@cornerstonejs/tools 1.13.1 → 1.13.3

package/dist/esm/tools/segmentation/strategies/fillCircle.js.map

@@ -1 +1 @@
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+{"version":3,"file":"fillCircle.js","sourceRoot":"","sources":["../../../../../src/tools/segmentation/strategies/fillCircle.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AAEjC,OAAO,EAAE,SAAS,IAAI,OAAO,EAAE,MAAM,qBAAqB,CAAC;AAE3D,OAAO,EACL,uBAAuB,EACvB,cAAc,GACf,MAAM,iCAAiC,CAAC;AACzC,OAAO,EAAE,yBAAyB,EAAE,MAAM,gCAAgC,CAAC;AAC3E,OAAO,EAAE,+BAA+B,EAAE,MAAM,iEAAiE,CAAC;AAClH,OAAO,EAAE,oBAAoB,EAAE,MAAM,oBAAoB,CAAC;AAC1D,OAAO,iBAAiB,MAAM,2BAA2B,CAAC;AAE1D,MAAM,EAAE,qBAAqB,EAAE,GAAG,OAAO,CAAC;AAe1C,SAAS,UAAU,CACjB,cAAqC,EACrC,aAA4B,EAC5B,SAAS,GAAG,KAAK;IAEjB,MAAM,EACJ,MAAM,EAAE,kBAAkB,EAC1B,WAAW,EACX,MAAM,EACN,cAAc,EACd,YAAY,EACZ,cAAc,EACd,6BAA6B,GAC9B,GAAG,aAAa,CAAC;IAClB,MAAM,EAAE,SAAS,EAAE,UAAU,EAAE,GAAG,kBAAkB,CAAC;IACrD,MAAM,UAAU,GAAG,kBAAkB,CAAC,aAAa,EAAE,CAAC;IACtD,MAAM,EAAE,QAAQ,EAAE,GAAG,cAAc,CAAC;IAGpC,MAAM,MAAM,GAAG,IAAI,CAAC,UAAU,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;IACxC,MAAM,CAAC,OAAO,CAAC,CAAC,KAAK,EAAE,EAAE;QACvB,IAAI,CAAC,GAAG,CAAC,MAAM,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;IAClC,CAAC,CAAC,CAAC;IACH,IAAI,CAAC,KAAK,CAAC,MAAM,EAAE,MAAM,EAAE,CAAC,GAAG,MAAM,CAAC,MAAM,CAAC,CAAC;IAE9C,MAAM,iBAAiB,GAAG,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,QAAQ,CAAC,aAAa,CAAC,CAAC,CAAC,CAAC,CAAC;IAIvE,MAAM,CAAC,aAAa,EAAE,iBAAiB,CAAC,GACtC,uBAAuB,CAAC,iBAAiB,CAAC,CAAC;IAG7C,MAAM,YAAY,GAAG,QAAQ,CAAC,aAAa,CAAC,aAAa,CAAC,CAAC;IAC3D,MAAM,gBAAgB,GAAG,QAAQ,CAAC,aAAa,CAAC,iBAAiB,CAAC,CAAC;IAEnE,MAAM,mBAAmB,GAAG;QACZ,qBAAqB,CAAC,SAAS,EAAE,YAAY,CAAC;QAC9C,qBAAqB,CAAC,SAAS,EAAE,gBAAgB,CAAC;KACjE,CAAC;IAEF,MAAM,SAAS,GAAG,yBAAyB,CAAC,mBAAmB,EAAE,UAAU,CAAC,CAAC;IAG7E,MAAM,UAAU,GAAG;QACjB,MAAM,EAAE,MAAsB;QAC9B,OAAO,EAAE,IAAI,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC,CAAC,GAAG,gBAAgB,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC;QAC5D,OAAO,EAAE,IAAI,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC,CAAC,GAAG,gBAAgB,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC;QAC5D,OAAO,EAAE,IAAI,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC,CAAC,GAAG,gBAAgB,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC;KAC7D,CAAC;IAEF,MAAM,mBAAmB,GAAG,IAAI,GAAG,EAAiB,CAAC;IAErD,IAAI,QAAQ,CAAC;IAEb,IAAI,SAAS,EAAE;QACb,QAAQ,GAAG,CAAC,EAAE,KAAK,EAAE,KAAK,EAAE,QAAQ,EAAE,EAAE,EAAE;YACxC,IAAI,cAAc,CAAC,QAAQ,CAAC,KAAK,CAAC,EAAE;gBAClC,OAAO;aACR;YAED,IACE,iBAAiB,CAAC,KAAK,EAAE,WAAW,EAAE,6BAA6B,CAAC,EACpE;gBACA,UAAU,CAAC,KAAK,CAAC,GAAG,YAAY,CAAC;gBAEjC,mBAAmB,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAC;aACtC;QACH,CAAC,CAAC;KACH;SAAM;QACL,QAAQ,GAAG,CAAC,EAAE,KAAK,EAAE,KAAK,EAAE,QAAQ,EAAE,EAAE,EAAE;YACxC,IAAI,cAAc,CAAC,QAAQ,CAAC,KAAK,CAAC,EAAE;gBAClC,OAAO;aACR;YACD,UAAU,CAAC,KAAK,CAAC,GAAG,YAAY,CAAC;YAEjC,mBAAmB,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAC;QACvC,CAAC,CAAC;KACH;IAED,oBAAoB,CAClB,SAAS,EACT,CAAC,QAAQ,EAAE,QAAQ,EAAE,EAAE,CAAC,cAAc,CAAC,UAAU,EAAE,QAAQ,CAAC,EAC5D,QAAQ,EACR,SAAS,CACV,CAAC;IAEF,MAAM,aAAa,GAAa,KAAK,CAAC,IAAI,CAAC,mBAAmB,CAAC,CAAC;IAEhE,+BAA+B,CAAC,cAAc,EAAE,aAAa,CAAC,CAAC;AACjE,CAAC;AAQD,MAAM,UAAU,gBAAgB,CAC9B,cAAqC,EACrC,aAA4B;IAE5B,UAAU,CAAC,cAAc,EAAE,aAAa,EAAE,KAAK,CAAC,CAAC;AACnD,CAAC;AAQD,MAAM,UAAU,qBAAqB,CACnC,cAAqC,EACrC,aAA4B;IAE5B,MAAM,EAAE,MAAM,EAAE,WAAW,EAAE,GAAG,aAAa,CAAC;IAE9C,IACE,CAAC,OAAO,CAAC,OAAO,CAAC,MAAM,CAAC,UAAU,EAAE,WAAW,CAAC,UAAU,CAAC;QAC3D,CAAC,OAAO,CAAC,OAAO,CAAC,MAAM,CAAC,SAAS,EAAE,WAAW,CAAC,SAAS,CAAC,EACzD;QACA,MAAM,IAAI,KAAK,CACb,gGAAgG,CACjG,CAAC;KACH;IAED,UAAU,CAAC,cAAc,EAAE,aAAa,EAAE,IAAI,CAAC,CAAC;AAClD,CAAC;AAQD,MAAM,UAAU,iBAAiB,CAC/B,cAAqC,EACrC,aAA4B;IAE5B,MAAM,IAAI,KAAK,CAAC,qBAAqB,CAAC,CAAC;AACzC,CAAC"}

package/dist/esm/tools/segmentation/strategies/fillSphere.d.ts

@@ -2,13 +2,16 @@ import type { Types } from '@cornerstonejs/core';
 declare type OperationData = {
     points: [Types.Point3, Types.Point3, Types.Point3, Types.Point3];
     volume: Types.IImageVolume;
+    imageVolume: Types.IImageVolume;
     segmentIndex: number;
     segmentationId: string;
     segmentsLocked: number[];
     viewPlaneNormal: Types.Point3;
     viewUp: Types.Point3;
+    strategySpecificConfiguration: any;
     constraintFn: () => boolean;
 };
 export declare function fillInsideSphere(enabledElement: Types.IEnabledElement, operationData: OperationData): void;
+export declare function thresholdInsideSphere(enabledElement: Types.IEnabledElement, operationData: OperationData): void;
 export declare function fillOutsideSphere(enabledElement: Types.IEnabledElement, operationData: OperationData): void;
 export {};

package/dist/esm/tools/segmentation/strategies/fillSphere.js

@@ -1,18 +1,34 @@
+import { utilities as csUtils } from '@cornerstonejs/core';
 import { triggerSegmentationDataModified } from '../../../stateManagement/segmentation/triggerSegmentationEvents';
 import { pointInSurroundingSphereCallback } from '../../../utilities';
-function fillSphere(enabledElement, operationData, _inside = true) {
+import isWithinThreshold from './utils/isWithinThreshold';
+function fillSphere(enabledElement, operationData, _inside = true, threshold = false) {
     const { viewport } = enabledElement;
-    const { volume: segmentation, segmentsLocked, segmentIndex, segmentationId, points, } = operationData;
+    const { volume: segmentation, segmentsLocked, segmentIndex, imageVolume, strategySpecificConfiguration, segmentationId, points, } = operationData;
     const { imageData, dimensions } = segmentation;
     const scalarData = segmentation.getScalarData();
     const scalarIndex = [];
-    const callback = ({ index, value }) => {
-        if (segmentsLocked.includes(value)) {
-            return;
-        }
-        scalarData[index] = segmentIndex;
-        scalarIndex.push(index);
-    };
+    let callback;
+    if (threshold) {
+        callback = ({ value, index, pointIJK }) => {
+            if (segmentsLocked.includes(value)) {
+                return;
+            }
+            if (isWithinThreshold(index, imageVolume, strategySpecificConfiguration)) {
+                scalarData[index] = segmentIndex;
+                scalarIndex.push(index);
+            }
+        };
+    }
+    else {
+        callback = ({ index, value }) => {
+            if (segmentsLocked.includes(value)) {
+                return;
+            }
+            scalarData[index] = segmentIndex;
+            scalarIndex.push(index);
+        };
+    }
     pointInSurroundingSphereCallback(imageData, [points[0], points[1]], callback, viewport);
     const zMultiple = dimensions[0] * dimensions[1];
     const minSlice = Math.floor(scalarIndex[0] / zMultiple);
@@ -23,6 +39,14 @@ function fillSphere(enabledElement, operationData, _inside = true) {
 export function fillInsideSphere(enabledElement, operationData) {
     fillSphere(enabledElement, operationData, true);
 }
+export function thresholdInsideSphere(enabledElement, operationData) {
+    const { volume, imageVolume } = operationData;
+    if (!csUtils.isEqual(volume.dimensions, imageVolume.dimensions) ||
+        !csUtils.isEqual(volume.direction, imageVolume.direction)) {
+        throw new Error('Only source data the same dimensions/size/orientation as the segmentation currently supported.');
+    }
+    fillSphere(enabledElement, operationData, true, true);
+}
 export function fillOutsideSphere(enabledElement, operationData) {
     fillSphere(enabledElement, operationData, false);
 }

package/dist/esm/tools/segmentation/strategies/fillSphere.js.map

@@ -1 +1 @@
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package/dist/esm/tools/segmentation/strategies/utils/isWithinThreshold.d.ts

@@ -0,0 +1,3 @@
+import { Types } from '@cornerstonejs/core';
+declare function isWithinThreshold(index: number, imageVolume: Types.IImageVolume, strategySpecificConfiguration: any): boolean;
+export default isWithinThreshold;

package/dist/esm/tools/segmentation/strategies/utils/isWithinThreshold.js

@@ -0,0 +1,8 @@
+function isWithinThreshold(index, imageVolume, strategySpecificConfiguration) {
+    const { THRESHOLD_INSIDE_CIRCLE } = strategySpecificConfiguration;
+    const voxelValue = imageVolume.getScalarData()[index];
+    const { threshold } = THRESHOLD_INSIDE_CIRCLE;
+    return threshold[0] <= voxelValue && voxelValue <= threshold[1];
+}
+export default isWithinThreshold;
+//# sourceMappingURL=isWithinThreshold.js.map

package/dist/esm/tools/segmentation/strategies/utils/isWithinThreshold.js.map

@@ -0,0 +1 @@
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