@cornerstonejs/tools 0.30.7 → 0.32.0

package/dist/esm/tools/segmentation/strategies/eraseCircle.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"eraseCircle.js","sourceRoot":"","sources":["../../../../../src/tools/segmentation/strategies/eraseCircle.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,gBAAgB,EAAE,MAAM,cAAc,CAAC;AAehD,MAAM,UAAU,iBAAiB,CAC/B,cAAqC,EACrC,aAA4B;IAI5B,MAAM,kBAAkB,GAAG;QACzB,GAAG,aAAa;QAChB,YAAY,EAAE,CAAC;KAChB,CAAC;IAEF,gBAAgB,CAAC,cAAc,EAAE,kBAAkB,CAAC,CAAC;AACvD,CAAC"}

package/dist/esm/tools/segmentation/strategies/eraseSphere.d.ts

@@ -0,0 +1,13 @@
+import type { Types } from '@cornerstonejs/core';
+declare type OperationData = {
+    points: [Types.Point3, Types.Point3, Types.Point3, Types.Point3];
+    volume: Types.IImageVolume;
+    segmentIndex: number;
+    segmentationId: string;
+    segmentsLocked: number[];
+    viewPlaneNormal: Types.Point3;
+    viewUp: Types.Point3;
+    constraintFn: () => boolean;
+};
+export declare function eraseInsideSphere(enabledElement: Types.IEnabledElement, operationData: OperationData): void;
+export {};

package/dist/esm/tools/segmentation/strategies/eraseSphere.js

@@ -0,0 +1,8 @@
+import { fillInsideSphere } from './fillSphere';
+export function eraseInsideSphere(enabledElement, operationData) {
+    const eraseOperationData = Object.assign({}, operationData, {
+        segmentIndex: 0,
+    });
+    fillInsideSphere(enabledElement, eraseOperationData);
+}
+//# sourceMappingURL=eraseSphere.js.map

package/dist/esm/tools/segmentation/strategies/eraseSphere.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"eraseSphere.js","sourceRoot":"","sources":["../../../../../src/tools/segmentation/strategies/eraseSphere.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,gBAAgB,EAAE,MAAM,cAAc,CAAC;AAahD,MAAM,UAAU,iBAAiB,CAC/B,cAAqC,EACrC,aAA4B;IAI5B,MAAM,kBAAkB,GAAG,MAAM,CAAC,MAAM,CAAC,EAAE,EAAE,aAAa,EAAE;QAC1D,YAAY,EAAE,CAAC;KAChB,CAAC,CAAC;IAEH,gBAAgB,CAAC,cAAc,EAAE,kBAAkB,CAAC,CAAC;AACvD,CAAC"}

package/dist/esm/tools/segmentation/strategies/fillCircle.d.ts

@@ -1,14 +1,17 @@
 import type { Types } from '@cornerstonejs/core';
 declare type OperationData = {
     segmentationId: string;
+    imageVolume: Types.IImageVolume;
     points: any;
     volume: Types.IImageVolume;
     segmentIndex: number;
     segmentsLocked: number[];
     viewPlaneNormal: number[];
     viewUp: number[];
+    strategySpecificConfiguration: any;
     constraintFn: () => boolean;
 };
 export declare function fillInsideCircle(enabledElement: Types.IEnabledElement, operationData: OperationData): void;
+export declare function thresholdInsideCircle(enabledElement: Types.IEnabledElement, operationData: OperationData): void;
 export declare function fillOutsideCircle(enabledElement: Types.IEnabledElement, operationData: OperationData): void;
 export {};

package/dist/esm/tools/segmentation/strategies/fillCircle.js

@@ -5,8 +5,8 @@ import { getBoundingBoxAroundShape } from '../../../utilities/boundingBox';
 import { triggerSegmentationDataModified } from '../../../stateManagement/segmentation/triggerSegmentationEvents';
 import { pointInShapeCallback } from '../../../utilities';
 const { transformWorldToIndex } = csUtils;
-function fillCircle(enabledElement, operationData, inside = true) {
-    const { volume: segmentationVolume, points, segmentsLocked, segmentIndex, segmentationId, } = operationData;
+function fillCircle(enabledElement, operationData, threshold = false) {
+    const { volume: segmentationVolume, imageVolume, points, segmentsLocked, segmentIndex, segmentationId, strategySpecificConfiguration, } = operationData;
     const { imageData, dimensions, scalarData } = segmentationVolume;
     const { viewport } = enabledElement;
     const center = vec3.fromValues(0, 0, 0);
@@ -33,21 +33,49 @@ function fillCircle(enabledElement, operationData, inside = true) {
         zRadius: Math.abs(topLeftWorld[2] - bottomRightWorld[2]) / 2,
     };
     const modifiedSlicesToUse = new Set();
-    const callback = ({ value, index, pointIJK }) => {
-        if (segmentsLocked.includes(value)) {
-            return;
-        }
-        scalarData[index] = segmentIndex;
-        modifiedSlicesToUse.add(pointIJK[2]);
-    };
+    let callback;
+    if (threshold) {
+        callback = ({ value, index, pointIJK }) => {
+            if (segmentsLocked.includes(value)) {
+                return;
+            }
+            if (isWithinThreshold(index, imageVolume, strategySpecificConfiguration)) {
+                scalarData[index] = segmentIndex;
+                modifiedSlicesToUse.add(pointIJK[2]);
+            }
+        };
+    }
+    else {
+        callback = ({ value, index, pointIJK }) => {
+            if (segmentsLocked.includes(value)) {
+                return;
+            }
+            scalarData[index] = segmentIndex;
+            modifiedSlicesToUse.add(pointIJK[2]);
+        };
+    }
     pointInShapeCallback(imageData, (pointLPS, pointIJK) => pointInEllipse(ellipseObj, pointLPS), callback, boundsIJK);
     const arrayOfSlices = Array.from(modifiedSlicesToUse);
     triggerSegmentationDataModified(segmentationId, arrayOfSlices);
 }
+function isWithinThreshold(index, imageVolume, strategySpecificConfiguration) {
+    const { THRESHOLD_INSIDE_CIRCLE } = strategySpecificConfiguration;
+    const voxelValue = imageVolume.scalarData[index];
+    const { threshold } = THRESHOLD_INSIDE_CIRCLE;
+    return threshold[0] <= voxelValue && voxelValue <= threshold[1];
+}
 export function fillInsideCircle(enabledElement, operationData) {
+    fillCircle(enabledElement, operationData, false);
+}
+export function thresholdInsideCircle(enabledElement, operationData) {
+    const { volume, imageVolume } = operationData;
+    if (!csUtils.isEqual(volume.dimensions, imageVolume.dimensions) ||
+        !csUtils.isEqual(volume.direction, imageVolume.direction)) {
+        throw new Error('Only source data the same dimensions/size/orientation as the segmentation currently supported.');
+    }
     fillCircle(enabledElement, operationData, true);
 }
 export function fillOutsideCircle(enabledElement, operationData) {
-    fillCircle(enabledElement, operationData, false);
+    throw new Error('Not yet implemented');
 }
 //# sourceMappingURL=fillCircle.js.map

package/dist/esm/tools/segmentation/strategies/fillCircle.js.map

@@ -1 +1 @@
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+{"version":3,"file":"fillCircle.js","sourceRoot":"","sources":["../../../../../src/tools/segmentation/strategies/fillCircle.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AAEjC,OAAO,EAAE,SAAS,IAAI,OAAO,EAAE,MAAM,qBAAqB,CAAC;AAE3D,OAAO,EACL,uBAAuB,EACvB,cAAc,GACf,MAAM,iCAAiC,CAAC;AACzC,OAAO,EAAE,yBAAyB,EAAE,MAAM,gCAAgC,CAAC;AAC3E,OAAO,EAAE,+BAA+B,EAAE,MAAM,iEAAiE,CAAC;AAClH,OAAO,EAAE,oBAAoB,EAAE,MAAM,oBAAoB,CAAC;AAE1D,MAAM,EAAE,qBAAqB,EAAE,GAAG,OAAO,CAAC;AAe1C,SAAS,UAAU,CACjB,cAAqC,EACrC,aAA4B,EAC5B,SAAS,GAAG,KAAK;IAEjB,MAAM,EACJ,MAAM,EAAE,kBAAkB,EAC1B,WAAW,EACX,MAAM,EACN,cAAc,EACd,YAAY,EACZ,cAAc,EACd,6BAA6B,GAC9B,GAAG,aAAa,CAAC;IAClB,MAAM,EAAE,SAAS,EAAE,UAAU,EAAE,UAAU,EAAE,GAAG,kBAAkB,CAAC;IACjE,MAAM,EAAE,QAAQ,EAAE,GAAG,cAAc,CAAC;IAGpC,MAAM,MAAM,GAAG,IAAI,CAAC,UAAU,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC;IACxC,MAAM,CAAC,OAAO,CAAC,CAAC,KAAK,EAAE,EAAE;QACvB,IAAI,CAAC,GAAG,CAAC,MAAM,EAAE,MAAM,EAAE,KAAK,CAAC,CAAC;IAClC,CAAC,CAAC,CAAC;IACH,IAAI,CAAC,KAAK,CAAC,MAAM,EAAE,MAAM,EAAE,CAAC,GAAG,MAAM,CAAC,MAAM,CAAC,CAAC;IAE9C,MAAM,iBAAiB,GAAG,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,QAAQ,CAAC,aAAa,CAAC,CAAC,CAAC,CAAC,CAAC;IAIvE,MAAM,CAAC,aAAa,EAAE,iBAAiB,CAAC,GACtC,uBAAuB,CAAC,iBAAiB,CAAC,CAAC;IAG7C,MAAM,YAAY,GAAG,QAAQ,CAAC,aAAa,CAAC,aAAa,CAAC,CAAC;IAC3D,MAAM,gBAAgB,GAAG,QAAQ,CAAC,aAAa,CAAC,iBAAiB,CAAC,CAAC;IAEnE,MAAM,mBAAmB,GAAG;QACZ,qBAAqB,CAAC,SAAS,EAAE,YAAY,CAAC;QAC9C,qBAAqB,CAAC,SAAS,EAAE,gBAAgB,CAAC;KACjE,CAAC;IAEF,MAAM,SAAS,GAAG,yBAAyB,CAAC,mBAAmB,EAAE,UAAU,CAAC,CAAC;IAE7E,IAAI,SAAS,CAAC,KAAK,CAAC,CAAC,CAAC,GAAG,EAAE,GAAG,CAAC,EAAE,EAAE,CAAC,GAAG,KAAK,GAAG,CAAC,EAAE;QAChD,MAAM,IAAI,KAAK,CAAC,kDAAkD,CAAC,CAAC;KACrE;IAGD,MAAM,UAAU,GAAG;QACjB,MAAM,EAAE,MAAsB;QAC9B,OAAO,EAAE,IAAI,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC,CAAC,GAAG,gBAAgB,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC;QAC5D,OAAO,EAAE,IAAI,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC,CAAC,GAAG,gBAAgB,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC;QAC5D,OAAO,EAAE,IAAI,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC,CAAC,GAAG,gBAAgB,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC;KAC7D,CAAC;IAEF,MAAM,mBAAmB,GAAG,IAAI,GAAG,EAAiB,CAAC;IAErD,IAAI,QAAQ,CAAC;IAEb,IAAI,SAAS,EAAE;QACb,QAAQ,GAAG,CAAC,EAAE,KAAK,EAAE,KAAK,EAAE,QAAQ,EAAE,EAAE,EAAE;YACxC,IAAI,cAAc,CAAC,QAAQ,CAAC,KAAK,CAAC,EAAE;gBAClC,OAAO;aACR;YAED,IACE,iBAAiB,CAAC,KAAK,EAAE,WAAW,EAAE,6BAA6B,CAAC,EACpE;gBACA,UAAU,CAAC,KAAK,CAAC,GAAG,YAAY,CAAC;gBAEjC,mBAAmB,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAC;aACtC;QACH,CAAC,CAAC;KACH;SAAM;QACL,QAAQ,GAAG,CAAC,EAAE,KAAK,EAAE,KAAK,EAAE,QAAQ,EAAE,EAAE,EAAE;YACxC,IAAI,cAAc,CAAC,QAAQ,CAAC,KAAK,CAAC,EAAE;gBAClC,OAAO;aACR;YACD,UAAU,CAAC,KAAK,CAAC,GAAG,YAAY,CAAC;YAEjC,mBAAmB,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAC;QACvC,CAAC,CAAC;KACH;IAED,oBAAoB,CAClB,SAAS,EACT,CAAC,QAAQ,EAAE,QAAQ,EAAE,EAAE,CAAC,cAAc,CAAC,UAAU,EAAE,QAAQ,CAAC,EAC5D,QAAQ,EACR,SAAS,CACV,CAAC;IAEF,MAAM,aAAa,GAAa,KAAK,CAAC,IAAI,CAAC,mBAAmB,CAAC,CAAC;IAEhE,+BAA+B,CAAC,cAAc,EAAE,aAAa,CAAC,CAAC;AACjE,CAAC;AAED,SAAS,iBAAiB,CACxB,KAAa,EACb,WAA+B,EAC/B,6BAAkC;IAElC,MAAM,EAAE,uBAAuB,EAAE,GAAG,6BAA6B,CAAC;IAElE,MAAM,UAAU,GAAG,WAAW,CAAC,UAAU,CAAC,KAAK,CAAC,CAAC;IACjD,MAAM,EAAE,SAAS,EAAE,GAAG,uBAAuB,CAAC;IAE9C,OAAO,SAAS,CAAC,CAAC,CAAC,IAAI,UAAU,IAAI,UAAU,IAAI,SAAS,CAAC,CAAC,CAAC,CAAC;AAClE,CAAC;AAQD,MAAM,UAAU,gBAAgB,CAC9B,cAAqC,EACrC,aAA4B;IAE5B,UAAU,CAAC,cAAc,EAAE,aAAa,EAAE,KAAK,CAAC,CAAC;AACnD,CAAC;AAQD,MAAM,UAAU,qBAAqB,CACnC,cAAqC,EACrC,aAA4B;IAE5B,MAAM,EAAE,MAAM,EAAE,WAAW,EAAE,GAAG,aAAa,CAAC;IAE9C,IACE,CAAC,OAAO,CAAC,OAAO,CAAC,MAAM,CAAC,UAAU,EAAE,WAAW,CAAC,UAAU,CAAC;QAC3D,CAAC,OAAO,CAAC,OAAO,CAAC,MAAM,CAAC,SAAS,EAAE,WAAW,CAAC,SAAS,CAAC,EACzD;QACA,MAAM,IAAI,KAAK,CACb,gGAAgG,CACjG,CAAC;KACH;IAED,UAAU,CAAC,cAAc,EAAE,aAAa,EAAE,IAAI,CAAC,CAAC;AAClD,CAAC;AAQD,MAAM,UAAU,iBAAiB,CAC/B,cAAqC,EACrC,aAA4B;IAE5B,MAAM,IAAI,KAAK,CAAC,qBAAqB,CAAC,CAAC;AACzC,CAAC"}

package/dist/esm/types/FloodFillTypes.d.ts

@@ -0,0 +1,15 @@
+import { Types } from '@cornerstonejs/core';
+declare type FloodFillResult = {
+    flooded: Types.Point2[] | Types.Point3[];
+    boundaries: Types.Point2[] | Types.Point3[];
+};
+declare type FloodFillGetter3D = (x: number, y: number, z: number) => number;
+declare type FloodFillGetter2D = (x: number, y: number) => number;
+declare type FloodFillGetter = FloodFillGetter2D | FloodFillGetter3D;
+declare type FloodFillOptions = {
+    onFlood?: (x: any, y: any) => void;
+    onBoundary?: (x: any, y: any) => void;
+    equals?: (a: any, b: any) => boolean;
+    diagonals?: boolean;
+};
+export { FloodFillResult, FloodFillGetter, FloodFillOptions };

package/dist/esm/types/FloodFillTypes.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=FloodFillTypes.js.map

package/dist/esm/types/FloodFillTypes.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"FloodFillTypes.js","sourceRoot":"","sources":["../../../src/types/FloodFillTypes.ts"],"names":[],"mappings":""}

package/dist/esm/types/IToolClassReference.d.ts

@@ -0,0 +1,3 @@
+import { BaseTool } from '../tools';
+declare type IToolClassReference = new <T extends BaseTool>(config: any) => T;
+export default IToolClassReference;

package/dist/esm/types/IToolClassReference.js

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=IToolClassReference.js.map

package/dist/esm/types/IToolClassReference.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"IToolClassReference.js","sourceRoot":"","sources":["../../../src/types/IToolClassReference.ts"],"names":[],"mappings":""}

package/dist/esm/types/IToolGroup.d.ts

@@ -13,6 +13,9 @@ export default interface IToolGroup {
     addTool: {
         (toolName: string, toolConfiguration?: any): void;
     };
+    addToolInstance: {
+        (ttoolName: string, parentClassName: string, configuration?: any): void;
+    };
     addViewport: {
         (viewportId: string, renderingEngineId?: string): void;
     };

package/dist/esm/types/index.d.ts

@@ -19,4 +19,6 @@ import type SVGDrawingHelper from './SVGDrawingHelper';
 import type * as CINETypes from './CINETypes';
 import type { Color, ColorLUT, RepresentationConfig, SegmentationRepresentationConfig, SegmentationRepresentationData, Segmentation, ToolGroupSpecificRepresentationState, ToolGroupSpecificLabelmapRepresentation, ToolGroupSpecificRepresentation, SegmentationState, RepresentationPublicInput } from './SegmentationStateTypes';
 import ISynchronizerEventHandler from './ISynchronizerEventHandler';
-export type { Annotation, Annotations, FrameOfReferenceSpecificAnnotations, AnnotationState, AnnotationStyle, ToolSpecificAnnotationTypes, JumpToSliceOptions, PlanarBoundingBox, ToolProps, PublicToolProps, EventTypes, IPoints, IToolBinding, SetToolBindingsType, ToolOptionsType, InteractionTypes, IToolGroup, ISynchronizerEventHandler, ToolHandle, AnnotationHandle, TextBoxHandle, Segmentation, SegmentationState, SegmentationRepresentationData, SegmentationRepresentationConfig, RepresentationConfig, ToolGroupSpecificRepresentationState, ToolGroupSpecificLabelmapRepresentation, ToolGroupSpecificRepresentation, RepresentationPublicInput, Color, ColorLUT, LabelmapTypes, SVGCursorDescriptor, SVGPoint, ScrollOptions, CINETypes, BoundsIJK, SVGDrawingHelper, };
+import { FloodFillGetter, FloodFillOptions, FloodFillResult } from './FloodFillTypes';
+import IToolClassReference from './IToolClassReference';
+export type { Annotation, Annotations, FrameOfReferenceSpecificAnnotations, AnnotationState, AnnotationStyle, ToolSpecificAnnotationTypes, JumpToSliceOptions, PlanarBoundingBox, ToolProps, PublicToolProps, EventTypes, IPoints, IToolBinding, SetToolBindingsType, ToolOptionsType, InteractionTypes, IToolGroup, IToolClassReference, ISynchronizerEventHandler, ToolHandle, AnnotationHandle, TextBoxHandle, Segmentation, SegmentationState, SegmentationRepresentationData, SegmentationRepresentationConfig, RepresentationConfig, ToolGroupSpecificRepresentationState, ToolGroupSpecificLabelmapRepresentation, ToolGroupSpecificRepresentation, RepresentationPublicInput, Color, ColorLUT, LabelmapTypes, SVGCursorDescriptor, SVGPoint, ScrollOptions, CINETypes, BoundsIJK, SVGDrawingHelper, FloodFillResult, FloodFillGetter, FloodFillOptions, };

package/dist/esm/utilities/segmentation/brushSizeForToolGroup.d.ts

@@ -0,0 +1,2 @@
+export declare function setBrushSizeForToolGroup(toolGroupId: string, brushSize: number): void;
+export declare function getBrushSizeForToolGroup(toolGroupId: string): void;

package/dist/esm/utilities/segmentation/brushSizeForToolGroup.js

@@ -0,0 +1,41 @@
+import { getToolGroup } from '../../store/ToolGroupManager';
+import triggerAnnotationRenderForViewportIds from '../triggerAnnotationRenderForViewportIds';
+import { getRenderingEngine } from '@cornerstonejs/core';
+import getBrushToolInstances from './utilities';
+export function setBrushSizeForToolGroup(toolGroupId, brushSize) {
+    const toolGroup = getToolGroup(toolGroupId);
+    if (toolGroup === undefined) {
+        return;
+    }
+    const brushBasedToolInstances = getBrushToolInstances(toolGroupId);
+    brushBasedToolInstances.forEach((tool) => {
+        tool.configuration.brushSize = brushSize;
+        tool.invalidateBrushCursor();
+    });
+    const viewportsInfo = toolGroup.getViewportsInfo();
+    const viewportsInfoArray = Object.keys(viewportsInfo).map((key) => viewportsInfo[key]);
+    if (!viewportsInfoArray.length) {
+        return;
+    }
+    const { renderingEngineId } = viewportsInfoArray[0];
+    const viewportIds = toolGroup.getViewportIds();
+    const renderingEngine = getRenderingEngine(renderingEngineId);
+    triggerAnnotationRenderForViewportIds(renderingEngine, viewportIds);
+}
+export function getBrushSizeForToolGroup(toolGroupId) {
+    const toolGroup = getToolGroup(toolGroupId);
+    if (toolGroup === undefined) {
+        return;
+    }
+    const toolInstances = toolGroup._toolInstances;
+    if (!Object.keys(toolInstances).length) {
+        return;
+    }
+    const brushBasedToolInstances = getBrushToolInstances(toolGroupId);
+    const brushToolInstance = brushBasedToolInstances[0];
+    if (!brushToolInstance) {
+        return;
+    }
+    return brushToolInstance.configuration.brushSize;
+}
+//# sourceMappingURL=brushSizeForToolGroup.js.map

package/dist/esm/utilities/segmentation/brushSizeForToolGroup.js.map

@@ -0,0 +1 @@
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package/dist/esm/utilities/segmentation/brushThresholdForToolGroup.d.ts

@@ -0,0 +1,3 @@
+import type { Types } from '@cornerstonejs/core';
+export declare function setBrushThresholdForToolGroup(toolGroupId: string, threshold: Types.Point2): void;
+export declare function getBrushThresholdForToolGroup(toolGroupId: string): any;

package/dist/esm/utilities/segmentation/brushThresholdForToolGroup.js

@@ -0,0 +1,41 @@
+import { getToolGroup } from '../../store/ToolGroupManager';
+import triggerAnnotationRenderForViewportIds from '../triggerAnnotationRenderForViewportIds';
+import { getRenderingEngine } from '@cornerstonejs/core';
+import getBrushToolInstances from './utilities';
+export function setBrushThresholdForToolGroup(toolGroupId, threshold) {
+    const toolGroup = getToolGroup(toolGroupId);
+    if (toolGroup === undefined) {
+        return;
+    }
+    const brushBasedToolInstances = getBrushToolInstances(toolGroupId);
+    brushBasedToolInstances.forEach((tool) => {
+        tool.configuration.strategySpecificConfiguration.THRESHOLD_INSIDE_CIRCLE.threshold =
+            threshold;
+    });
+    const viewportsInfo = toolGroup.getViewportsInfo();
+    if (!viewportsInfo.length) {
+        return;
+    }
+    const { renderingEngineId } = viewportsInfo[0];
+    const viewportIds = toolGroup.getViewportIds();
+    const renderingEngine = getRenderingEngine(renderingEngineId);
+    triggerAnnotationRenderForViewportIds(renderingEngine, viewportIds);
+}
+export function getBrushThresholdForToolGroup(toolGroupId) {
+    const toolGroup = getToolGroup(toolGroupId);
+    if (toolGroup === undefined) {
+        return;
+    }
+    const toolInstances = toolGroup._toolInstances;
+    if (!Object.keys(toolInstances).length) {
+        return;
+    }
+    const brushBasedToolInstances = getBrushToolInstances(toolGroupId);
+    const brushToolInstance = brushBasedToolInstances[0];
+    if (!brushToolInstance) {
+        return;
+    }
+    return brushToolInstance.configuration.strategySpecificConfiguration
+        .THRESHOLD_INSIDE_CIRCLE.threshold;
+}
+//# sourceMappingURL=brushThresholdForToolGroup.js.map

package/dist/esm/utilities/segmentation/brushThresholdForToolGroup.js.map

@@ -0,0 +1 @@
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package/dist/esm/utilities/segmentation/createLabelmapVolumeForViewport.js

@@ -9,7 +9,7 @@ export default async function createLabelmapVolumeForViewport(input) {
     }
     const { viewport } = enabledElement;
     if (!(viewport instanceof VolumeViewport)) {
-        throw new Error('Segmentation not ready for stackViewport');
+        throw new Error('Segmentation only supports VolumeViewport');
     }
     const { uid } = viewport.getDefaultActor();
     if (segmentationId === undefined) {

package/dist/esm/utilities/segmentation/createLabelmapVolumeForViewport.js.map

@@ -1 +1 @@
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package/dist/esm/utilities/segmentation/floodFill.d.ts

@@ -0,0 +1,3 @@
+import type { FloodFillResult, FloodFillGetter, FloodFillOptions } from '../../types';
+import { Types } from '@cornerstonejs/core';
+export default function (getter: FloodFillGetter, seed: Types.Point2 | Types.Point3, options?: FloodFillOptions): FloodFillResult;

package/dist/esm/utilities/segmentation/floodFill.js

@@ -0,0 +1,128 @@
+export default function (getter, seed, options = {}) {
+    const onFlood = options.onFlood;
+    const onBoundary = options.onBoundary;
+    const equals = options.equals || defaultEquals;
+    const diagonals = options.diagonals || false;
+    const startNode = get(seed);
+    const permutations = prunedPermutations();
+    const stack = [];
+    const flooded = [];
+    const visits = {};
+    const bounds = {};
+    stack.push({ currentArgs: seed });
+    while (stack.length > 0) {
+        flood(stack.pop());
+    }
+    return {
+        flooded,
+        boundaries: boundaries(),
+    };
+    function flood(job) {
+        const getArgs = job.currentArgs;
+        const prevArgs = job.previousArgs;
+        if (visited(getArgs)) {
+            return;
+        }
+        markAsVisited(getArgs);
+        if (member(getArgs)) {
+            markAsFlooded(getArgs);
+            pushAdjacent(getArgs);
+        }
+        else {
+            markAsBoundary(prevArgs);
+        }
+    }
+    function visited(key) {
+        return visits[key] === true;
+    }
+    function markAsVisited(key) {
+        visits[key] = true;
+    }
+    function member(getArgs) {
+        const node = safely(get, [getArgs]);
+        return safely(equals, [node, startNode]);
+    }
+    function markAsFlooded(getArgs) {
+        flooded.push(getArgs);
+        if (onFlood) {
+            onFlood(...getArgs);
+        }
+    }
+    function markAsBoundary(prevArgs) {
+        bounds[prevArgs] = prevArgs;
+        if (onBoundary) {
+            onBoundary(...prevArgs);
+        }
+    }
+    function pushAdjacent(getArgs) {
+        for (let i = 0; i < permutations.length; i += 1) {
+            const perm = permutations[i];
+            const nextArgs = getArgs.slice(0);
+            for (let j = 0; j < getArgs.length; j += 1) {
+                nextArgs[j] += perm[j];
+            }
+            stack.push({
+                currentArgs: nextArgs,
+                previousArgs: getArgs,
+            });
+        }
+    }
+    function get(getArgs) {
+        return getter(...getArgs);
+    }
+    function safely(f, args) {
+        try {
+            return f(...args);
+        }
+        catch (error) {
+            return;
+        }
+    }
+    function prunedPermutations() {
+        const permutations = permute(seed.length);
+        return permutations.filter(function (perm) {
+            const count = countNonZeroes(perm);
+            return count !== 0 && (count === 1 || diagonals);
+        });
+    }
+    function permute(length) {
+        const perms = [];
+        const permutation = function (string) {
+            return string.split('').map(function (c) {
+                return parseInt(c, 10) - 1;
+            });
+        };
+        for (let i = 0; i < Math.pow(3, length); i += 1) {
+            const string = lpad(i.toString(3), '0', length);
+            perms.push(permutation(string));
+        }
+        return perms;
+    }
+    function boundaries() {
+        const array = [];
+        for (const key in bounds) {
+            if (bounds[key] !== undefined) {
+                array.unshift(bounds[key]);
+            }
+        }
+        return array;
+    }
+}
+function defaultEquals(a, b) {
+    return a === b;
+}
+function countNonZeroes(array) {
+    let count = 0;
+    for (let i = 0; i < array.length; i += 1) {
+        if (array[i] !== 0) {
+            count += 1;
+        }
+    }
+    return count;
+}
+function lpad(string, character, length) {
+    const array = new Array(length + 1);
+    const pad = array.join(character);
+    return (pad + string).slice(-length);
+}
+//# sourceMappingURL=floodFill.js.map

package/dist/esm/utilities/segmentation/floodFill.js.map

@@ -0,0 +1 @@
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package/dist/esm/utilities/segmentation/index.d.ts

@@ -5,4 +5,7 @@ import isValidRepresentationConfig from './isValidRepresentationConfig';
 import getDefaultRepresentationConfig from './getDefaultRepresentationConfig';
 import createLabelmapVolumeForViewport from './createLabelmapVolumeForViewport';
 import { triggerSegmentationRender } from './triggerSegmentationRender';
-export { thresholdVolumeByRange, createMergedLabelmapForIndex, isValidRepresentationConfig, getDefaultRepresentationConfig, createLabelmapVolumeForViewport, rectangleROIThresholdVolumeByRange, triggerSegmentationRender, };
+import floodFill from './floodFill';
+import { getBrushSizeForToolGroup, setBrushSizeForToolGroup } from './brushSizeForToolGroup';
+import { getBrushThresholdForToolGroup, setBrushThresholdForToolGroup } from './brushThresholdForToolGroup';
+export { thresholdVolumeByRange, createMergedLabelmapForIndex, isValidRepresentationConfig, getDefaultRepresentationConfig, createLabelmapVolumeForViewport, rectangleROIThresholdVolumeByRange, triggerSegmentationRender, floodFill, getBrushSizeForToolGroup, setBrushSizeForToolGroup, getBrushThresholdForToolGroup, setBrushThresholdForToolGroup, };

package/dist/esm/utilities/segmentation/index.js

@@ -5,5 +5,8 @@ import isValidRepresentationConfig from './isValidRepresentationConfig';
 import getDefaultRepresentationConfig from './getDefaultRepresentationConfig';
 import createLabelmapVolumeForViewport from './createLabelmapVolumeForViewport';
 import { triggerSegmentationRender } from './triggerSegmentationRender';
-export { thresholdVolumeByRange, createMergedLabelmapForIndex, isValidRepresentationConfig, getDefaultRepresentationConfig, createLabelmapVolumeForViewport, rectangleROIThresholdVolumeByRange, triggerSegmentationRender, };
+import floodFill from './floodFill';
+import { getBrushSizeForToolGroup, setBrushSizeForToolGroup, } from './brushSizeForToolGroup';
+import { getBrushThresholdForToolGroup, setBrushThresholdForToolGroup, } from './brushThresholdForToolGroup';
+export { thresholdVolumeByRange, createMergedLabelmapForIndex, isValidRepresentationConfig, getDefaultRepresentationConfig, createLabelmapVolumeForViewport, rectangleROIThresholdVolumeByRange, triggerSegmentationRender, floodFill, getBrushSizeForToolGroup, setBrushSizeForToolGroup, getBrushThresholdForToolGroup, setBrushThresholdForToolGroup, };
 //# sourceMappingURL=index.js.map

package/dist/esm/utilities/segmentation/index.js.map

@@ -1 +1 @@
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package/dist/esm/utilities/segmentation/utilities.d.ts

@@ -0,0 +1,2 @@
+import BrushTool from '../../tools/segmentation/BrushTool';
+export default function getBrushToolInstances(toolGroupId: any): BrushTool[];

package/dist/esm/utilities/segmentation/utilities.js

@@ -0,0 +1,15 @@
+import { getToolGroup } from '../../store/ToolGroupManager';
+import BrushTool from '../../tools/segmentation/BrushTool';
+export default function getBrushToolInstances(toolGroupId) {
+    const toolGroup = getToolGroup(toolGroupId);
+    if (toolGroup === undefined) {
+        return;
+    }
+    const toolInstances = toolGroup._toolInstances;
+    if (!Object.keys(toolInstances).length) {
+        return;
+    }
+    const brushBasedToolInstances = Object.values(toolInstances).filter((toolInstance) => toolInstance instanceof BrushTool);
+    return brushBasedToolInstances;
+}
+//# sourceMappingURL=utilities.js.map

package/dist/esm/utilities/segmentation/utilities.js.map

@@ -0,0 +1 @@
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package/dist/esm/utilities/viewport/isViewportPreScaled.js

@@ -1,6 +1,6 @@
-import { cache, StackViewport, VolumeViewport, } from '@cornerstonejs/core';
+import { cache, StackViewport, BaseVolumeViewport, } from '@cornerstonejs/core';
 function isViewportPreScaled(viewport, targetId) {
-    if (viewport instanceof VolumeViewport) {
+    if (viewport instanceof BaseVolumeViewport) {
         const volumeId = targetId.split('volumeId:')[1];
         const volume = cache.getVolume(volumeId);
         return volume.scaling && Object.keys(volume.scaling).length > 0;

package/dist/esm/utilities/viewport/isViewportPreScaled.js.map

@@ -1 +1 @@
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