@cornerstonejs/tools 1.53.0 → 1.54.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (713) hide show
  1. package/dist/cjs/enums/WorkerTypes.d.ts +8 -0
  2. package/dist/cjs/enums/WorkerTypes.js +12 -0
  3. package/dist/cjs/enums/WorkerTypes.js.map +1 -0
  4. package/dist/cjs/enums/index.d.ts +2 -1
  5. package/dist/cjs/enums/index.js +3 -1
  6. package/dist/cjs/enums/index.js.map +1 -1
  7. package/dist/cjs/eventListeners/annotations/contourSegmentation/contourSegmentationCompleted.js +6 -11
  8. package/dist/cjs/eventListeners/annotations/contourSegmentation/contourSegmentationCompleted.js.map +1 -1
  9. package/dist/cjs/eventListeners/segmentation/imageChangeEventListener.js +4 -3
  10. package/dist/cjs/eventListeners/segmentation/imageChangeEventListener.js.map +1 -1
  11. package/dist/cjs/eventListeners/segmentation/labelmap/onLabelmapSegmentationDataModified.js +58 -47
  12. package/dist/cjs/eventListeners/segmentation/labelmap/onLabelmapSegmentationDataModified.js.map +1 -1
  13. package/dist/cjs/stateManagement/annotation/FrameOfReferenceSpecificAnnotationManager.d.ts +1 -0
  14. package/dist/cjs/stateManagement/annotation/FrameOfReferenceSpecificAnnotationManager.js +5 -0
  15. package/dist/cjs/stateManagement/annotation/FrameOfReferenceSpecificAnnotationManager.js.map +1 -1
  16. package/dist/cjs/stateManagement/annotation/annotationState.d.ts +2 -1
  17. package/dist/cjs/stateManagement/annotation/annotationState.js +6 -1
  18. package/dist/cjs/stateManagement/annotation/annotationState.js.map +1 -1
  19. package/dist/cjs/stateManagement/segmentation/SegmentationStateManager.js +4 -1
  20. package/dist/cjs/stateManagement/segmentation/SegmentationStateManager.js.map +1 -1
  21. package/dist/cjs/stateManagement/segmentation/addRepresentationData.d.ts +12 -0
  22. package/dist/cjs/stateManagement/segmentation/addRepresentationData.js +35 -0
  23. package/dist/cjs/stateManagement/segmentation/addRepresentationData.js.map +1 -0
  24. package/dist/cjs/stateManagement/segmentation/addSegmentationRepresentation.js +32 -14
  25. package/dist/cjs/stateManagement/segmentation/addSegmentationRepresentation.js.map +1 -1
  26. package/dist/cjs/stateManagement/segmentation/config/segmentationVisibility.js +3 -52
  27. package/dist/cjs/stateManagement/segmentation/config/segmentationVisibility.js.map +1 -1
  28. package/dist/cjs/stateManagement/segmentation/convertStackToVolumeSegmentation.d.ts +9 -2
  29. package/dist/cjs/stateManagement/segmentation/convertStackToVolumeSegmentation.js +44 -27
  30. package/dist/cjs/stateManagement/segmentation/convertStackToVolumeSegmentation.js.map +1 -1
  31. package/dist/cjs/stateManagement/segmentation/convertVolumeToStackSegmentation.d.ts +13 -0
  32. package/dist/cjs/stateManagement/segmentation/convertVolumeToStackSegmentation.js +52 -26
  33. package/dist/cjs/stateManagement/segmentation/convertVolumeToStackSegmentation.js.map +1 -1
  34. package/dist/cjs/stateManagement/segmentation/helpers/validateSegmentationInput.js +6 -9
  35. package/dist/cjs/stateManagement/segmentation/helpers/validateSegmentationInput.js.map +1 -1
  36. package/dist/cjs/stateManagement/segmentation/index.d.ts +3 -1
  37. package/dist/cjs/stateManagement/segmentation/index.js +5 -1
  38. package/dist/cjs/stateManagement/segmentation/index.js.map +1 -1
  39. package/dist/cjs/stateManagement/segmentation/polySeg/Contour/computeAndAddContourRepresentation.d.ts +2 -0
  40. package/dist/cjs/stateManagement/segmentation/polySeg/Contour/computeAndAddContourRepresentation.js +8 -0
  41. package/dist/cjs/stateManagement/segmentation/polySeg/Contour/computeAndAddContourRepresentation.js.map +1 -0
  42. package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/computeAndAddLabelmapRepresentation.d.ts +2 -0
  43. package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/computeAndAddLabelmapRepresentation.js +11 -0
  44. package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/computeAndAddLabelmapRepresentation.js.map +1 -0
  45. package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/convertContourToLabelmap.d.ts +7 -0
  46. package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/convertContourToLabelmap.js +162 -0
  47. package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/convertContourToLabelmap.js.map +1 -0
  48. package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.d.ts +6 -0
  49. package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.js +71 -0
  50. package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.js.map +1 -0
  51. package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/labelmapComputationStrategies.d.ts +6 -0
  52. package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/labelmapComputationStrategies.js +120 -0
  53. package/dist/cjs/stateManagement/segmentation/polySeg/Labelmap/labelmapComputationStrategies.js.map +1 -0
  54. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/computeAndAddSurfaceRepresentation.d.ts +4 -0
  55. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/computeAndAddSurfaceRepresentation.js +12 -0
  56. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/computeAndAddSurfaceRepresentation.js.map +1 -0
  57. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/convertContourToSurface.d.ts +3 -0
  58. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/convertContourToSurface.js +52 -0
  59. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/convertContourToSurface.js.map +1 -0
  60. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/convertLabelmapToSurface.d.ts +3 -0
  61. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/convertLabelmapToSurface.js +60 -0
  62. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/convertLabelmapToSurface.js.map +1 -0
  63. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/createAndCacheSurfacesFromRaw.d.ts +5 -0
  64. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/createAndCacheSurfacesFromRaw.js +56 -0
  65. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/createAndCacheSurfacesFromRaw.js.map +1 -0
  66. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/surfaceComputationStrategies.d.ts +12 -0
  67. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/surfaceComputationStrategies.js +94 -0
  68. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/surfaceComputationStrategies.js.map +1 -0
  69. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/updateSurfaceData.d.ts +1 -0
  70. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/updateSurfaceData.js +74 -0
  71. package/dist/cjs/stateManagement/segmentation/polySeg/Surface/updateSurfaceData.js.map +1 -0
  72. package/dist/cjs/stateManagement/segmentation/polySeg/canComputeRequestedRepresentation.d.ts +2 -0
  73. package/dist/cjs/stateManagement/segmentation/polySeg/canComputeRequestedRepresentation.js +83 -0
  74. package/dist/cjs/stateManagement/segmentation/polySeg/canComputeRequestedRepresentation.js.map +1 -0
  75. package/dist/cjs/stateManagement/segmentation/polySeg/computeAndAddRepresentation.d.ts +3 -0
  76. package/dist/cjs/stateManagement/segmentation/polySeg/computeAndAddRepresentation.js +64 -0
  77. package/dist/cjs/stateManagement/segmentation/polySeg/computeAndAddRepresentation.js.map +1 -0
  78. package/dist/cjs/stateManagement/segmentation/polySeg/index.d.ts +5 -0
  79. package/dist/cjs/stateManagement/segmentation/polySeg/index.js +12 -0
  80. package/dist/cjs/stateManagement/segmentation/polySeg/index.js.map +1 -0
  81. package/dist/cjs/stateManagement/segmentation/polySeg/registerPolySegWorker.d.ts +1 -0
  82. package/dist/cjs/stateManagement/segmentation/polySeg/registerPolySegWorker.js +27 -0
  83. package/dist/cjs/stateManagement/segmentation/polySeg/registerPolySegWorker.js.map +1 -0
  84. package/dist/cjs/stateManagement/segmentation/segmentIndex.js +4 -0
  85. package/dist/cjs/stateManagement/segmentation/segmentIndex.js.map +1 -1
  86. package/dist/cjs/stateManagement/segmentation/segmentationState.d.ts +6 -1
  87. package/dist/cjs/stateManagement/segmentation/segmentationState.js +30 -1
  88. package/dist/cjs/stateManagement/segmentation/segmentationState.js.map +1 -1
  89. package/dist/cjs/tools/ScaleOverlayTool.js +2 -1
  90. package/dist/cjs/tools/ScaleOverlayTool.js.map +1 -1
  91. package/dist/cjs/tools/annotation/PlanarFreehandContourSegmentationTool.d.ts +1 -2
  92. package/dist/cjs/tools/annotation/PlanarFreehandContourSegmentationTool.js +0 -11
  93. package/dist/cjs/tools/annotation/PlanarFreehandContourSegmentationTool.js.map +1 -1
  94. package/dist/cjs/tools/annotation/PlanarFreehandROITool.js +1 -2
  95. package/dist/cjs/tools/annotation/PlanarFreehandROITool.js.map +1 -1
  96. package/dist/cjs/tools/annotation/ProbeTool.js +3 -0
  97. package/dist/cjs/tools/annotation/ProbeTool.js.map +1 -1
  98. package/dist/cjs/tools/annotation/planarFreehandROITool/drawLoop.js +1 -1
  99. package/dist/cjs/tools/annotation/planarFreehandROITool/drawLoop.js.map +1 -1
  100. package/dist/cjs/tools/annotation/planarFreehandROITool/openContourEndEditLoop.js +1 -1
  101. package/dist/cjs/tools/annotation/planarFreehandROITool/openContourEndEditLoop.js.map +1 -1
  102. package/dist/cjs/tools/base/AnnotationTool.js +1 -1
  103. package/dist/cjs/tools/base/AnnotationTool.js.map +1 -1
  104. package/dist/cjs/tools/base/BaseTool.js.map +1 -1
  105. package/dist/cjs/tools/base/ContourSegmentationBaseTool.d.ts +1 -2
  106. package/dist/cjs/tools/base/ContourSegmentationBaseTool.js +24 -24
  107. package/dist/cjs/tools/base/ContourSegmentationBaseTool.js.map +1 -1
  108. package/dist/cjs/tools/displayTools/Contour/contourDisplay.js +9 -6
  109. package/dist/cjs/tools/displayTools/Contour/contourDisplay.js.map +1 -1
  110. package/dist/cjs/tools/displayTools/Contour/removeContourFromElement.js.map +1 -1
  111. package/dist/cjs/tools/displayTools/Contour/{addContourSetsToElement.d.ts → vtkContour/addContourSetsToElement.d.ts} +1 -1
  112. package/dist/cjs/tools/displayTools/Contour/vtkContour/addContourSetsToElement.js.map +1 -0
  113. package/dist/cjs/tools/displayTools/Contour/vtkContour/addOrUpdateVTKContourSets.d.ts +3 -0
  114. package/dist/cjs/tools/displayTools/Contour/vtkContour/addOrUpdateVTKContourSets.js +14 -0
  115. package/dist/cjs/tools/displayTools/Contour/vtkContour/addOrUpdateVTKContourSets.js.map +1 -0
  116. package/dist/cjs/tools/displayTools/Contour/vtkContour/contourConfigCache.js.map +1 -0
  117. package/dist/cjs/tools/displayTools/Contour/vtkContour/updateVTKContourSets.d.ts +3 -0
  118. package/dist/cjs/tools/displayTools/Contour/{updateContourSets.js → vtkContour/updateVTKContourSets.js} +4 -4
  119. package/dist/cjs/tools/displayTools/Contour/vtkContour/updateVTKContourSets.js.map +1 -0
  120. package/dist/cjs/tools/displayTools/Contour/{utils.d.ts → vtkContour/utils.d.ts} +2 -2
  121. package/dist/cjs/tools/displayTools/Contour/vtkContour/utils.js.map +1 -0
  122. package/dist/cjs/tools/displayTools/Labelmap/addLabelmapToElement.js +1 -1
  123. package/dist/cjs/tools/displayTools/Labelmap/addLabelmapToElement.js.map +1 -1
  124. package/dist/cjs/tools/displayTools/Labelmap/index.d.ts +2 -1
  125. package/dist/cjs/tools/displayTools/Labelmap/index.js +4 -1
  126. package/dist/cjs/tools/displayTools/Labelmap/index.js.map +1 -1
  127. package/dist/cjs/tools/displayTools/Labelmap/labelmapDisplay.js +20 -2
  128. package/dist/cjs/tools/displayTools/Labelmap/labelmapDisplay.js.map +1 -1
  129. package/dist/cjs/tools/displayTools/Labelmap/validateLabelmap.d.ts +4 -0
  130. package/dist/cjs/tools/displayTools/Labelmap/validateLabelmap.js +38 -0
  131. package/dist/cjs/tools/displayTools/Labelmap/validateLabelmap.js.map +1 -0
  132. package/dist/cjs/tools/displayTools/Surface/addOrUpdateSurfaceToElement.d.ts +3 -0
  133. package/dist/cjs/tools/displayTools/Surface/addOrUpdateSurfaceToElement.js +112 -0
  134. package/dist/cjs/tools/displayTools/Surface/addOrUpdateSurfaceToElement.js.map +1 -0
  135. package/dist/cjs/tools/displayTools/Surface/surfaceConfig.d.ts +3 -0
  136. package/dist/cjs/tools/displayTools/Surface/surfaceConfig.js +11 -0
  137. package/dist/cjs/tools/displayTools/Surface/surfaceConfig.js.map +1 -0
  138. package/dist/cjs/tools/displayTools/Surface/surfaceDisplay.d.ts +7 -0
  139. package/dist/cjs/tools/displayTools/Surface/surfaceDisplay.js +173 -27
  140. package/dist/cjs/tools/displayTools/Surface/surfaceDisplay.js.map +1 -1
  141. package/dist/cjs/tools/displayTools/registerDisplayToolsWorker.d.ts +1 -0
  142. package/dist/cjs/tools/displayTools/registerDisplayToolsWorker.js +27 -0
  143. package/dist/cjs/tools/displayTools/registerDisplayToolsWorker.js.map +1 -0
  144. package/dist/cjs/tools/segmentation/BrushTool.js +1 -1
  145. package/dist/cjs/tools/segmentation/BrushTool.js.map +1 -1
  146. package/dist/cjs/tools/segmentation/CircleScissorsTool.js +1 -1
  147. package/dist/cjs/tools/segmentation/CircleScissorsTool.js.map +1 -1
  148. package/dist/cjs/tools/segmentation/PaintFillTool.js +1 -1
  149. package/dist/cjs/tools/segmentation/PaintFillTool.js.map +1 -1
  150. package/dist/cjs/tools/segmentation/RectangleScissorsTool.js +1 -1
  151. package/dist/cjs/tools/segmentation/RectangleScissorsTool.js.map +1 -1
  152. package/dist/cjs/tools/segmentation/SegmentSelectTool.d.ts +6 -2
  153. package/dist/cjs/tools/segmentation/SegmentSelectTool.js +45 -35
  154. package/dist/cjs/tools/segmentation/SegmentSelectTool.js.map +1 -1
  155. package/dist/cjs/tools/segmentation/SphereScissorsTool.js +1 -1
  156. package/dist/cjs/tools/segmentation/SphereScissorsTool.js.map +1 -1
  157. package/dist/cjs/tools/segmentation/strategies/BrushStrategy.js +7 -5
  158. package/dist/cjs/tools/segmentation/strategies/BrushStrategy.js.map +1 -1
  159. package/dist/cjs/tools/segmentation/strategies/compositions/regionFill.js +1 -1
  160. package/dist/cjs/tools/segmentation/strategies/compositions/regionFill.js.map +1 -1
  161. package/dist/cjs/tools/segmentation/strategies/fillSphere.js +14 -5
  162. package/dist/cjs/tools/segmentation/strategies/fillSphere.js.map +1 -1
  163. package/dist/cjs/tools/segmentation/strategies/utils/getStrategyData.js +21 -9
  164. package/dist/cjs/tools/segmentation/strategies/utils/getStrategyData.js.map +1 -1
  165. package/dist/cjs/tools/segmentation/strategies/utils/stackVolumeCheck.d.ts +5 -5
  166. package/dist/cjs/tools/segmentation/strategies/utils/stackVolumeCheck.js +15 -8
  167. package/dist/cjs/tools/segmentation/strategies/utils/stackVolumeCheck.js.map +1 -1
  168. package/dist/cjs/types/ContourSegmentationAnnotation.d.ts +0 -1
  169. package/dist/cjs/types/LabelmapTypes.d.ts +5 -1
  170. package/dist/cjs/types/PolySeg.d.ts +6 -0
  171. package/dist/cjs/types/PolySeg.js +3 -0
  172. package/dist/cjs/types/PolySeg.js.map +1 -0
  173. package/dist/cjs/types/SegmentationStateTypes.d.ts +12 -2
  174. package/dist/cjs/types/SurfaceTypes.d.ts +1 -1
  175. package/dist/cjs/types/index.d.ts +2 -1
  176. package/dist/cjs/utilities/boundingBox/getBoundingBoxAroundShape.js +6 -6
  177. package/dist/cjs/utilities/boundingBox/getBoundingBoxAroundShape.js.map +1 -1
  178. package/dist/cjs/utilities/contourSegmentation/addContourSegmentationAnnotation.d.ts +2 -0
  179. package/dist/cjs/utilities/contourSegmentation/addContourSegmentationAnnotation.js +20 -0
  180. package/dist/cjs/utilities/contourSegmentation/addContourSegmentationAnnotation.js.map +1 -0
  181. package/dist/cjs/utilities/contourSegmentation/areSameSegment.js +0 -2
  182. package/dist/cjs/utilities/contourSegmentation/areSameSegment.js.map +1 -1
  183. package/dist/cjs/utilities/contourSegmentation/index.d.ts +2 -0
  184. package/dist/cjs/utilities/contourSegmentation/index.js +5 -1
  185. package/dist/cjs/utilities/contourSegmentation/index.js.map +1 -1
  186. package/dist/cjs/utilities/contourSegmentation/removeContourSegmentationAnnotation.d.ts +2 -0
  187. package/dist/cjs/utilities/contourSegmentation/removeContourSegmentationAnnotation.js +19 -0
  188. package/dist/cjs/utilities/contourSegmentation/removeContourSegmentationAnnotation.js.map +1 -0
  189. package/dist/cjs/utilities/contours/detectContourHoles.js.map +1 -1
  190. package/dist/cjs/utilities/contours/generateContourSetsFromLabelmap.js +2 -2
  191. package/dist/cjs/utilities/contours/generateContourSetsFromLabelmap.js.map +1 -1
  192. package/dist/cjs/utilities/contours/getDeduplicatedVTKPolyDataPoints.d.ts +11 -0
  193. package/dist/cjs/utilities/contours/getDeduplicatedVTKPolyDataPoints.js +50 -0
  194. package/dist/cjs/utilities/contours/getDeduplicatedVTKPolyDataPoints.js.map +1 -0
  195. package/dist/cjs/utilities/contours/index.d.ts +2 -2
  196. package/dist/cjs/utilities/contours/index.js +3 -3
  197. package/dist/cjs/utilities/contours/index.js.map +1 -1
  198. package/dist/cjs/utilities/index.d.ts +3 -1
  199. package/dist/cjs/utilities/index.js +5 -1
  200. package/dist/cjs/utilities/index.js.map +1 -1
  201. package/dist/cjs/utilities/math/polyline/containsPoint.js.map +1 -1
  202. package/dist/cjs/utilities/math/polyline/index.d.ts +2 -1
  203. package/dist/cjs/utilities/math/polyline/index.js +3 -1
  204. package/dist/cjs/utilities/math/polyline/index.js.map +1 -1
  205. package/dist/cjs/utilities/math/polyline/isPointInsidePolyline3D.d.ts +2 -0
  206. package/dist/cjs/utilities/math/polyline/isPointInsidePolyline3D.js +34 -0
  207. package/dist/cjs/utilities/math/polyline/isPointInsidePolyline3D.js.map +1 -0
  208. package/dist/cjs/utilities/segmentation/contourAndFindLargestBidirectional.js +0 -1
  209. package/dist/cjs/utilities/segmentation/contourAndFindLargestBidirectional.js.map +1 -1
  210. package/dist/cjs/utilities/segmentation/getHoveredContourSegmentationAnnotation.d.ts +1 -0
  211. package/dist/cjs/utilities/segmentation/getHoveredContourSegmentationAnnotation.js +18 -0
  212. package/dist/cjs/utilities/segmentation/getHoveredContourSegmentationAnnotation.js.map +1 -0
  213. package/dist/cjs/utilities/segmentation/getSegmentAtLabelmapBorder.d.ts +7 -0
  214. package/dist/cjs/utilities/segmentation/getSegmentAtLabelmapBorder.js +77 -0
  215. package/dist/cjs/utilities/segmentation/getSegmentAtLabelmapBorder.js.map +1 -0
  216. package/dist/cjs/utilities/segmentation/getSegmentAtWorldPoint.d.ts +11 -0
  217. package/dist/cjs/utilities/segmentation/getSegmentAtWorldPoint.js +82 -0
  218. package/dist/cjs/utilities/segmentation/getSegmentAtWorldPoint.js.map +1 -0
  219. package/dist/cjs/utilities/segmentation/getUniqueSegmentIndices.d.ts +2 -0
  220. package/dist/cjs/utilities/segmentation/getUniqueSegmentIndices.js +59 -0
  221. package/dist/cjs/utilities/segmentation/getUniqueSegmentIndices.js.map +1 -0
  222. package/dist/cjs/utilities/segmentation/index.d.ts +5 -1
  223. package/dist/cjs/utilities/segmentation/index.js +9 -1
  224. package/dist/cjs/utilities/segmentation/index.js.map +1 -1
  225. package/dist/cjs/utilities/triggerAnnotationRenderForToolGroupIds.d.ts +2 -0
  226. package/dist/cjs/utilities/triggerAnnotationRenderForToolGroupIds.js +32 -0
  227. package/dist/cjs/utilities/triggerAnnotationRenderForToolGroupIds.js.map +1 -0
  228. package/dist/cjs/workers/clippingPlaneWorker.d.ts +1 -0
  229. package/dist/cjs/workers/clippingPlaneWorker.js +63 -0
  230. package/dist/cjs/workers/clippingPlaneWorker.js.map +1 -0
  231. package/dist/cjs/workers/polySegConverters.d.ts +1 -0
  232. package/dist/cjs/workers/polySegConverters.js +267 -0
  233. package/dist/cjs/workers/polySegConverters.js.map +1 -0
  234. package/dist/esm/enums/WorkerTypes.js +10 -0
  235. package/dist/esm/enums/WorkerTypes.js.map +1 -0
  236. package/dist/esm/enums/index.js +2 -1
  237. package/dist/esm/enums/index.js.map +1 -1
  238. package/dist/esm/eventListeners/annotations/contourSegmentation/contourSegmentationCompleted.js +7 -12
  239. package/dist/esm/eventListeners/annotations/contourSegmentation/contourSegmentationCompleted.js.map +1 -1
  240. package/dist/esm/eventListeners/segmentation/imageChangeEventListener.js +3 -3
  241. package/dist/esm/eventListeners/segmentation/imageChangeEventListener.js.map +1 -1
  242. package/dist/esm/eventListeners/segmentation/labelmap/onLabelmapSegmentationDataModified.js +59 -45
  243. package/dist/esm/eventListeners/segmentation/labelmap/onLabelmapSegmentationDataModified.js.map +1 -1
  244. package/dist/esm/stateManagement/annotation/FrameOfReferenceSpecificAnnotationManager.js +5 -0
  245. package/dist/esm/stateManagement/annotation/FrameOfReferenceSpecificAnnotationManager.js.map +1 -1
  246. package/dist/esm/stateManagement/annotation/annotationState.js +5 -1
  247. package/dist/esm/stateManagement/annotation/annotationState.js.map +1 -1
  248. package/dist/esm/stateManagement/segmentation/SegmentationStateManager.js +4 -1
  249. package/dist/esm/stateManagement/segmentation/SegmentationStateManager.js.map +1 -1
  250. package/dist/esm/stateManagement/segmentation/addRepresentationData.js +30 -0
  251. package/dist/esm/stateManagement/segmentation/addRepresentationData.js.map +1 -0
  252. package/dist/esm/stateManagement/segmentation/addSegmentationRepresentation.js +32 -15
  253. package/dist/esm/stateManagement/segmentation/addSegmentationRepresentation.js.map +1 -1
  254. package/dist/esm/stateManagement/segmentation/config/segmentationVisibility.js +1 -46
  255. package/dist/esm/stateManagement/segmentation/config/segmentationVisibility.js.map +1 -1
  256. package/dist/esm/stateManagement/segmentation/convertStackToVolumeSegmentation.js +42 -27
  257. package/dist/esm/stateManagement/segmentation/convertStackToVolumeSegmentation.js.map +1 -1
  258. package/dist/esm/stateManagement/segmentation/convertVolumeToStackSegmentation.js +49 -25
  259. package/dist/esm/stateManagement/segmentation/convertVolumeToStackSegmentation.js.map +1 -1
  260. package/dist/esm/stateManagement/segmentation/helpers/validateSegmentationInput.js +6 -6
  261. package/dist/esm/stateManagement/segmentation/helpers/validateSegmentationInput.js.map +1 -1
  262. package/dist/esm/stateManagement/segmentation/index.js +3 -1
  263. package/dist/esm/stateManagement/segmentation/index.js.map +1 -1
  264. package/dist/esm/stateManagement/segmentation/polySeg/Contour/computeAndAddContourRepresentation.js +4 -0
  265. package/dist/esm/stateManagement/segmentation/polySeg/Contour/computeAndAddContourRepresentation.js.map +1 -0
  266. package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/computeAndAddLabelmapRepresentation.js +7 -0
  267. package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/computeAndAddLabelmapRepresentation.js.map +1 -0
  268. package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/convertContourToLabelmap.js +142 -0
  269. package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/convertContourToLabelmap.js.map +1 -0
  270. package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.js +53 -0
  271. package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.js.map +1 -0
  272. package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/labelmapComputationStrategies.js +108 -0
  273. package/dist/esm/stateManagement/segmentation/polySeg/Labelmap/labelmapComputationStrategies.js.map +1 -0
  274. package/dist/esm/stateManagement/segmentation/polySeg/Surface/computeAndAddSurfaceRepresentation.js +8 -0
  275. package/dist/esm/stateManagement/segmentation/polySeg/Surface/computeAndAddSurfaceRepresentation.js.map +1 -0
  276. package/dist/esm/stateManagement/segmentation/polySeg/Surface/convertContourToSurface.js +37 -0
  277. package/dist/esm/stateManagement/segmentation/polySeg/Surface/convertContourToSurface.js.map +1 -0
  278. package/dist/esm/stateManagement/segmentation/polySeg/Surface/convertLabelmapToSurface.js +45 -0
  279. package/dist/esm/stateManagement/segmentation/polySeg/Surface/convertLabelmapToSurface.js.map +1 -0
  280. package/dist/esm/stateManagement/segmentation/polySeg/Surface/createAndCacheSurfacesFromRaw.js +41 -0
  281. package/dist/esm/stateManagement/segmentation/polySeg/Surface/createAndCacheSurfacesFromRaw.js.map +1 -0
  282. package/dist/esm/stateManagement/segmentation/polySeg/Surface/surfaceComputationStrategies.js +78 -0
  283. package/dist/esm/stateManagement/segmentation/polySeg/Surface/surfaceComputationStrategies.js.map +1 -0
  284. package/dist/esm/stateManagement/segmentation/polySeg/Surface/updateSurfaceData.js +59 -0
  285. package/dist/esm/stateManagement/segmentation/polySeg/Surface/updateSurfaceData.js.map +1 -0
  286. package/dist/esm/stateManagement/segmentation/polySeg/canComputeRequestedRepresentation.js +68 -0
  287. package/dist/esm/stateManagement/segmentation/polySeg/canComputeRequestedRepresentation.js.map +1 -0
  288. package/dist/esm/stateManagement/segmentation/polySeg/computeAndAddRepresentation.js +47 -0
  289. package/dist/esm/stateManagement/segmentation/polySeg/computeAndAddRepresentation.js.map +1 -0
  290. package/dist/esm/stateManagement/segmentation/polySeg/index.js +6 -0
  291. package/dist/esm/stateManagement/segmentation/polySeg/index.js.map +1 -0
  292. package/dist/esm/stateManagement/segmentation/polySeg/registerPolySegWorker.js +23 -0
  293. package/dist/esm/stateManagement/segmentation/polySeg/registerPolySegWorker.js.map +1 -0
  294. package/dist/esm/stateManagement/segmentation/segmentIndex.js +4 -0
  295. package/dist/esm/stateManagement/segmentation/segmentIndex.js.map +1 -1
  296. package/dist/esm/stateManagement/segmentation/segmentationState.js +28 -1
  297. package/dist/esm/stateManagement/segmentation/segmentationState.js.map +1 -1
  298. package/dist/esm/tools/ScaleOverlayTool.js +2 -1
  299. package/dist/esm/tools/ScaleOverlayTool.js.map +1 -1
  300. package/dist/esm/tools/annotation/PlanarFreehandContourSegmentationTool.js +0 -11
  301. package/dist/esm/tools/annotation/PlanarFreehandContourSegmentationTool.js.map +1 -1
  302. package/dist/esm/tools/annotation/PlanarFreehandROITool.js +1 -2
  303. package/dist/esm/tools/annotation/PlanarFreehandROITool.js.map +1 -1
  304. package/dist/esm/tools/annotation/ProbeTool.js +3 -0
  305. package/dist/esm/tools/annotation/ProbeTool.js.map +1 -1
  306. package/dist/esm/tools/annotation/planarFreehandROITool/drawLoop.js +1 -1
  307. package/dist/esm/tools/annotation/planarFreehandROITool/drawLoop.js.map +1 -1
  308. package/dist/esm/tools/annotation/planarFreehandROITool/openContourEndEditLoop.js +1 -1
  309. package/dist/esm/tools/annotation/planarFreehandROITool/openContourEndEditLoop.js.map +1 -1
  310. package/dist/esm/tools/base/AnnotationTool.js +1 -1
  311. package/dist/esm/tools/base/AnnotationTool.js.map +1 -1
  312. package/dist/esm/tools/base/BaseTool.js +1 -1
  313. package/dist/esm/tools/base/BaseTool.js.map +1 -1
  314. package/dist/esm/tools/base/ContourSegmentationBaseTool.js +24 -24
  315. package/dist/esm/tools/base/ContourSegmentationBaseTool.js.map +1 -1
  316. package/dist/esm/tools/displayTools/Contour/contourDisplay.js +10 -7
  317. package/dist/esm/tools/displayTools/Contour/contourDisplay.js.map +1 -1
  318. package/dist/esm/tools/displayTools/Contour/removeContourFromElement.js.map +1 -1
  319. package/dist/esm/tools/displayTools/Contour/vtkContour/addContourSetsToElement.js.map +1 -0
  320. package/dist/esm/tools/displayTools/Contour/{addOrUpdateContourSets.js → vtkContour/addOrUpdateVTKContourSets.js} +4 -4
  321. package/dist/esm/tools/displayTools/Contour/vtkContour/addOrUpdateVTKContourSets.js.map +1 -0
  322. package/dist/esm/tools/displayTools/Contour/vtkContour/contourConfigCache.js.map +1 -0
  323. package/dist/esm/tools/displayTools/Contour/{updateContourSets.js → vtkContour/updateVTKContourSets.js} +2 -2
  324. package/dist/esm/tools/displayTools/Contour/vtkContour/updateVTKContourSets.js.map +1 -0
  325. package/dist/esm/tools/displayTools/Contour/vtkContour/utils.js.map +1 -0
  326. package/dist/esm/tools/displayTools/Labelmap/addLabelmapToElement.js +1 -1
  327. package/dist/esm/tools/displayTools/Labelmap/addLabelmapToElement.js.map +1 -1
  328. package/dist/esm/tools/displayTools/Labelmap/index.js +2 -1
  329. package/dist/esm/tools/displayTools/Labelmap/index.js.map +1 -1
  330. package/dist/esm/tools/displayTools/Labelmap/labelmapDisplay.js +20 -2
  331. package/dist/esm/tools/displayTools/Labelmap/labelmapDisplay.js.map +1 -1
  332. package/dist/esm/tools/displayTools/Labelmap/validateLabelmap.js +33 -0
  333. package/dist/esm/tools/displayTools/Labelmap/validateLabelmap.js.map +1 -0
  334. package/dist/esm/tools/displayTools/Surface/addOrUpdateSurfaceToElement.js +106 -0
  335. package/dist/esm/tools/displayTools/Surface/addOrUpdateSurfaceToElement.js.map +1 -0
  336. package/dist/esm/tools/displayTools/Surface/surfaceConfig.js +9 -0
  337. package/dist/esm/tools/displayTools/Surface/surfaceConfig.js.map +1 -0
  338. package/dist/esm/tools/displayTools/Surface/surfaceDisplay.js +162 -28
  339. package/dist/esm/tools/displayTools/Surface/surfaceDisplay.js.map +1 -1
  340. package/dist/esm/tools/displayTools/registerDisplayToolsWorker.js +23 -0
  341. package/dist/esm/tools/displayTools/registerDisplayToolsWorker.js.map +1 -0
  342. package/dist/esm/tools/segmentation/BrushTool.js +1 -1
  343. package/dist/esm/tools/segmentation/BrushTool.js.map +1 -1
  344. package/dist/esm/tools/segmentation/CircleScissorsTool.js +1 -1
  345. package/dist/esm/tools/segmentation/CircleScissorsTool.js.map +1 -1
  346. package/dist/esm/tools/segmentation/PaintFillTool.js +1 -1
  347. package/dist/esm/tools/segmentation/PaintFillTool.js.map +1 -1
  348. package/dist/esm/tools/segmentation/RectangleScissorsTool.js +1 -1
  349. package/dist/esm/tools/segmentation/RectangleScissorsTool.js.map +1 -1
  350. package/dist/esm/tools/segmentation/SegmentSelectTool.js +47 -37
  351. package/dist/esm/tools/segmentation/SegmentSelectTool.js.map +1 -1
  352. package/dist/esm/tools/segmentation/SphereScissorsTool.js +1 -1
  353. package/dist/esm/tools/segmentation/SphereScissorsTool.js.map +1 -1
  354. package/dist/esm/tools/segmentation/strategies/BrushStrategy.js +7 -5
  355. package/dist/esm/tools/segmentation/strategies/BrushStrategy.js.map +1 -1
  356. package/dist/esm/tools/segmentation/strategies/compositions/regionFill.js +1 -1
  357. package/dist/esm/tools/segmentation/strategies/compositions/regionFill.js.map +1 -1
  358. package/dist/esm/tools/segmentation/strategies/fillSphere.js +14 -5
  359. package/dist/esm/tools/segmentation/strategies/fillSphere.js.map +1 -1
  360. package/dist/esm/tools/segmentation/strategies/utils/getStrategyData.js +21 -9
  361. package/dist/esm/tools/segmentation/strategies/utils/getStrategyData.js.map +1 -1
  362. package/dist/esm/tools/segmentation/strategies/utils/stackVolumeCheck.js +15 -7
  363. package/dist/esm/tools/segmentation/strategies/utils/stackVolumeCheck.js.map +1 -1
  364. package/dist/esm/types/PolySeg.js +2 -0
  365. package/dist/esm/types/PolySeg.js.map +1 -0
  366. package/dist/esm/utilities/boundingBox/getBoundingBoxAroundShape.js +3 -2
  367. package/dist/esm/utilities/boundingBox/getBoundingBoxAroundShape.js.map +1 -1
  368. package/dist/esm/utilities/contourSegmentation/addContourSegmentationAnnotation.js +16 -0
  369. package/dist/esm/utilities/contourSegmentation/addContourSegmentationAnnotation.js.map +1 -0
  370. package/dist/esm/utilities/contourSegmentation/areSameSegment.js +0 -2
  371. package/dist/esm/utilities/contourSegmentation/areSameSegment.js.map +1 -1
  372. package/dist/esm/utilities/contourSegmentation/index.js +2 -0
  373. package/dist/esm/utilities/contourSegmentation/index.js.map +1 -1
  374. package/dist/esm/utilities/contourSegmentation/removeContourSegmentationAnnotation.js +15 -0
  375. package/dist/esm/utilities/contourSegmentation/removeContourSegmentationAnnotation.js.map +1 -0
  376. package/dist/esm/utilities/contours/detectContourHoles.js.map +1 -1
  377. package/dist/esm/utilities/contours/generateContourSetsFromLabelmap.js +2 -2
  378. package/dist/esm/utilities/contours/generateContourSetsFromLabelmap.js.map +1 -1
  379. package/dist/esm/utilities/contours/getDeduplicatedVTKPolyDataPoints.js +46 -0
  380. package/dist/esm/utilities/contours/getDeduplicatedVTKPolyDataPoints.js.map +1 -0
  381. package/dist/esm/utilities/contours/index.js +2 -2
  382. package/dist/esm/utilities/contours/index.js.map +1 -1
  383. package/dist/esm/utilities/index.js +3 -1
  384. package/dist/esm/utilities/index.js.map +1 -1
  385. package/dist/esm/utilities/math/polyline/containsPoint.js.map +1 -1
  386. package/dist/esm/utilities/math/polyline/index.js +2 -1
  387. package/dist/esm/utilities/math/polyline/index.js.map +1 -1
  388. package/dist/esm/utilities/math/polyline/isPointInsidePolyline3D.js +27 -0
  389. package/dist/esm/utilities/math/polyline/isPointInsidePolyline3D.js.map +1 -0
  390. package/dist/esm/utilities/segmentation/contourAndFindLargestBidirectional.js +0 -1
  391. package/dist/esm/utilities/segmentation/contourAndFindLargestBidirectional.js.map +1 -1
  392. package/dist/esm/utilities/segmentation/getHoveredContourSegmentationAnnotation.js +14 -0
  393. package/dist/esm/utilities/segmentation/getHoveredContourSegmentationAnnotation.js.map +1 -0
  394. package/dist/esm/utilities/segmentation/getSegmentAtLabelmapBorder.js +73 -0
  395. package/dist/esm/utilities/segmentation/getSegmentAtLabelmapBorder.js.map +1 -0
  396. package/dist/esm/utilities/segmentation/getSegmentAtWorldPoint.js +75 -0
  397. package/dist/esm/utilities/segmentation/getSegmentAtWorldPoint.js.map +1 -0
  398. package/dist/esm/utilities/segmentation/getUniqueSegmentIndices.js +55 -0
  399. package/dist/esm/utilities/segmentation/getUniqueSegmentIndices.js.map +1 -0
  400. package/dist/esm/utilities/segmentation/index.js +5 -1
  401. package/dist/esm/utilities/segmentation/index.js.map +1 -1
  402. package/dist/esm/utilities/triggerAnnotationRenderForToolGroupIds.js +25 -0
  403. package/dist/esm/utilities/triggerAnnotationRenderForToolGroupIds.js.map +1 -0
  404. package/dist/esm/workers/clippingPlaneWorker.js +58 -0
  405. package/dist/esm/workers/clippingPlaneWorker.js.map +1 -0
  406. package/dist/esm/workers/polySegConverters.js +241 -0
  407. package/dist/esm/workers/polySegConverters.js.map +1 -0
  408. package/dist/types/enums/WorkerTypes.d.ts +9 -0
  409. package/dist/types/enums/WorkerTypes.d.ts.map +1 -0
  410. package/dist/types/enums/index.d.ts +2 -1
  411. package/dist/types/eventListeners/segmentation/imageChangeEventListener.d.ts.map +1 -1
  412. package/dist/types/eventListeners/segmentation/labelmap/onLabelmapSegmentationDataModified.d.ts.map +1 -1
  413. package/dist/types/stateManagement/annotation/FrameOfReferenceSpecificAnnotationManager.d.ts +1 -0
  414. package/dist/types/stateManagement/annotation/FrameOfReferenceSpecificAnnotationManager.d.ts.map +1 -1
  415. package/dist/types/stateManagement/annotation/annotationState.d.ts +2 -1
  416. package/dist/types/stateManagement/annotation/annotationState.d.ts.map +1 -1
  417. package/dist/types/stateManagement/segmentation/SegmentationStateManager.d.ts.map +1 -1
  418. package/dist/types/stateManagement/segmentation/addRepresentationData.d.ts +13 -0
  419. package/dist/types/stateManagement/segmentation/addRepresentationData.d.ts.map +1 -0
  420. package/dist/types/stateManagement/segmentation/addSegmentationRepresentation.d.ts.map +1 -1
  421. package/dist/types/stateManagement/segmentation/config/segmentationVisibility.d.ts.map +1 -1
  422. package/dist/types/stateManagement/segmentation/convertStackToVolumeSegmentation.d.ts +9 -2
  423. package/dist/types/stateManagement/segmentation/convertStackToVolumeSegmentation.d.ts.map +1 -1
  424. package/dist/types/stateManagement/segmentation/convertVolumeToStackSegmentation.d.ts +13 -0
  425. package/dist/types/stateManagement/segmentation/convertVolumeToStackSegmentation.d.ts.map +1 -1
  426. package/dist/types/stateManagement/segmentation/helpers/validateSegmentationInput.d.ts.map +1 -1
  427. package/dist/types/stateManagement/segmentation/index.d.ts +3 -1
  428. package/dist/types/stateManagement/segmentation/index.d.ts.map +1 -1
  429. package/dist/types/stateManagement/segmentation/polySeg/Contour/computeAndAddContourRepresentation.d.ts +3 -0
  430. package/dist/types/stateManagement/segmentation/polySeg/Contour/computeAndAddContourRepresentation.d.ts.map +1 -0
  431. package/dist/types/stateManagement/segmentation/polySeg/Labelmap/computeAndAddLabelmapRepresentation.d.ts +3 -0
  432. package/dist/types/stateManagement/segmentation/polySeg/Labelmap/computeAndAddLabelmapRepresentation.d.ts.map +1 -0
  433. package/dist/types/stateManagement/segmentation/polySeg/Labelmap/convertContourToLabelmap.d.ts +8 -0
  434. package/dist/types/stateManagement/segmentation/polySeg/Labelmap/convertContourToLabelmap.d.ts.map +1 -0
  435. package/dist/types/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.d.ts +7 -0
  436. package/dist/types/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.d.ts.map +1 -0
  437. package/dist/types/stateManagement/segmentation/polySeg/Labelmap/labelmapComputationStrategies.d.ts +7 -0
  438. package/dist/types/stateManagement/segmentation/polySeg/Labelmap/labelmapComputationStrategies.d.ts.map +1 -0
  439. package/dist/types/stateManagement/segmentation/polySeg/Surface/computeAndAddSurfaceRepresentation.d.ts +5 -0
  440. package/dist/types/stateManagement/segmentation/polySeg/Surface/computeAndAddSurfaceRepresentation.d.ts.map +1 -0
  441. package/dist/types/stateManagement/segmentation/polySeg/Surface/convertContourToSurface.d.ts +4 -0
  442. package/dist/types/stateManagement/segmentation/polySeg/Surface/convertContourToSurface.d.ts.map +1 -0
  443. package/dist/types/stateManagement/segmentation/polySeg/Surface/convertLabelmapToSurface.d.ts +4 -0
  444. package/dist/types/stateManagement/segmentation/polySeg/Surface/convertLabelmapToSurface.d.ts.map +1 -0
  445. package/dist/types/stateManagement/segmentation/polySeg/Surface/createAndCacheSurfacesFromRaw.d.ts +6 -0
  446. package/dist/types/stateManagement/segmentation/polySeg/Surface/createAndCacheSurfacesFromRaw.d.ts.map +1 -0
  447. package/dist/types/stateManagement/segmentation/polySeg/Surface/surfaceComputationStrategies.d.ts +13 -0
  448. package/dist/types/stateManagement/segmentation/polySeg/Surface/surfaceComputationStrategies.d.ts.map +1 -0
  449. package/dist/types/stateManagement/segmentation/polySeg/Surface/updateSurfaceData.d.ts +2 -0
  450. package/dist/types/stateManagement/segmentation/polySeg/Surface/updateSurfaceData.d.ts.map +1 -0
  451. package/dist/types/stateManagement/segmentation/polySeg/canComputeRequestedRepresentation.d.ts +3 -0
  452. package/dist/types/stateManagement/segmentation/polySeg/canComputeRequestedRepresentation.d.ts.map +1 -0
  453. package/dist/types/stateManagement/segmentation/polySeg/computeAndAddRepresentation.d.ts +4 -0
  454. package/dist/types/stateManagement/segmentation/polySeg/computeAndAddRepresentation.d.ts.map +1 -0
  455. package/dist/types/stateManagement/segmentation/polySeg/index.d.ts +6 -0
  456. package/dist/types/stateManagement/segmentation/polySeg/index.d.ts.map +1 -0
  457. package/dist/types/stateManagement/segmentation/polySeg/registerPolySegWorker.d.ts +2 -0
  458. package/dist/types/stateManagement/segmentation/polySeg/registerPolySegWorker.d.ts.map +1 -0
  459. package/dist/types/stateManagement/segmentation/segmentIndex.d.ts.map +1 -1
  460. package/dist/types/stateManagement/segmentation/segmentationState.d.ts +6 -1
  461. package/dist/types/stateManagement/segmentation/segmentationState.d.ts.map +1 -1
  462. package/dist/types/tools/ScaleOverlayTool.d.ts.map +1 -1
  463. package/dist/types/tools/annotation/PlanarFreehandContourSegmentationTool.d.ts +1 -2
  464. package/dist/types/tools/annotation/PlanarFreehandContourSegmentationTool.d.ts.map +1 -1
  465. package/dist/types/tools/annotation/PlanarFreehandROITool.d.ts.map +1 -1
  466. package/dist/types/tools/annotation/ProbeTool.d.ts.map +1 -1
  467. package/dist/types/tools/base/BaseTool.d.ts.map +1 -1
  468. package/dist/types/tools/base/ContourSegmentationBaseTool.d.ts +1 -2
  469. package/dist/types/tools/base/ContourSegmentationBaseTool.d.ts.map +1 -1
  470. package/dist/types/tools/displayTools/Contour/contourDisplay.d.ts.map +1 -1
  471. package/dist/types/tools/displayTools/Contour/removeContourFromElement.d.ts.map +1 -1
  472. package/dist/types/tools/displayTools/Contour/{addContourSetsToElement.d.ts → vtkContour/addContourSetsToElement.d.ts} +1 -1
  473. package/dist/types/tools/displayTools/Contour/vtkContour/addContourSetsToElement.d.ts.map +1 -0
  474. package/dist/types/tools/displayTools/Contour/vtkContour/addOrUpdateVTKContourSets.d.ts +4 -0
  475. package/dist/types/tools/displayTools/Contour/vtkContour/addOrUpdateVTKContourSets.d.ts.map +1 -0
  476. package/dist/types/tools/displayTools/Contour/vtkContour/contourConfigCache.d.ts.map +1 -0
  477. package/dist/types/tools/displayTools/Contour/vtkContour/updateVTKContourSets.d.ts +4 -0
  478. package/dist/types/tools/displayTools/Contour/vtkContour/updateVTKContourSets.d.ts.map +1 -0
  479. package/dist/types/tools/displayTools/Contour/{utils.d.ts → vtkContour/utils.d.ts} +2 -2
  480. package/dist/types/tools/displayTools/Contour/vtkContour/utils.d.ts.map +1 -0
  481. package/dist/types/tools/displayTools/Labelmap/index.d.ts +2 -1
  482. package/dist/types/tools/displayTools/Labelmap/index.d.ts.map +1 -1
  483. package/dist/types/tools/displayTools/Labelmap/labelmapDisplay.d.ts.map +1 -1
  484. package/dist/types/tools/displayTools/Labelmap/validateLabelmap.d.ts +5 -0
  485. package/dist/types/tools/displayTools/Labelmap/validateLabelmap.d.ts.map +1 -0
  486. package/dist/types/tools/displayTools/Surface/addOrUpdateSurfaceToElement.d.ts +4 -0
  487. package/dist/types/tools/displayTools/Surface/addOrUpdateSurfaceToElement.d.ts.map +1 -0
  488. package/dist/types/tools/displayTools/Surface/surfaceConfig.d.ts +4 -0
  489. package/dist/types/tools/displayTools/Surface/surfaceConfig.d.ts.map +1 -0
  490. package/dist/types/tools/displayTools/Surface/surfaceDisplay.d.ts +7 -0
  491. package/dist/types/tools/displayTools/Surface/surfaceDisplay.d.ts.map +1 -1
  492. package/dist/types/tools/displayTools/registerDisplayToolsWorker.d.ts +2 -0
  493. package/dist/types/tools/displayTools/registerDisplayToolsWorker.d.ts.map +1 -0
  494. package/dist/types/tools/segmentation/CircleScissorsTool.d.ts.map +1 -1
  495. package/dist/types/tools/segmentation/RectangleScissorsTool.d.ts.map +1 -1
  496. package/dist/types/tools/segmentation/SegmentSelectTool.d.ts +6 -2
  497. package/dist/types/tools/segmentation/SegmentSelectTool.d.ts.map +1 -1
  498. package/dist/types/tools/segmentation/SphereScissorsTool.d.ts.map +1 -1
  499. package/dist/types/tools/segmentation/strategies/BrushStrategy.d.ts.map +1 -1
  500. package/dist/types/tools/segmentation/strategies/fillSphere.d.ts.map +1 -1
  501. package/dist/types/tools/segmentation/strategies/utils/getStrategyData.d.ts.map +1 -1
  502. package/dist/types/tools/segmentation/strategies/utils/stackVolumeCheck.d.ts +5 -5
  503. package/dist/types/tools/segmentation/strategies/utils/stackVolumeCheck.d.ts.map +1 -1
  504. package/dist/types/types/ContourSegmentationAnnotation.d.ts +0 -1
  505. package/dist/types/types/ContourSegmentationAnnotation.d.ts.map +1 -1
  506. package/dist/types/types/LabelmapTypes.d.ts +5 -1
  507. package/dist/types/types/LabelmapTypes.d.ts.map +1 -1
  508. package/dist/types/types/PolySeg.d.ts +7 -0
  509. package/dist/types/types/PolySeg.d.ts.map +1 -0
  510. package/dist/types/types/SegmentationStateTypes.d.ts +12 -2
  511. package/dist/types/types/SegmentationStateTypes.d.ts.map +1 -1
  512. package/dist/types/types/SurfaceTypes.d.ts +1 -1
  513. package/dist/types/types/SurfaceTypes.d.ts.map +1 -1
  514. package/dist/types/types/index.d.ts +2 -1
  515. package/dist/types/types/index.d.ts.map +1 -1
  516. package/dist/types/utilities/boundingBox/getBoundingBoxAroundShape.d.ts.map +1 -1
  517. package/dist/types/utilities/contourSegmentation/addContourSegmentationAnnotation.d.ts +3 -0
  518. package/dist/types/utilities/contourSegmentation/addContourSegmentationAnnotation.d.ts.map +1 -0
  519. package/dist/types/utilities/contourSegmentation/areSameSegment.d.ts.map +1 -1
  520. package/dist/types/utilities/contourSegmentation/index.d.ts +2 -0
  521. package/dist/types/utilities/contourSegmentation/index.d.ts.map +1 -1
  522. package/dist/types/utilities/contourSegmentation/removeContourSegmentationAnnotation.d.ts +3 -0
  523. package/dist/types/utilities/contourSegmentation/removeContourSegmentationAnnotation.d.ts.map +1 -0
  524. package/dist/types/utilities/contours/detectContourHoles.d.ts.map +1 -1
  525. package/dist/types/utilities/contours/getDeduplicatedVTKPolyDataPoints.d.ts +12 -0
  526. package/dist/types/utilities/contours/getDeduplicatedVTKPolyDataPoints.d.ts.map +1 -0
  527. package/dist/types/utilities/contours/index.d.ts +2 -2
  528. package/dist/types/utilities/contours/index.d.ts.map +1 -1
  529. package/dist/types/utilities/index.d.ts +3 -1
  530. package/dist/types/utilities/index.d.ts.map +1 -1
  531. package/dist/types/utilities/math/polyline/containsPoint.d.ts.map +1 -1
  532. package/dist/types/utilities/math/polyline/index.d.ts +2 -1
  533. package/dist/types/utilities/math/polyline/index.d.ts.map +1 -1
  534. package/dist/types/utilities/math/polyline/isPointInsidePolyline3D.d.ts +3 -0
  535. package/dist/types/utilities/math/polyline/isPointInsidePolyline3D.d.ts.map +1 -0
  536. package/dist/types/utilities/segmentation/contourAndFindLargestBidirectional.d.ts.map +1 -1
  537. package/dist/types/utilities/segmentation/getHoveredContourSegmentationAnnotation.d.ts +2 -0
  538. package/dist/types/utilities/segmentation/getHoveredContourSegmentationAnnotation.d.ts.map +1 -0
  539. package/dist/types/utilities/segmentation/getSegmentAtLabelmapBorder.d.ts +8 -0
  540. package/dist/types/utilities/segmentation/getSegmentAtLabelmapBorder.d.ts.map +1 -0
  541. package/dist/types/utilities/segmentation/getSegmentAtWorldPoint.d.ts +12 -0
  542. package/dist/types/utilities/segmentation/getSegmentAtWorldPoint.d.ts.map +1 -0
  543. package/dist/types/utilities/segmentation/getUniqueSegmentIndices.d.ts +3 -0
  544. package/dist/types/utilities/segmentation/getUniqueSegmentIndices.d.ts.map +1 -0
  545. package/dist/types/utilities/segmentation/index.d.ts +5 -1
  546. package/dist/types/utilities/segmentation/index.d.ts.map +1 -1
  547. package/dist/types/utilities/triggerAnnotationRenderForToolGroupIds.d.ts +3 -0
  548. package/dist/types/utilities/triggerAnnotationRenderForToolGroupIds.d.ts.map +1 -0
  549. package/dist/types/workers/clippingPlaneWorker.d.ts +2 -0
  550. package/dist/types/workers/clippingPlaneWorker.d.ts.map +1 -0
  551. package/dist/types/workers/polySegConverters.d.ts +2 -0
  552. package/dist/types/workers/polySegConverters.d.ts.map +1 -0
  553. package/dist/umd/17dd54813d5acc10bf8f.wasm +0 -0
  554. package/dist/umd/444.index.js +3 -0
  555. package/dist/umd/444.index.js.LICENSE.txt +5 -0
  556. package/dist/umd/444.index.js.map +1 -0
  557. package/dist/umd/78.index.js +3 -0
  558. package/dist/umd/78.index.js.LICENSE.txt +5 -0
  559. package/dist/umd/78.index.js.map +1 -0
  560. package/dist/umd/985.index.js +2 -0
  561. package/dist/umd/985.index.js.map +1 -0
  562. package/dist/umd/index.js +1 -1
  563. package/dist/umd/index.js.map +1 -1
  564. package/package.json +5 -3
  565. package/src/enums/WorkerTypes.ts +16 -0
  566. package/src/enums/index.js +2 -0
  567. package/src/eventListeners/annotations/contourSegmentation/contourSegmentationCompleted.ts +10 -17
  568. package/src/eventListeners/segmentation/imageChangeEventListener.ts +3 -4
  569. package/src/eventListeners/segmentation/labelmap/onLabelmapSegmentationDataModified.ts +97 -69
  570. package/src/stateManagement/annotation/FrameOfReferenceSpecificAnnotationManager.ts +11 -0
  571. package/src/stateManagement/annotation/annotationState.ts +6 -0
  572. package/src/stateManagement/segmentation/SegmentationStateManager.ts +4 -1
  573. package/src/stateManagement/segmentation/addRepresentationData.ts +71 -0
  574. package/src/stateManagement/segmentation/addSegmentationRepresentation.ts +39 -16
  575. package/src/stateManagement/segmentation/config/segmentationVisibility.ts +1 -59
  576. package/src/stateManagement/segmentation/convertStackToVolumeSegmentation.ts +74 -37
  577. package/src/stateManagement/segmentation/convertVolumeToStackSegmentation.ts +102 -38
  578. package/src/stateManagement/segmentation/helpers/validateSegmentationInput.ts +13 -8
  579. package/src/stateManagement/segmentation/index.ts +9 -2
  580. package/src/stateManagement/segmentation/polySeg/Contour/computeAndAddContourRepresentation.ts +17 -0
  581. package/src/stateManagement/segmentation/polySeg/Labelmap/computeAndAddLabelmapRepresentation.ts +25 -0
  582. package/src/stateManagement/segmentation/polySeg/Labelmap/convertContourToLabelmap.ts +273 -0
  583. package/src/stateManagement/segmentation/polySeg/Labelmap/convertSurfaceToLabelmap.ts +89 -0
  584. package/src/stateManagement/segmentation/polySeg/Labelmap/labelmapComputationStrategies.ts +193 -0
  585. package/src/stateManagement/segmentation/polySeg/Surface/computeAndAddSurfaceRepresentation.ts +26 -0
  586. package/src/stateManagement/segmentation/polySeg/Surface/convertContourToSurface.ts +62 -0
  587. package/src/stateManagement/segmentation/polySeg/Surface/convertLabelmapToSurface.ts +81 -0
  588. package/src/stateManagement/segmentation/polySeg/Surface/createAndCacheSurfacesFromRaw.ts +81 -0
  589. package/src/stateManagement/segmentation/polySeg/Surface/surfaceComputationStrategies.ts +167 -0
  590. package/src/stateManagement/segmentation/polySeg/Surface/updateSurfaceData.ts +95 -0
  591. package/src/stateManagement/segmentation/polySeg/canComputeRequestedRepresentation.ts +123 -0
  592. package/src/stateManagement/segmentation/polySeg/computeAndAddRepresentation.ts +97 -0
  593. package/src/stateManagement/segmentation/polySeg/index.ts +12 -0
  594. package/src/stateManagement/segmentation/polySeg/registerPolySegWorker.ts +34 -0
  595. package/src/stateManagement/segmentation/segmentIndex.ts +5 -0
  596. package/src/stateManagement/segmentation/segmentationState.ts +62 -0
  597. package/src/tools/ScaleOverlayTool.ts +4 -1
  598. package/src/tools/annotation/PlanarFreehandContourSegmentationTool.ts +1 -22
  599. package/src/tools/annotation/PlanarFreehandROITool.ts +2 -4
  600. package/src/tools/annotation/ProbeTool.ts +4 -0
  601. package/src/tools/annotation/SplineROITool.ts +1 -1
  602. package/src/tools/annotation/planarFreehandROITool/drawLoop.ts +2 -2
  603. package/src/tools/annotation/planarFreehandROITool/openContourEndEditLoop.ts +1 -1
  604. package/src/tools/base/AnnotationTool.ts +1 -1
  605. package/src/tools/base/BaseTool.ts +1 -6
  606. package/src/tools/base/ContourBaseTool.ts +1 -1
  607. package/src/tools/base/ContourSegmentationBaseTool.ts +45 -42
  608. package/src/tools/displayTools/Contour/contourDisplay.ts +82 -9
  609. package/src/tools/displayTools/Contour/removeContourFromElement.ts +2 -0
  610. package/src/tools/displayTools/Contour/{addContourSetsToElement.ts → vtkContour/addContourSetsToElement.ts} +1 -1
  611. package/src/tools/displayTools/Contour/{addOrUpdateContourSets.ts → vtkContour/addOrUpdateVTKContourSets.ts} +4 -4
  612. package/src/tools/displayTools/Contour/{updateContourSets.ts → vtkContour/updateVTKContourSets.ts} +2 -2
  613. package/src/tools/displayTools/Contour/{utils.ts → vtkContour/utils.ts} +1 -1
  614. package/src/tools/displayTools/Labelmap/addLabelmapToElement.ts +1 -1
  615. package/src/tools/displayTools/Labelmap/index.ts +10 -1
  616. package/src/tools/displayTools/Labelmap/labelmapDisplay.ts +39 -4
  617. package/src/tools/displayTools/Labelmap/validateLabelmap.ts +71 -0
  618. package/src/tools/displayTools/Surface/addOrUpdateSurfaceToElement.ts +172 -0
  619. package/src/tools/displayTools/Surface/surfaceConfig.ts +12 -0
  620. package/src/tools/displayTools/Surface/surfaceDisplay.ts +275 -35
  621. package/src/tools/displayTools/registerDisplayToolsWorker.ts +34 -0
  622. package/src/tools/segmentation/BrushTool.ts +1 -1
  623. package/src/tools/segmentation/CircleScissorsTool.ts +3 -1
  624. package/src/tools/segmentation/PaintFillTool.ts +1 -1
  625. package/src/tools/segmentation/RectangleScissorsTool.ts +3 -1
  626. package/src/tools/segmentation/SegmentSelectTool.ts +70 -75
  627. package/src/tools/segmentation/SphereScissorsTool.ts +3 -1
  628. package/src/tools/segmentation/strategies/BrushStrategy.ts +12 -9
  629. package/src/tools/segmentation/strategies/compositions/regionFill.ts +1 -1
  630. package/src/tools/segmentation/strategies/fillSphere.ts +13 -5
  631. package/src/tools/segmentation/strategies/utils/getStrategyData.ts +30 -15
  632. package/src/tools/segmentation/strategies/utils/stackVolumeCheck.ts +24 -17
  633. package/src/types/ContourSegmentationAnnotation.ts +0 -1
  634. package/src/types/LabelmapTypes.ts +7 -1
  635. package/src/types/PolySeg.ts +7 -0
  636. package/src/types/SegmentationStateTypes.ts +20 -4
  637. package/src/types/SurfaceTypes.ts +1 -1
  638. package/src/types/index.ts +3 -0
  639. package/src/utilities/boundingBox/getBoundingBoxAroundShape.ts +4 -2
  640. package/src/utilities/contourSegmentation/addContourSegmentationAnnotation.ts +29 -0
  641. package/src/utilities/contourSegmentation/areSameSegment.ts +0 -2
  642. package/src/utilities/contourSegmentation/index.ts +2 -0
  643. package/src/utilities/contourSegmentation/removeContourSegmentationAnnotation.ts +30 -0
  644. package/src/utilities/contours/detectContourHoles.ts +2 -0
  645. package/src/utilities/contours/generateContourSetsFromLabelmap.ts +2 -2
  646. package/src/utilities/contours/getDeduplicatedVTKPolyDataPoints.ts +66 -0
  647. package/src/utilities/contours/index.ts +2 -2
  648. package/src/utilities/index.ts +4 -0
  649. package/src/utilities/math/polyline/containsPoint.ts +3 -1
  650. package/src/utilities/math/polyline/index.ts +2 -0
  651. package/src/utilities/math/polyline/isPointInsidePolyline3D.ts +56 -0
  652. package/src/utilities/segmentation/contourAndFindLargestBidirectional.ts +0 -1
  653. package/src/utilities/segmentation/getHoveredContourSegmentationAnnotation.ts +25 -0
  654. package/src/utilities/segmentation/getSegmentAtLabelmapBorder.ts +179 -0
  655. package/src/utilities/segmentation/getSegmentAtWorldPoint.ts +173 -0
  656. package/src/utilities/segmentation/getUniqueSegmentIndices.ts +76 -0
  657. package/src/utilities/segmentation/index.ts +8 -0
  658. package/src/utilities/triggerAnnotationRenderForToolGroupIds.ts +38 -0
  659. package/src/workers/clippingPlaneWorker.js +87 -0
  660. package/src/workers/polySegConverters.js +467 -0
  661. package/dist/cjs/tools/displayTools/Contour/addContourSetsToElement.js.map +0 -1
  662. package/dist/cjs/tools/displayTools/Contour/addOrUpdateContourSets.d.ts +0 -3
  663. package/dist/cjs/tools/displayTools/Contour/addOrUpdateContourSets.js +0 -14
  664. package/dist/cjs/tools/displayTools/Contour/addOrUpdateContourSets.js.map +0 -1
  665. package/dist/cjs/tools/displayTools/Contour/contourConfigCache.js.map +0 -1
  666. package/dist/cjs/tools/displayTools/Contour/updateContourSets.d.ts +0 -3
  667. package/dist/cjs/tools/displayTools/Contour/updateContourSets.js.map +0 -1
  668. package/dist/cjs/tools/displayTools/Contour/utils.js.map +0 -1
  669. package/dist/cjs/tools/displayTools/Labelmap/validateRepresentationData.d.ts +0 -3
  670. package/dist/cjs/tools/displayTools/Labelmap/validateRepresentationData.js +0 -20
  671. package/dist/cjs/tools/displayTools/Labelmap/validateRepresentationData.js.map +0 -1
  672. package/dist/cjs/tools/displayTools/Surface/addSurfaceToElement.d.ts +0 -2
  673. package/dist/cjs/tools/displayTools/Surface/addSurfaceToElement.js +0 -84
  674. package/dist/cjs/tools/displayTools/Surface/addSurfaceToElement.js.map +0 -1
  675. package/dist/cjs/utilities/contours/mergePoints.d.ts +0 -8
  676. package/dist/cjs/utilities/contours/mergePoints.js +0 -77
  677. package/dist/cjs/utilities/contours/mergePoints.js.map +0 -1
  678. package/dist/esm/tools/displayTools/Contour/addContourSetsToElement.js.map +0 -1
  679. package/dist/esm/tools/displayTools/Contour/addOrUpdateContourSets.js.map +0 -1
  680. package/dist/esm/tools/displayTools/Contour/contourConfigCache.js.map +0 -1
  681. package/dist/esm/tools/displayTools/Contour/updateContourSets.js.map +0 -1
  682. package/dist/esm/tools/displayTools/Contour/utils.js.map +0 -1
  683. package/dist/esm/tools/displayTools/Labelmap/validateRepresentationData.js +0 -18
  684. package/dist/esm/tools/displayTools/Labelmap/validateRepresentationData.js.map +0 -1
  685. package/dist/esm/tools/displayTools/Surface/addSurfaceToElement.js +0 -79
  686. package/dist/esm/tools/displayTools/Surface/addSurfaceToElement.js.map +0 -1
  687. package/dist/esm/utilities/contours/mergePoints.js +0 -73
  688. package/dist/esm/utilities/contours/mergePoints.js.map +0 -1
  689. package/dist/types/tools/displayTools/Contour/addContourSetsToElement.d.ts.map +0 -1
  690. package/dist/types/tools/displayTools/Contour/addOrUpdateContourSets.d.ts +0 -4
  691. package/dist/types/tools/displayTools/Contour/addOrUpdateContourSets.d.ts.map +0 -1
  692. package/dist/types/tools/displayTools/Contour/contourConfigCache.d.ts.map +0 -1
  693. package/dist/types/tools/displayTools/Contour/updateContourSets.d.ts +0 -4
  694. package/dist/types/tools/displayTools/Contour/updateContourSets.d.ts.map +0 -1
  695. package/dist/types/tools/displayTools/Contour/utils.d.ts.map +0 -1
  696. package/dist/types/tools/displayTools/Labelmap/validateRepresentationData.d.ts +0 -4
  697. package/dist/types/tools/displayTools/Labelmap/validateRepresentationData.d.ts.map +0 -1
  698. package/dist/types/tools/displayTools/Surface/addSurfaceToElement.d.ts +0 -3
  699. package/dist/types/tools/displayTools/Surface/addSurfaceToElement.d.ts.map +0 -1
  700. package/dist/types/utilities/contours/mergePoints.d.ts +0 -9
  701. package/dist/types/utilities/contours/mergePoints.d.ts.map +0 -1
  702. package/src/tools/displayTools/Labelmap/validateRepresentationData.ts +0 -36
  703. package/src/tools/displayTools/Surface/addSurfaceToElement.ts +0 -115
  704. package/src/utilities/contours/mergePoints.ts +0 -108
  705. /package/dist/cjs/tools/displayTools/Contour/{addContourSetsToElement.js → vtkContour/addContourSetsToElement.js} +0 -0
  706. /package/dist/cjs/tools/displayTools/Contour/{contourConfigCache.d.ts → vtkContour/contourConfigCache.d.ts} +0 -0
  707. /package/dist/cjs/tools/displayTools/Contour/{contourConfigCache.js → vtkContour/contourConfigCache.js} +0 -0
  708. /package/dist/cjs/tools/displayTools/Contour/{utils.js → vtkContour/utils.js} +0 -0
  709. /package/dist/esm/tools/displayTools/Contour/{addContourSetsToElement.js → vtkContour/addContourSetsToElement.js} +0 -0
  710. /package/dist/esm/tools/displayTools/Contour/{contourConfigCache.js → vtkContour/contourConfigCache.js} +0 -0
  711. /package/dist/esm/tools/displayTools/Contour/{utils.js → vtkContour/utils.js} +0 -0
  712. /package/dist/types/tools/displayTools/Contour/{contourConfigCache.d.ts → vtkContour/contourConfigCache.d.ts} +0 -0
  713. /package/src/tools/displayTools/Contour/{contourConfigCache.ts → vtkContour/contourConfigCache.ts} +0 -0
@@ -0,0 +1,108 @@
1
+ import { VolumeViewport, volumeLoader, utilities, } from '@cornerstonejs/core';
2
+ import { getUniqueSegmentIndices } from '../../../../utilities/segmentation';
3
+ import { getSegmentation } from '../../segmentationState';
4
+ import { convertContourToStackLabelmap, convertContourToVolumeLabelmap, } from './convertContourToLabelmap';
5
+ import { convertSurfaceToVolumeLabelmap } from './convertSurfaceToLabelmap';
6
+ import { computeStackSegmentationFromVolume } from '../../convertVolumeToStackSegmentation';
7
+ export async function computeLabelmapData(segmentationId, options = {}) {
8
+ const segmentIndices = options.segmentIndices?.length
9
+ ? options.segmentIndices
10
+ : getUniqueSegmentIndices(segmentationId);
11
+ let rawLabelmapData;
12
+ const segmentation = getSegmentation(segmentationId);
13
+ const representationData = segmentation.representationData;
14
+ try {
15
+ if (representationData.CONTOUR) {
16
+ rawLabelmapData = await computeLabelmapFromContourSegmentation(segmentationId, {
17
+ segmentIndices,
18
+ ...options,
19
+ });
20
+ }
21
+ else if (representationData.SURFACE) {
22
+ rawLabelmapData = await computeLabelmapFromSurfaceSegmentation(segmentation.segmentationId, {
23
+ segmentIndices,
24
+ ...options,
25
+ });
26
+ }
27
+ }
28
+ catch (error) {
29
+ console.error(error);
30
+ throw error;
31
+ }
32
+ if (!rawLabelmapData) {
33
+ throw new Error('Not enough data to convert to surface, currently only support converting volume labelmap to surface if available');
34
+ }
35
+ return rawLabelmapData;
36
+ }
37
+ async function computeLabelmapFromContourSegmentation(segmentationId, options = {}) {
38
+ const isVolume = options.viewport instanceof VolumeViewport ?? true;
39
+ if (isVolume && !options.viewport) {
40
+ throw new Error('Cannot compute labelmap from contour segmentation without providing the viewport');
41
+ }
42
+ const segmentIndices = options.segmentIndices?.length
43
+ ? options.segmentIndices
44
+ : getUniqueSegmentIndices(segmentationId);
45
+ const segmentation = getSegmentation(segmentationId);
46
+ const representationData = segmentation.representationData.CONTOUR;
47
+ let result;
48
+ if (isVolume) {
49
+ result = await convertContourToVolumeLabelmap(representationData, {
50
+ segmentIndices,
51
+ segmentationRepresentationUID: options.segmentationRepresentationUID,
52
+ viewport: options.viewport,
53
+ });
54
+ }
55
+ else {
56
+ result = await convertContourToStackLabelmap(representationData, {
57
+ segmentIndices,
58
+ segmentationRepresentationUID: options.segmentationRepresentationUID,
59
+ viewport: options.viewport,
60
+ });
61
+ }
62
+ return result;
63
+ }
64
+ async function computeLabelmapFromSurfaceSegmentation(segmentationId, options = {}) {
65
+ const isVolume = options.viewport instanceof VolumeViewport ?? true;
66
+ const segmentIndices = options.segmentIndices?.length
67
+ ? options.segmentIndices
68
+ : getUniqueSegmentIndices(segmentationId);
69
+ const segmentation = getSegmentation(segmentationId);
70
+ const segmentsGeometryIds = new Map();
71
+ const representationData = segmentation.representationData.SURFACE;
72
+ representationData.geometryIds.forEach((geometryId, segmentIndex) => {
73
+ if (segmentIndices.includes(segmentIndex)) {
74
+ segmentsGeometryIds.set(segmentIndex, geometryId);
75
+ }
76
+ });
77
+ if (isVolume && !options.viewport) {
78
+ throw new Error('Cannot compute labelmap from surface segmentation without providing the viewport');
79
+ }
80
+ let segmentationVolume;
81
+ if (isVolume) {
82
+ const defaultActor = options.viewport.getDefaultActor();
83
+ const { uid: volumeId } = defaultActor;
84
+ segmentationVolume =
85
+ await volumeLoader.createAndCacheDerivedSegmentationVolume(volumeId);
86
+ }
87
+ else {
88
+ const imageIds = options.viewport.getImageIds();
89
+ const volumeId = 'generatedSegmentationVolumeId';
90
+ const volumeProps = utilities.generateVolumePropsFromImageIds(imageIds, volumeId);
91
+ delete volumeProps.imageIds;
92
+ segmentationVolume = await volumeLoader.createLocalSegmentationVolume({
93
+ ...volumeProps,
94
+ scalarData: volumeProps.scalarData,
95
+ referencedImageIds: imageIds,
96
+ }, volumeId);
97
+ }
98
+ const result = await convertSurfaceToVolumeLabelmap({ geometryIds: segmentsGeometryIds }, segmentationVolume);
99
+ if (isVolume) {
100
+ return result;
101
+ }
102
+ const stackData = (await computeStackSegmentationFromVolume({
103
+ volumeId: segmentationVolume.volumeId,
104
+ }));
105
+ return stackData;
106
+ }
107
+ export { computeLabelmapFromContourSegmentation };
108
+ //# sourceMappingURL=labelmapComputationStrategies.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"labelmapComputationStrategies.js","sourceRoot":"","sources":["../../../../../../src/stateManagement/segmentation/polySeg/Labelmap/labelmapComputationStrategies.ts"],"names":[],"mappings":"AAAA,OAAO,EAEL,cAAc,EACd,YAAY,EACZ,SAAS,GACV,MAAM,qBAAqB,CAAC;AAC7B,OAAO,EAAE,uBAAuB,EAAE,MAAM,oCAAoC,CAAC;AAC7E,OAAO,EAAE,eAAe,EAAE,MAAM,yBAAyB,CAAC;AAK1D,OAAO,EACL,6BAA6B,EAC7B,8BAA8B,GAC/B,MAAM,4BAA4B,CAAC;AACpC,OAAO,EAAE,8BAA8B,EAAE,MAAM,4BAA4B,CAAC;AAC5E,OAAO,EAAE,kCAAkC,EAAE,MAAM,wCAAwC,CAAC;AAQ5F,MAAM,CAAC,KAAK,UAAU,mBAAmB,CACvC,cAAsB,EACtB,UAAoC,EAAE;IAEtC,MAAM,cAAc,GAAG,OAAO,CAAC,cAAc,EAAE,MAAM;QACnD,CAAC,CAAC,OAAO,CAAC,cAAc;QACxB,CAAC,CAAC,uBAAuB,CAAC,cAAc,CAAC,CAAC;IAE5C,IAAI,eAAgC,CAAC;IACrC,MAAM,YAAY,GAAG,eAAe,CAAC,cAAc,CAAC,CAAC;IACrD,MAAM,kBAAkB,GAAG,YAAY,CAAC,kBAAkB,CAAC;IAE3D,IAAI;QACF,IAAI,kBAAkB,CAAC,OAAO,EAAE;YAC9B,eAAe,GAAG,MAAM,sCAAsC,CAC5D,cAAc,EACd;gBACE,cAAc;gBACd,GAAG,OAAO;aACX,CACF,CAAC;SACH;aAAM,IAAI,kBAAkB,CAAC,OAAO,EAAE;YACrC,eAAe,GAAG,MAAM,sCAAsC,CAC5D,YAAY,CAAC,cAAc,EAC3B;gBACE,cAAc;gBACd,GAAG,OAAO;aACX,CACF,CAAC;SACH;KACF;IAAC,OAAO,KAAK,EAAE;QACd,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC;QACrB,MAAM,KAAK,CAAC;KACb;IAED,IAAI,CAAC,eAAe,EAAE;QACpB,MAAM,IAAI,KAAK,CACb,kHAAkH,CACnH,CAAC;KACH;IAED,OAAO,eAAe,CAAC;AACzB,CAAC;AAED,KAAK,UAAU,sCAAsC,CACnD,cAAc,EACd,UAAoC,EAAE;IAEtC,MAAM,QAAQ,GAAG,OAAO,CAAC,QAAQ,YAAY,cAAc,IAAI,IAAI,CAAC;IAEpE,IAAI,QAAQ,IAAI,CAAC,OAAO,CAAC,QAAQ,EAAE;QAMjC,MAAM,IAAI,KAAK,CACb,kFAAkF,CACnF,CAAC;KACH;IAED,MAAM,cAAc,GAAG,OAAO,CAAC,cAAc,EAAE,MAAM;QACnD,CAAC,CAAC,OAAO,CAAC,cAAc;QACxB,CAAC,CAAC,uBAAuB,CAAC,cAAc,CAAC,CAAC;IAE5C,MAAM,YAAY,GAAG,eAAe,CAAC,cAAc,CAAC,CAAC;IACrD,MAAM,kBAAkB,GAAG,YAAY,CAAC,kBAAkB,CAAC,OAAO,CAAC;IAEnE,IAAI,MAAM,CAAC;IAEX,IAAI,QAAQ,EAAE;QACZ,MAAM,GAAG,MAAM,8BAA8B,CAAC,kBAAkB,EAAE;YAChE,cAAc;YACd,6BAA6B,EAAE,OAAO,CAAC,6BAA6B;YACpE,QAAQ,EAAE,OAAO,CAAC,QAAQ;SAC3B,CAAC,CAAC;KACJ;SAAM;QACL,MAAM,GAAG,MAAM,6BAA6B,CAAC,kBAAkB,EAAE;YAC/D,cAAc;YACd,6BAA6B,EAAE,OAAO,CAAC,6BAA6B;YACpE,QAAQ,EAAE,OAAO,CAAC,QAAQ;SAC3B,CAAC,CAAC;KACJ;IAED,OAAO,MAAM,CAAC;AAChB,CAAC;AAED,KAAK,UAAU,sCAAsC,CACnD,cAAc,EACd,UAAoC,EAAE;IAEtC,MAAM,QAAQ,GAAG,OAAO,CAAC,QAAQ,YAAY,cAAc,IAAI,IAAI,CAAC;IAEpE,MAAM,cAAc,GAAG,OAAO,CAAC,cAAc,EAAE,MAAM;QACnD,CAAC,CAAC,OAAO,CAAC,cAAc;QACxB,CAAC,CAAC,uBAAuB,CAAC,cAAc,CAAC,CAAC;IAE5C,MAAM,YAAY,GAAG,eAAe,CAAC,cAAc,CAAC,CAAC;IAErD,MAAM,mBAAmB,GAAG,IAAI,GAAG,EAAyB,CAAC;IAC7D,MAAM,kBAAkB,GAAG,YAAY,CAAC,kBAAkB,CAAC,OAAO,CAAC;IACnE,kBAAkB,CAAC,WAAW,CAAC,OAAO,CAAC,CAAC,UAAU,EAAE,YAAY,EAAE,EAAE;QAClE,IAAI,cAAc,CAAC,QAAQ,CAAC,YAAY,CAAC,EAAE;YACzC,mBAAmB,CAAC,GAAG,CAAC,YAAY,EAAE,UAAU,CAAC,CAAC;SACnD;IACH,CAAC,CAAC,CAAC;IAEH,IAAI,QAAQ,IAAI,CAAC,OAAO,CAAC,QAAQ,EAAE;QAMjC,MAAM,IAAI,KAAK,CACb,kFAAkF,CACnF,CAAC;KACH;IAED,IAAI,kBAAkB,CAAC;IACvB,IAAI,QAAQ,EAAE;QACZ,MAAM,YAAY,GAAG,OAAO,CAAC,QAAQ,CAAC,eAAe,EAAE,CAAC;QACxD,MAAM,EAAE,GAAG,EAAE,QAAQ,EAAE,GAAG,YAAY,CAAC;QACvC,kBAAkB;YAChB,MAAM,YAAY,CAAC,uCAAuC,CAAC,QAAQ,CAAC,CAAC;KACxE;SAAM;QAKL,MAAM,QAAQ,GAAI,OAAO,CAAC,QAAiC,CAAC,WAAW,EAAE,CAAC;QAC1E,MAAM,QAAQ,GAAG,+BAA+B,CAAC;QACjD,MAAM,WAAW,GAAG,SAAS,CAAC,+BAA+B,CAC3D,QAAQ,EACR,QAAQ,CACT,CAAC;QAIF,OAAO,WAAW,CAAC,QAAQ,CAAC;QAE5B,kBAAkB,GAAG,MAAM,YAAY,CAAC,6BAA6B,CACnE;YACE,GAAG,WAAW;YACd,UAAU,EAAE,WAAW,CAAC,UAAiC;YACzD,kBAAkB,EAAE,QAAQ;SAC7B,EACD,QAAQ,CACT,CAAC;KACH;IAED,MAAM,MAAM,GAAG,MAAM,8BAA8B,CACjD,EAAE,WAAW,EAAE,mBAAmB,EAAE,EACpC,kBAAkB,CACnB,CAAC;IAEF,IAAI,QAAQ,EAAE;QACZ,OAAO,MAAM,CAAC;KACf;IAGD,MAAM,SAAS,GAAG,CAAC,MAAM,kCAAkC,CAAC;QAC1D,QAAQ,EAAE,kBAAkB,CAAC,QAAQ;KACtC,CAAC,CAAkC,CAAC;IAErC,OAAO,SAAS,CAAC;AACnB,CAAC;AAED,OAAO,EAAE,sCAAsC,EAAE,CAAC"}
@@ -0,0 +1,8 @@
1
+ import { SegmentationRepresentations } from '../../../../enums';
2
+ import { computeAndAddRepresentation } from '../computeAndAddRepresentation';
3
+ import { computeSurfaceData } from './surfaceComputationStrategies';
4
+ import { updateSurfaceData } from './updateSurfaceData';
5
+ export function computeAndAddSurfaceRepresentation(segmentationId, options = {}) {
6
+ return computeAndAddRepresentation(segmentationId, SegmentationRepresentations.Surface, () => computeSurfaceData(segmentationId, options), () => updateSurfaceData(segmentationId));
7
+ }
8
+ //# sourceMappingURL=computeAndAddSurfaceRepresentation.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"computeAndAddSurfaceRepresentation.js","sourceRoot":"","sources":["../../../../../../src/stateManagement/segmentation/polySeg/Surface/computeAndAddSurfaceRepresentation.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,2BAA2B,EAAE,MAAM,mBAAmB,CAAC;AAEhE,OAAO,EAAE,2BAA2B,EAAE,MAAM,gCAAgC,CAAC;AAC7E,OAAO,EAAE,kBAAkB,EAAE,MAAM,gCAAgC,CAAC;AACpE,OAAO,EAAE,iBAAiB,EAAE,MAAM,qBAAqB,CAAC;AAWxD,MAAM,UAAU,kCAAkC,CAChD,cAAsB,EACtB,UAAoC,EAAE;IAEtC,OAAO,2BAA2B,CAChC,cAAc,EACd,2BAA2B,CAAC,OAAO,EACnC,GAAG,EAAE,CAAC,kBAAkB,CAAC,cAAc,EAAE,OAAO,CAAC,EACjD,GAAG,EAAE,CAAC,iBAAiB,CAAC,cAAc,CAAC,CACxC,CAAC;AACJ,CAAC"}
@@ -0,0 +1,37 @@
1
+ import { Enums, eventTarget, triggerEvent } from '@cornerstonejs/core';
2
+ import { getWebWorkerManager } from '@cornerstonejs/core';
3
+ import { getAnnotation } from '../../../annotation/annotationState';
4
+ import { WorkerTypes } from '../../../../enums';
5
+ const workerManager = getWebWorkerManager();
6
+ const triggerWorkerProgress = (eventTarget, progress) => {
7
+ triggerEvent(eventTarget, Enums.Events.WEB_WORKER_PROGRESS, {
8
+ progress,
9
+ type: WorkerTypes.POLYSEG_CONTOUR_TO_SURFACE,
10
+ });
11
+ };
12
+ export async function convertContourToSurface(contourRepresentationData, segmentIndex) {
13
+ const { annotationUIDsMap } = contourRepresentationData;
14
+ const polylines = [];
15
+ const numPointsArray = [];
16
+ const annotationUIDs = annotationUIDsMap.get(segmentIndex);
17
+ for (const annotationUID of annotationUIDs) {
18
+ const annotation = getAnnotation(annotationUID);
19
+ const { polyline } = annotation.data.contour;
20
+ numPointsArray.push(polyline.length);
21
+ polyline.forEach((polyline) => polylines.push(...polyline));
22
+ }
23
+ triggerWorkerProgress(eventTarget, 0);
24
+ const results = await workerManager.executeTask('polySeg', 'convertContourToSurface', {
25
+ polylines,
26
+ numPointsArray,
27
+ }, {
28
+ callbacks: [
29
+ (progress) => {
30
+ triggerWorkerProgress(eventTarget, progress);
31
+ },
32
+ ],
33
+ });
34
+ triggerWorkerProgress(eventTarget, 100);
35
+ return results;
36
+ }
37
+ //# sourceMappingURL=convertContourToSurface.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"convertContourToSurface.js","sourceRoot":"","sources":["../../../../../../src/stateManagement/segmentation/polySeg/Surface/convertContourToSurface.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,KAAK,EAAS,WAAW,EAAE,YAAY,EAAE,MAAM,qBAAqB,CAAC;AAC9E,OAAO,EAAE,mBAAmB,EAAE,MAAM,qBAAqB,CAAC;AAE1D,OAAO,EAAE,aAAa,EAAE,MAAM,qCAAqC,CAAC;AACpE,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAEhD,MAAM,aAAa,GAAG,mBAAmB,EAAE,CAAC;AAE5C,MAAM,qBAAqB,GAAG,CAAC,WAAW,EAAE,QAAQ,EAAE,EAAE;IACtD,YAAY,CAAC,WAAW,EAAE,KAAK,CAAC,MAAM,CAAC,mBAAmB,EAAE;QAC1D,QAAQ;QACR,IAAI,EAAE,WAAW,CAAC,0BAA0B;KAC7C,CAAC,CAAC;AACL,CAAC,CAAC;AASF,MAAM,CAAC,KAAK,UAAU,uBAAuB,CAC3C,yBAAkD,EAClD,YAAoB;IAEpB,MAAM,EAAE,iBAAiB,EAAE,GAAG,yBAAyB,CAAC;IAGxD,MAAM,SAAS,GAAG,EAAE,CAAC;IACrB,MAAM,cAAc,GAAG,EAAE,CAAC;IAC1B,MAAM,cAAc,GAAG,iBAAiB,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC;IAE3D,KAAK,MAAM,aAAa,IAAI,cAAc,EAAE;QAC1C,MAAM,UAAU,GAAG,aAAa,CAAC,aAAa,CAAC,CAAC;QAChD,MAAM,EAAE,QAAQ,EAAE,GAAG,UAAU,CAAC,IAAI,CAAC,OAAO,CAAC;QAC7C,cAAc,CAAC,IAAI,CAAC,QAAQ,CAAC,MAAM,CAAC,CAAC;QACrC,QAAQ,CAAC,OAAO,CAAC,CAAC,QAAQ,EAAE,EAAE,CAAC,SAAS,CAAC,IAAI,CAAC,GAAG,QAAQ,CAAC,CAAC,CAAC;KAC7D;IAED,qBAAqB,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC;IAEtC,MAAM,OAAO,GAAG,MAAM,aAAa,CAAC,WAAW,CAC7C,SAAS,EACT,yBAAyB,EACzB;QACE,SAAS;QACT,cAAc;KACf,EACD;QACE,SAAS,EAAE;YACT,CAAC,QAAQ,EAAE,EAAE;gBACX,qBAAqB,CAAC,WAAW,EAAE,QAAQ,CAAC,CAAC;YAC/C,CAAC;SACF;KACF,CACF,CAAC;IAEF,qBAAqB,CAAC,WAAW,EAAE,GAAG,CAAC,CAAC;IAExC,OAAO,OAAO,CAAC;AACjB,CAAC"}
@@ -0,0 +1,45 @@
1
+ import { cache, eventTarget, triggerEvent, Enums, } from '@cornerstonejs/core';
2
+ import { getWebWorkerManager } from '@cornerstonejs/core';
3
+ import { computeVolumeSegmentationFromStack } from '../../convertStackToVolumeSegmentation';
4
+ import { WorkerTypes } from '../../../../enums';
5
+ const workerManager = getWebWorkerManager();
6
+ const triggerWorkerProgress = (eventTarget, progress) => {
7
+ triggerEvent(eventTarget, Enums.Events.WEB_WORKER_PROGRESS, {
8
+ progress,
9
+ type: WorkerTypes.POLYSEG_LABELMAP_TO_SURFACE,
10
+ });
11
+ };
12
+ export async function convertLabelmapToSurface(labelmapRepresentationData, segmentIndex, isVolume = true) {
13
+ let volumeId;
14
+ if (isVolume) {
15
+ volumeId = labelmapRepresentationData
16
+ .volumeId;
17
+ }
18
+ else {
19
+ const { imageIdReferenceMap } = labelmapRepresentationData;
20
+ ({ volumeId } = await computeVolumeSegmentationFromStack({
21
+ imageIdReferenceMap,
22
+ }));
23
+ }
24
+ const volume = cache.getVolume(volumeId);
25
+ const scalarData = volume.getScalarData();
26
+ const { dimensions, spacing, origin, direction } = volume;
27
+ triggerWorkerProgress(eventTarget, 0);
28
+ const results = await workerManager.executeTask('polySeg', 'convertLabelmapToSurface', {
29
+ scalarData,
30
+ dimensions,
31
+ spacing,
32
+ origin,
33
+ direction,
34
+ segmentIndex,
35
+ }, {
36
+ callbacks: [
37
+ (progress) => {
38
+ triggerWorkerProgress(eventTarget, progress);
39
+ },
40
+ ],
41
+ });
42
+ triggerWorkerProgress(eventTarget, 100);
43
+ return results;
44
+ }
45
+ //# sourceMappingURL=convertLabelmapToSurface.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"convertLabelmapToSurface.js","sourceRoot":"","sources":["../../../../../../src/stateManagement/segmentation/polySeg/Surface/convertLabelmapToSurface.ts"],"names":[],"mappings":"AAAA,OAAO,EAEL,KAAK,EACL,WAAW,EACX,YAAY,EACZ,KAAK,GACN,MAAM,qBAAqB,CAAC;AAC7B,OAAO,EAAE,mBAAmB,EAAE,MAAM,qBAAqB,CAAC;AAM1D,OAAO,EAAE,kCAAkC,EAAE,MAAM,wCAAwC,CAAC;AAC5F,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAEhD,MAAM,aAAa,GAAG,mBAAmB,EAAE,CAAC;AAE5C,MAAM,qBAAqB,GAAG,CAAC,WAAW,EAAE,QAAQ,EAAE,EAAE;IACtD,YAAY,CAAC,WAAW,EAAE,KAAK,CAAC,MAAM,CAAC,mBAAmB,EAAE;QAC1D,QAAQ;QACR,IAAI,EAAE,WAAW,CAAC,2BAA2B;KAC9C,CAAC,CAAC;AACL,CAAC,CAAC;AAUF,MAAM,CAAC,KAAK,UAAU,wBAAwB,CAC5C,0BAAoD,EACpD,YAAoB,EACpB,QAAQ,GAAG,IAAI;IAEf,IAAI,QAAQ,CAAC;IACb,IAAI,QAAQ,EAAE;QACZ,QAAQ,GAAI,0BAA6D;aACtE,QAAQ,CAAC;KACb;SAAM;QACL,MAAM,EAAE,mBAAmB,EAAE,GAC3B,0BAA2D,CAAC;QAC9D,CAAC,EAAE,QAAQ,EAAE,GAAG,MAAM,kCAAkC,CAAC;YACvD,mBAAmB;SACpB,CAAC,CAAC,CAAC;KACL;IAED,MAAM,MAAM,GAAG,KAAK,CAAC,SAAS,CAAC,QAAQ,CAAC,CAAC;IAEzC,MAAM,UAAU,GAAG,MAAM,CAAC,aAAa,EAAE,CAAC;IAC1C,MAAM,EAAE,UAAU,EAAE,OAAO,EAAE,MAAM,EAAE,SAAS,EAAE,GAAG,MAAM,CAAC;IAE1D,qBAAqB,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC;IAEtC,MAAM,OAAO,GAAG,MAAM,aAAa,CAAC,WAAW,CAC7C,SAAS,EACT,0BAA0B,EAC1B;QACE,UAAU;QACV,UAAU;QACV,OAAO;QACP,MAAM;QACN,SAAS;QACT,YAAY;KACb,EACD;QACE,SAAS,EAAE;YACT,CAAC,QAAQ,EAAE,EAAE;gBACX,qBAAqB,CAAC,WAAW,EAAE,QAAQ,CAAC,CAAC;YAC/C,CAAC;SACF;KACF,CACF,CAAC;IAEF,qBAAqB,CAAC,WAAW,EAAE,GAAG,CAAC,CAAC;IAExC,OAAO,OAAO,CAAC;AACjB,CAAC"}
@@ -0,0 +1,41 @@
1
+ import { Enums, geometryLoader } from '@cornerstonejs/core';
2
+ import { getColorForSegmentIndex } from '../../config/segmentationColor';
3
+ import { findSegmentationRepresentationByUID, getSegmentation, } from '../../segmentationState';
4
+ export async function createAndCacheSurfacesFromRaw(segmentationId, rawSurfacesData, options = {}) {
5
+ let segmentationRepresentation, toolGroupId;
6
+ if (options.segmentationRepresentationUID) {
7
+ ({ segmentationRepresentation, toolGroupId } =
8
+ findSegmentationRepresentationByUID(options.segmentationRepresentationUID));
9
+ }
10
+ const segmentation = getSegmentation(segmentationId);
11
+ const geometryIds = new Map();
12
+ const promises = Object.keys(rawSurfacesData).map(async (index) => {
13
+ const rawSurfaceData = rawSurfacesData[index];
14
+ const segmentIndex = rawSurfaceData.segmentIndex;
15
+ const color = segmentationRepresentation;
16
+ getColorForSegmentIndex(toolGroupId, segmentationRepresentation.segmentationRepresentationUID, segmentIndex).slice(0, 3);
17
+ if (!color) {
18
+ throw new Error('No color found for segment index, unable to create surface');
19
+ }
20
+ const closedSurface = {
21
+ id: `segmentation_${segmentation.segmentationId}_surface_${segmentIndex}`,
22
+ color,
23
+ frameOfReferenceUID: 'test-frameOfReferenceUID',
24
+ data: {
25
+ points: rawSurfaceData.data.points,
26
+ polys: rawSurfaceData.data.polys,
27
+ },
28
+ };
29
+ const geometryId = closedSurface.id;
30
+ geometryIds.set(segmentIndex, geometryId);
31
+ return geometryLoader.createAndCacheGeometry(geometryId, {
32
+ type: Enums.GeometryType.SURFACE,
33
+ geometryData: closedSurface,
34
+ });
35
+ });
36
+ await Promise.all(promises);
37
+ return {
38
+ geometryIds,
39
+ };
40
+ }
41
+ //# sourceMappingURL=createAndCacheSurfacesFromRaw.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"createAndCacheSurfacesFromRaw.js","sourceRoot":"","sources":["../../../../../../src/stateManagement/segmentation/polySeg/Surface/createAndCacheSurfacesFromRaw.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,KAAK,EAAS,cAAc,EAAE,MAAM,qBAAqB,CAAC;AACnE,OAAO,EAAE,uBAAuB,EAAE,MAAM,gCAAgC,CAAC;AACzE,OAAO,EACL,mCAAmC,EACnC,eAAe,GAChB,MAAM,yBAAyB,CAAC;AAcjC,MAAM,CAAC,KAAK,UAAU,6BAA6B,CACjD,cAAsB,EACtB,eAAgC,EAChC,UAAoC,EAAE;IAGtC,IAAI,0BAA+B,EAAE,WAAgB,CAAC;IACtD,IAAI,OAAO,CAAC,6BAA6B,EAAE;QACzC,CAAC,EAAE,0BAA0B,EAAE,WAAW,EAAE;YAC1C,mCAAmC,CACjC,OAAO,CAAC,6BAA6B,CACtC,CAAC,CAAC;KACN;IAED,MAAM,YAAY,GAAG,eAAe,CAAC,cAAc,CAAC,CAAC;IAErD,MAAM,WAAW,GAAG,IAAI,GAAG,EAAkB,CAAC;IAG9C,MAAM,QAAQ,GAAG,MAAM,CAAC,IAAI,CAAC,eAAe,CAAC,CAAC,GAAG,CAAC,KAAK,EAAE,KAAa,EAAE,EAAE;QACxE,MAAM,cAAc,GAAG,eAAe,CAAC,KAAK,CAAC,CAAC;QAC9C,MAAM,YAAY,GAAG,cAAc,CAAC,YAAY,CAAC;QAGjD,MAAM,KAAK,GAAG,0BAA0B,CAAC;QACzC,uBAAuB,CACrB,WAAW,EACX,0BAA0B,CAAC,6BAA6B,EACxD,YAAY,CACb,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;QAEd,IAAI,CAAC,KAAK,EAAE;YACV,MAAM,IAAI,KAAK,CACb,4DAA4D,CAC7D,CAAC;SACH;QAED,MAAM,aAAa,GAAG;YACpB,EAAE,EAAE,gBAAgB,YAAY,CAAC,cAAc,YAAY,YAAY,EAAE;YACzE,KAAK;YACL,mBAAmB,EAAE,0BAA0B;YAC/C,IAAI,EAAE;gBACJ,MAAM,EAAE,cAAc,CAAC,IAAI,CAAC,MAAM;gBAClC,KAAK,EAAE,cAAc,CAAC,IAAI,CAAC,KAAK;aACjC;SACF,CAAC;QAEF,MAAM,UAAU,GAAG,aAAa,CAAC,EAAE,CAAC;QACpC,WAAW,CAAC,GAAG,CAAC,YAAY,EAAE,UAAU,CAAC,CAAC;QAE1C,OAAO,cAAc,CAAC,sBAAsB,CAAC,UAAU,EAAE;YACvD,IAAI,EAAE,KAAK,CAAC,YAAY,CAAC,OAAO;YAChC,YAAY,EAAE,aAAwC;SACvD,CAAC,CAAC;IACL,CAAC,CAAC,CAAC;IAEH,MAAM,OAAO,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC;IAE5B,OAAO;QACL,WAAW;KACZ,CAAC;AACJ,CAAC"}
@@ -0,0 +1,78 @@
1
+ import { getUniqueSegmentIndices } from '../../../../utilities/segmentation';
2
+ import { getSegmentation } from '../../segmentationState';
3
+ import { convertContourToSurface } from './convertContourToSurface';
4
+ import { createAndCacheSurfacesFromRaw } from './createAndCacheSurfacesFromRaw';
5
+ import { isVolumeSegmentation } from '../../../../tools/segmentation/strategies/utils/stackVolumeCheck';
6
+ import { convertLabelmapToSurface } from './convertLabelmapToSurface';
7
+ export async function computeSurfaceData(segmentationId, options = {}) {
8
+ const segmentIndices = options.segmentIndices?.length
9
+ ? options.segmentIndices
10
+ : getUniqueSegmentIndices(segmentationId);
11
+ let rawSurfacesData;
12
+ const segmentation = getSegmentation(segmentationId);
13
+ const representationData = segmentation.representationData;
14
+ try {
15
+ if (representationData.CONTOUR) {
16
+ rawSurfacesData = await computeSurfaceFromContourSegmentation(segmentationId, {
17
+ segmentIndices,
18
+ ...options,
19
+ });
20
+ }
21
+ else if (representationData.LABELMAP) {
22
+ rawSurfacesData = await computeSurfaceFromLabelmapSegmentation(segmentation.segmentationId, {
23
+ segmentIndices,
24
+ ...options,
25
+ });
26
+ }
27
+ }
28
+ catch (error) {
29
+ console.error(error);
30
+ throw error;
31
+ }
32
+ if (!rawSurfacesData) {
33
+ throw new Error('Not enough data to convert to surface, currently only support converting volume labelmap to surface if available');
34
+ }
35
+ const surfacesData = await createAndCacheSurfacesFromRaw(segmentationId, rawSurfacesData, options);
36
+ return surfacesData;
37
+ }
38
+ async function computeSurfaceFromLabelmapSegmentation(segmentationId, options = {}) {
39
+ const segmentation = getSegmentation(segmentationId);
40
+ if (!segmentation?.representationData?.LABELMAP) {
41
+ console.warn('Only support surface update from labelmaps');
42
+ return;
43
+ }
44
+ const isVolume = isVolumeSegmentation(segmentation.representationData.LABELMAP);
45
+ const labelmapRepresentationData = segmentation.representationData.LABELMAP;
46
+ const segmentIndices = options.segmentIndices || getUniqueSegmentIndices(segmentationId);
47
+ const promises = segmentIndices.map((index) => {
48
+ const surface = convertLabelmapToSurface(labelmapRepresentationData, index, isVolume);
49
+ return surface;
50
+ });
51
+ const surfaces = await Promise.allSettled(promises);
52
+ const errors = surfaces.filter((p) => p.status === 'rejected');
53
+ if (errors.length > 0) {
54
+ console.error(errors);
55
+ throw new Error('Failed to convert labelmap to surface');
56
+ }
57
+ const rawSurfacesData = surfaces
58
+ .map((surface, index) => {
59
+ if (surface.status === 'fulfilled') {
60
+ return { segmentIndex: segmentIndices[index], data: surface.value };
61
+ }
62
+ })
63
+ .filter(Boolean);
64
+ return rawSurfacesData;
65
+ }
66
+ async function computeSurfaceFromContourSegmentation(segmentationId, options = {}) {
67
+ const segmentation = getSegmentation(segmentationId);
68
+ const contourRepresentationData = segmentation.representationData.CONTOUR;
69
+ const segmentIndices = options.segmentIndices || getUniqueSegmentIndices(segmentationId);
70
+ const promises = segmentIndices.map(async (index) => {
71
+ const surface = await convertContourToSurface(contourRepresentationData, index);
72
+ return { segmentIndex: index, data: surface };
73
+ });
74
+ const surfaces = await Promise.all(promises);
75
+ return surfaces;
76
+ }
77
+ export { computeSurfaceFromContourSegmentation, computeSurfaceFromLabelmapSegmentation, };
78
+ //# sourceMappingURL=surfaceComputationStrategies.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"surfaceComputationStrategies.js","sourceRoot":"","sources":["../../../../../../src/stateManagement/segmentation/polySeg/Surface/surfaceComputationStrategies.ts"],"names":[],"mappings":"AAKA,OAAO,EAAE,uBAAuB,EAAE,MAAM,oCAAoC,CAAC;AAC7E,OAAO,EAAE,eAAe,EAAE,MAAM,yBAAyB,CAAC;AAC1D,OAAO,EAAE,uBAAuB,EAAE,MAAM,2BAA2B,CAAC;AACpE,OAAO,EAAE,6BAA6B,EAAE,MAAM,iCAAiC,CAAC;AAMhF,OAAO,EAAE,oBAAoB,EAAE,MAAM,kEAAkE,CAAC;AACxG,OAAO,EAAE,wBAAwB,EAAE,MAAM,4BAA4B,CAAC;AActE,MAAM,CAAC,KAAK,UAAU,kBAAkB,CACtC,cAAsB,EACtB,UAAoC,EAAE;IAEtC,MAAM,cAAc,GAAG,OAAO,CAAC,cAAc,EAAE,MAAM;QACnD,CAAC,CAAC,OAAO,CAAC,cAAc;QACxB,CAAC,CAAC,uBAAuB,CAAC,cAAc,CAAC,CAAC;IAE5C,IAAI,eAAgC,CAAC;IACrC,MAAM,YAAY,GAAG,eAAe,CAAC,cAAc,CAAC,CAAC;IACrD,MAAM,kBAAkB,GAAG,YAAY,CAAC,kBAAkB,CAAC;IAE3D,IAAI;QACF,IAAI,kBAAkB,CAAC,OAAO,EAAE;YAC9B,eAAe,GAAG,MAAM,qCAAqC,CAC3D,cAAc,EACd;gBACE,cAAc;gBACd,GAAG,OAAO;aACX,CACF,CAAC;SACH;aAAM,IAAI,kBAAkB,CAAC,QAAoC,EAAE;YAElE,eAAe,GAAG,MAAM,sCAAsC,CAC5D,YAAY,CAAC,cAAc,EAC3B;gBACE,cAAc;gBACd,GAAG,OAAO;aACX,CACF,CAAC;SACH;KACF;IAAC,OAAO,KAAK,EAAE;QACd,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC;QACrB,MAAM,KAAK,CAAC;KACb;IAED,IAAI,CAAC,eAAe,EAAE;QACpB,MAAM,IAAI,KAAK,CACb,kHAAkH,CACnH,CAAC;KACH;IAED,MAAM,YAAY,GAAG,MAAM,6BAA6B,CACtD,cAAc,EACd,eAAe,EACf,OAAO,CACR,CAAC;IAEF,OAAO,YAAY,CAAC;AACtB,CAAC;AAED,KAAK,UAAU,sCAAsC,CACnD,cAAc,EACd,UAAoC,EAAE;IAGtC,MAAM,YAAY,GAAG,eAAe,CAAC,cAAc,CAAC,CAAC;IAErD,IAAI,CAAC,YAAY,EAAE,kBAAkB,EAAE,QAAQ,EAAE;QAC/C,OAAO,CAAC,IAAI,CAAC,4CAA4C,CAAC,CAAC;QAC3D,OAAO;KACR;IAED,MAAM,QAAQ,GAAG,oBAAoB,CACnC,YAAY,CAAC,kBAAkB,CAAC,QAAQ,CACzC,CAAC;IAEF,MAAM,0BAA0B,GAAG,YAAY,CAAC,kBAAkB,CAAC,QAAQ,CAAC;IAE5E,MAAM,cAAc,GAClB,OAAO,CAAC,cAAc,IAAI,uBAAuB,CAAC,cAAc,CAAC,CAAC;IAEpE,MAAM,QAAQ,GAAG,cAAc,CAAC,GAAG,CAAC,CAAC,KAAK,EAAE,EAAE;QAC5C,MAAM,OAAO,GAAG,wBAAwB,CACtC,0BAEiC,EACjC,KAAK,EACL,QAAQ,CACT,CAAC;QAEF,OAAO,OAAO,CAAC;IACjB,CAAC,CAAC,CAAC;IAEH,MAAM,QAAQ,GAAG,MAAM,OAAO,CAAC,UAAU,CAAC,QAAQ,CAAC,CAAC;IACpD,MAAM,MAAM,GAAG,QAAQ,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,MAAM,KAAK,UAAU,CAAC,CAAC;IAE/D,IAAI,MAAM,CAAC,MAAM,GAAG,CAAC,EAAE;QACrB,OAAO,CAAC,KAAK,CAAC,MAAM,CAAC,CAAC;QACtB,MAAM,IAAI,KAAK,CAAC,uCAAuC,CAAC,CAAC;KAC1D;IAED,MAAM,eAAe,GAAG,QAAQ;SAC7B,GAAG,CAAC,CAAC,OAAO,EAAE,KAAK,EAAE,EAAE;QACtB,IAAI,OAAO,CAAC,MAAM,KAAK,WAAW,EAAE;YAClC,OAAO,EAAE,YAAY,EAAE,cAAc,CAAC,KAAK,CAAC,EAAE,IAAI,EAAE,OAAO,CAAC,KAAK,EAAE,CAAC;SACrE;IACH,CAAC,CAAC;SACD,MAAM,CAAC,OAAO,CAAC,CAAC;IAEnB,OAAO,eAAe,CAAC;AACzB,CAAC;AAQD,KAAK,UAAU,qCAAqC,CAClD,cAAsB,EACtB,UAAoC,EAAE;IAEtC,MAAM,YAAY,GAAG,eAAe,CAAC,cAAc,CAAC,CAAC;IAErD,MAAM,yBAAyB,GAAG,YAAY,CAAC,kBAAkB,CAAC,OAAO,CAAC;IAE1E,MAAM,cAAc,GAClB,OAAO,CAAC,cAAc,IAAI,uBAAuB,CAAC,cAAc,CAAC,CAAC;IAEpE,MAAM,QAAQ,GAAG,cAAc,CAAC,GAAG,CAAC,KAAK,EAAE,KAAK,EAAE,EAAE;QAClD,MAAM,OAAO,GAAG,MAAM,uBAAuB,CAC3C,yBAAoD,EACpD,KAAK,CACN,CAAC;QAEF,OAAO,EAAE,YAAY,EAAE,KAAK,EAAE,IAAI,EAAE,OAAO,EAAE,CAAC;IAChD,CAAC,CAAC,CAAC;IAEH,MAAM,QAAQ,GAAG,MAAM,OAAO,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC;IAE7C,OAAO,QAAQ,CAAC;AAClB,CAAC;AAED,OAAO,EACL,qCAAqC,EACrC,sCAAsC,GACvC,CAAC"}
@@ -0,0 +1,59 @@
1
+ import { cache } from '@cornerstonejs/core';
2
+ import { getUniqueSegmentIndices } from '../../../../utilities/segmentation';
3
+ import { getSegmentation, getSegmentationRepresentations, getToolGroupIdsWithSegmentation, } from '../../segmentationState';
4
+ import { triggerSegmentationModified } from '../../triggerSegmentationEvents';
5
+ import { SegmentationRepresentations } from '../../../../enums';
6
+ import { computeSurfaceFromLabelmapSegmentation } from './surfaceComputationStrategies';
7
+ import { createAndCacheSurfacesFromRaw } from './createAndCacheSurfacesFromRaw';
8
+ export async function updateSurfaceData(segmentationId) {
9
+ const surfacesObj = await computeSurfaceFromLabelmapSegmentation(segmentationId);
10
+ if (!surfacesObj) {
11
+ return;
12
+ }
13
+ const segmentation = getSegmentation(segmentationId);
14
+ const indices = getUniqueSegmentIndices(segmentationId);
15
+ if (!indices.length) {
16
+ const geometryIds = segmentation.representationData.SURFACE.geometryIds;
17
+ geometryIds.forEach((geometryId) => {
18
+ const geometry = cache.getGeometry(geometryId);
19
+ const surface = geometry.data;
20
+ surface.setPoints([]);
21
+ surface.setPolys([]);
22
+ });
23
+ triggerSegmentationModified(segmentationId);
24
+ return;
25
+ }
26
+ const promises = surfacesObj.map(({ data, segmentIndex }) => {
27
+ const geometryId = `segmentation_${segmentationId}_surface_${segmentIndex}`;
28
+ const geometry = cache.getGeometry(geometryId);
29
+ if (!geometry) {
30
+ const toolGroupIds = getToolGroupIdsWithSegmentation(segmentationId);
31
+ return toolGroupIds.map((toolGroupId) => {
32
+ const segmentationRepresentations = getSegmentationRepresentations(toolGroupId);
33
+ return segmentationRepresentations.map((segmentationRepresentation) => {
34
+ if (segmentationRepresentation.type !==
35
+ SegmentationRepresentations.Surface) {
36
+ return;
37
+ }
38
+ segmentation.representationData.SURFACE.geometryIds.set(segmentIndex, geometryId);
39
+ return createAndCacheSurfacesFromRaw(segmentationId, [{ segmentIndex, data }], {
40
+ segmentationRepresentationUID: segmentationRepresentation.segmentationRepresentationUID,
41
+ });
42
+ });
43
+ });
44
+ }
45
+ else if (indices.includes(segmentIndex)) {
46
+ const surface = geometry.data;
47
+ surface.setPoints(data.points);
48
+ surface.setPolys(data.polys);
49
+ }
50
+ else {
51
+ const surface = geometry.data;
52
+ surface.setPoints([]);
53
+ surface.setPolys([]);
54
+ }
55
+ });
56
+ await Promise.all(promises);
57
+ triggerSegmentationModified(segmentationId);
58
+ }
59
+ //# sourceMappingURL=updateSurfaceData.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"updateSurfaceData.js","sourceRoot":"","sources":["../../../../../../src/stateManagement/segmentation/polySeg/Surface/updateSurfaceData.ts"],"names":[],"mappings":"AAAA,OAAO,EAAS,KAAK,EAAE,MAAM,qBAAqB,CAAC;AACnD,OAAO,EAAE,uBAAuB,EAAE,MAAM,oCAAoC,CAAC;AAC7E,OAAO,EACL,eAAe,EACf,8BAA8B,EAC9B,+BAA+B,GAChC,MAAM,yBAAyB,CAAC;AACjC,OAAO,EAAE,2BAA2B,EAAE,MAAM,iCAAiC,CAAC;AAE9E,OAAO,EAAE,2BAA2B,EAAE,MAAM,mBAAmB,CAAC;AAChE,OAAO,EAAE,sCAAsC,EAAE,MAAM,gCAAgC,CAAC;AACxF,OAAO,EAAE,6BAA6B,EAAE,MAAM,iCAAiC,CAAC;AAEhF,MAAM,CAAC,KAAK,UAAU,iBAAiB,CAAC,cAAc;IACpD,MAAM,WAAW,GAAG,MAAM,sCAAsC,CAC9D,cAAc,CACf,CAAC;IAEF,IAAI,CAAC,WAAW,EAAE;QAChB,OAAO;KACR;IAED,MAAM,YAAY,GAAG,eAAe,CAAC,cAAc,CAAC,CAAC;IACrD,MAAM,OAAO,GAAG,uBAAuB,CAAC,cAAc,CAAC,CAAC;IAExD,IAAI,CAAC,OAAO,CAAC,MAAM,EAAE;QAGnB,MAAM,WAAW,GAAG,YAAY,CAAC,kBAAkB,CAAC,OAAO,CAAC,WAAW,CAAC;QACxE,WAAW,CAAC,OAAO,CAAC,CAAC,UAAU,EAAE,EAAE;YACjC,MAAM,QAAQ,GAAG,KAAK,CAAC,WAAW,CAAC,UAAU,CAAC,CAAC;YAC/C,MAAM,OAAO,GAAG,QAAQ,CAAC,IAAsB,CAAC;YAChD,OAAO,CAAC,SAAS,CAAC,EAAE,CAAC,CAAC;YACtB,OAAO,CAAC,QAAQ,CAAC,EAAE,CAAC,CAAC;QACvB,CAAC,CAAC,CAAC;QAEH,2BAA2B,CAAC,cAAc,CAAC,CAAC;QAE5C,OAAO;KACR;IAED,MAAM,QAAQ,GAAG,WAAW,CAAC,GAAG,CAAC,CAAC,EAAE,IAAI,EAAE,YAAY,EAAE,EAAE,EAAE;QAC1D,MAAM,UAAU,GAAG,gBAAgB,cAAc,YAAY,YAAY,EAAE,CAAC;QAE5E,MAAM,QAAQ,GAAG,KAAK,CAAC,WAAW,CAAC,UAAU,CAAC,CAAC;QAE/C,IAAI,CAAC,QAAQ,EAAE;YAGb,MAAM,YAAY,GAAG,+BAA+B,CAAC,cAAc,CAAC,CAAC;YAErE,OAAO,YAAY,CAAC,GAAG,CAAC,CAAC,WAAW,EAAE,EAAE;gBACtC,MAAM,2BAA2B,GAAG,8BAA8B,CAChE,WAAW,CACwB,CAAC;gBAEtC,OAAO,2BAA2B,CAAC,GAAG,CAAC,CAAC,0BAA0B,EAAE,EAAE;oBACpE,IACE,0BAA0B,CAAC,IAAI;wBAC/B,2BAA2B,CAAC,OAAO,EACnC;wBACA,OAAO;qBACR;oBACD,YAAY,CAAC,kBAAkB,CAAC,OAAO,CAAC,WAAW,CAAC,GAAG,CACrD,YAAY,EACZ,UAAU,CACX,CAAC;oBAEF,OAAO,6BAA6B,CAClC,cAAc,EACd,CAAC,EAAE,YAAY,EAAE,IAAI,EAAE,CAAC,EACxB;wBACE,6BAA6B,EAC3B,0BAA0B,CAAC,6BAA6B;qBAC3D,CACF,CAAC;gBACJ,CAAC,CAAC,CAAC;YACL,CAAC,CAAC,CAAC;SACJ;aAAM,IAAI,OAAO,CAAC,QAAQ,CAAC,YAAY,CAAC,EAAE;YAGzC,MAAM,OAAO,GAAG,QAAQ,CAAC,IAAsB,CAAC;YAChD,OAAO,CAAC,SAAS,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC;YAC/B,OAAO,CAAC,QAAQ,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;SAC9B;aAAM;YACL,MAAM,OAAO,GAAG,QAAQ,CAAC,IAAsB,CAAC;YAChD,OAAO,CAAC,SAAS,CAAC,EAAE,CAAC,CAAC;YACtB,OAAO,CAAC,QAAQ,CAAC,EAAE,CAAC,CAAC;SACtB;IACH,CAAC,CAAC,CAAC;IAEH,MAAM,OAAO,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC;IAE5B,2BAA2B,CAAC,cAAc,CAAC,CAAC;AAC9C,CAAC"}
@@ -0,0 +1,68 @@
1
+ import { SegmentationRepresentations } from '../../../enums';
2
+ import { validateLabelmap } from '../../../tools/displayTools/Labelmap';
3
+ import { findSegmentationRepresentationByUID, getSegmentation, } from '../segmentationState';
4
+ const conversionPaths = new Map([
5
+ [
6
+ SegmentationRepresentations.Labelmap,
7
+ new Set([
8
+ SegmentationRepresentations.Surface,
9
+ SegmentationRepresentations.Contour,
10
+ ]),
11
+ ],
12
+ [
13
+ SegmentationRepresentations.Contour,
14
+ new Set([
15
+ SegmentationRepresentations.Labelmap,
16
+ SegmentationRepresentations.Surface,
17
+ ]),
18
+ ],
19
+ [
20
+ SegmentationRepresentations.Surface,
21
+ new Set([SegmentationRepresentations.Labelmap]),
22
+ ],
23
+ ]);
24
+ function canComputeRequestedRepresentation(segmentationRepresentationUID) {
25
+ const representationInfo = findSegmentationRepresentationByUID(segmentationRepresentationUID);
26
+ if (!representationInfo?.segmentationRepresentation) {
27
+ return false;
28
+ }
29
+ const { segmentationRepresentation } = representationInfo;
30
+ const { type: representationType, polySeg } = segmentationRepresentation;
31
+ if (!polySeg || !polySeg.enabled) {
32
+ return false;
33
+ }
34
+ const { representationData } = getSegmentation(segmentationRepresentation.segmentationId);
35
+ const existingRepresentationTypes = getExistingRepresentationTypes(representationData);
36
+ return existingRepresentationTypes.some((existingRepresentationType) => canConvertFromTo(existingRepresentationType, representationType));
37
+ }
38
+ function getExistingRepresentationTypes(representationData) {
39
+ const supportedTypes = [];
40
+ Object.keys(representationData).forEach((representationType) => {
41
+ const representationTypeData = representationData[representationType];
42
+ let validateFn;
43
+ switch (representationType) {
44
+ case SegmentationRepresentations.Labelmap:
45
+ validateFn = validateLabelmap;
46
+ break;
47
+ }
48
+ if (validateFn) {
49
+ try {
50
+ validateFn(representationTypeData);
51
+ supportedTypes.push(representationType);
52
+ }
53
+ catch (error) {
54
+ console.warn(`Validation failed for labelmap of type ${representationType}`);
55
+ }
56
+ }
57
+ else {
58
+ supportedTypes.push(representationType);
59
+ }
60
+ });
61
+ return supportedTypes;
62
+ }
63
+ async function canConvertFromTo(fromRepresentationType, toRepresentationType) {
64
+ return (conversionPaths.get(fromRepresentationType)?.has(toRepresentationType) ||
65
+ false);
66
+ }
67
+ export { canComputeRequestedRepresentation };
68
+ //# sourceMappingURL=canComputeRequestedRepresentation.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"canComputeRequestedRepresentation.js","sourceRoot":"","sources":["../../../../../src/stateManagement/segmentation/polySeg/canComputeRequestedRepresentation.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,2BAA2B,EAAE,MAAM,gBAAgB,CAAC;AAC7D,OAAO,EAAE,gBAAgB,EAAE,MAAM,sCAAsC,CAAC;AAExE,OAAO,EACL,mCAAmC,EACnC,eAAe,GAChB,MAAM,sBAAsB,CAAC;AAI9B,MAAM,eAAe,GAAG,IAAI,GAAG,CAG7B;IACA;QACE,2BAA2B,CAAC,QAAQ;QACpC,IAAI,GAAG,CAAC;YACN,2BAA2B,CAAC,OAAO;YACnC,2BAA2B,CAAC,OAAO;SACpC,CAAC;KACH;IACD;QACE,2BAA2B,CAAC,OAAO;QACnC,IAAI,GAAG,CAAC;YACN,2BAA2B,CAAC,QAAQ;YACpC,2BAA2B,CAAC,OAAO;SACpC,CAAC;KACH;IACD;QACE,2BAA2B,CAAC,OAAO;QACnC,IAAI,GAAG,CAAC,CAAC,2BAA2B,CAAC,QAAQ,CAAC,CAAC;KAChD;CACF,CAAC,CAAC;AAaH,SAAS,iCAAiC,CACxC,6BAAqC;IAErC,MAAM,kBAAkB,GAAG,mCAAmC,CAC5D,6BAA6B,CAC9B,CAAC;IAEF,IAAI,CAAC,kBAAkB,EAAE,0BAA0B,EAAE;QACnD,OAAO,KAAK,CAAC;KACd;IAED,MAAM,EAAE,0BAA0B,EAAE,GAAG,kBAAkB,CAAC;IAC1D,MAAM,EAAE,IAAI,EAAE,kBAAkB,EAAE,OAAO,EAAE,GAAG,0BAA0B,CAAC;IAEzE,IAAI,CAAC,OAAO,IAAI,CAAC,OAAO,CAAC,OAAO,EAAE;QAChC,OAAO,KAAK,CAAC;KACd;IAED,MAAM,EAAE,kBAAkB,EAAE,GAAG,eAAe,CAC5C,0BAA0B,CAAC,cAAc,CAC1C,CAAC;IAEF,MAAM,2BAA2B,GAC/B,8BAA8B,CAAC,kBAAkB,CAAC,CAAC;IAErD,OAAO,2BAA2B,CAAC,IAAI,CAAC,CAAC,0BAA0B,EAAE,EAAE,CACrE,gBAAgB,CAAC,0BAA0B,EAAE,kBAAkB,CAAC,CACjE,CAAC;AACJ,CAAC;AASD,SAAS,8BAA8B,CACrC,kBAAkD;IAElD,MAAM,cAAc,GAAa,EAAE,CAAC;IAEpC,MAAM,CAAC,IAAI,CAAC,kBAAkB,CAAC,CAAC,OAAO,CAAC,CAAC,kBAAkB,EAAE,EAAE;QAC7D,MAAM,sBAAsB,GAAG,kBAAkB,CAAC,kBAAkB,CAAC,CAAC;QAEtE,IAAI,UAAU,CAAC;QACf,QAAQ,kBAAkB,EAAE;YAC1B,KAAK,2BAA2B,CAAC,QAAQ;gBACvC,UAAU,GAAG,gBAAgB,CAAC;gBAC9B,MAAM;SAET;QAED,IAAI,UAAU,EAAE;YACd,IAAI;gBACF,UAAU,CAAC,sBAAsB,CAAC,CAAC;gBACnC,cAAc,CAAC,IAAI,CAAC,kBAAkB,CAAC,CAAC;aACzC;YAAC,OAAO,KAAK,EAAE;gBACd,OAAO,CAAC,IAAI,CACV,0CAA0C,kBAAkB,EAAE,CAC/D,CAAC;aACH;SACF;aAAM;YACL,cAAc,CAAC,IAAI,CAAC,kBAAkB,CAAC,CAAC;SACzC;IACH,CAAC,CAAC,CAAC;IAEH,OAAO,cAAc,CAAC;AACxB,CAAC;AAED,KAAK,UAAU,gBAAgB,CAAC,sBAAsB,EAAE,oBAAoB;IAC1E,OAAO,CACL,eAAe,CAAC,GAAG,CAAC,sBAAsB,CAAC,EAAE,GAAG,CAAC,oBAAoB,CAAC;QACtE,KAAK,CACN,CAAC;AACJ,CAAC;AAED,OAAO,EAAE,iCAAiC,EAAE,CAAC"}
@@ -0,0 +1,47 @@
1
+ import { eventTarget } from '@cornerstonejs/core';
2
+ import { Events } from '../../../enums';
3
+ import addRepresentationData from '../addRepresentationData';
4
+ import { triggerSegmentationModified } from '../triggerSegmentationEvents';
5
+ import { debounce } from '../../../utilities';
6
+ import { registerPolySegWorker } from './registerPolySegWorker';
7
+ const computedRepresentations = new Map();
8
+ async function computeAndAddRepresentation(segmentationId, representationType, computeFunction, updateFunction) {
9
+ registerPolySegWorker();
10
+ const data = await computeFunction();
11
+ addRepresentationData({
12
+ segmentationId,
13
+ type: representationType,
14
+ data: { ...data },
15
+ });
16
+ if (!computedRepresentations.has(segmentationId)) {
17
+ computedRepresentations.set(segmentationId, []);
18
+ }
19
+ const representations = computedRepresentations.get(segmentationId);
20
+ if (!representations.includes(representationType)) {
21
+ representations.push(representationType);
22
+ }
23
+ subscribeToSegmentationChanges(updateFunction);
24
+ triggerSegmentationModified(segmentationId);
25
+ return data;
26
+ }
27
+ function subscribeToSegmentationChanges(updateFunction) {
28
+ const debouncedUpdateFunction = (event) => {
29
+ _debouncedSegmentationModified(event, updateFunction);
30
+ };
31
+ updateFunction._debouncedUpdateFunction = debouncedUpdateFunction;
32
+ eventTarget.removeEventListener(Events.SEGMENTATION_DATA_MODIFIED, updateFunction._debouncedUpdateFunction);
33
+ eventTarget.addEventListener(Events.SEGMENTATION_DATA_MODIFIED, updateFunction._debouncedUpdateFunction);
34
+ }
35
+ const _debouncedSegmentationModified = debounce((event, updateFunction) => {
36
+ const segmentationId = event.detail.segmentationId;
37
+ const representations = computedRepresentations.get(segmentationId);
38
+ if (!representations || !representations.length) {
39
+ return;
40
+ }
41
+ updateFunction(segmentationId);
42
+ if (representations.length) {
43
+ triggerSegmentationModified(segmentationId);
44
+ }
45
+ }, 300);
46
+ export { computeAndAddRepresentation };
47
+ //# sourceMappingURL=computeAndAddRepresentation.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"computeAndAddRepresentation.js","sourceRoot":"","sources":["../../../../../src/stateManagement/segmentation/polySeg/computeAndAddRepresentation.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,WAAW,EAAE,MAAM,qBAAqB,CAAC;AAClD,OAAO,EAAE,MAAM,EAA+B,MAAM,gBAAgB,CAAC;AACrE,OAAO,qBAAqB,MAAM,0BAA0B,CAAC;AAC7D,OAAO,EAAE,2BAA2B,EAAE,MAAM,8BAA8B,CAAC;AAC3E,OAAO,EAAE,QAAQ,EAAE,MAAM,oBAAoB,CAAC;AAC9C,OAAO,EAAE,qBAAqB,EAAE,MAAM,yBAAyB,CAAC;AAEhE,MAAM,uBAAuB,GAAG,IAAI,GAAG,EAGpC,CAAC;AAYJ,KAAK,UAAU,2BAA2B,CACxC,cAAsB,EACtB,kBAA+C,EAC/C,eAAiC,EACjC,cAA2B;IAG3B,qBAAqB,EAAE,CAAC;IAGxB,MAAM,IAAI,GAAG,MAAM,eAAe,EAAE,CAAC;IAGrC,qBAAqB,CAAC;QACpB,cAAc;QACd,IAAI,EAAE,kBAAkB;QACxB,IAAI,EAAE,EAAE,GAAG,IAAI,EAAE;KAClB,CAAC,CAAC;IAGH,IAAI,CAAC,uBAAuB,CAAC,GAAG,CAAC,cAAc,CAAC,EAAE;QAChD,uBAAuB,CAAC,GAAG,CAAC,cAAc,EAAE,EAAE,CAAC,CAAC;KACjD;IAED,MAAM,eAAe,GAAG,uBAAuB,CAAC,GAAG,CAAC,cAAc,CAAC,CAAC;IACpE,IAAI,CAAC,eAAe,CAAC,QAAQ,CAAC,kBAAkB,CAAC,EAAE;QACjD,eAAe,CAAC,IAAI,CAAC,kBAAkB,CAAC,CAAC;KAC1C;IAGD,8BAA8B,CAAC,cAAc,CAAC,CAAC;IAG/C,2BAA2B,CAAC,cAAc,CAAC,CAAC;IAE5C,OAAO,IAAI,CAAC;AACd,CAAC;AAMD,SAAS,8BAA8B,CAAC,cAAc;IACpD,MAAM,uBAAuB,GAAG,CAAC,KAAK,EAAE,EAAE;QACxC,8BAA8B,CAAC,KAAK,EAAE,cAAc,CAAC,CAAC;IACxD,CAAC,CAAC;IAEF,cAAc,CAAC,wBAAwB,GAAG,uBAAuB,CAAC;IAElE,WAAW,CAAC,mBAAmB,CAC7B,MAAM,CAAC,0BAA0B,EACjC,cAAc,CAAC,wBAAwB,CACxC,CAAC;IAEF,WAAW,CAAC,gBAAgB,CAC1B,MAAM,CAAC,0BAA0B,EACjC,cAAc,CAAC,wBAAwB,CACxC,CAAC;AACJ,CAAC;AAED,MAAM,8BAA8B,GAAG,QAAQ,CAAC,CAAC,KAAK,EAAE,cAAc,EAAE,EAAE;IACxE,MAAM,cAAc,GAAG,KAAK,CAAC,MAAM,CAAC,cAAc,CAAC;IACnD,MAAM,eAAe,GAAG,uBAAuB,CAAC,GAAG,CAAC,cAAc,CAAC,CAAC;IACpE,IAAI,CAAC,eAAe,IAAI,CAAC,eAAe,CAAC,MAAM,EAAE;QAC/C,OAAO;KACR;IAED,cAAc,CAAC,cAAc,CAAC,CAAC;IAE/B,IAAI,eAAe,CAAC,MAAM,EAAE;QAC1B,2BAA2B,CAAC,cAAc,CAAC,CAAC;KAC7C;AACH,CAAC,EAAE,GAAG,CAAC,CAAC;AAER,OAAO,EAAE,2BAA2B,EAAE,CAAC"}
@@ -0,0 +1,6 @@
1
+ import { computeAndAddSurfaceRepresentation } from './Surface/computeAndAddSurfaceRepresentation';
2
+ import { computeAndAddLabelmapRepresentation } from './Labelmap/computeAndAddLabelmapRepresentation';
3
+ import { computeAndAddContourRepresentation } from './Contour/computeAndAddContourRepresentation';
4
+ import { canComputeRequestedRepresentation } from './canComputeRequestedRepresentation';
5
+ export { canComputeRequestedRepresentation, computeAndAddSurfaceRepresentation, computeAndAddLabelmapRepresentation, computeAndAddContourRepresentation, };
6
+ //# sourceMappingURL=index.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../../src/stateManagement/segmentation/polySeg/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,kCAAkC,EAAE,MAAM,8CAA8C,CAAC;AAClG,OAAO,EAAE,mCAAmC,EAAE,MAAM,gDAAgD,CAAC;AACrG,OAAO,EAAE,kCAAkC,EAAE,MAAM,8CAA8C,CAAC;AAClG,OAAO,EAAE,iCAAiC,EAAE,MAAM,qCAAqC,CAAC;AAExF,OAAO,EACL,iCAAiC,EAEjC,kCAAkC,EAClC,mCAAmC,EACnC,kCAAkC,GACnC,CAAC"}
@@ -0,0 +1,23 @@
1
+ import { getWebWorkerManager } from '@cornerstonejs/core';
2
+ let registered = false;
3
+ export function registerPolySegWorker() {
4
+ if (registered) {
5
+ return;
6
+ }
7
+ registered = true;
8
+ const workerFn = () => {
9
+ return new Worker(new URL('../../../workers/polySegConverters', import.meta.url), {
10
+ name: 'polySeg',
11
+ });
12
+ };
13
+ const workerManager = getWebWorkerManager();
14
+ const options = {
15
+ maxWorkerInstances: 1,
16
+ autoTerminateOnIdle: {
17
+ enabled: true,
18
+ idleTimeThreshold: 2000,
19
+ },
20
+ };
21
+ workerManager.registerWorker('polySeg', workerFn, options);
22
+ }
23
+ //# sourceMappingURL=registerPolySegWorker.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"registerPolySegWorker.js","sourceRoot":"","sources":["../../../../../src/stateManagement/segmentation/polySeg/registerPolySegWorker.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,mBAAmB,EAAE,MAAM,qBAAqB,CAAC;AAE1D,IAAI,UAAU,GAAG,KAAK,CAAC;AAEvB,MAAM,UAAU,qBAAqB;IACnC,IAAI,UAAU,EAAE;QACd,OAAO;KACR;IAED,UAAU,GAAG,IAAI,CAAC;IAElB,MAAM,QAAQ,GAAG,GAAG,EAAE;QAEpB,OAAO,IAAI,MAAM,CAEf,IAAI,GAAG,CAAC,oCAAoC,EAAE,MAAM,CAAC,IAAI,CAAC,GAAG,CAAC,EAC9D;YACE,IAAI,EAAE,SAAS;SAChB,CACF,CAAC;IACJ,CAAC,CAAC;IAEF,MAAM,aAAa,GAAG,mBAAmB,EAAE,CAAC;IAE5C,MAAM,OAAO,GAAG;QACd,kBAAkB,EAAE,CAAC;QACrB,mBAAmB,EAAE;YACnB,OAAO,EAAE,IAAI;YACb,iBAAiB,EAAE,IAAI;SACxB;KACF,CAAC;IAEF,aAAa,CAAC,cAAc,CAAC,SAAS,EAAE,QAAQ,EAAE,OAAO,CAAC,CAAC;AAC7D,CAAC"}
@@ -3,6 +3,10 @@ import { getSegmentation, getToolGroupIdsWithSegmentation, } from './segmentatio
3
3
  import { triggerSegmentationModified } from './triggerSegmentationEvents';
4
4
  function setActiveSegmentIndex(segmentationId, segmentIndex) {
5
5
  const segmentation = getSegmentation(segmentationId);
6
+ if (typeof segmentIndex === 'string') {
7
+ console.warn('segmentIndex is a string, converting to number');
8
+ segmentIndex = Number(segmentIndex);
9
+ }
6
10
  if (segmentation?.activeSegmentIndex !== segmentIndex) {
7
11
  segmentation.activeSegmentIndex = segmentIndex;
8
12
  triggerSegmentationModified(segmentationId);
@@ -1 +1 @@
1
- {"version":3,"file":"segmentIndex.js","sourceRoot":"","sources":["../../../../src/stateManagement/segmentation/segmentIndex.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,qBAAqB,EAAE,MAAM,+BAA+B,CAAC;AACtE,OAAO,EACL,eAAe,EACf,+BAA+B,GAChC,MAAM,qBAAqB,CAAC;AAC7B,OAAO,EAAE,2BAA2B,EAAE,MAAM,6BAA6B,CAAC;AAY1E,SAAS,qBAAqB,CAC5B,cAAsB,EACtB,YAAoB;IAEpB,MAAM,YAAY,GAAG,eAAe,CAAC,cAAc,CAAC,CAAC;IAErD,IAAI,YAAY,EAAE,kBAAkB,KAAK,YAAY,EAAE;QACrD,YAAY,CAAC,kBAAkB,GAAG,YAAY,CAAC;QAE/C,2BAA2B,CAAC,cAAc,CAAC,CAAC;KAC7C;IAID,MAAM,UAAU,GAAG,+BAA+B,CAAC,cAAc,CAAC,CAAC;IACnE,UAAU,CAAC,OAAO,CAAC,CAAC,WAAW,EAAE,EAAE;QACjC,qBAAqB,CAAC,WAAW,CAAC,CAAC;IACrC,CAAC,CAAC,CAAC;AACL,CAAC;AAOD,SAAS,qBAAqB,CAAC,cAAsB;IACnD,MAAM,YAAY,GAAG,eAAe,CAAC,cAAc,CAAC,CAAC;IAErD,IAAI,YAAY,EAAE;QAChB,OAAO,YAAY,CAAC,kBAAkB,CAAC;KACxC;AACH,CAAC;AAED,OAAO,EAAE,qBAAqB,EAAE,qBAAqB,EAAE,CAAC"}
1
+ {"version":3,"file":"segmentIndex.js","sourceRoot":"","sources":["../../../../src/stateManagement/segmentation/segmentIndex.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,qBAAqB,EAAE,MAAM,+BAA+B,CAAC;AACtE,OAAO,EACL,eAAe,EACf,+BAA+B,GAChC,MAAM,qBAAqB,CAAC;AAC7B,OAAO,EAAE,2BAA2B,EAAE,MAAM,6BAA6B,CAAC;AAY1E,SAAS,qBAAqB,CAC5B,cAAsB,EACtB,YAAoB;IAEpB,MAAM,YAAY,GAAG,eAAe,CAAC,cAAc,CAAC,CAAC;IAErD,IAAI,OAAO,YAAY,KAAK,QAAQ,EAAE;QACpC,OAAO,CAAC,IAAI,CAAC,gDAAgD,CAAC,CAAC;QAC/D,YAAY,GAAG,MAAM,CAAC,YAAY,CAAC,CAAC;KACrC;IAED,IAAI,YAAY,EAAE,kBAAkB,KAAK,YAAY,EAAE;QACrD,YAAY,CAAC,kBAAkB,GAAG,YAAY,CAAC;QAE/C,2BAA2B,CAAC,cAAc,CAAC,CAAC;KAC7C;IAID,MAAM,UAAU,GAAG,+BAA+B,CAAC,cAAc,CAAC,CAAC;IACnE,UAAU,CAAC,OAAO,CAAC,CAAC,WAAW,EAAE,EAAE;QACjC,qBAAqB,CAAC,WAAW,CAAC,CAAC;IACrC,CAAC,CAAC,CAAC;AACL,CAAC;AAOD,SAAS,qBAAqB,CAAC,cAAsB;IACnD,MAAM,YAAY,GAAG,eAAe,CAAC,cAAc,CAAC,CAAC;IAErD,IAAI,YAAY,EAAE;QAChB,OAAO,YAAY,CAAC,kBAAkB,CAAC;KACxC;AACH,CAAC;AAED,OAAO,EAAE,qBAAqB,EAAE,qBAAqB,EAAE,CAAC"}