                polyline: annotation.data.contour.polyline,
+                referencedImageId: annotation.metadata.referencedImageId,
+                holesPolyline: hasChildAnnotations &&
+                    annotation.childAnnotationUIDs.map((childUID) => {
+                        const childAnnotation = getAnnotation(childUID);
+                        return childAnnotation.data.contour.polyline;
+                    }),
+            };
         });
         annotationUIDsInSegmentMap.set(index, annotations);
     });

package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/convertContourToLabelmap.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/labelmapComputationStrategies.js CHANGED Viewed

@@ -44,21 +44,14 @@ async function computeLabelmapFromContourSegmentation(segmentationId, options =
         : getUniqueSegmentIndices(segmentationId);
     const segmentation = getSegmentation(segmentationId);
     const representationData = segmentation.representationData.CONTOUR;
-    let result;
-    if (isVolume) {
-        result = await convertContourToVolumeLabelmap(representationData, {
-            segmentIndices,
-            segmentationRepresentationUID: options.segmentationRepresentationUID,
-            viewport: options.viewport,
-        });
-    }
-    else {
-        result = await convertContourToStackLabelmap(representationData, {
-            segmentIndices,
-            segmentationRepresentationUID: options.segmentationRepresentationUID,
-            viewport: options.viewport,
-        });
-    }
+    const convertFunction = isVolume
+        ? convertContourToVolumeLabelmap
+        : convertContourToStackLabelmap;
+    const result = await convertFunction(representationData, {
+        segmentIndices,
+        segmentationRepresentationUID: options.segmentationRepresentationUID,
+        viewport: options.viewport,
+    });
     return result;
 }
 async function computeLabelmapFromSurfaceSegmentation(segmentationId, options = {}) {