@cornerstonejs/dicom-image-loader 2.0.0-beta.1 → 2.0.0-beta.10

package/dist/esm/src/imageLoader/wadors/getTagValue.js

@@ -0,0 +1,10 @@
+export default function getTagValue(tag, justElement = true) {
+    if (tag && tag.Value) {
+        if (tag.Value[0] && justElement) {
+            return tag.Value[0];
+        }
+        return tag.Value;
+    }
+    return tag;
+}
+//# sourceMappingURL=getTagValue.js.map

package/dist/esm/src/imageLoader/wadors/getTagValue.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"getTagValue.js","sourceRoot":"","sources":["../../../../../src/imageLoader/wadors/getTagValue.ts"],"names":[],"mappings":"AAAA,MAAM,CAAC,OAAO,UAAU,WAAW,CAAC,GAAG,EAAE,WAAW,GAAG,IAAI;IACzD,IAAI,GAAG,IAAI,GAAG,CAAC,KAAK,EAAE,CAAC;QACrB,IAAI,GAAG,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI,WAAW,EAAE,CAAC;YAChC,OAAO,GAAG,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC;QACtB,CAAC;QAED,OAAO,GAAG,CAAC,KAAK,CAAC;IACnB,CAAC;IAED,OAAO,GAAG,CAAC;AACb,CAAC"}

package/dist/esm/src/imageLoader/wadors/index.js

@@ -0,0 +1,22 @@
+import { getNumberString, getNumberValue, getNumberValues, getValue, metaDataProvider, } from './metaData/index';
+import findIndexOfString from './findIndexOfString';
+import getPixelData from './getPixelData';
+import metaDataManager from './metaDataManager';
+import loadImage from './loadImage';
+import register from './register';
+const metaData = {
+    getNumberString,
+    getNumberValue,
+    getNumberValues,
+    getValue,
+    metaDataProvider,
+};
+export default {
+    metaData,
+    findIndexOfString,
+    getPixelData,
+    loadImage,
+    metaDataManager,
+    register,
+};
+//# sourceMappingURL=index.js.map

package/dist/esm/src/imageLoader/wadors/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../../src/imageLoader/wadors/index.ts"],"names":[],"mappings":"AAAA,OAAO,EACL,eAAe,EACf,cAAc,EACd,eAAe,EACf,QAAQ,EACR,gBAAgB,GACjB,MAAM,kBAAkB,CAAC;AAE1B,OAAO,iBAAiB,MAAM,qBAAqB,CAAC;AACpD,OAAO,YAAY,MAAM,gBAAgB,CAAC;AAC1C,OAAO,eAAe,MAAM,mBAAmB,CAAC;AAChD,OAAO,SAAS,MAAM,aAAa,CAAC;AACpC,OAAO,QAAQ,MAAM,YAAY,CAAC;AAElC,MAAM,QAAQ,GAAG;IACf,eAAe;IACf,cAAc;IACd,eAAe;IACf,QAAQ;IACR,gBAAgB;CACjB,CAAC;AAEF,eAAe;IACb,QAAQ;IACR,iBAAiB;IACjB,YAAY;IACZ,SAAS;IACT,eAAe;IACf,QAAQ;CACT,CAAC"}

package/dist/esm/src/imageLoader/wadors/loadImage.js

@@ -0,0 +1,126 @@
+import { Enums, utilities } from '@cornerstonejs/core';
+import external from '../../externalModules';
+import createImage from '../createImage';
+import getPixelData from './getPixelData';
+const { ProgressiveIterator } = utilities;
+const { ImageQualityStatus } = Enums;
+const streamableTransferSyntaxes = new Set([
+    '3.2.840.10008.1.2.4.96',
+    '1.2.840.10008.1.2.4.202',
+    '1.2.840.10008.1.2.4.203',
+]);
+export function getTransferSyntaxForContentType(contentType) {
+    const defaultTransferSyntax = '1.2.840.10008.1.2';
+    if (!contentType) {
+        return defaultTransferSyntax;
+    }
+    const parameters = contentType.split(';');
+    const params = {};
+    parameters.forEach((parameter) => {
+        const parameterValues = parameter.split('=');
+        if (parameterValues.length !== 2) {
+            return;
+        }
+        const value = parameterValues[1].trim().replace(/"/g, '');
+        params[parameterValues[0].trim()] = value;
+    });
+    const defaultTransferSyntaxByType = {
+        'image/jpeg': '1.2.840.10008.1.2.4.50',
+        'image/x-dicom-rle': '1.2.840.10008.1.2.5',
+        'image/x-jls': '1.2.840.10008.1.2.4.80',
+        'image/jls': '1.2.840.10008.1.2.4.80',
+        'image/jll': '1.2.840.10008.1.2.4.70',
+        'image/jp2': '1.2.840.10008.1.2.4.90',
+        'image/jpx': '1.2.840.10008.1.2.4.92',
+        'image/jphc': '3.2.840.10008.1.2.4.96',
+        'image/jxl': '1.2.840.10008.1.2.4.140',
+    };
+    if (params['transfer-syntax']) {
+        return params['transfer-syntax'];
+    }
+    else if (contentType &&
+        !Object.keys(params).length &&
+        defaultTransferSyntaxByType[contentType]) {
+        return defaultTransferSyntaxByType[contentType];
+    }
+    else if (params.type && defaultTransferSyntaxByType[params.type]) {
+        return defaultTransferSyntaxByType[params.type];
+    }
+    else if (defaultTransferSyntaxByType[contentType]) {
+        return defaultTransferSyntaxByType[contentType];
+    }
+    return defaultTransferSyntax;
+}
+function getImageRetrievalPool() {
+    return external.cornerstone.imageRetrievalPoolManager;
+}
+const mediaType = 'multipart/related; type=application/octet-stream; transfer-syntax=*';
+function loadImage(imageId, options = {}) {
+    const imageRetrievalPool = getImageRetrievalPool();
+    const start = new Date().getTime();
+    const uncompressedIterator = new ProgressiveIterator('decompress');
+    async function sendXHR(imageURI, imageId, mediaType) {
+        uncompressedIterator.generate(async (it) => {
+            const compressedIt = ProgressiveIterator.as(getPixelData(imageURI, imageId, mediaType, options));
+            let lastDecodeLevel = 10;
+            for await (const result of compressedIt) {
+                const { pixelData, imageQualityStatus = ImageQualityStatus.FULL_RESOLUTION, percentComplete, done = true, extractDone = true, } = result;
+                const transferSyntax = getTransferSyntaxForContentType(result.contentType);
+                if (!extractDone && !streamableTransferSyntaxes.has(transferSyntax)) {
+                    continue;
+                }
+                const decodeLevel = result.decodeLevel ??
+                    (imageQualityStatus === ImageQualityStatus.FULL_RESOLUTION
+                        ? 0
+                        : decodeLevelFromComplete(percentComplete, options.retrieveOptions?.decodeLevel));
+                if (!done && lastDecodeLevel <= decodeLevel) {
+                    continue;
+                }
+                try {
+                    const useOptions = {
+                        ...options,
+                        decodeLevel,
+                    };
+                    const image = (await createImage(imageId, pixelData, transferSyntax, useOptions));
+                    const end = new Date().getTime();
+                    image.loadTimeInMS = end - start;
+                    image.transferSyntaxUID = transferSyntax;
+                    image.imageQualityStatus = imageQualityStatus;
+                    it.add(image, done);
+                    lastDecodeLevel = decodeLevel;
+                }
+                catch (e) {
+                    if (extractDone) {
+                        console.warn("Couldn't decode", e);
+                        throw e;
+                    }
+                }
+            }
+        });
+    }
+    const requestType = options.requestType || 'interaction';
+    const additionalDetails = options.additionalDetails || { imageId };
+    const priority = options.priority === undefined ? 5 : options.priority;
+    const addToBeginning = options.addToBeginning || false;
+    const uri = imageId.substring(7);
+    imageRetrievalPool.addRequest(sendXHR.bind(this, uri, imageId, mediaType), requestType, additionalDetails, priority, addToBeginning);
+    return {
+        promise: uncompressedIterator.getDonePromise(),
+        cancelFn: undefined,
+    };
+}
+function decodeLevelFromComplete(percent, retrieveDecodeLevel = 4) {
+    const testSize = percent / 100 - 0.02;
+    if (testSize > 1 / 4) {
+        return Math.min(retrieveDecodeLevel, 0);
+    }
+    if (testSize > 1 / 16) {
+        return Math.min(retrieveDecodeLevel, 1);
+    }
+    if (testSize > 1 / 64) {
+        return Math.min(retrieveDecodeLevel, 2);
+    }
+    return Math.min(retrieveDecodeLevel, 3);
+}
+export default loadImage;
+//# sourceMappingURL=loadImage.js.map

package/dist/esm/src/imageLoader/wadors/loadImage.js.map

@@ -0,0 +1 @@
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package/dist/esm/src/imageLoader/wadors/loadImage_test.js

@@ -0,0 +1,42 @@
+import { expect } from 'chai';
+import { getTransferSyntaxForContentType } from './loadImage';
+const cases = [
+    [undefined, '1.2.840.10008.1.2'],
+    [null, '1.2.840.10008.1.2'],
+    ['', '1.2.840.10008.1.2'],
+    ['multipart/related; type="application/octet-stream"', '1.2.840.10008.1.2'],
+    [
+        'multipart/related; type="application/octet-stream"; transfer-syntax= ',
+        '1.2.840.10008.1.2',
+    ],
+    [
+        'multipart/related; type=image/dicom+jpeg; transfer-syntax=1.2.840.10008.1.2.4.70',
+        '1.2.840.10008.1.2.4.70',
+    ],
+    [
+        'multipart/related; image/dicom+jpx; transfer-syntax=1.2.840.10008.1.2.4.93',
+        '1.2.840.10008.1.2.4.93',
+    ],
+    [
+        'multipart/related; video/mpeg; transfer-syntax=1.2.840.10008.1.2.4.100',
+        '1.2.840.10008.1.2.4.100',
+    ],
+    ['multipart/related; type="image/jpeg"', '1.2.840.10008.1.2.4.50'],
+    ['multipart/related; type="image/x-jls"', '1.2.840.10008.1.2.4.80'],
+    ['multipart/related; type="image/x-dicom-rle"', '1.2.840.10008.1.2.5'],
+    ['multipart/related; type="image/jp2"', '1.2.840.10008.1.2.4.90'],
+    ['multipart/related; type="image/jpx"', '1.2.840.10008.1.2.4.92'],
+];
+describe('#getTransferSyntaxForContentType', function () {
+    cases.forEach(function (testCase) {
+        const contentType = testCase[0];
+        const expectedTransferSyntax = testCase[1];
+        it(`given a content type of ${contentType}, should return ${expectedTransferSyntax}`, () => {
+            const transferSyntax = getTransferSyntaxForContentType(contentType);
+            console.log(transferSyntax);
+            console.log(expectedTransferSyntax);
+            expect(transferSyntax).to.be.equal(expectedTransferSyntax);
+        });
+    });
+});
+//# sourceMappingURL=loadImage_test.js.map

package/dist/esm/src/imageLoader/wadors/loadImage_test.js.map

@@ -0,0 +1 @@
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package/dist/esm/src/imageLoader/wadors/metaData/NMHelpers.js

@@ -0,0 +1,39 @@
+import getTagValue from '../getTagValue';
+import getValue from './getValue';
+import isNMReconstructable from '../../isNMReconstructable';
+import getNumberValues from './getNumberValues';
+function isNMModality(metaData) {
+    const modality = getValue(metaData['00080060']);
+    return modality.includes('NM');
+}
+function getImageTypeSubItemFromMetadata(metaData, index) {
+    const imageType = getTagValue(metaData['00080008'], false);
+    if (imageType) {
+        return imageType[index];
+    }
+    return undefined;
+}
+function extractOrientationFromNMMultiframeMetadata(metaData) {
+    let imageOrientationPatient;
+    const imageSubType = getImageTypeSubItemFromMetadata(metaData, 2);
+    if (imageSubType && isNMReconstructable(imageSubType)) {
+        const detectorInformationSequence = getTagValue(metaData['00540022']);
+        if (detectorInformationSequence) {
+            imageOrientationPatient = getNumberValues(detectorInformationSequence['00200037'], 6);
+        }
+    }
+    return imageOrientationPatient;
+}
+function extractPositionFromNMMultiframeMetadata(metaData) {
+    let imagePositionPatient;
+    const imageSubType = getImageTypeSubItemFromMetadata(metaData, 2);
+    if (imageSubType && isNMReconstructable(imageSubType)) {
+        const detectorInformationSequence = getTagValue(metaData['00540022']);
+        if (detectorInformationSequence) {
+            imagePositionPatient = getNumberValues(detectorInformationSequence['00200032'], 3);
+        }
+    }
+    return imagePositionPatient;
+}
+export { extractOrientationFromNMMultiframeMetadata, extractPositionFromNMMultiframeMetadata, isNMModality, getImageTypeSubItemFromMetadata, };
+//# sourceMappingURL=NMHelpers.js.map

package/dist/esm/src/imageLoader/wadors/metaData/NMHelpers.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"NMHelpers.js","sourceRoot":"","sources":["../../../../../../src/imageLoader/wadors/metaData/NMHelpers.ts"],"names":[],"mappings":"AAAA,OAAO,WAAW,MAAM,gBAAgB,CAAC;AACzC,OAAO,QAAQ,MAAM,YAAY,CAAC;AAClC,OAAO,mBAAmB,MAAM,2BAA2B,CAAC;AAC5D,OAAO,eAAe,MAAM,mBAAmB,CAAC;AAEhD,SAAS,YAAY,CAAC,QAAQ;IAC5B,MAAM,QAAQ,GAAG,QAAQ,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAW,CAAC;IAE1D,OAAO,QAAQ,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC;AACjC,CAAC;AAOD,SAAS,+BAA+B,CAAC,QAAQ,EAAE,KAAK;IACtD,MAAM,SAAS,GAAG,WAAW,CAAC,QAAQ,CAAC,UAAU,CAAC,EAAE,KAAK,CAAC,CAAC;IAE3D,IAAI,SAAS,EAAE,CAAC;QAMd,OAAO,SAAS,CAAC,KAAK,CAAC,CAAC;IAC1B,CAAC;IAED,OAAO,SAAS,CAAC;AACnB,CAAC;AAOD,SAAS,0CAA0C,CAAC,QAAQ;IAC1D,IAAI,uBAAuB,CAAC;IAC5B,MAAM,YAAY,GAAG,+BAA+B,CAAC,QAAQ,EAAE,CAAC,CAAC,CAAC;IAElE,IAAI,YAAY,IAAI,mBAAmB,CAAC,YAAY,CAAC,EAAE,CAAC;QACtD,MAAM,2BAA2B,GAAG,WAAW,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAC,CAAC;QAEtE,IAAI,2BAA2B,EAAE,CAAC;YAChC,uBAAuB,GAAG,eAAe,CACvC,2BAA2B,CAAC,UAAU,CAAC,EACvC,CAAC,CACF,CAAC;QACJ,CAAC;IACH,CAAC;IAED,OAAO,uBAAuB,CAAC;AACjC,CAAC;AAQD,SAAS,uCAAuC,CAAC,QAAQ;IACvD,IAAI,oBAAoB,CAAC;IACzB,MAAM,YAAY,GAAG,+BAA+B,CAAC,QAAQ,EAAE,CAAC,CAAC,CAAC;IAElE,IAAI,YAAY,IAAI,mBAAmB,CAAC,YAAY,CAAC,EAAE,CAAC;QACtD,MAAM,2BAA2B,GAAG,WAAW,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAC,CAAC;QAEtE,IAAI,2BAA2B,EAAE,CAAC;YAChC,oBAAoB,GAAG,eAAe,CACpC,2BAA2B,CAAC,UAAU,CAAC,EACvC,CAAC,CACF,CAAC;QACJ,CAAC;IACH,CAAC;IAED,OAAO,oBAAoB,CAAC;AAC9B,CAAC;AAED,OAAO,EACL,0CAA0C,EAC1C,uCAAuC,EACvC,YAAY,EACZ,+BAA+B,GAChC,CAAC"}

package/dist/esm/src/imageLoader/wadors/metaData/USHelpers.js

@@ -0,0 +1,47 @@
+import { getFirstNumberValue } from './getFirstNumberValue';
+import getSequenceItems from './getSequenceItems';
+function getUSEnhancedRegions(metadata) {
+    const sequenceOfUltrasoundRegions = getSequenceItems(metadata['00186011']);
+    if (!sequenceOfUltrasoundRegions || !sequenceOfUltrasoundRegions.length) {
+        return null;
+    }
+    const regions = sequenceOfUltrasoundRegions.map((sequence) => {
+        const physicalDeltaX = getFirstNumberValue(sequence, '0018602C');
+        const physicalDeltaY = getFirstNumberValue(sequence, '0018602E');
+        const physicalUnitsXDirection = getFirstNumberValue(sequence, '00186024');
+        const physicalUnitsYDirection = getFirstNumberValue(sequence, '00186026');
+        const regionLocationMinY0 = getFirstNumberValue(sequence, '0018601A');
+        const regionLocationMaxY1 = getFirstNumberValue(sequence, '0018601E');
+        const regionLocationMinX0 = getFirstNumberValue(sequence, '00186018');
+        const regionLocationMaxX1 = getFirstNumberValue(sequence, '0018601C');
+        const referencePixelX0 = getFirstNumberValue(sequence, '00186020');
+        const referencePixelY0 = getFirstNumberValue(sequence, '00186022');
+        const referencePhysicalPixelValueY = getFirstNumberValue(sequence, '0018602A');
+        const referencePhysicalPixelValueX = getFirstNumberValue(sequence, '00186028');
+        const regionSpatialFormat = getFirstNumberValue(sequence, '00186012');
+        const regionDataType = getFirstNumberValue(sequence, '00186014');
+        const regionFlags = getFirstNumberValue(sequence, '00186016');
+        const transducerFrequency = getFirstNumberValue(sequence, '00186030');
+        return {
+            regionLocationMinY0,
+            regionLocationMaxY1,
+            regionLocationMinX0,
+            regionLocationMaxX1,
+            referencePixelX0,
+            referencePixelY0,
+            physicalDeltaX,
+            physicalDeltaY,
+            physicalUnitsXDirection,
+            physicalUnitsYDirection,
+            referencePhysicalPixelValueY,
+            referencePhysicalPixelValueX,
+            regionSpatialFormat,
+            regionDataType,
+            regionFlags,
+            transducerFrequency,
+        };
+    });
+    return regions;
+}
+export { getUSEnhancedRegions };
+//# sourceMappingURL=USHelpers.js.map

package/dist/esm/src/imageLoader/wadors/metaData/USHelpers.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"USHelpers.js","sourceRoot":"","sources":["../../../../../../src/imageLoader/wadors/metaData/USHelpers.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,mBAAmB,EAAE,MAAM,uBAAuB,CAAC;AAC5D,OAAO,gBAAgB,MAAM,oBAAoB,CAAC;AAOlD,SAAS,oBAAoB,CAAC,QAAQ;IACpC,MAAM,2BAA2B,GAAG,gBAAgB,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAC,CAAC;IAE3E,IAAI,CAAC,2BAA2B,IAAI,CAAC,2BAA2B,CAAC,MAAM,EAAE,CAAC;QACxE,OAAO,IAAI,CAAC;IACd,CAAC;IAED,MAAM,OAAO,GAAG,2BAA2B,CAAC,GAAG,CAAC,CAAC,QAAQ,EAAE,EAAE;QAC3D,MAAM,cAAc,GAAG,mBAAmB,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAC;QACjE,MAAM,cAAc,GAAG,mBAAmB,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAC;QACjE,MAAM,uBAAuB,GAAG,mBAAmB,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAC;QAC1E,MAAM,uBAAuB,GAAG,mBAAmB,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAC;QAE1E,MAAM,mBAAmB,GAAG,mBAAmB,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAC;QACtE,MAAM,mBAAmB,GAAG,mBAAmB,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAC;QACtE,MAAM,mBAAmB,GAAG,mBAAmB,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAC;QACtE,MAAM,mBAAmB,GAAG,mBAAmB,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAC;QACtE,MAAM,gBAAgB,GAAG,mBAAmB,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAC;QACnE,MAAM,gBAAgB,GAAG,mBAAmB,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAC;QAEnE,MAAM,4BAA4B,GAAG,mBAAmB,CACtD,QAAQ,EACR,UAAU,CACX,CAAC;QACF,MAAM,4BAA4B,GAAG,mBAAmB,CACtD,QAAQ,EACR,UAAU,CACX,CAAC;QACF,MAAM,mBAAmB,GAAG,mBAAmB,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAC;QAEtE,MAAM,cAAc,GAAG,mBAAmB,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAC;QACjE,MAAM,WAAW,GAAG,mBAAmB,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAC;QAC9D,MAAM,mBAAmB,GAAG,mBAAmB,CAAC,QAAQ,EAAE,UAAU,CAAC,CAAC;QAEtE,OAAO;YACL,mBAAmB;YACnB,mBAAmB;YACnB,mBAAmB;YACnB,mBAAmB;YACnB,gBAAgB;YAChB,gBAAgB;YAChB,cAAc;YACd,cAAc;YACd,uBAAuB;YACvB,uBAAuB;YACvB,4BAA4B;YAC5B,4BAA4B;YAC5B,mBAAmB;YACnB,cAAc;YACd,WAAW;YACX,mBAAmB;SACpB,CAAC;IACJ,CAAC,CAAC,CAAC;IAEH,OAAO,OAAO,CAAC;AACjB,CAAC;AACD,OAAO,EAAE,oBAAoB,EAAE,CAAC"}

package/dist/esm/src/imageLoader/wadors/metaData/extractPositioningFromMetadata.js

@@ -0,0 +1,19 @@
+import getNumberValues from './getNumberValues';
+import { extractOrientationFromNMMultiframeMetadata, extractPositionFromNMMultiframeMetadata, isNMModality, } from './NMHelpers';
+function extractOrientationFromMetadata(metaData) {
+    let imageOrientationPatient = getNumberValues(metaData['00200037'], 6);
+    if (!imageOrientationPatient && isNMModality(metaData)) {
+        imageOrientationPatient =
+            extractOrientationFromNMMultiframeMetadata(metaData);
+    }
+    return imageOrientationPatient;
+}
+function extractPositionFromMetadata(metaData) {
+    let imagePositionPatient = getNumberValues(metaData['00200032'], 3);
+    if (!imagePositionPatient && isNMModality(metaData)) {
+        imagePositionPatient = extractPositionFromNMMultiframeMetadata(metaData);
+    }
+    return imagePositionPatient;
+}
+export { extractOrientationFromMetadata, extractPositionFromMetadata };
+//# sourceMappingURL=extractPositioningFromMetadata.js.map

package/dist/esm/src/imageLoader/wadors/metaData/extractPositioningFromMetadata.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"extractPositioningFromMetadata.js","sourceRoot":"","sources":["../../../../../../src/imageLoader/wadors/metaData/extractPositioningFromMetadata.ts"],"names":[],"mappings":"AAAA,OAAO,eAAe,MAAM,mBAAmB,CAAC;AAChD,OAAO,EACL,0CAA0C,EAC1C,uCAAuC,EACvC,YAAY,GACb,MAAM,aAAa,CAAC;AASrB,SAAS,8BAA8B,CAAC,QAAQ;IAC9C,IAAI,uBAAuB,GAAG,eAAe,CAAC,QAAQ,CAAC,UAAU,CAAC,EAAE,CAAC,CAAC,CAAC;IAMvE,IAAI,CAAC,uBAAuB,IAAI,YAAY,CAAC,QAAQ,CAAC,EAAE,CAAC;QACvD,uBAAuB;YACrB,0CAA0C,CAAC,QAAQ,CAAC,CAAC;IACzD,CAAC;IAED,OAAO,uBAAuB,CAAC;AACjC,CAAC;AASD,SAAS,2BAA2B,CAAC,QAAQ;IAC3C,IAAI,oBAAoB,GAAG,eAAe,CAAC,QAAQ,CAAC,UAAU,CAAC,EAAE,CAAC,CAAC,CAAC;IAIpE,IAAI,CAAC,oBAAoB,IAAI,YAAY,CAAC,QAAQ,CAAC,EAAE,CAAC;QACpD,oBAAoB,GAAG,uCAAuC,CAAC,QAAQ,CAAC,CAAC;IAC3E,CAAC;IAED,OAAO,oBAAoB,CAAC;AAC9B,CAAC;AAED,OAAO,EAAE,8BAA8B,EAAE,2BAA2B,EAAE,CAAC"}

package/dist/esm/src/imageLoader/wadors/metaData/getFirstNumberValue.js

@@ -0,0 +1,7 @@
+import getNumberValues from './getNumberValues';
+function getFirstNumberValue(sequence, key) {
+    const values = getNumberValues(sequence[key]);
+    return values ? values[0] : null;
+}
+export { getFirstNumberValue };
+//# sourceMappingURL=getFirstNumberValue.js.map

package/dist/esm/src/imageLoader/wadors/metaData/getFirstNumberValue.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"getFirstNumberValue.js","sourceRoot":"","sources":["../../../../../../src/imageLoader/wadors/metaData/getFirstNumberValue.ts"],"names":[],"mappings":"AAAA,OAAO,eAAe,MAAM,mBAAmB,CAAC;AAQhD,SAAS,mBAAmB,CAAC,QAAa,EAAE,GAAW;IACrD,MAAM,MAAM,GAAG,eAAe,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC;IAC9C,OAAO,MAAM,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC;AACnC,CAAC;AAED,OAAO,EAAE,mBAAmB,EAAE,CAAC"}

package/dist/esm/src/imageLoader/wadors/metaData/getNumberString.js

@@ -0,0 +1,10 @@
+import getValue from './getValue';
+function getNumberString(element, index, defaultValue) {
+    const value = getValue(element, index, defaultValue);
+    if (value === undefined) {
+        return;
+    }
+    return parseFloat(value);
+}
+export default getNumberString;
+//# sourceMappingURL=getNumberString.js.map

package/dist/esm/src/imageLoader/wadors/metaData/getNumberString.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"getNumberString.js","sourceRoot":"","sources":["../../../../../../src/imageLoader/wadors/metaData/getNumberString.ts"],"names":[],"mappings":"AACA,OAAO,QAAQ,MAAM,YAAY,CAAC;AAUlC,SAAS,eAAe,CACtB,OAA8B,EAC9B,KAAa,EACb,YAAoB;IAEpB,MAAM,KAAK,GAAG,QAAQ,CAAM,OAAO,EAAE,KAAK,EAAE,YAAY,CAAC,CAAC;IAE1D,IAAI,KAAK,KAAK,SAAS,EAAE,CAAC;QACxB,OAAO;IACT,CAAC;IAED,OAAO,UAAU,CAAC,KAAK,CAAC,CAAC;AAC3B,CAAC;AAED,eAAe,eAAe,CAAC"}

package/dist/esm/src/imageLoader/wadors/metaData/getNumberValue.js

@@ -0,0 +1,10 @@
+import getValue from './getValue';
+function getNumberValue(element, index) {
+    const value = getValue(element, index);
+    if (value === undefined) {
+        return;
+    }
+    return parseFloat(value);
+}
+export default getNumberValue;
+//# sourceMappingURL=getNumberValue.js.map

package/dist/esm/src/imageLoader/wadors/metaData/getNumberValue.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"getNumberValue.js","sourceRoot":"","sources":["../../../../../../src/imageLoader/wadors/metaData/getNumberValue.ts"],"names":[],"mappings":"AACA,OAAO,QAAQ,MAAM,YAAY,CAAC;AAElC,SAAS,cAAc,CACrB,OAA8B,EAC9B,KAAc;IAEd,MAAM,KAAK,GAAG,QAAQ,CAAM,OAAO,EAAE,KAAK,CAAC,CAAC;IAE5C,IAAI,KAAK,KAAK,SAAS,EAAE,CAAC;QACxB,OAAO;IACT,CAAC;IAED,OAAO,UAAU,CAAC,KAAK,CAAC,CAAC;AAC3B,CAAC;AAED,eAAe,cAAc,CAAC"}

package/dist/esm/src/imageLoader/wadors/metaData/getNumberValues.js

@@ -0,0 +1,21 @@
+function getNumberValues(element, minimumLength) {
+    if (!element) {
+        return;
+    }
+    if (!element.Value) {
+        return;
+    }
+    if (!Array.isArray(element.Value)) {
+        return;
+    }
+    if (minimumLength && element.Value.length < minimumLength) {
+        return;
+    }
+    const values = [];
+    for (let i = 0; i < element.Value.length; i++) {
+        values.push(parseFloat(element.Value[i]));
+    }
+    return values;
+}
+export default getNumberValues;
+//# sourceMappingURL=getNumberValues.js.map

package/dist/esm/src/imageLoader/wadors/metaData/getNumberValues.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"getNumberValues.js","sourceRoot":"","sources":["../../../../../../src/imageLoader/wadors/metaData/getNumberValues.ts"],"names":[],"mappings":"AASA,SAAS,eAAe,CACtB,OAA8B,EAC9B,aAAsB;IAEtB,IAAI,CAAC,OAAO,EAAE,CAAC;QACb,OAAO;IACT,CAAC;IAED,IAAI,CAAC,OAAO,CAAC,KAAK,EAAE,CAAC;QACnB,OAAO;IACT,CAAC;IAED,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC;QAClC,OAAO;IACT,CAAC;IAED,IAAI,aAAa,IAAI,OAAO,CAAC,KAAK,CAAC,MAAM,GAAG,aAAa,EAAE,CAAC;QAC1D,OAAO;IACT,CAAC;IAED,MAAM,MAAM,GAAa,EAAE,CAAC;IAE5B,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,OAAO,CAAC,KAAK,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE,CAAC;QAE9C,MAAM,CAAC,IAAI,CAAC,UAAU,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;IAC5C,CAAC;IAED,OAAO,MAAM,CAAC;AAChB,CAAC;AAED,eAAe,eAAe,CAAC"}

package/dist/esm/src/imageLoader/wadors/metaData/getOverlayPlaneModule.js

@@ -0,0 +1,39 @@
+import getValue from './getValue';
+import getNumberValue from './getNumberValue';
+export default function getOverlayPlaneModule(metaData) {
+    const overlays = [];
+    for (let overlayGroup = 0x00; overlayGroup <= 0x1e; overlayGroup += 0x02) {
+        let groupStr = `x60${overlayGroup.toString(16)}`;
+        if (groupStr.length === 4) {
+            groupStr = `x600${overlayGroup.toString(16)}`;
+        }
+        const data = getValue(metaData[`${groupStr}3000`]);
+        if (!data) {
+            continue;
+        }
+        const pixelData = [];
+        for (let i = 0; i < data.length; i++) {
+            for (let k = 0; k < 8; k++) {
+                const byte_as_int = metaData.Value[data.dataOffset + i];
+                pixelData[i * 8 + k] = (byte_as_int >> k) & 0b1;
+            }
+        }
+        overlays.push({
+            rows: getNumberValue(metaData[`${groupStr}0010`]),
+            columns: getNumberValue(metaData[`${groupStr}0011`]),
+            type: getValue(metaData[`${groupStr}0040`]),
+            x: getNumberValue(metaData[`${groupStr}0050`], 1) - 1,
+            y: getNumberValue(metaData[`${groupStr}0050`], 0) - 1,
+            pixelData,
+            description: getValue(metaData[`${groupStr}0022`]),
+            label: getValue(metaData[`${groupStr}1500`]),
+            roiArea: getValue(metaData[`${groupStr}1301`]),
+            roiMean: getValue(metaData[`${groupStr}1302`]),
+            roiStandardDeviation: getValue(metaData[`${groupStr}1303`]),
+        });
+    }
+    return {
+        overlays,
+    };
+}
+//# sourceMappingURL=getOverlayPlaneModule.js.map

package/dist/esm/src/imageLoader/wadors/metaData/getOverlayPlaneModule.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"getOverlayPlaneModule.js","sourceRoot":"","sources":["../../../../../../src/imageLoader/wadors/metaData/getOverlayPlaneModule.ts"],"names":[],"mappings":"AAAA,OAAO,QAAQ,MAAM,YAAY,CAAC;AAClC,OAAO,cAAc,MAAM,kBAAkB,CAAC;AAG9C,MAAM,CAAC,OAAO,UAAU,qBAAqB,CAAC,QAAwB;IACpE,MAAM,QAAQ,GAAG,EAAE,CAAC;IAEpB,KAAK,IAAI,YAAY,GAAG,IAAI,EAAE,YAAY,IAAI,IAAI,EAAE,YAAY,IAAI,IAAI,EAAE,CAAC;QACzE,IAAI,QAAQ,GAAG,MAAM,YAAY,CAAC,QAAQ,CAAC,EAAE,CAAC,EAAE,CAAC;QAEjD,IAAI,QAAQ,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YAC1B,QAAQ,GAAG,OAAO,YAAY,CAAC,QAAQ,CAAC,EAAE,CAAC,EAAE,CAAC;QAChD,CAAC;QAOD,MAAM,IAAI,GAAG,QAAQ,CAAM,QAAQ,CAAC,GAAG,QAAQ,MAAM,CAAC,CAAC,CAAC;QAExD,IAAI,CAAC,IAAI,EAAE,CAAC;YACV,SAAS;QACX,CAAC;QAED,MAAM,SAAS,GAAG,EAAE,CAAC;QAErB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,IAAI,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE,CAAC;YACrC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC;gBAC3B,MAAM,WAAW,GAAG,QAAQ,CAAC,KAAK,CAAC,IAAI,CAAC,UAAU,GAAG,CAAC,CAAC,CAAC;gBAExD,SAAS,CAAC,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC,GAAG,CAAC,WAAW,IAAI,CAAC,CAAC,GAAG,GAAG,CAAC;YAClD,CAAC;QACH,CAAC;QAED,QAAQ,CAAC,IAAI,CAAC;YACZ,IAAI,EAAE,cAAc,CAAC,QAAQ,CAAC,GAAG,QAAQ,MAAM,CAAC,CAAC;YACjD,OAAO,EAAE,cAAc,CAAC,QAAQ,CAAC,GAAG,QAAQ,MAAM,CAAC,CAAC;YACpD,IAAI,EAAE,QAAQ,CAAC,QAAQ,CAAC,GAAG,QAAQ,MAAM,CAAC,CAAC;YAC3C,CAAC,EAAE,cAAc,CAAC,QAAQ,CAAC,GAAG,QAAQ,MAAM,CAAC,EAAE,CAAC,CAAC,GAAG,CAAC;YACrD,CAAC,EAAE,cAAc,CAAC,QAAQ,CAAC,GAAG,QAAQ,MAAM,CAAC,EAAE,CAAC,CAAC,GAAG,CAAC;YACrD,SAAS;YACT,WAAW,EAAE,QAAQ,CAAC,QAAQ,CAAC,GAAG,QAAQ,MAAM,CAAC,CAAC;YAClD,KAAK,EAAE,QAAQ,CAAC,QAAQ,CAAC,GAAG,QAAQ,MAAM,CAAC,CAAC;YAC5C,OAAO,EAAE,QAAQ,CAAC,QAAQ,CAAC,GAAG,QAAQ,MAAM,CAAC,CAAC;YAC9C,OAAO,EAAE,QAAQ,CAAC,QAAQ,CAAC,GAAG,QAAQ,MAAM,CAAC,CAAC;YAC9C,oBAAoB,EAAE,QAAQ,CAAC,QAAQ,CAAC,GAAG,QAAQ,MAAM,CAAC,CAAC;SAC5D,CAAC,CAAC;IACL,CAAC;IAED,OAAO;QACL,QAAQ;KACT,CAAC;AACJ,CAAC"}

package/dist/esm/src/imageLoader/wadors/metaData/getSequenceItems.js

@@ -0,0 +1,15 @@
+function getSequenceItems(element) {
+    if (!element?.Value?.length) {
+        return [];
+    }
+    if (!Array.isArray(element.Value)) {
+        if (typeof element.Value === 'object') {
+            console.warn('Warning: Value should be an array, but an object was found. Encapsulating the object in an array.');
+            return [element.Value];
+        }
+        return [];
+    }
+    return element.Value;
+}
+export default getSequenceItems;
+//# sourceMappingURL=getSequenceItems.js.map

package/dist/esm/src/imageLoader/wadors/metaData/getSequenceItems.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"getSequenceItems.js","sourceRoot":"","sources":["../../../../../../src/imageLoader/wadors/metaData/getSequenceItems.ts"],"names":[],"mappings":"AAEA,SAAS,gBAAgB,CAAC,OAAY;IAEpC,IAAI,CAAC,OAAO,EAAE,KAAK,EAAE,MAAM,EAAE,CAAC;QAC5B,OAAO,EAAE,CAAC;IACZ,CAAC;IAED,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC;QAElC,IAAI,OAAO,OAAO,CAAC,KAAK,KAAK,QAAQ,EAAE,CAAC;YACtC,OAAO,CAAC,IAAI,CACV,mGAAmG,CACpG,CAAC;YACF,OAAO,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC;QACzB,CAAC;QACD,OAAO,EAAE,CAAC;IACZ,CAAC;IACD,OAAO,OAAO,CAAC,KAAK,CAAC;AACvB,CAAC;AAED,eAAe,gBAAgB,CAAC"}

package/dist/esm/src/imageLoader/wadors/metaData/getValue.js

@@ -0,0 +1,15 @@
+function getValue(element, index, defaultValue) {
+    index = index || 0;
+    if (!element) {
+        return defaultValue;
+    }
+    if (!element.Value) {
+        return defaultValue;
+    }
+    if (element.Value.length <= index) {
+        return defaultValue;
+    }
+    return element.Value[index];
+}
+export default getValue;
+//# sourceMappingURL=getValue.js.map

package/dist/esm/src/imageLoader/wadors/metaData/getValue.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"getValue.js","sourceRoot":"","sources":["../../../../../../src/imageLoader/wadors/metaData/getValue.ts"],"names":[],"mappings":"AAUA,SAAS,QAAQ,CACf,OAA8B,EAC9B,KAAc,EACd,YAAyB;IAEzB,KAAK,GAAG,KAAK,IAAI,CAAC,CAAC;IACnB,IAAI,CAAC,OAAO,EAAE,CAAC;QACb,OAAO,YAAY,CAAC;IACtB,CAAC;IAED,IAAI,CAAC,OAAO,CAAC,KAAK,EAAE,CAAC;QACnB,OAAO,YAAY,CAAC;IACtB,CAAC;IAED,IAAK,OAAO,CAAC,KAAa,CAAC,MAAM,IAAI,KAAK,EAAE,CAAC;QAC3C,OAAO,YAAY,CAAC;IACtB,CAAC;IAED,OAAO,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC;AAC9B,CAAC;AAED,eAAe,QAAQ,CAAC"}

package/dist/esm/src/imageLoader/wadors/metaData/index.js

@@ -0,0 +1,8 @@
+export { default as getNumberString } from './getNumberString';
+export { default as getNumberValue } from './getNumberValue';
+export { default as getNumberValues } from './getNumberValues';
+export { default as metaDataProvider } from './metaDataProvider';
+export { default as getValue } from './getValue';
+export { getFirstNumberValue } from './getFirstNumberValue';
+export { getUSEnhancedRegions } from './USHelpers';
+//# sourceMappingURL=index.js.map

package/dist/esm/src/imageLoader/wadors/metaData/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../../../src/imageLoader/wadors/metaData/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,IAAI,eAAe,EAAE,MAAM,mBAAmB,CAAC;AAC/D,OAAO,EAAE,OAAO,IAAI,cAAc,EAAE,MAAM,kBAAkB,CAAC;AAC7D,OAAO,EAAE,OAAO,IAAI,eAAe,EAAE,MAAM,mBAAmB,CAAC;AAC/D,OAAO,EAAE,OAAO,IAAI,gBAAgB,EAAE,MAAM,oBAAoB,CAAC;AACjE,OAAO,EAAE,OAAO,IAAI,QAAQ,EAAE,MAAM,YAAY,CAAC;AAEjD,OAAO,EAAE,mBAAmB,EAAE,MAAM,uBAAuB,CAAC;AAC5D,OAAO,EAAE,oBAAoB,EAAE,MAAM,aAAa,CAAC"}