@cornerstonejs/tools 0.39.1 → 0.40.1

package/dist/esm/tools/displayTools/Contour/addContourToElement.js

@@ -0,0 +1,41 @@
+import { getEnabledElement, Enums } from '@cornerstonejs/core';
+import vtkPolyData from '@kitware/vtk.js/Common/DataModel/PolyData';
+import vtkCellArray from '@kitware/vtk.js/Common/Core/CellArray';
+import vtkPoints from '@kitware/vtk.js/Common/Core/Points';
+import vtkMapper from '@kitware/vtk.js/Rendering/Core/Mapper';
+import vtkActor from '@kitware/vtk.js/Rendering/Core/Actor';
+function addContourToElement(element, contour, actorUID) {
+    const enabledElement = getEnabledElement(element);
+    const { renderingEngine, viewport } = enabledElement;
+    const { id: viewportId } = viewport;
+    const visibility = true;
+    const immediateRender = false;
+    const suppressEvents = true;
+    const pointList = contour.getPoints();
+    const flatPoints = contour.getFlatPointsArray();
+    const color = contour.getColor();
+    const type = contour.getType();
+    const p = pointList.map((_, i) => i);
+    if (type === Enums.ContourType.CLOSED_PLANAR) {
+        p.push(0);
+    }
+    const var1 = Float32Array.from(flatPoints);
+    const var2 = Uint32Array.from([p.length, ...p]);
+    const colorToUse = color.map((c) => c / 255);
+    const points = vtkPoints.newInstance();
+    points.setData(var1, 3);
+    const lines = vtkCellArray.newInstance();
+    lines.setData(var2, 3);
+    const polygon = vtkPolyData.newInstance();
+    polygon.setPoints(points);
+    polygon.setLines(lines);
+    const mapper1 = vtkMapper.newInstance();
+    mapper1.setInputData(polygon);
+    const actor1 = vtkActor.newInstance();
+    actor1.setMapper(mapper1);
+    actor1.getProperty().setLineWidth(4);
+    actor1.getProperty().setColor(colorToUse[0], colorToUse[1], colorToUse[2]);
+    viewport.addActor({ actor: actor1, uid: actorUID });
+}
+export default addContourToElement;
+//# sourceMappingURL=addContourToElement.js.map

package/dist/esm/tools/displayTools/Contour/addContourToElement.js.map

@@ -0,0 +1 @@
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package/dist/esm/tools/displayTools/Contour/contourDisplay.d.ts

@@ -0,0 +1,11 @@
+import { Types } from '@cornerstonejs/core';
+import { RepresentationPublicInput, SegmentationRepresentationConfig, ToolGroupSpecificRepresentation } from '../../../types/SegmentationStateTypes';
+declare function addSegmentationRepresentation(toolGroupId: string, representationInput: RepresentationPublicInput, toolGroupSpecificConfig?: SegmentationRepresentationConfig): Promise<string>;
+declare function removeSegmentationRepresentation(toolGroupId: string, segmentationRepresentationUID: string, renderImmediate?: boolean): void;
+declare function render(viewport: Types.IVolumeViewport, representation: ToolGroupSpecificRepresentation, toolGroupConfig: SegmentationRepresentationConfig): Promise<void>;
+declare const _default: {
+    render: typeof render;
+    addSegmentationRepresentation: typeof addSegmentationRepresentation;
+    removeSegmentationRepresentation: typeof removeSegmentationRepresentation;
+};
+export default _default;

package/dist/esm/tools/displayTools/Contour/contourDisplay.js

@@ -0,0 +1,114 @@
+import { cache, getEnabledElementByIds, utilities, Enums, } from '@cornerstonejs/core';
+import * as SegmentationState from '../../../stateManagement/segmentation/segmentationState';
+import * as SegmentationConfig from '../../../stateManagement/segmentation/config/segmentationConfig';
+import Representations from '../../../enums/SegmentationRepresentations';
+import { getToolGroup } from '../../../store/ToolGroupManager';
+import { deepMerge } from '../../../utilities';
+import removeContourFromElement from './removeContourFromElement';
+import addContourToElement from './addContourToElement';
+async function addSegmentationRepresentation(toolGroupId, representationInput, toolGroupSpecificConfig) {
+    const { segmentationId } = representationInput;
+    const segmentationRepresentationUID = utilities.uuidv4();
+    const segmentsHidden = new Set();
+    const visibility = true;
+    const colorLUTIndex = 0;
+    const active = true;
+    const toolGroupSpecificRepresentation = {
+        segmentationId,
+        segmentationRepresentationUID,
+        type: Representations.Contour,
+        segmentsHidden,
+        visibility,
+        colorLUTIndex,
+        active,
+        segmentationRepresentationSpecificConfig: {},
+        segmentSpecificConfig: {},
+        config: {},
+    };
+    if (toolGroupSpecificConfig) {
+        const currentToolGroupConfig = SegmentationConfig.getToolGroupSpecificConfig(toolGroupId);
+        const mergedConfig = deepMerge(currentToolGroupConfig, toolGroupSpecificConfig);
+        SegmentationConfig.setToolGroupSpecificConfig(toolGroupId, {
+            renderInactiveSegmentations: mergedConfig.renderInactiveSegmentations || true,
+            representations: {
+                ...mergedConfig.representations,
+            },
+        });
+    }
+    SegmentationState.addSegmentationRepresentation(toolGroupId, toolGroupSpecificRepresentation);
+    return segmentationRepresentationUID;
+}
+function removeSegmentationRepresentation(toolGroupId, segmentationRepresentationUID, renderImmediate = false) {
+    _removeContourFromToolGroupViewports(toolGroupId, segmentationRepresentationUID);
+    SegmentationState.removeSegmentationRepresentation(toolGroupId, segmentationRepresentationUID);
+    if (renderImmediate) {
+        const viewportsInfo = getToolGroup(toolGroupId).getViewportsInfo();
+        viewportsInfo.forEach(({ viewportId, renderingEngineId }) => {
+            const enabledElement = getEnabledElementByIds(viewportId, renderingEngineId);
+            enabledElement.viewport.render();
+        });
+    }
+}
+async function render(viewport, representation, toolGroupConfig) {
+    const { colorLUTIndex, active, segmentationId, segmentationRepresentationUID, visibility, segmentsHidden, } = representation;
+    const segmentation = SegmentationState.getSegmentation(segmentationId);
+    const contourData = segmentation.representationData[Representations.Contour];
+    const { geometryIds } = contourData;
+    if (!geometryIds?.length) {
+        console.warn(`No contours found for segmentationId ${segmentationId}. Skipping render.`);
+    }
+    _renderContourSets(viewport, geometryIds, segmentationRepresentationUID);
+}
+function _renderContourSets(viewport, geometryIds, segmentationRepresentationUID) {
+    geometryIds.forEach((geometryId) => {
+        const geometry = cache.getGeometry(geometryId);
+        if (!geometry) {
+            throw new Error(`No contours found for geometryId ${geometryId}`);
+        }
+        if (geometry.type !== Enums.GeometryType.CONTOUR) {
+            throw new Error(`Geometry type ${geometry.type} not supported for rendering.`);
+        }
+        if (!geometry.data) {
+            console.warn(`No contours found for geometryId ${geometryId}. Skipping render.`);
+            return;
+        }
+        const contourSet = geometry.data;
+        _renderContourSet(viewport, contourSet, segmentationRepresentationUID);
+    });
+}
+function _renderContourSet(viewport, contourSet, segmentationRepresentationUID) {
+    contourSet.getContours().forEach((contour, index) => {
+        const contourUID = `${segmentationRepresentationUID}_${contourSet.id}_${index}}`;
+        _renderContour(viewport, contour, contourUID);
+    });
+    viewport.resetCamera();
+    viewport.render();
+}
+function _renderContour(viewport, contour, contourUID) {
+    const actorUID = contourUID;
+    const actorEntry = viewport.getActor(actorUID);
+    if (!actorEntry) {
+        addContourToElement(viewport.element, contour, actorUID);
+    }
+    else {
+        throw new Error('Not implemented yet. (Update contour)');
+    }
+}
+function _removeContourFromToolGroupViewports(toolGroupId, segmentationRepresentationUID) {
+    const toolGroup = getToolGroup(toolGroupId);
+    if (toolGroup === undefined) {
+        throw new Error(`ToolGroup with ToolGroupId ${toolGroupId} does not exist`);
+    }
+    const { viewportsInfo } = toolGroup;
+    for (const viewportInfo of viewportsInfo) {
+        const { viewportId, renderingEngineId } = viewportInfo;
+        const enabledElement = getEnabledElementByIds(viewportId, renderingEngineId);
+        removeContourFromElement(enabledElement.viewport.element, segmentationRepresentationUID);
+    }
+}
+export default {
+    render,
+    addSegmentationRepresentation,
+    removeSegmentationRepresentation,
+};
+//# sourceMappingURL=contourDisplay.js.map

package/dist/esm/tools/displayTools/Contour/contourDisplay.js.map

@@ -0,0 +1 @@
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package/dist/esm/tools/displayTools/Contour/index.d.ts

@@ -0,0 +1,2 @@
+import contourDisplay from './contourDisplay';
+export { contourDisplay };

package/dist/esm/tools/displayTools/Contour/index.js

@@ -0,0 +1,3 @@
+import contourDisplay from './contourDisplay';
+export { contourDisplay };
+//# sourceMappingURL=index.js.map

package/dist/esm/tools/displayTools/Contour/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../../src/tools/displayTools/Contour/index.ts"],"names":[],"mappings":"AAAA,OAAO,cAAc,MAAM,kBAAkB,CAAC;AAE9C,OAAO,EAAE,cAAc,EAAE,CAAC"}

package/dist/esm/tools/displayTools/Contour/removeContourFromElement.d.ts

@@ -0,0 +1,2 @@
+declare function removeContourFromElement(element: HTMLDivElement, segmentationRepresentationUID: string, removeFromCache?: boolean): void;
+export default removeContourFromElement;

package/dist/esm/tools/displayTools/Contour/removeContourFromElement.js

@@ -0,0 +1,12 @@
+import { getEnabledElement } from '@cornerstonejs/core';
+function removeContourFromElement(element, segmentationRepresentationUID, removeFromCache = false) {
+    const enabledElement = getEnabledElement(element);
+    const { viewport } = enabledElement;
+    const actorEntries = viewport.getActors();
+    const actorUIDsToRemove = actorEntries
+        .map(({ uid }) => uid.startsWith(segmentationRepresentationUID) ? uid : undefined)
+        .filter(Boolean);
+    viewport.removeActors(actorUIDsToRemove);
+}
+export default removeContourFromElement;
+//# sourceMappingURL=removeContourFromElement.js.map

package/dist/esm/tools/displayTools/Contour/removeContourFromElement.js.map

@@ -0,0 +1 @@
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package/dist/esm/tools/displayTools/Labelmap/validateRepresentationData.js

@@ -3,7 +3,8 @@ function validate(segmentationInput) {
     if (!segmentationInput.representation.data) {
         throw new Error('The segmentationInput.representationData.data is undefined, please provide a valid representationData.data');
     }
-    const representationData = segmentationInput.representation.data;
+    const representationData = segmentationInput.representation
+        .data;
     if (!representationData.volumeId) {
         throw new Error('The segmentationInput.representationData.volumeId is undefined, please provide a valid representationData.volumeId');
     }

package/dist/esm/tools/displayTools/Labelmap/validateRepresentationData.js.map

@@ -1 +1 @@
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+{"version":3,"file":"validateRepresentationData.js","sourceRoot":"","sources":["../../../../../src/tools/displayTools/Labelmap/validateRepresentationData.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,KAAK,EAAE,MAAM,qBAAqB,CAAC;AAG5C,SAAS,QAAQ,CAAC,iBAA0C;IAC1D,IAAI,CAAC,iBAAiB,CAAC,cAAc,CAAC,IAAI,EAAE;QAC1C,MAAM,IAAI,KAAK,CACb,4GAA4G,CAC7G,CAAC;KACH;IAED,MAAM,kBAAkB,GAAG,iBAAiB,CAAC,cAAc;SACxD,IAAgC,CAAC;IAEpC,IAAI,CAAC,kBAAkB,CAAC,QAAQ,EAAE;QAChC,MAAM,IAAI,KAAK,CACb,oHAAoH,CACrH,CAAC;KACH;IAED,MAAM,YAAY,GAAG,KAAK,CAAC,SAAS,CAAC,kBAAkB,CAAC,QAAQ,CAAC,CAAC;IAElE,IAAI,CAAC,YAAY,EAAE;QACjB,MAAM,IAAI,KAAK,CACb,eAAe,kBAAkB,CAAC,QAAQ,kFAAkF,CAC7H,CAAC;KACH;AACH,CAAC;AAED,eAAe,QAAQ,CAAC"}

package/dist/esm/tools/displayTools/SegmentationDisplayTool.js

@@ -3,6 +3,7 @@ import { getEnabledElementByIds } from '@cornerstonejs/core';
 import Representations from '../../enums/SegmentationRepresentations';
 import { getSegmentationRepresentations } from '../../stateManagement/segmentation/segmentationState';
 import { labelmapDisplay } from './Labelmap';
+import { contourDisplay } from './Contour';
 import { config as segmentationConfig } from '../../stateManagement/segmentation';
 import { triggerSegmentationRepresentationModified } from '../../stateManagement/segmentation/triggerSegmentationEvents';
 import { getToolGroup } from '../../store/ToolGroupManager';
@@ -35,6 +36,9 @@ class SegmentationDisplayTool extends BaseTool {
                     if (representation.type == Representations.Labelmap) {
                         viewportsRenderList.push(labelmapDisplay.render(viewport, representation, config));
                     }
+                    else if (representation.type == Representations.Contour) {
+                        viewportsRenderList.push(contourDisplay.render(viewport, representation, config));
+                    }
                 }
                 return viewportsRenderList;
             });

package/dist/esm/tools/displayTools/SegmentationDisplayTool.js.map

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package/dist/esm/tools/segmentation/BrushTool.js.map

@@ -1 +1 @@
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package/dist/esm/tools/segmentation/CircleScissorsTool.js.map

@@ -1 +1 @@
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package/dist/esm/tools/segmentation/PaintFillTool.js.map

@@ -1 +1 @@
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package/dist/esm/tools/segmentation/RectangleScissorsTool.js.map

@@ -1 +1 @@
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package/dist/esm/tools/segmentation/SphereScissorsTool.js.map

@@ -1 +1 @@
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package/dist/esm/types/ContourTypes.d.ts

@@ -0,0 +1,10 @@
+export declare type ContourConfig = {
+    outlineWidthActive?: number;
+    outlineWidthInactive?: number;
+    outlineOpacity?: number;
+    outlineOpacityInactive?: number;
+};
+export declare type ContourRenderingConfig = {};
+export declare type ContourSegmentationData = {
+    geometryIds: string[];
+};

package/dist/esm/types/ContourTypes.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=ContourTypes.js.map

package/dist/esm/types/ContourTypes.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"ContourTypes.js","sourceRoot":"","sources":["../../../src/types/ContourTypes.ts"],"names":[],"mappings":""}

package/dist/esm/types/SegmentationStateTypes.d.ts

@@ -1,4 +1,5 @@
 import * as Enums from '../enums';
+import { ContourConfig, ContourSegmentationData } from './ContourTypes';
 import type { LabelmapConfig, LabelmapSegmentationData, LabelmapRenderingConfig } from './LabelmapTypes';
 export declare type Color = [number, number, number, number];
 export declare type ColorLUT = Array<Color>;
@@ -7,6 +8,7 @@ export declare type SegmentSpecificRepresentationConfig = {
 };
 export declare type RepresentationConfig = {
     LABELMAP?: LabelmapConfig;
+    CONTOUR?: ContourConfig;
 };
 export declare type SegmentationRepresentationConfig = {
     renderInactiveSegmentations: boolean;
@@ -14,6 +16,7 @@ export declare type SegmentationRepresentationConfig = {
 };
 export declare type SegmentationRepresentationData = {
     LABELMAP?: LabelmapSegmentationData;
+    CONTOUR?: ContourSegmentationData;
 };
 export declare type Segmentation = {
     segmentationId: string;
@@ -40,6 +43,11 @@ export declare type ToolGroupSpecificLabelmapRepresentation = ToolGroupSpecificR
     segmentationRepresentationSpecificConfig?: RepresentationConfig;
     segmentSpecificConfig?: SegmentSpecificRepresentationConfig;
 };
+export declare type ToolGroupSpecificContourRepresentation = ToolGroupSpecificRepresentationState & {
+    config: LabelmapRenderingConfig;
+    segmentationRepresentationSpecificConfig?: RepresentationConfig;
+    segmentSpecificConfig?: SegmentSpecificRepresentationConfig;
+};
 export declare type ToolGroupSpecificRepresentation = ToolGroupSpecificLabelmapRepresentation;
 export declare type ToolGroupSpecificRepresentations = Array<ToolGroupSpecificRepresentation>;
 export declare type SegmentationState = {
@@ -57,7 +65,7 @@ export declare type SegmentationPublicInput = {
     segmentationId: string;
     representation: {
         type: Enums.SegmentationRepresentations;
-        data: LabelmapSegmentationData;
+        data: LabelmapSegmentationData | ContourSegmentationData;
     };
 };
 export declare type RepresentationPublicInput = {

package/dist/esm/types/index.d.ts

@@ -23,4 +23,5 @@ import type { Color, ColorLUT, RepresentationConfig, SegmentationRepresentationC
 import ISynchronizerEventHandler from './ISynchronizerEventHandler';
 import { FloodFillGetter, FloodFillOptions, FloodFillResult } from './FloodFillTypes';
 import IToolClassReference from './IToolClassReference';
-export type { Annotation, Annotations, FrameOfReferenceSpecificAnnotations, AnnotationState, AnnotationStyle, ToolSpecificAnnotationTypes, JumpToSliceOptions, PlanarBoundingBox, ToolProps, PublicToolProps, EventTypes, IPoints, ITouchPoints, IDistance, IToolBinding, SetToolBindingsType, ToolOptionsType, InteractionTypes, IToolGroup, IToolClassReference, ISynchronizerEventHandler, ToolHandle, AnnotationHandle, TextBoxHandle, Segmentation, SegmentationState, SegmentationRepresentationData, SegmentationRepresentationConfig, RepresentationConfig, ToolGroupSpecificRepresentationState, ToolGroupSpecificLabelmapRepresentation, ToolGroupSpecificRepresentation, RepresentationPublicInput, Color, ColorLUT, LabelmapTypes, SVGCursorDescriptor, SVGPoint, ScrollOptions, CINETypes, BoundsIJK, SVGDrawingHelper, FloodFillResult, FloodFillGetter, FloodFillOptions, };
+import { ContourSegmentationData } from './ContourTypes';
+export type { Annotation, Annotations, FrameOfReferenceSpecificAnnotations, AnnotationState, AnnotationStyle, ToolSpecificAnnotationTypes, JumpToSliceOptions, PlanarBoundingBox, ToolProps, PublicToolProps, EventTypes, IPoints, ITouchPoints, IDistance, IToolBinding, SetToolBindingsType, ToolOptionsType, InteractionTypes, IToolGroup, IToolClassReference, ISynchronizerEventHandler, ToolHandle, AnnotationHandle, TextBoxHandle, Segmentation, SegmentationState, SegmentationRepresentationData, SegmentationRepresentationConfig, RepresentationConfig, ToolGroupSpecificRepresentationState, ToolGroupSpecificLabelmapRepresentation, ToolGroupSpecificRepresentation, RepresentationPublicInput, Color, ColorLUT, LabelmapTypes, SVGCursorDescriptor, SVGPoint, ScrollOptions, CINETypes, BoundsIJK, SVGDrawingHelper, FloodFillResult, FloodFillGetter, FloodFillOptions, ContourSegmentationData, };