@cornerstonejs/tools 1.55.0 → 1.56.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/cjs/eventListeners/segmentation/imageChangeEventListener.js +15 -7
- package/dist/cjs/eventListeners/segmentation/imageChangeEventListener.js.map +1 -1
- package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/computeAndAddLabelmapRepresentation.js +1 -1
- package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/computeAndAddLabelmapRepresentation.js.map +1 -1
- package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.js +2 -1
- package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.js.map +1 -1
- package/dist/cjs/tools/segmentation/BrushTool.js +1 -1
- package/dist/cjs/tools/segmentation/BrushTool.js.map +1 -1
- package/dist/cjs/tools/segmentation/strategies/BrushStrategy.d.ts +3 -2
- package/dist/cjs/tools/segmentation/strategies/BrushStrategy.js +11 -4
- package/dist/cjs/tools/segmentation/strategies/BrushStrategy.js.map +1 -1
- package/dist/cjs/tools/segmentation/strategies/compositions/dynamicThreshold.js +9 -3
- package/dist/cjs/tools/segmentation/strategies/compositions/dynamicThreshold.js.map +1 -1
- package/dist/cjs/tools/segmentation/strategies/compositions/islandRemoval.js +1 -1
- package/dist/cjs/tools/segmentation/strategies/compositions/islandRemoval.js.map +1 -1
- package/dist/cjs/tools/segmentation/strategies/compositions/threshold.js +6 -2
- package/dist/cjs/tools/segmentation/strategies/compositions/threshold.js.map +1 -1
- package/dist/cjs/tools/segmentation/strategies/utils/getStrategyData.d.ts +2 -3
- package/dist/cjs/tools/segmentation/strategies/utils/getStrategyData.js +21 -6
- package/dist/cjs/tools/segmentation/strategies/utils/getStrategyData.js.map +1 -1
- package/dist/cjs/utilities/pointInShapeCallback.js +3 -1
- package/dist/cjs/utilities/pointInShapeCallback.js.map +1 -1
- package/dist/cjs/utilities/segmentation/floodFill.js +16 -22
- package/dist/cjs/utilities/segmentation/floodFill.js.map +1 -1
- package/dist/cjs/utilities/segmentation/getSegmentAtLabelmapBorder.js +3 -2
- package/dist/cjs/utilities/segmentation/getSegmentAtLabelmapBorder.js.map +1 -1
- package/dist/cjs/utilities/segmentation/getSegmentAtWorldPoint.js +3 -2
- package/dist/cjs/utilities/segmentation/getSegmentAtWorldPoint.js.map +1 -1
- package/dist/esm/eventListeners/segmentation/imageChangeEventListener.js +16 -8
- package/dist/esm/eventListeners/segmentation/imageChangeEventListener.js.map +1 -1
- package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/computeAndAddLabelmapRepresentation.js +1 -1
- package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/computeAndAddLabelmapRepresentation.js.map +1 -1
- package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.js +2 -1
- package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.js.map +1 -1
- package/dist/esm/tools/segmentation/BrushTool.js +1 -1
- package/dist/esm/tools/segmentation/BrushTool.js.map +1 -1
- package/dist/esm/tools/segmentation/strategies/BrushStrategy.js +10 -3
- package/dist/esm/tools/segmentation/strategies/BrushStrategy.js.map +1 -1
- package/dist/esm/tools/segmentation/strategies/compositions/dynamicThreshold.js +9 -3
- package/dist/esm/tools/segmentation/strategies/compositions/dynamicThreshold.js.map +1 -1
- package/dist/esm/tools/segmentation/strategies/compositions/islandRemoval.js +1 -1
- package/dist/esm/tools/segmentation/strategies/compositions/islandRemoval.js.map +1 -1
- package/dist/esm/tools/segmentation/strategies/compositions/threshold.js +6 -2
- package/dist/esm/tools/segmentation/strategies/compositions/threshold.js.map +1 -1
- package/dist/esm/tools/segmentation/strategies/utils/getStrategyData.js +21 -6
- package/dist/esm/tools/segmentation/strategies/utils/getStrategyData.js.map +1 -1
- package/dist/esm/utilities/pointInShapeCallback.js +3 -1
- package/dist/esm/utilities/pointInShapeCallback.js.map +1 -1
- package/dist/esm/utilities/segmentation/floodFill.js +16 -22
- package/dist/esm/utilities/segmentation/floodFill.js.map +1 -1
- package/dist/esm/utilities/segmentation/getSegmentAtLabelmapBorder.js +3 -2
- package/dist/esm/utilities/segmentation/getSegmentAtLabelmapBorder.js.map +1 -1
- package/dist/esm/utilities/segmentation/getSegmentAtWorldPoint.js +3 -2
- package/dist/esm/utilities/segmentation/getSegmentAtWorldPoint.js.map +1 -1
- package/dist/types/eventListeners/segmentation/imageChangeEventListener.d.ts.map +1 -1
- package/dist/types/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.d.ts.map +1 -1
- package/dist/types/tools/segmentation/strategies/BrushStrategy.d.ts +3 -2
- package/dist/types/tools/segmentation/strategies/BrushStrategy.d.ts.map +1 -1
- package/dist/types/tools/segmentation/strategies/compositions/dynamicThreshold.d.ts.map +1 -1
- package/dist/types/tools/segmentation/strategies/compositions/islandRemoval.d.ts.map +1 -1
- package/dist/types/tools/segmentation/strategies/compositions/threshold.d.ts.map +1 -1
- package/dist/types/tools/segmentation/strategies/utils/getStrategyData.d.ts +2 -3
- package/dist/types/tools/segmentation/strategies/utils/getStrategyData.d.ts.map +1 -1
- package/dist/types/utilities/pointInShapeCallback.d.ts.map +1 -1
- package/dist/types/utilities/segmentation/floodFill.d.ts.map +1 -1
- package/dist/types/utilities/segmentation/getSegmentAtLabelmapBorder.d.ts.map +1 -1
- package/dist/types/utilities/segmentation/getSegmentAtWorldPoint.d.ts.map +1 -1
- package/dist/umd/985.index.js +1 -1
- package/dist/umd/985.index.js.map +1 -1
- package/dist/umd/index.js +1 -1
- package/dist/umd/index.js.map +1 -1
- package/package.json +7 -3
- package/src/eventListeners/segmentation/imageChangeEventListener.ts +28 -13
- package/src/stateManagement/segmentation/polySeg/Labelmap/computeAndAddLabelmapRepresentation.ts +1 -1
- package/src/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.ts +3 -1
- package/src/tools/segmentation/BrushTool.ts +1 -1
- package/src/tools/segmentation/strategies/BrushStrategy.ts +25 -4
- package/src/tools/segmentation/strategies/compositions/dynamicThreshold.ts +12 -2
- package/src/tools/segmentation/strategies/compositions/islandRemoval.ts +1 -2
- package/src/tools/segmentation/strategies/compositions/threshold.ts +8 -6
- package/src/tools/segmentation/strategies/utils/getStrategyData.ts +20 -5
- package/src/utilities/pointInShapeCallback.ts +2 -0
- package/src/utilities/segmentation/floodFill.ts +44 -31
- package/src/utilities/segmentation/getSegmentAtLabelmapBorder.ts +6 -5
- package/src/utilities/segmentation/getSegmentAtWorldPoint.ts +6 -5
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@@ -36,17 +36,13 @@ const stackVolumeCheck_1 = require("../../tools/segmentation/strategies/utils/st
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const triggerSegmentationRender_1 = __importDefault(require("../../utilities/segmentation/triggerSegmentationRender"));
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const enable = function (element) {
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const { viewport } = (0, core_1.getEnabledElement)(element);
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if (
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if (viewport instanceof core_1.BaseVolumeViewport) {
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return;
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}
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element.addEventListener(core_1.Enums.Events.STACK_NEW_IMAGE, _imageChangeEventListener);
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element.addEventListener(core_1.Enums.Events.IMAGE_RENDERED, _imageChangeEventListener);
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};
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const disable = function (element) {
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const { viewport } = (0, core_1.getEnabledElement)(element);
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if (!(viewport instanceof core_1.StackViewport)) {
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return;
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}
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element.removeEventListener(core_1.Enums.Events.STACK_NEW_IMAGE, _imageChangeEventListener);
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element.removeEventListener(core_1.Enums.Events.IMAGE_RENDERED, _imageChangeEventListener);
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};
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@@ -103,6 +99,10 @@ function _imageChangeEventListener(evt) {
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const derivedImageId = imageIdReferenceMap.get(currentImageId);
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const segmentationImageData = segmentationActor.getMapper().getInputData();
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if (!derivedImageId) {
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if (segmentationImageData.setDerivedImage) {
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segmentationImageData.setDerivedImage(null);
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return;
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}
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const scalarArray = DataArray_1.default.newInstance({
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name: 'Pixels',
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numberOfComponents: 1,
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@@ -115,7 +115,10 @@ function _imageChangeEventListener(evt) {
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}
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const derivedImage = core_1.cache.getImage(derivedImageId);
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const { dimensions, spacing, direction } = viewport.getImageDataMetadata(derivedImage);
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const currentImage = core_1.cache.getImage(currentImageId)
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const currentImage = core_1.cache.getImage(currentImageId) ||
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{
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imageId: currentImageId,
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};
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const { origin: currentOrigin } = viewport.getImageDataMetadata(currentImage);
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const originToUse = currentOrigin;
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segmentationImageData.setOrigin(originToUse);
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@@ -146,7 +149,12 @@ function _imageChangeEventListener(evt) {
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(0, triggerSegmentationRender_1.default)(toolGroup.id);
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return;
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}
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if (segmentationImageData.setDerivedImage) {
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segmentationImageData.setDerivedImage(derivedImage);
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}
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else {
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core_1.utilities.updateVTKImageDataWithCornerstoneImage(segmentationImageData, derivedImage);
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}
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viewport.render();
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if (evt.type === core_1.Enums.Events.IMAGE_RENDERED) {
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viewport.element.removeEventListener(core_1.Enums.Events.IMAGE_RENDERED, _imageChangeEventListener);
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@@ -1 +1 @@
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-
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1
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@@ -5,7 +5,7 @@ const enums_1 = require("../../../../enums");
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const computeAndAddRepresentation_1 = require("../computeAndAddRepresentation");
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const labelmapComputationStrategies_1 = require("./labelmapComputationStrategies");
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function computeAndAddLabelmapRepresentation(segmentationId, options = {}) {
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return (0, computeAndAddRepresentation_1.computeAndAddRepresentation)(segmentationId, enums_1.SegmentationRepresentations.Labelmap, () => (0, labelmapComputationStrategies_1.computeLabelmapData)(segmentationId, options), () =>
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return (0, computeAndAddRepresentation_1.computeAndAddRepresentation)(segmentationId, enums_1.SegmentationRepresentations.Labelmap, () => (0, labelmapComputationStrategies_1.computeLabelmapData)(segmentationId, options), () => undefined);
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}
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exports.computeAndAddLabelmapRepresentation = computeAndAddLabelmapRepresentation;
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//# sourceMappingURL=computeAndAddLabelmapRepresentation.js.map
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@@ -1 +1 @@
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|
1
|
-
{"version":3,"file":"computeAndAddLabelmapRepresentation.js","sourceRoot":"","sources":["../../../../../../src/stateManagement/segmentation/polySeg/Labelmap/computeAndAddLabelmapRepresentation.ts"],"names":[],"mappings":";;;AAAA,6CAAgE;AAChE,gFAA6E;AAC7E,mFAAsE;AAYtE,SAAgB,mCAAmC,CACjD,cAAsB,EACtB,UAAoC,EAAE;IAEtC,OAAO,IAAA,yDAA2B,EAChC,cAAc,EACd,mCAA2B,CAAC,QAAQ,EACpC,GAAG,EAAE,CAAC,IAAA,mDAAmB,EAAC,cAAc,EAAE,OAAO,CAAC,EAClD,GAAG,EAAE,
|
|
1
|
+
{"version":3,"file":"computeAndAddLabelmapRepresentation.js","sourceRoot":"","sources":["../../../../../../src/stateManagement/segmentation/polySeg/Labelmap/computeAndAddLabelmapRepresentation.ts"],"names":[],"mappings":";;;AAAA,6CAAgE;AAChE,gFAA6E;AAC7E,mFAAsE;AAYtE,SAAgB,mCAAmC,CACjD,cAAsB,EACtB,UAAoC,EAAE;IAEtC,OAAO,IAAA,yDAA2B,EAChC,cAAc,EACd,mCAA2B,CAAC,QAAQ,EACpC,GAAG,EAAE,CAAC,IAAA,mDAAmB,EAAC,cAAc,EAAE,OAAO,CAAC,EAClD,GAAG,EAAE,CAAC,SAAS,CAChB,CAAC;AACJ,CAAC;AAVD,kFAUC"}
|
|
@@ -65,7 +65,8 @@ function convertSurfaceToVolumeLabelmap(surfaceRepresentationData, segmentationV
|
|
|
65
65
|
}
|
|
66
66
|
exports.convertSurfaceToVolumeLabelmap = convertSurfaceToVolumeLabelmap;
|
|
67
67
|
function convertSurfaceToStackLabelmap() {
|
|
68
|
-
return __awaiter(this, void 0, void 0, function* () {
|
|
68
|
+
return __awaiter(this, void 0, void 0, function* () {
|
|
69
|
+
});
|
|
69
70
|
}
|
|
70
71
|
exports.convertSurfaceToStackLabelmap = convertSurfaceToStackLabelmap;
|
|
71
72
|
//# sourceMappingURL=convertSurfaceToLabelmap.js.map
|
package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.js.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"convertSurfaceToLabelmap.js","sourceRoot":"","sources":["../../../../../../src/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.ts"],"names":[],"mappings":";;;;;;;;;;;;AAAA,8CAO6B;AAE7B,6CAAgD;AAEhD,MAAM,aAAa,GAAG,IAAA,0BAAmB,GAAE,CAAC;AAE5C,MAAM,qBAAqB,GAAG,CAAC,WAAW,EAAE,QAAQ,EAAE,EAAE;IACtD,IAAA,mBAAY,EAAC,WAAW,EAAE,YAAK,CAAC,MAAM,CAAC,mBAAmB,EAAE;QAC1D,QAAQ;QACR,IAAI,EAAE,mBAAW,CAAC,2BAA2B;KAC9C,CAAC,CAAC;AACL,CAAC,CAAC;AAEF,SAAsB,8BAA8B,CAClD,yBAAkD,EAClD,kBAAsC;;QAEtC,MAAM,EAAE,WAAW,EAAE,GAAG,yBAAyB,CAAC;QAClD,IAAI,CAAC,CAAA,WAAW,aAAX,WAAW,uBAAX,WAAW,CAAE,IAAI,CAAA,EAAE;YACtB,MAAM,IAAI,KAAK,CAAC,kDAAkD,CAAC,CAAC;SACrE;QAED,MAAM,YAAY,GAAG,IAAI,GAAG,EAM3B,CAAC;QAEF,WAAW,CAAC,OAAO,CAAC,CAAC,UAAU,EAAE,YAAY,EAAE,EAAE;YAC/C,MAAM,QAAQ,GAAG,YAAK,CAAC,WAAW,CAAC,UAAU,CAAC,CAAC;YAC/C,MAAM,YAAY,GAAG,QAAQ,CAAC,IAAsB,CAAC;YACrD,MAAM,MAAM,GAAG,YAAY,CAAC,SAAS,EAAE,CAAC;YACxC,MAAM,KAAK,GAAG,YAAY,CAAC,QAAQ,EAAE,CAAC;YAEtC,YAAY,CAAC,GAAG,CAAC,YAAY,EAAE;gBAC7B,MAAM;gBACN,KAAK;aACN,CAAC,CAAC;QACL,CAAC,CAAC,CAAC;QAEH,MAAM,EAAE,UAAU,EAAE,SAAS,EAAE,MAAM,EAAE,OAAO,EAAE,GAAG,kBAAkB,CAAC;QAEtE,qBAAqB,CAAC,kBAAW,EAAE,CAAC,CAAC,CAAC;QAEtC,MAAM,aAAa,GAAG,MAAM,aAAa,CAAC,WAAW,CACnD,SAAS,EACT,iCAAiC,EACjC;YACE,YAAY;YACZ,UAAU;YACV,OAAO;YACP,SAAS;YACT,MAAM;SACP,EACD;YACE,SAAS,EAAE;gBACT,CAAC,QAAQ,EAAE,EAAE;oBACX,qBAAqB,CAAC,kBAAW,EAAE,QAAQ,CAAC,CAAC;gBAC/C,CAAC;aACF;SACF,CACF,CAAC;QAEF,qBAAqB,CAAC,kBAAW,EAAE,GAAG,CAAC,CAAC;QAExC,kBAAkB,CAAC,SAAS;aACzB,YAAY,EAAE;aACd,UAAU,EAAE;aACZ,OAAO,CAAC,aAAa,CAAC,CAAC;QAC1B,kBAAkB,CAAC,SAAS,CAAC,QAAQ,EAAE,CAAC;QAGxC,kBAAkB,CAAC,QAAQ,EAAE,CAAC;QAE9B,OAAO;YACL,QAAQ,EAAE,kBAAkB,CAAC,QAAQ;SACtC,CAAC;IACJ,CAAC;CAAA;AAlED,wEAkEC;AAED,SAAsB,6BAA6B
|
|
1
|
+
{"version":3,"file":"convertSurfaceToLabelmap.js","sourceRoot":"","sources":["../../../../../../src/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.ts"],"names":[],"mappings":";;;;;;;;;;;;AAAA,8CAO6B;AAE7B,6CAAgD;AAEhD,MAAM,aAAa,GAAG,IAAA,0BAAmB,GAAE,CAAC;AAE5C,MAAM,qBAAqB,GAAG,CAAC,WAAW,EAAE,QAAQ,EAAE,EAAE;IACtD,IAAA,mBAAY,EAAC,WAAW,EAAE,YAAK,CAAC,MAAM,CAAC,mBAAmB,EAAE;QAC1D,QAAQ;QACR,IAAI,EAAE,mBAAW,CAAC,2BAA2B;KAC9C,CAAC,CAAC;AACL,CAAC,CAAC;AAEF,SAAsB,8BAA8B,CAClD,yBAAkD,EAClD,kBAAsC;;QAEtC,MAAM,EAAE,WAAW,EAAE,GAAG,yBAAyB,CAAC;QAClD,IAAI,CAAC,CAAA,WAAW,aAAX,WAAW,uBAAX,WAAW,CAAE,IAAI,CAAA,EAAE;YACtB,MAAM,IAAI,KAAK,CAAC,kDAAkD,CAAC,CAAC;SACrE;QAED,MAAM,YAAY,GAAG,IAAI,GAAG,EAM3B,CAAC;QAEF,WAAW,CAAC,OAAO,CAAC,CAAC,UAAU,EAAE,YAAY,EAAE,EAAE;YAC/C,MAAM,QAAQ,GAAG,YAAK,CAAC,WAAW,CAAC,UAAU,CAAC,CAAC;YAC/C,MAAM,YAAY,GAAG,QAAQ,CAAC,IAAsB,CAAC;YACrD,MAAM,MAAM,GAAG,YAAY,CAAC,SAAS,EAAE,CAAC;YACxC,MAAM,KAAK,GAAG,YAAY,CAAC,QAAQ,EAAE,CAAC;YAEtC,YAAY,CAAC,GAAG,CAAC,YAAY,EAAE;gBAC7B,MAAM;gBACN,KAAK;aACN,CAAC,CAAC;QACL,CAAC,CAAC,CAAC;QAEH,MAAM,EAAE,UAAU,EAAE,SAAS,EAAE,MAAM,EAAE,OAAO,EAAE,GAAG,kBAAkB,CAAC;QAEtE,qBAAqB,CAAC,kBAAW,EAAE,CAAC,CAAC,CAAC;QAEtC,MAAM,aAAa,GAAG,MAAM,aAAa,CAAC,WAAW,CACnD,SAAS,EACT,iCAAiC,EACjC;YACE,YAAY;YACZ,UAAU;YACV,OAAO;YACP,SAAS;YACT,MAAM;SACP,EACD;YACE,SAAS,EAAE;gBACT,CAAC,QAAQ,EAAE,EAAE;oBACX,qBAAqB,CAAC,kBAAW,EAAE,QAAQ,CAAC,CAAC;gBAC/C,CAAC;aACF;SACF,CACF,CAAC;QAEF,qBAAqB,CAAC,kBAAW,EAAE,GAAG,CAAC,CAAC;QAExC,kBAAkB,CAAC,SAAS;aACzB,YAAY,EAAE;aACd,UAAU,EAAE;aACZ,OAAO,CAAC,aAAa,CAAC,CAAC;QAC1B,kBAAkB,CAAC,SAAS,CAAC,QAAQ,EAAE,CAAC;QAGxC,kBAAkB,CAAC,QAAQ,EAAE,CAAC;QAE9B,OAAO;YACL,QAAQ,EAAE,kBAAkB,CAAC,QAAQ;SACtC,CAAC;IACJ,CAAC;CAAA;AAlED,wEAkEC;AAED,SAAsB,6BAA6B;;IAEnD,CAAC;CAAA;AAFD,sEAEC"}
|
|
@@ -155,7 +155,7 @@ class BrushTool extends base_1.BaseTool {
|
|
|
155
155
|
delta < dragMoveDistance) {
|
|
156
156
|
return;
|
|
157
157
|
}
|
|
158
|
-
this._previewData.preview = this.applyActiveStrategy(enabledElement, this.getOperationData());
|
|
158
|
+
this._previewData.preview = this.applyActiveStrategy(enabledElement, this.getOperationData(element));
|
|
159
159
|
this._previewData.element = element;
|
|
160
160
|
this._previewData.timerStart = Date.now() + dragTimeMs;
|
|
161
161
|
this._previewData.isDrag = true;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
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1
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+
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@@ -4,11 +4,12 @@ import { StrategyCallbacks } from '../../../enums';
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4
4
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import type { LabelmapToolOperationDataAny } from '../../../types/LabelmapToolOperationData';
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5
5
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import vtkImageData from '@kitware/vtk.js/Common/DataModel/ImageData';
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6
6
|
export declare type InitializedOperationData = LabelmapToolOperationDataAny & {
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7
|
+
operationName?: string;
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7
8
|
enabledElement: Types.IEnabledElement;
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|
8
9
|
centerIJK?: Types.Point3;
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|
9
10
|
centerWorld: Types.Point3;
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|
10
11
|
viewport: Types.IViewport;
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|
11
|
-
imageVoxelManager: csUtils.VoxelManager<number>;
|
|
12
|
+
imageVoxelManager: csUtils.VoxelManager<number> | csUtils.VoxelManager<Types.RGB>;
|
|
12
13
|
segmentationVoxelManager: csUtils.VoxelManager<number>;
|
|
13
14
|
segmentationImageData: vtkImageData;
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|
14
15
|
previewVoxelManager: csUtils.VoxelManager<number>;
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@@ -77,7 +78,7 @@ export default class BrushStrategy {
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|
77
78
|
protected _onInteractionStart: any[];
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|
78
79
|
constructor(name: any, ...initializers: Composition[]);
|
|
79
80
|
fill: (enabledElement: Types.IEnabledElement, operationData: LabelmapToolOperationDataAny) => any;
|
|
80
|
-
protected initialize(enabledElement: Types.IEnabledElement, operationData: LabelmapToolOperationDataAny): InitializedOperationData;
|
|
81
|
+
protected initialize(enabledElement: Types.IEnabledElement, operationData: LabelmapToolOperationDataAny, operationName?: string): InitializedOperationData;
|
|
81
82
|
onInteractionStart: (enabledElement: Types.IEnabledElement, operationData: LabelmapToolOperationDataAny) => void;
|
|
82
83
|
onInteractionEnd: (enabledElement: Types.IEnabledElement, operationData: LabelmapToolOperationDataAny) => void;
|
|
83
84
|
rejectPreview: (enabledElement: Types.IEnabledElement, operationData: LabelmapToolOperationDataAny) => void;
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@@ -16,7 +16,10 @@ class BrushStrategy {
|
|
|
16
16
|
this._fill = [];
|
|
17
17
|
this._onInteractionStart = [];
|
|
18
18
|
this.fill = (enabledElement, operationData) => {
|
|
19
|
-
const initializedData = this.initialize(enabledElement, operationData);
|
|
19
|
+
const initializedData = this.initialize(enabledElement, operationData, enums_1.StrategyCallbacks.Fill);
|
|
20
|
+
if (!initializedData) {
|
|
21
|
+
return;
|
|
22
|
+
}
|
|
20
23
|
const { strategySpecificConfiguration = {}, centerIJK } = initializedData;
|
|
21
24
|
if (core_1.utilities.isEqual(centerIJK, strategySpecificConfiguration.centerIJK)) {
|
|
22
25
|
return operationData.preview;
|
|
@@ -39,6 +42,9 @@ class BrushStrategy {
|
|
|
39
42
|
return;
|
|
40
43
|
}
|
|
41
44
|
const initializedData = this.initialize(enabledElement, operationData);
|
|
45
|
+
if (!initializedData) {
|
|
46
|
+
return;
|
|
47
|
+
}
|
|
42
48
|
this._onInteractionStart.forEach((func) => func.call(this, initializedData));
|
|
43
49
|
};
|
|
44
50
|
this.configurationName = name;
|
|
@@ -60,7 +66,7 @@ class BrushStrategy {
|
|
|
60
66
|
this.strategyFunction[key] = this[key];
|
|
61
67
|
}
|
|
62
68
|
}
|
|
63
|
-
initialize(enabledElement, operationData) {
|
|
69
|
+
initialize(enabledElement, operationData, operationName) {
|
|
64
70
|
var _a;
|
|
65
71
|
const { viewport } = enabledElement;
|
|
66
72
|
const data = (0, getStrategyData_1.getStrategyData)({ operationData, viewport });
|
|
@@ -84,7 +90,8 @@ class BrushStrategy {
|
|
|
84
90
|
VoxelManager.createHistoryVoxelManager(segmentationVoxelManager);
|
|
85
91
|
const previewEnabled = !!operationData.previewColors;
|
|
86
92
|
const previewSegmentIndex = previewEnabled ? 255 : undefined;
|
|
87
|
-
const initializedData = Object.assign(Object.assign({
|
|
93
|
+
const initializedData = Object.assign(Object.assign({ operationName,
|
|
94
|
+
previewSegmentIndex }, operationData), { enabledElement,
|
|
88
95
|
imageVoxelManager,
|
|
89
96
|
segmentationVoxelManager,
|
|
90
97
|
segmentationImageData,
|
|
@@ -115,7 +122,7 @@ function addListMethod(name, createInitialized) {
|
|
|
115
122
|
brushStrategy[listName].push(func);
|
|
116
123
|
brushStrategy[name] || (brushStrategy[name] = createInitialized
|
|
117
124
|
? (enabledElement, operationData) => {
|
|
118
|
-
const initializedData = brushStrategy[createInitialized](enabledElement, operationData);
|
|
125
|
+
const initializedData = brushStrategy[createInitialized](enabledElement, operationData, name);
|
|
119
126
|
brushStrategy[listName].forEach((func) => func.call(brushStrategy, initializedData));
|
|
120
127
|
}
|
|
121
128
|
: (operationData) => {
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"BrushStrategy.js","sourceRoot":"","sources":["../../../../../src/tools/segmentation/strategies/BrushStrategy.ts"],"names":[],"mappings":";;;;;AACA,8CAAkE;AAElE,+GAAkH;AAClH,kEAA0C;AAC1C,6DAA0D;AAC1D,+DAAgE;AAChE,0CAAmD;AAOnD,MAAM,EAAE,YAAY,EAAE,GAAG,gBAAO,CAAC;
|
|
1
|
+
{"version":3,"file":"BrushStrategy.js","sourceRoot":"","sources":["../../../../../src/tools/segmentation/strategies/BrushStrategy.ts"],"names":[],"mappings":";;;;;AACA,8CAAkE;AAElE,+GAAkH;AAClH,kEAA0C;AAC1C,6DAA0D;AAC1D,+DAAgE;AAChE,0CAAmD;AAOnD,MAAM,EAAE,YAAY,EAAE,GAAG,gBAAO,CAAC;AA8DjC,MAAqB,aAAa;IAkDhC,YAAY,IAAI,EAAE,GAAG,YAA2B;QALtC,gBAAW,GAAG,EAAE,CAAC;QACjB,UAAK,GAAG,EAAE,CAAC;QAEX,wBAAmB,GAAG,EAAE,CAAC;QA+B5B,SAAI,GAAG,CACZ,cAAqC,EACrC,aAA2C,EAC3C,EAAE;YACF,MAAM,eAAe,GAAG,IAAI,CAAC,UAAU,CACrC,cAAc,EACd,aAAa,EACb,yBAAiB,CAAC,IAAI,CACvB,CAAC;YAEF,IAAI,CAAC,eAAe,EAAE;gBAEpB,OAAO;aACR;YAED,MAAM,EAAE,6BAA6B,GAAG,EAAE,EAAE,SAAS,EAAE,GAAG,eAAe,CAAC;YAG1E,IAAI,gBAAO,CAAC,OAAO,CAAC,SAAS,EAAE,6BAA6B,CAAC,SAAS,CAAC,EAAE;gBACvE,OAAO,aAAa,CAAC,OAAO,CAAC;aAC9B;iBAAM;gBACL,6BAA6B,CAAC,SAAS,GAAG,SAAS,CAAC;aACrD;YAED,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,IAAI,EAAE,EAAE,CAAC,IAAI,CAAC,eAAe,CAAC,CAAC,CAAC;YAEpD,MAAM,EACJ,wBAAwB,EACxB,mBAAmB,EACnB,mBAAmB,GACpB,GAAG,eAAe,CAAC;YAEpB,IAAA,2DAA+B,EAC7B,eAAe,CAAC,cAAc,EAC9B,wBAAwB,CAAC,gBAAgB,EAAE,CAC5C,CAAC;YAGF,IAAI,CAAC,mBAAmB,IAAI,CAAC,mBAAmB,CAAC,cAAc,CAAC,IAAI,EAAE;gBACpE,OAAO,IAAI,CAAC;aACb;YAED,OAAO,eAAe,CAAC,OAAO,IAAI,eAAe,CAAC;QACpD,CAAC,CAAC;QAuEK,uBAAkB,GAAG,CAC1B,cAAqC,EACrC,aAA2C,EAC3C,EAAE;YACF,MAAM,EAAE,OAAO,EAAE,GAAG,aAAa,CAAC;YAGlC,IAAI,OAAO,aAAP,OAAO,uBAAP,OAAO,CAAE,kBAAkB,EAAE;gBAC/B,OAAO,CAAC,kBAAkB,GAAG,KAAK,CAAC;gBACnC,OAAO;aACR;YACD,MAAM,eAAe,GAAG,IAAI,CAAC,UAAU,CAAC,cAAc,EAAE,aAAa,CAAC,CAAC;YACvE,IAAI,CAAC,eAAe,EAAE;gBAEpB,OAAO;aACR;YACD,IAAI,CAAC,mBAAmB,CAAC,OAAO,CAAC,CAAC,IAAI,EAAE,EAAE,CACxC,IAAI,CAAC,IAAI,CAAC,IAAI,EAAE,eAAe,CAAC,CACjC,CAAC;QACJ,CAAC,CAAC;QAjKA,IAAI,CAAC,iBAAiB,GAAG,IAAI,CAAC;QAC9B,IAAI,CAAC,YAAY,GAAG,YAAY,CAAC;QACjC,YAAY,CAAC,OAAO,CAAC,CAAC,WAAW,EAAE,EAAE;YACnC,MAAM,MAAM,GACV,OAAO,WAAW,KAAK,UAAU,CAAC,CAAC,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC,WAAW,CAAC;YAClE,IAAI,CAAC,MAAM,EAAE;gBACX,OAAO;aACR;YACD,KAAK,MAAM,GAAG,IAAI,MAAM,EAAE;gBACxB,IAAI,CAAC,aAAa,CAAC,cAAc,CAAC,GAAG,CAAC,EAAE;oBACtC,MAAM,IAAI,KAAK,CAAC,eAAe,GAAG,sBAAsB,CAAC,CAAC;iBAC3D;gBACD,aAAa,CAAC,cAAc,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC;aACtD;QACH,CAAC,CAAC,CAAC;QACH,IAAI,CAAC,gBAAgB,GAAG,CAAC,cAAc,EAAE,aAAa,EAAE,EAAE,CACxD,IAAI,CAAC,IAAI,CAAC,cAAc,EAAE,aAAa,CAAC,CAAC;QAE3C,KAAK,MAAM,GAAG,IAAI,MAAM,CAAC,IAAI,CAAC,aAAa,CAAC,cAAc,CAAC,EAAE;YAC3D,IAAI,CAAC,gBAAgB,CAAC,GAAG,CAAC,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC;SACxC;IACH,CAAC;IAoDS,UAAU,CAClB,cAAqC,EACrC,aAA2C,EAC3C,aAAsB;;QAEtB,MAAM,EAAE,QAAQ,EAAE,GAAG,cAAc,CAAC;QACpC,MAAM,IAAI,GAAG,IAAA,iCAAe,EAAC,EAAE,aAAa,EAAE,QAAQ,EAAE,CAAC,CAAC;QAE1D,IAAI,CAAC,IAAI,EAAE;YACT,OAAO,CAAC,IAAI,CAAC,iCAAiC,CAAC,CAAC;YAChD,OAAO,aAAa,CAAC,OAAO,CAAC;SAC9B;QAED,IAAI,IAAA,uCAAoB,EAAC,aAAa,EAAE,QAAQ,CAAC,EAAE;YACjD,MAAM,EAAE,kBAAkB,EAAE,QAAQ,EAAE,GACpC,aAAgD,CAAC;YAEnD,MAAM,YAAY,GAAG,YAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,CAAC;YAE/C,IAAI,kBAAkB,EAAE;gBACtB,MAAM,WAAW,GAAG,YAAK,CAAC,SAAS,CAAC,kBAAkB,CAAC,CAAC;gBAExD,IACE,CAAC,gBAAO,CAAC,OAAO,CAAC,YAAY,CAAC,UAAU,EAAE,WAAW,CAAC,UAAU,CAAC;oBACjE,CAAC,gBAAO,CAAC,OAAO,CAAC,YAAY,CAAC,SAAS,EAAE,WAAW,CAAC,SAAS,CAAC,EAC/D;oBACA,MAAM,IAAI,KAAK,CACb,gGAAgG,CACjG,CAAC;iBACH;aACF;SACF;QAED,MAAM,EACJ,iBAAiB,EACjB,wBAAwB,EACxB,qBAAqB,GACtB,GAAG,IAAI,CAAC;QACT,MAAM,mBAAmB,GACvB,CAAA,MAAA,aAAa,CAAC,OAAO,0CAAE,mBAAmB;YAC1C,YAAY,CAAC,yBAAyB,CAAC,wBAAwB,CAAC,CAAC;QACnE,MAAM,cAAc,GAAG,CAAC,CAAC,aAAa,CAAC,aAAa,CAAC;QACrD,MAAM,mBAAmB,GAAG,cAAc,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,SAAS,CAAC;QAE7D,MAAM,eAAe,iCACnB,aAAa;YACb,mBAAmB,IAChB,aAAa,KAChB,cAAc;YACd,iBAAiB;YACjB,wBAAwB;YACxB,qBAAqB;YACrB,mBAAmB;YACnB,QAAQ,EAER,WAAW,EAAE,IAAI,EACjB,aAAa,EAAE,IAAI,GACpB,CAAC;QAEF,IAAI,CAAC,WAAW,CAAC,OAAO,CAAC,CAAC,IAAI,EAAE,EAAE,CAAC,IAAI,CAAC,eAAe,CAAC,CAAC,CAAC;QAE1D,OAAO,eAAe,CAAC;IACzB,CAAC;;AA1LH,gCA0QC;AArQe,0BAAY,GAAG,sBAAY,CAAC;AAEzB,4BAAc,GAAG;IAChC,CAAC,yBAAiB,CAAC,kBAAkB,CAAC,EAAE,aAAa,CACnD,yBAAiB,CAAC,kBAAkB,EACpC,yBAAiB,CAAC,UAAU,CAC7B;IACD,CAAC,yBAAiB,CAAC,gBAAgB,CAAC,EAAE,aAAa,CACjD,yBAAiB,CAAC,gBAAgB,EAClC,yBAAiB,CAAC,UAAU,CAC7B;IACD,CAAC,yBAAiB,CAAC,IAAI,CAAC,EAAE,aAAa,CAAC,yBAAiB,CAAC,IAAI,CAAC;IAC/D,CAAC,yBAAiB,CAAC,UAAU,CAAC,EAAE,aAAa,CAAC,yBAAiB,CAAC,UAAU,CAAC;IAC3E,CAAC,yBAAiB,CAAC,mBAAmB,CAAC,EAAE,kBAAkB,CACzD,yBAAiB,CAAC,mBAAmB,CACtC;IACD,CAAC,yBAAiB,CAAC,aAAa,CAAC,EAAE,aAAa,CAC9C,yBAAiB,CAAC,aAAa,EAC/B,yBAAiB,CAAC,UAAU,CAC7B;IACD,CAAC,yBAAiB,CAAC,aAAa,CAAC,EAAE,aAAa,CAC9C,yBAAiB,CAAC,aAAa,EAC/B,yBAAiB,CAAC,UAAU,CAC7B;IACD,CAAC,yBAAiB,CAAC,iBAAiB,CAAC,EAAE,kBAAkB,CACvD,yBAAiB,CAAC,iBAAiB,CACpC;IACD,CAAC,yBAAiB,CAAC,OAAO,CAAC,EAAE,kBAAkB,CAC7C,yBAAiB,CAAC,OAAO,EACzB,KAAK,CACN;IAGD,YAAY,EAAE,IAAI;CACnB,CAAC;AAwOJ,SAAS,aAAa,CAAC,IAAY,EAAE,iBAA0B;IAC7D,MAAM,QAAQ,GAAG,IAAI,IAAI,EAAE,CAAC;IAC5B,OAAO,CAAC,aAAa,EAAE,IAAI,EAAE,EAAE;QAC7B,aAAa,CAAC,QAAQ,MAAtB,aAAa,CAAC,QAAQ,IAAM,EAAE,EAAC;QAC/B,aAAa,CAAC,QAAQ,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;QACnC,aAAa,CAAC,IAAI,MAAlB,aAAa,CAAC,IAAI,IAAM,iBAAiB;YACvC,CAAC,CAAC,CAAC,cAAc,EAAE,aAAa,EAAE,EAAE;gBAChC,MAAM,eAAe,GAAG,aAAa,CAAC,iBAAiB,CAAC,CACtD,cAAc,EACd,aAAa,EACb,IAAI,CACL,CAAC;gBACF,aAAa,CAAC,QAAQ,CAAC,CAAC,OAAO,CAAC,CAAC,IAAI,EAAE,EAAE,CACvC,IAAI,CAAC,IAAI,CAAC,aAAa,EAAE,eAAe,CAAC,CAC1C,CAAC;YACJ,CAAC;YACH,CAAC,CAAC,CAAC,aAAa,EAAE,EAAE;gBAChB,aAAa,CAAC,QAAQ,CAAC,CAAC,OAAO,CAAC,CAAC,IAAI,EAAE,EAAE,CACvC,IAAI,CAAC,IAAI,CAAC,aAAa,EAAE,aAAa,CAAC,CACxC,CAAC;YACJ,CAAC,EAAC;IACR,CAAC,CAAC;AACJ,CAAC;AAKD,SAAS,kBAAkB,CAAC,IAAY,EAAE,aAAa,GAAG,IAAI;IAC5D,OAAO,CAAC,aAAa,EAAE,IAAI,EAAE,EAAE;QAC7B,IAAI,aAAa,CAAC,IAAI,CAAC,EAAE;YACvB,MAAM,IAAI,KAAK,CAAC,wBAAwB,IAAI,iBAAiB,CAAC,CAAC;SAChE;QACD,aAAa,CAAC,IAAI,CAAC,GAAG,aAAa;YACjC,CAAC,CAAC,IAAI;YACN,CAAC,CAAC,CAAC,cAAc,EAAE,aAAa,EAAE,EAAE;gBAGhC,aAAa,CAAC,cAAc,GAAG,cAAc,CAAC;gBAC9C,OAAO,IAAI,CAAC,IAAI,CAAC,aAAa,EAAE,aAAa,CAAC,CAAC;YACjD,CAAC,CAAC;IACR,CAAC,CAAC;AACJ,CAAC"}
|
|
@@ -3,14 +3,19 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
|
3
3
|
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
4
4
|
};
|
|
5
5
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
|
+
const gl_matrix_1 = require("gl-matrix");
|
|
6
7
|
const StrategyCallbacks_1 = __importDefault(require("../../../../enums/StrategyCallbacks"));
|
|
7
8
|
exports.default = {
|
|
8
9
|
[StrategyCallbacks_1.default.Initialize]: (operationData) => {
|
|
9
|
-
const { centerIJK, strategySpecificConfiguration, segmentationVoxelManager: segmentationVoxelManager, imageVoxelManager: imageVoxelManager, segmentIndex, } = operationData;
|
|
10
|
+
const { operationName, centerIJK, strategySpecificConfiguration, segmentationVoxelManager: segmentationVoxelManager, imageVoxelManager: imageVoxelManager, segmentIndex, } = operationData;
|
|
10
11
|
const { THRESHOLD } = strategySpecificConfiguration;
|
|
11
12
|
if (!(THRESHOLD === null || THRESHOLD === void 0 ? void 0 : THRESHOLD.isDynamic) || !centerIJK || !segmentIndex) {
|
|
12
13
|
return;
|
|
13
14
|
}
|
|
15
|
+
if (operationName === StrategyCallbacks_1.default.RejectPreview ||
|
|
16
|
+
operationName === StrategyCallbacks_1.default.OnInteractionEnd) {
|
|
17
|
+
return;
|
|
18
|
+
}
|
|
14
19
|
const { boundsIJK } = segmentationVoxelManager;
|
|
15
20
|
const { threshold: oldThreshold, dynamicRadius = 0 } = THRESHOLD;
|
|
16
21
|
const useDelta = oldThreshold ? 0 : dynamicRadius;
|
|
@@ -23,8 +28,9 @@ exports.default = {
|
|
|
23
28
|
});
|
|
24
29
|
const threshold = oldThreshold || [Infinity, -Infinity];
|
|
25
30
|
const callback = ({ value }) => {
|
|
26
|
-
|
|
27
|
-
threshold[
|
|
31
|
+
const gray = Array.isArray(value) ? gl_matrix_1.vec3.len(value) : value;
|
|
32
|
+
threshold[0] = Math.min(gray, threshold[0]);
|
|
33
|
+
threshold[1] = Math.max(gray, threshold[1]);
|
|
28
34
|
};
|
|
29
35
|
imageVoxelManager.forEach(callback, { boundsIJK: nestedBounds });
|
|
30
36
|
operationData.strategySpecificConfiguration.THRESHOLD.threshold = threshold;
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"dynamicThreshold.js","sourceRoot":"","sources":["../../../../../../src/tools/segmentation/strategies/compositions/dynamicThreshold.ts"],"names":[],"mappings":";;;;;
|
|
1
|
+
{"version":3,"file":"dynamicThreshold.js","sourceRoot":"","sources":["../../../../../../src/tools/segmentation/strategies/compositions/dynamicThreshold.ts"],"names":[],"mappings":";;;;;AAAA,yCAAiC;AAGjC,4FAAoE;AAUpE,kBAAe;IACb,CAAC,2BAAiB,CAAC,UAAU,CAAC,EAAE,CAAC,aAAuC,EAAE,EAAE;QAC1E,MAAM,EACJ,aAAa,EACb,SAAS,EACT,6BAA6B,EAC7B,wBAAwB,EAAE,wBAAwB,EAClD,iBAAiB,EAAE,iBAAiB,EACpC,YAAY,GACb,GAAG,aAAa,CAAC;QAClB,MAAM,EAAE,SAAS,EAAE,GAAG,6BAA6B,CAAC;QAEpD,IAAI,CAAC,CAAA,SAAS,aAAT,SAAS,uBAAT,SAAS,CAAE,SAAS,CAAA,IAAI,CAAC,SAAS,IAAI,CAAC,YAAY,EAAE;YACxD,OAAO;SACR;QACD,IACE,aAAa,KAAK,2BAAiB,CAAC,aAAa;YACjD,aAAa,KAAK,2BAAiB,CAAC,gBAAgB,EACpD;YACA,OAAO;SACR;QAED,MAAM,EAAE,SAAS,EAAE,GAAG,wBAAwB,CAAC;QAC/C,MAAM,EAAE,SAAS,EAAE,YAAY,EAAE,aAAa,GAAG,CAAC,EAAE,GAAG,SAAS,CAAC;QACjE,MAAM,QAAQ,GAAG,YAAY,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,aAAa,CAAC;QAClD,MAAM,YAAY,GAAG,SAAS,CAAC,GAAG,CAAC,CAAC,GAAG,EAAE,GAAG,EAAE,EAAE;YAC9C,MAAM,CAAC,GAAG,EAAE,GAAG,CAAC,GAAG,GAAG,CAAC;YACvB,OAAO;gBACL,IAAI,CAAC,GAAG,CAAC,GAAG,EAAE,SAAS,CAAC,GAAG,CAAC,GAAG,QAAQ,CAAC;gBACxC,IAAI,CAAC,GAAG,CAAC,GAAG,EAAE,SAAS,CAAC,GAAG,CAAC,GAAG,QAAQ,CAAC;aACzC,CAAC;QACJ,CAAC,CAAc,CAAC;QAEhB,MAAM,SAAS,GAAG,YAAY,IAAI,CAAC,QAAQ,EAAE,CAAC,QAAQ,CAAC,CAAC;QAExD,MAAM,QAAQ,GAAG,CAAC,EAAE,KAAK,EAAE,EAAE,EAAE;YAC7B,MAAM,IAAI,GAAG,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,gBAAI,CAAC,GAAG,CAAC,KAAY,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC;YACnE,SAAS,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,GAAG,CAAC,IAAI,EAAE,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC;YAC5C,SAAS,CAAC,CAAC,CAAC,GAAG,IAAI,CAAC,GAAG,CAAC,IAAI,EAAE,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC;QAC9C,CAAC,CAAC;QACF,iBAAiB,CAAC,OAAO,CAAC,QAAQ,EAAE,EAAE,SAAS,EAAE,YAAY,EAAE,CAAC,CAAC;QAEjE,aAAa,CAAC,6BAA6B,CAAC,SAAS,CAAC,SAAS,GAAG,SAAS,CAAC;IAC9E,CAAC;IAED,CAAC,2BAAiB,CAAC,kBAAkB,CAAC,EAAE,CACtC,aAAuC,EACvC,EAAE;;QACF,MAAM,EAAE,6BAA6B,EAAE,OAAO,EAAE,GAAG,aAAa,CAAC;QACjE,IAAI,CAAC,CAAA,MAAA,6BAA6B,aAA7B,6BAA6B,uBAA7B,6BAA6B,CAAE,SAAS,0CAAE,SAAS,CAAA,IAAI,CAAC,OAAO,EAAE;YACpE,OAAO;SACR;QACD,6BAA6B,CAAC,SAAS,CAAC,SAAS,GAAG,IAAI,CAAC;IAC3D,CAAC;CACF,CAAC"}
|
|
@@ -59,7 +59,7 @@ exports.default = {
|
|
|
59
59
|
floodedSet.add(index);
|
|
60
60
|
floodedCount++;
|
|
61
61
|
};
|
|
62
|
-
clickedPoints.forEach((clickedPoint
|
|
62
|
+
clickedPoints.forEach((clickedPoint) => {
|
|
63
63
|
if (getter(...clickedPoint) === 1) {
|
|
64
64
|
(0, floodFill_1.default)(getter, clickedPoint, {
|
|
65
65
|
onFlood,
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"islandRemoval.js","sourceRoot":"","sources":["../../../../../../src/tools/segmentation/strategies/compositions/islandRemoval.ts"],"names":[],"mappings":";;;;;AACA,6FAAqE;AACrE,kHAAqH;AACrH,4FAAoE;AASpE,kBAAe;IACb,CAAC,2BAAiB,CAAC,gBAAgB,CAAC,EAAE,CACpC,aAAuC,EACvC,EAAE;QACF,MAAM,EACJ,mBAAmB,EAAE,mBAAmB,EACxC,wBAAwB,EAAE,wBAAwB,EAClD,6BAA6B,EAC7B,mBAAmB,EACnB,YAAY,GACb,GAAG,aAAa,CAAC;QAElB,IAAI,CAAC,6BAA6B,CAAC,SAAS,IAAI,YAAY,KAAK,IAAI,EAAE;YACrE,OAAO;SACR;QAED,MAAM,aAAa,GAAG,mBAAmB,CAAC,SAAS,EAAE,CAAC;QACtD,IAAI,CAAC,CAAA,aAAa,aAAb,aAAa,uBAAb,aAAa,CAAE,MAAM,CAAA,EAAE;YAC1B,OAAO;SACR;QAED,IAAI,mBAAmB,KAAK,SAAS,EAAE;YACrC,OAAO;SACR;QAID,MAAM,SAAS,GAAG,mBAAmB;aAClC,YAAY,EAAE;aACd,GAAG,CAAC,CAAC,KAAK,EAAE,CAAC,EAAE,EAAE,CAAC;YACjB,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,GAAG,aAAa,CAAC,GAAG,CAAC,CAAC,KAAK,EAAE,EAAE,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC;YAC7D,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,GAAG,aAAa,CAAC,GAAG,CAAC,CAAC,KAAK,EAAE,EAAE,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC;SAC9D,CAAC,CAAC;QAEL,IAAI,SAAS,CAAC,IAAI,CAAC,CAAC,EAAE,EAAE,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,GAAG,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC,EAAE;YAEtD,OAAO;SACR;QAED,MAAM,UAAU,GAAG,IAAI,GAAG,EAAU,CAAC;QAErC,MAAM,MAAM,GAAG,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,EAAE;YACzB,IACE,CAAC,GAAG,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;gBACnB,CAAC,GAAG,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;gBACnB,CAAC,GAAG,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;gBACnB,CAAC,GAAG,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;gBACnB,CAAC,GAAG,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;gBACnB,CAAC,GAAG,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,EACnB;gBACA,OAAO,CAAC,CAAC,CAAC;aACX;YACD,MAAM,KAAK,GAAG,wBAAwB,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;YAC1D,IAAI,UAAU,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE;gBAEzB,OAAO,CAAC,CAAC,CAAC;aACX;YACD,MAAM,MAAM,GAAG,wBAAwB,CAAC,UAAU,CAAC,KAAK,CAAC,CAAC;YAC1D,MAAM,IAAI,GACR,MAAM,KAAK,mBAAmB,IAAI,MAAM,KAAK,YAAY,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;YACpE,IAAI,CAAC,IAAI,EAAE;gBACT,wBAAwB,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC;aAC1C;YAED,OAAO,IAAI,CAAC;QACd,CAAC,CAAC;QAEF,IAAI,YAAY,GAAG,CAAC,CAAC;QAErB,MAAM,OAAO,GAAG,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,EAAE;YAC1B,MAAM,KAAK,GAAG,wBAAwB,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;YAC1D,IAAI,UAAU,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE;gBACzB,OAAO;aACR;YAED,mBAAmB,CAAC,QAAQ,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,mBAAmB,CAAC,CAAC;YAC3D,UAAU,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;YACtB,YAAY,EAAE,CAAC;QACjB,CAAC,CAAC;
|
|
1
|
+
{"version":3,"file":"islandRemoval.js","sourceRoot":"","sources":["../../../../../../src/tools/segmentation/strategies/compositions/islandRemoval.ts"],"names":[],"mappings":";;;;;AACA,6FAAqE;AACrE,kHAAqH;AACrH,4FAAoE;AASpE,kBAAe;IACb,CAAC,2BAAiB,CAAC,gBAAgB,CAAC,EAAE,CACpC,aAAuC,EACvC,EAAE;QACF,MAAM,EACJ,mBAAmB,EAAE,mBAAmB,EACxC,wBAAwB,EAAE,wBAAwB,EAClD,6BAA6B,EAC7B,mBAAmB,EACnB,YAAY,GACb,GAAG,aAAa,CAAC;QAElB,IAAI,CAAC,6BAA6B,CAAC,SAAS,IAAI,YAAY,KAAK,IAAI,EAAE;YACrE,OAAO;SACR;QAED,MAAM,aAAa,GAAG,mBAAmB,CAAC,SAAS,EAAE,CAAC;QACtD,IAAI,CAAC,CAAA,aAAa,aAAb,aAAa,uBAAb,aAAa,CAAE,MAAM,CAAA,EAAE;YAC1B,OAAO;SACR;QAED,IAAI,mBAAmB,KAAK,SAAS,EAAE;YACrC,OAAO;SACR;QAID,MAAM,SAAS,GAAG,mBAAmB;aAClC,YAAY,EAAE;aACd,GAAG,CAAC,CAAC,KAAK,EAAE,CAAC,EAAE,EAAE,CAAC;YACjB,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,GAAG,aAAa,CAAC,GAAG,CAAC,CAAC,KAAK,EAAE,EAAE,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC;YAC7D,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,GAAG,aAAa,CAAC,GAAG,CAAC,CAAC,KAAK,EAAE,EAAE,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC;SAC9D,CAAC,CAAC;QAEL,IAAI,SAAS,CAAC,IAAI,CAAC,CAAC,EAAE,EAAE,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,GAAG,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC,EAAE;YAEtD,OAAO;SACR;QAED,MAAM,UAAU,GAAG,IAAI,GAAG,EAAU,CAAC;QAErC,MAAM,MAAM,GAAG,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,EAAE;YACzB,IACE,CAAC,GAAG,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;gBACnB,CAAC,GAAG,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;gBACnB,CAAC,GAAG,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;gBACnB,CAAC,GAAG,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;gBACnB,CAAC,GAAG,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;gBACnB,CAAC,GAAG,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,EACnB;gBACA,OAAO,CAAC,CAAC,CAAC;aACX;YACD,MAAM,KAAK,GAAG,wBAAwB,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;YAC1D,IAAI,UAAU,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE;gBAEzB,OAAO,CAAC,CAAC,CAAC;aACX;YACD,MAAM,MAAM,GAAG,wBAAwB,CAAC,UAAU,CAAC,KAAK,CAAC,CAAC;YAC1D,MAAM,IAAI,GACR,MAAM,KAAK,mBAAmB,IAAI,MAAM,KAAK,YAAY,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;YACpE,IAAI,CAAC,IAAI,EAAE;gBACT,wBAAwB,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC;aAC1C;YAED,OAAO,IAAI,CAAC;QACd,CAAC,CAAC;QAEF,IAAI,YAAY,GAAG,CAAC,CAAC;QAErB,MAAM,OAAO,GAAG,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,EAAE;YAC1B,MAAM,KAAK,GAAG,wBAAwB,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;YAC1D,IAAI,UAAU,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE;gBACzB,OAAO;aACR;YAED,mBAAmB,CAAC,QAAQ,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,mBAAmB,CAAC,CAAC;YAC3D,UAAU,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;YACtB,YAAY,EAAE,CAAC;QACjB,CAAC,CAAC;QACF,aAAa,CAAC,OAAO,CAAC,CAAC,YAAY,EAAE,EAAE;YAErC,IAAI,MAAM,CAAC,GAAG,YAAY,CAAC,KAAK,CAAC,EAAE;gBACjC,IAAA,mBAAS,EAAC,MAAM,EAAE,YAAY,EAAE;oBAC9B,OAAO;oBACP,SAAS,EAAE,IAAI;iBAChB,CAAC,CAAC;aACJ;QACH,CAAC,CAAC,CAAC;QAEH,IAAI,YAAY,GAAG,CAAC,CAAC;QACrB,IAAI,YAAY,GAAG,CAAC,CAAC;QAErB,MAAM,QAAQ,GAAG,CAAC,EAAE,KAAK,EAAE,QAAQ,EAAE,KAAK,EAAE,UAAU,EAAE,EAAE,EAAE;YAC1D,MAAM,KAAK,GAAG,wBAAwB,CAAC,UAAU,CAAC,KAAK,CAAC,CAAC;YACzD,IAAI,UAAU,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE;gBACzB,YAAY,EAAE,CAAC;gBACf,MAAM,QAAQ,GACZ,UAAU,KAAK,YAAY,CAAC,CAAC,CAAC,YAAY,CAAC,CAAC,CAAC,mBAAmB,CAAC;gBACnE,mBAAmB,CAAC,aAAa,CAAC,QAAQ,EAAE,QAAQ,CAAC,CAAC;aACvD;iBAAM,IAAI,KAAK,KAAK,mBAAmB,EAAE;gBACxC,YAAY,EAAE,CAAC;gBACf,MAAM,QAAQ,GAAG,UAAU,aAAV,UAAU,cAAV,UAAU,GAAI,CAAC,CAAC;gBACjC,mBAAmB,CAAC,aAAa,CAAC,QAAQ,EAAE,QAAQ,CAAC,CAAC;aACvD;QACH,CAAC,CAAC;QAEF,mBAAmB,CAAC,OAAO,CAAC,QAAQ,EAAE,EAAE,CAAC,CAAC;QAE1C,IAAI,YAAY,GAAG,YAAY,KAAK,CAAC,EAAE;YACrC,OAAO,CAAC,IAAI,CACV,qBAAqB,EACrB,YAAY,EACZ,UAAU,EACV,YAAY,EACZ,gBAAgB,EAChB,YAAY,EACZ,aAAa,EACb,YAAY,GAAG,YAAY,CAC5B,CAAC;SACH;QACD,MAAM,SAAS,GAAG,IAAI,GAAG,CAAC,wBAAwB,CAAC,MAAM,IAAI,EAAE,CAAC,CAAC;QACjE,UAAU,CAAC,KAAK,EAAE,CAAC;QAEnB,KAAK,MAAM,KAAK,IAAI,SAAS,CAAC,IAAI,EAAE,EAAE;YACpC,IAAI,UAAU,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE;gBACzB,SAAS;aACV;YACD,IAAI,UAAU,GAAG,IAAI,CAAC;YACtB,MAAM,WAAW,GAAG,IAAI,GAAG,EAAU,CAAC;YACtC,MAAM,eAAe,GAAG,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,EAAE,EAAE;gBAClC,MAAM,UAAU,GAAG,mBAAmB,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC;gBAC1D,UAAU,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;gBAC3B,IACE,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,KAAK,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;oBAClC,CAAC,CAAC,KAAK,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,KAAK,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;oBACnD,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,KAAK,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;wBAClC,CAAC,CAAC,KAAK,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,KAAK,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;oBACnD,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,KAAK,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;wBAClC,CAAC,CAAC,KAAK,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,KAAK,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,EACnD;oBACA,UAAU,GAAG,KAAK,CAAC;iBACpB;gBACD,IAAI,UAAU,EAAE;oBACd,WAAW,CAAC,GAAG,CAAC,UAAU,CAAC,CAAC;iBAC7B;YACH,CAAC,CAAC;YACF,MAAM,QAAQ,GAAG,mBAAmB,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC;YAClD,IAAI,MAAM,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,EAAE;gBAC7B,SAAS;aACV;YACD,IAAA,mBAAS,EAAC,MAAM,EAAE,QAAQ,EAAE;gBAC1B,OAAO,EAAE,eAAe;gBACxB,SAAS,EAAE,KAAK;aACjB,CAAC,CAAC;YACH,IAAI,UAAU,EAAE;gBACd,KAAK,MAAM,KAAK,IAAI,WAAW,EAAE;oBAC/B,mBAAmB,CAAC,UAAU,CAAC,KAAK,EAAE,mBAAmB,CAAC,CAAC;iBAC5D;aACF;SACF;QACD,IAAA,2DAA+B,EAC7B,aAAa,CAAC,cAAc,EAC5B,mBAAmB,CAAC,gBAAgB,EAAE,CACvC,CAAC;IACJ,CAAC;CACF,CAAC"}
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@@ -3,21 +3,25 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
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return (mod && mod.__esModule) ? mod : { "default": mod };
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};
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Object.defineProperty(exports, "__esModule", { value: true });
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+
const gl_matrix_1 = require("gl-matrix");
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const StrategyCallbacks_1 = __importDefault(require("../../../../enums/StrategyCallbacks"));
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|
exports.default = {
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[StrategyCallbacks_1.default.CreateIsInThreshold]: (operationData) => {
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9
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-
const { imageVoxelManager
|
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10
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+
const { imageVoxelManager, strategySpecificConfiguration, segmentIndex } = operationData;
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if (!strategySpecificConfiguration || !segmentIndex) {
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return;
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}
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return (index) => {
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const { THRESHOLD, THRESHOLD_INSIDE_CIRCLE } = strategySpecificConfiguration;
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const voxelValue = imageVoxelManager.getAtIndex(index);
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+
const gray = Array.isArray(voxelValue)
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? gl_matrix_1.vec3.length(voxelValue)
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: voxelValue;
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const { threshold } = THRESHOLD || THRESHOLD_INSIDE_CIRCLE || {};
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if (!(threshold === null || threshold === void 0 ? void 0 : threshold.length)) {
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return true;
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}
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-
return threshold[0] <=
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+
return threshold[0] <= gray && gray <= threshold[1];
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|
};
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},
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};
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"threshold.js","sourceRoot":"","sources":["../../../../../../src/tools/segmentation/strategies/compositions/threshold.ts"],"names":[],"mappings":";;;;;
|
|
1
|
+
{"version":3,"file":"threshold.js","sourceRoot":"","sources":["../../../../../../src/tools/segmentation/strategies/compositions/threshold.ts"],"names":[],"mappings":";;;;;AAAA,yCAAiC;AAGjC,4FAAoE;AAOpE,kBAAe;IACb,CAAC,2BAAiB,CAAC,mBAAmB,CAAC,EAAE,CACvC,aAAuC,EACvC,EAAE;QACF,MAAM,EAAE,iBAAiB,EAAE,6BAA6B,EAAE,YAAY,EAAE,GACtE,aAAa,CAAC;QAChB,IAAI,CAAC,6BAA6B,IAAI,CAAC,YAAY,EAAE;YACnD,OAAO;SACR;QACD,OAAO,CAAC,KAAK,EAAE,EAAE;YACf,MAAM,EAAE,SAAS,EAAE,uBAAuB,EAAE,GAC1C,6BAA6B,CAAC;YAEhC,MAAM,UAAU,GAAG,iBAAiB,CAAC,UAAU,CAAC,KAAK,CAAC,CAAC;YACvD,MAAM,IAAI,GAAG,KAAK,CAAC,OAAO,CAAC,UAAU,CAAC;gBACpC,CAAC,CAAC,gBAAI,CAAC,MAAM,CAAC,UAA0B,CAAC;gBACzC,CAAC,CAAC,UAAU,CAAC;YAGf,MAAM,EAAE,SAAS,EAAE,GAAG,SAAS,IAAI,uBAAuB,IAAI,EAAE,CAAC;YACjE,IAAI,CAAC,CAAA,SAAS,aAAT,SAAS,uBAAT,SAAS,CAAE,MAAM,CAAA,EAAE;gBACtB,OAAO,IAAI,CAAC;aACb;YACD,OAAO,SAAS,CAAC,CAAC,CAAC,IAAI,IAAI,IAAI,IAAI,IAAI,SAAS,CAAC,CAAC,CAAC,CAAC;QACtD,CAAC,CAAC;IACJ,CAAC;CACF,CAAC"}
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@@ -1,12 +1,11 @@
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1
|
-
import { utilities } from '@cornerstonejs/core';
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2
1
|
declare function getStrategyData({ operationData, viewport }: {
|
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3
2
|
operationData: any;
|
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4
3
|
viewport: any;
|
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5
4
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}): {
|
|
6
5
|
segmentationImageData: any;
|
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7
6
|
segmentationScalarData: any;
|
|
8
|
-
segmentationVoxelManager:
|
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7
|
+
segmentationVoxelManager: any;
|
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9
8
|
imageScalarData: any;
|
|
10
|
-
imageVoxelManager:
|
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9
|
+
imageVoxelManager: any;
|
|
11
10
|
};
|
|
12
11
|
export { getStrategyData };
|
|
@@ -5,15 +5,19 @@ const core_1 = require("@cornerstonejs/core");
|
|
|
5
5
|
const stackVolumeCheck_1 = require("./stackVolumeCheck");
|
|
6
6
|
const { VoxelManager } = core_1.utilities;
|
|
7
7
|
function getStrategyData({ operationData, viewport }) {
|
|
8
|
+
var _a;
|
|
8
9
|
let segmentationImageData, segmentationScalarData, imageScalarData;
|
|
9
10
|
let imageDimensions;
|
|
10
11
|
let segmentationDimensions;
|
|
12
|
+
let imageVoxelManager;
|
|
13
|
+
let segmentationVoxelManager;
|
|
11
14
|
if ((0, stackVolumeCheck_1.isVolumeSegmentation)(operationData, viewport)) {
|
|
12
15
|
const { volumeId, referencedVolumeId } = operationData;
|
|
13
16
|
const segmentationVolume = core_1.cache.getVolume(volumeId);
|
|
14
17
|
if (!segmentationVolume) {
|
|
15
18
|
return;
|
|
16
19
|
}
|
|
20
|
+
segmentationVoxelManager = segmentationVolume.voxelManager;
|
|
17
21
|
if (referencedVolumeId) {
|
|
18
22
|
const imageVolume = core_1.cache.getVolume(referencedVolumeId);
|
|
19
23
|
imageScalarData = imageVolume.getScalarData();
|
|
@@ -33,22 +37,33 @@ function getStrategyData({ operationData, viewport }) {
|
|
|
33
37
|
return;
|
|
34
38
|
}
|
|
35
39
|
const actor = viewport.getActor(segmentationRepresentationUID);
|
|
40
|
+
if (!actor) {
|
|
41
|
+
return;
|
|
42
|
+
}
|
|
36
43
|
segmentationImageData = actor.actor.getMapper().getInputData();
|
|
44
|
+
segmentationVoxelManager = segmentationImageData.voxelManager;
|
|
37
45
|
const currentSegmentationImageId = imageIdReferenceMap.get(currentImageId);
|
|
38
46
|
const segmentationImage = core_1.cache.getImage(currentSegmentationImageId);
|
|
39
|
-
|
|
47
|
+
if (!segmentationImage) {
|
|
48
|
+
return;
|
|
49
|
+
}
|
|
50
|
+
segmentationScalarData = (_a = segmentationImage.getPixelData) === null || _a === void 0 ? void 0 : _a.call(segmentationImage);
|
|
40
51
|
const image = core_1.cache.getImage(currentImageId);
|
|
41
|
-
|
|
42
|
-
|
|
52
|
+
const imageData = image ? null : viewport.getImageData();
|
|
53
|
+
imageScalarData = (image === null || image === void 0 ? void 0 : image.getPixelData()) || imageData.getScalarData();
|
|
54
|
+
imageDimensions = image
|
|
55
|
+
? [image.columns, image.rows, 1]
|
|
56
|
+
: imageData.dimensions;
|
|
43
57
|
segmentationDimensions = [
|
|
44
58
|
segmentationImage.columns,
|
|
45
59
|
segmentationImage.rows,
|
|
46
60
|
1,
|
|
47
61
|
];
|
|
62
|
+
imageVoxelManager = image === null || image === void 0 ? void 0 : image.voxelManager;
|
|
48
63
|
}
|
|
49
|
-
|
|
50
|
-
|
|
51
|
-
VoxelManager.createVolumeVoxelManager(imageDimensions, imageScalarData);
|
|
64
|
+
segmentationVoxelManager || (segmentationVoxelManager = VoxelManager.createVolumeVoxelManager(segmentationDimensions, segmentationScalarData));
|
|
65
|
+
imageVoxelManager || (imageVoxelManager = imageDimensions &&
|
|
66
|
+
VoxelManager.createVolumeVoxelManager(imageDimensions, imageScalarData));
|
|
52
67
|
return {
|
|
53
68
|
segmentationImageData,
|
|
54
69
|
segmentationScalarData,
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"getStrategyData.js","sourceRoot":"","sources":["../../../../../../src/tools/segmentation/strategies/utils/getStrategyData.ts"],"names":[],"mappings":";;;AAAA,8CAAuD;AAEvD,yDAA0D;AAG1D,MAAM,EAAE,YAAY,EAAE,GAAG,gBAAS,CAAC;AAEnC,SAAS,eAAe,CAAC,EAAE,aAAa,EAAE,QAAQ,EAAE
|
|
1
|
+
{"version":3,"file":"getStrategyData.js","sourceRoot":"","sources":["../../../../../../src/tools/segmentation/strategies/utils/getStrategyData.ts"],"names":[],"mappings":";;;AAAA,8CAAuD;AAEvD,yDAA0D;AAG1D,MAAM,EAAE,YAAY,EAAE,GAAG,gBAAS,CAAC;AAEnC,SAAS,eAAe,CAAC,EAAE,aAAa,EAAE,QAAQ,EAAE;;IAClD,IAAI,qBAAqB,EAAE,sBAAsB,EAAE,eAAe,CAAC;IACnE,IAAI,eAA6B,CAAC;IAClC,IAAI,sBAAoC,CAAC;IACzC,IAAI,iBAAiB,CAAC;IACtB,IAAI,wBAAwB,CAAC;IAE7B,IAAI,IAAA,uCAAoB,EAAC,aAAa,EAAE,QAAQ,CAAC,EAAE;QACjD,MAAM,EAAE,QAAQ,EAAE,kBAAkB,EAAE,GAAG,aAAa,CAAC;QAEvD,MAAM,kBAAkB,GAAG,YAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,CAAC;QAErD,IAAI,CAAC,kBAAkB,EAAE;YACvB,OAAO;SACR;QACD,wBAAwB,GAAG,kBAAkB,CAAC,YAAY,CAAC;QAI3D,IAAI,kBAAkB,EAAE;YACtB,MAAM,WAAW,GAAG,YAAK,CAAC,SAAS,CAAC,kBAAkB,CAAC,CAAC;YACxD,eAAe,GAAG,WAAW,CAAC,aAAa,EAAE,CAAC;YAC9C,eAAe,GAAG,WAAW,CAAC,UAAU,CAAC;SAC1C;QAED,CAAC,EAAE,SAAS,EAAE,qBAAqB,EAAE,GAAG,kBAAkB,CAAC,CAAC;QAC5D,sBAAsB,GAAG,kBAAkB,CAAC,aAAa,EAAE,CAAC;QAC5D,sBAAsB,GAAG,kBAAkB,CAAC,UAAU,CAAC;KACxD;SAAM;QACL,MAAM,EAAE,mBAAmB,EAAE,6BAA6B,EAAE,GAC1D,aAA+C,CAAC;QAElD,IAAI,CAAC,mBAAmB,EAAE;YACxB,OAAO;SACR;QAED,MAAM,cAAc,GAAG,QAAQ,CAAC,iBAAiB,EAAE,CAAC;QACpD,IAAI,CAAC,cAAc,EAAE;YACnB,OAAO;SACR;QAKD,MAAM,KAAK,GAAG,QAAQ,CAAC,QAAQ,CAAC,6BAA6B,CAAC,CAAC;QAC/D,IAAI,CAAC,KAAK,EAAE;YACV,OAAO;SACR;QACD,qBAAqB,GAAG,KAAK,CAAC,KAAK,CAAC,SAAS,EAAE,CAAC,YAAY,EAAE,CAAC;QAC/D,wBAAwB,GAAG,qBAAqB,CAAC,YAAY,CAAC;QAC9D,MAAM,0BAA0B,GAAG,mBAAmB,CAAC,GAAG,CAAC,cAAc,CAAC,CAAC;QAE3E,MAAM,iBAAiB,GAAG,YAAK,CAAC,QAAQ,CAAC,0BAA0B,CAAC,CAAC;QACrE,IAAI,CAAC,iBAAiB,EAAE;YACtB,OAAO;SACR;QACD,sBAAsB,GAAG,MAAA,iBAAiB,CAAC,YAAY,iEAAI,CAAC;QAE5D,MAAM,KAAK,GAAG,YAAK,CAAC,QAAQ,CAAC,cAAc,CAAC,CAAC;QAC7C,MAAM,SAAS,GAAG,KAAK,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,QAAQ,CAAC,YAAY,EAAE,CAAC;QAKzD,eAAe,GAAG,CAAA,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,YAAY,EAAE,KAAI,SAAS,CAAC,aAAa,EAAE,CAAC;QACrE,eAAe,GAAG,KAAK;YACrB,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,EAAE,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC;YAChC,CAAC,CAAC,SAAS,CAAC,UAAU,CAAC;QACzB,sBAAsB,GAAG;YACvB,iBAAiB,CAAC,OAAO;YACzB,iBAAiB,CAAC,IAAI;YACtB,CAAC;SACF,CAAC;QACF,iBAAiB,GAAG,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,YAAY,CAAC;KACzC;IAED,wBAAwB,KAAxB,wBAAwB,GAAK,YAAY,CAAC,wBAAwB,CAChE,sBAAsB,EACtB,sBAAsB,CACvB,EAAC;IAEF,iBAAiB,KAAjB,iBAAiB,GACf,eAAe;QACf,YAAY,CAAC,wBAAwB,CAAC,eAAe,EAAE,eAAe,CAAC,EAAC;IAE1E,OAAO;QACL,qBAAqB;QACrB,sBAAsB;QACtB,wBAAwB;QACxB,eAAe;QACf,iBAAiB;KAClB,CAAC;AACJ,CAAC;AAEQ,0CAAe"}
|
|
@@ -4,6 +4,7 @@ const gl_matrix_1 = require("gl-matrix");
|
|
|
4
4
|
function pointInShapeCallback(imageData, pointInShapeFn, callback, boundsIJK) {
|
|
5
5
|
let iMin, iMax, jMin, jMax, kMin, kMax;
|
|
6
6
|
let scalarData;
|
|
7
|
+
const { numComps } = imageData;
|
|
7
8
|
if (imageData.getScalarData) {
|
|
8
9
|
scalarData = imageData.getScalarData();
|
|
9
10
|
}
|
|
@@ -36,7 +37,8 @@ function pointInShapeCallback(imageData, pointInShapeFn, callback, boundsIJK) {
|
|
|
36
37
|
const rowStep = gl_matrix_1.vec3.fromValues(rowCosines[0] * rowSpacing, rowCosines[1] * rowSpacing, rowCosines[2] * rowSpacing);
|
|
37
38
|
const columnStep = gl_matrix_1.vec3.fromValues(columnCosines[0] * columnSpacing, columnCosines[1] * columnSpacing, columnCosines[2] * columnSpacing);
|
|
38
39
|
const scanAxisStep = gl_matrix_1.vec3.fromValues(scanAxisNormal[0] * scanAxisSpacing, scanAxisNormal[1] * scanAxisSpacing, scanAxisNormal[2] * scanAxisSpacing);
|
|
39
|
-
const xMultiple =
|
|
40
|
+
const xMultiple = numComps ||
|
|
41
|
+
scalarData.length / dimensions[2] / dimensions[1] / dimensions[0];
|
|
40
42
|
const yMultiple = dimensions[0] * xMultiple;
|
|
41
43
|
const zMultiple = dimensions[1] * yMultiple;
|
|
42
44
|
const pointsInShape = [];
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"pointInShapeCallback.js","sourceRoot":"","sources":["../../../src/utilities/pointInShapeCallback.ts"],"names":[],"mappings":";;AAAA,yCAAiC;AAwCjC,SAAwB,oBAAoB,CAC1C,SAA4C,EAC5C,cAA+B,EAC/B,QAA+B,EAC/B,SAAqB;IAErB,IAAI,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,CAAC;IAEvC,IAAI,UAAU,CAAC;
|
|
1
|
+
{"version":3,"file":"pointInShapeCallback.js","sourceRoot":"","sources":["../../../src/utilities/pointInShapeCallback.ts"],"names":[],"mappings":";;AAAA,yCAAiC;AAwCjC,SAAwB,oBAAoB,CAC1C,SAA4C,EAC5C,cAA+B,EAC/B,QAA+B,EAC/B,SAAqB;IAErB,IAAI,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,CAAC;IAEvC,IAAI,UAAU,CAAC;IACf,MAAM,EAAE,QAAQ,EAAE,GAAG,SAAgB,CAAC;IAGtC,IAAK,SAAgC,CAAC,aAAa,EAAE;QACnD,UAAU,GAAI,SAAgC,CAAC,aAAa,EAAE,CAAC;KAChE;SAAM;QACL,UAAU,GAAI,SAA0B;aACrC,YAAY,EAAE;aACd,UAAU,EAAE;aACZ,OAAO,EAAE,CAAC;KACd;IAED,MAAM,UAAU,GAAG,SAAS,CAAC,aAAa,EAAE,CAAC;IAE7C,IAAI,CAAC,SAAS,EAAE;QACd,IAAI,GAAG,CAAC,CAAC;QACT,IAAI,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;QACrB,IAAI,GAAG,CAAC,CAAC;QACT,IAAI,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;QACrB,IAAI,GAAG,CAAC,CAAC;QACT,IAAI,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;KACtB;SAAM;QACL,CAAC,CAAC,IAAI,EAAE,IAAI,CAAC,EAAE,CAAC,IAAI,EAAE,IAAI,CAAC,EAAE,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC,GAAG,SAAS,CAAC;KACxD;IAED,MAAM,KAAK,GAAG,gBAAI,CAAC,UAAU,CAAC,IAAI,EAAE,IAAI,EAAE,IAAI,CAAC,CAAC;IAEhD,MAAM,SAAS,GAAG,SAAS,CAAC,YAAY,EAAE,CAAC;IAC3C,MAAM,UAAU,GAAG,SAAS,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;IACzC,MAAM,aAAa,GAAG,SAAS,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;IAC5C,MAAM,cAAc,GAAG,SAAS,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;IAE7C,MAAM,OAAO,GAAG,SAAS,CAAC,UAAU,EAAE,CAAC;IACvC,MAAM,CAAC,UAAU,EAAE,aAAa,EAAE,eAAe,CAAC,GAAG,OAAO,CAAC;IAG7D,MAAM,aAAa,GAAG,SAAS,CAAC,YAAY,CAAC,KAAK,CAAC,CAAC;IAEpD,MAAM,OAAO,GAAG,gBAAI,CAAC,UAAU,CAC7B,UAAU,CAAC,CAAC,CAAC,GAAG,UAAU,EAC1B,UAAU,CAAC,CAAC,CAAC,GAAG,UAAU,EAC1B,UAAU,CAAC,CAAC,CAAC,GAAG,UAAU,CAC3B,CAAC;IAEF,MAAM,UAAU,GAAG,gBAAI,CAAC,UAAU,CAChC,aAAa,CAAC,CAAC,CAAC,GAAG,aAAa,EAChC,aAAa,CAAC,CAAC,CAAC,GAAG,aAAa,EAChC,aAAa,CAAC,CAAC,CAAC,GAAG,aAAa,CACjC,CAAC;IAEF,MAAM,YAAY,GAAG,gBAAI,CAAC,UAAU,CAClC,cAAc,CAAC,CAAC,CAAC,GAAG,eAAe,EACnC,cAAc,CAAC,CAAC,CAAC,GAAG,eAAe,EACnC,cAAc,CAAC,CAAC,CAAC,GAAG,eAAe,CACpC,CAAC;IAEF,MAAM,SAAS,GACb,QAAQ;QACR,UAAU,CAAC,MAAM,GAAG,UAAU,CAAC,CAAC,CAAC,GAAG,UAAU,CAAC,CAAC,CAAC,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC;IACpE,MAAM,SAAS,GAAG,UAAU,CAAC,CAAC,CAAC,GAAG,SAAS,CAAC;IAC5C,MAAM,SAAS,GAAG,UAAU,CAAC,CAAC,CAAC,GAAG,SAAS,CAAC;IAE5C,MAAM,aAAa,GAAwB,EAAE,CAAC;IAE9C,MAAM,UAAU,GAAG,gBAAI,CAAC,KAAK,CAAC,aAAa,CAAC,CAAC;IAE7C,KAAK,IAAI,CAAC,GAAG,IAAI,EAAE,CAAC,IAAI,IAAI,EAAE,CAAC,EAAE,EAAE;QACjC,MAAM,SAAS,GAAG,gBAAI,CAAC,KAAK,CAAC,UAAU,CAAC,CAAC;QAEzC,KAAK,IAAI,CAAC,GAAG,IAAI,EAAE,CAAC,IAAI,IAAI,EAAE,CAAC,EAAE,EAAE;YACjC,MAAM,SAAS,GAAG,gBAAI,CAAC,KAAK,CAAC,UAAU,CAAC,CAAC;YAEzC,KAAK,IAAI,CAAC,GAAG,IAAI,EAAE,CAAC,IAAI,IAAI,EAAE,CAAC,EAAE,EAAE;gBACjC,MAAM,QAAQ,GAAiB,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;gBAGzC,IAAI,cAAc,CAAC,UAA0B,EAAE,QAAQ,CAAC,EAAE;oBACxD,MAAM,KAAK,GAAG,CAAC,GAAG,SAAS,GAAG,CAAC,GAAG,SAAS,GAAG,CAAC,GAAG,SAAS,CAAC;oBAC5D,IAAI,KAAK,CAAC;oBACV,IAAI,SAAS,GAAG,CAAC,EAAE;wBACjB,KAAK,GAAG;4BACN,UAAU,CAAC,KAAK,CAAC;4BACjB,UAAU,CAAC,KAAK,GAAG,CAAC,CAAC;4BACrB,UAAU,CAAC,KAAK,GAAG,CAAC,CAAC;yBACtB,CAAC;qBACH;yBAAM;wBACL,KAAK,GAAG,UAAU,CAAC,KAAK,CAAC,CAAC;qBAC3B;oBAED,aAAa,CAAC,IAAI,CAAC,EAAE,KAAK,EAAE,KAAK,EAAE,QAAQ,EAAE,QAAQ,EAAE,UAAU,EAAE,CAAC,CAAC;oBACrE,IAAI,QAAQ,EAAE;wBACZ,QAAQ,CAAC,EAAE,KAAK,EAAE,KAAK,EAAE,QAAQ,EAAE,QAAQ,EAAE,UAAU,EAAE,CAAC,CAAC;qBAC5D;iBACF;gBAGD,gBAAI,CAAC,GAAG,CAAC,UAAU,EAAE,UAAU,EAAE,OAAO,CAAC,CAAC;aAC3C;YAGD,gBAAI,CAAC,IAAI,CAAC,UAAU,EAAE,SAAS,CAAC,CAAC;YACjC,gBAAI,CAAC,GAAG,CAAC,UAAU,EAAE,UAAU,EAAE,UAAU,CAAC,CAAC;SAC9C;QAGD,gBAAI,CAAC,IAAI,CAAC,UAAU,EAAE,SAAS,CAAC,CAAC;QACjC,gBAAI,CAAC,GAAG,CAAC,UAAU,EAAE,UAAU,EAAE,YAAY,CAAC,CAAC;KAChD;IAED,OAAO,aAAa,CAAC;AACvB,CAAC;AAvHD,uCAuHC"}
|