@cornerstonejs/core 5.4.12 → 5.4.13

package/dist/esm/utilities/index.d.ts

@@ -104,6 +104,8 @@ import getVolumeViewReferenceId from './getVolumeViewReferenceId.js';
 import calculateSpacingBetweenImageIds from './calculateSpacingBetweenImageIds.js';
 export * as logger from './logger.js';
 import { calculateNeighborhoodStats } from './calculateNeighborhoodStats.js';
+import { mapScalarToViewportVoiIntensity, mapViewportVoiIntensityToScalar, mapMappedBandToRawRange } from './viewportVoiIntensityMapping.js';
+export type { ViewportVoiMappingProps } from './viewportVoiIntensityMapping.js';
 export * from './getPixelSpacingInformation.js';
 export * from './getPlaneCubeIntersectionDimensions.js';
 export * from './rotateToViewCoordinates.js';
@@ -114,4 +116,4 @@ export { updatePlaneRestriction } from './updatePlaneRestriction.js';
 declare const getViewportModality: (viewport: IViewport, volumeId?: string) => string;
 declare const getScalingDescriptor: (viewport: IViewport, targetId?: string) => import("../types/index.js").ScalingDescriptor;
 export * from './isEqual.js';
-export { FrameRange, eventListener, csUtils as invertRgbTransferFunction, createSigmoidRGBTransferFunction, getVoiFromSigmoidRGBTransferFunction, createLinearRGBTransferFunction, scaleRgbTransferFunction, triggerEvent, imageIdToURI, fnv1aHash, calibratedPixelSpacingMetadataProvider, clamp, uuidv4, getMinMax, clonePoint3, hasOwn, getRuntimeId, getVOIRangeFromWindowLevel, isOpposite, getViewportModality, getScalingDescriptor, resolveGenericViewportVolumeId, windowLevel, convertToGrayscale, convertColorArrayToRgbString, getClosestImageId, getSpacingInNormalDirection, getTargetVolumeAndSpacingInNormalDir, getVolumeActorCorners, indexWithinDimensions, indexAlmostWithinDimensions, getVolumeViewportsContainingSameVolumes, getViewportsWithVolumeId, transformWorldToIndex, transformIndexToWorld, loadImageToCanvas, renderToCanvasCPU, renderToCanvasGPU, worldToImageCoords, imageToWorldCoords, getVolumeSliceRangeInfo, getVolumeViewportScrollInfo, getSliceRange, snapFocalPointToSlice, getImageSliceDataForVolumeViewport, isImageActor, isPTPrescaledWithSUV, actorIsA, getViewportsWithImageURI, getClosestStackImageIndexForPoint, getCurrentVolumeViewportSlice, calculateViewportsSpatialRegistration, spatialRegistrationMetadataProvider, getViewportImageCornersInWorld, hasNaNValues, applyPreset, deepMerge, PointsManager, getScalingParameters, colormap, getImageLegacy, ProgressiveIterator, decimate, imageRetrieveMetadataProvider, genericViewportDisplaySetMetadataProvider, transferFunctionUtils, updateVTKImageDataWithCornerstoneImage, sortImageIdsAndGetSpacing, makeVolumeMetadata, isValidVolume, genericMetadataProvider, isVideoTransferSyntax, HistoryMemo, generateVolumePropsFromImageIds, getBufferConfiguration, VoxelManager, RLEVoxelMap, convertStackToVolumeViewport, convertVolumeToStackViewport, roundNumber, roundToPrecision, getViewportImageIds, getRandomSampleFromArray, getVolumeId, color, hasFloatScalingParameters, getDynamicVolumeInfo, autoLoad, scaleArray, deepClone, splitImageIdsBy4DTags, handleMultiframe4D, generateFrameImageId, pointInShapeCallback, ECGUtilities, VideoUtilities, WSIUtilities, deepEqual, jumpToSlice, scroll, clip, transformWorldToIndexContinuous, createSubVolume, getAcquisitionPlaneOrientation, getVolumeDirectionVectors, getVolumeViewReferenceId, calculateSpacingBetweenImageIds, getImageDataMetadata, buildMetadata, calculateNeighborhoodStats, asArray, viewportSupportsImageSlices, viewportSupportsStackCalibration, viewportSupportsStackCompatibility, viewportSupportsVolumeActors, viewportSupportsVolumeCompatibility, viewportSupportsVolumeId, viewportSupportsVolumeURI, isGenericViewport, viewportSupportsDisplaySetPresentation, getViewportContentMode, viewportIsInVolumeMode, viewportIsInStackMode, getNormalizedAspectRatio, };
+export { FrameRange, eventListener, csUtils as invertRgbTransferFunction, createSigmoidRGBTransferFunction, getVoiFromSigmoidRGBTransferFunction, createLinearRGBTransferFunction, scaleRgbTransferFunction, triggerEvent, imageIdToURI, fnv1aHash, calibratedPixelSpacingMetadataProvider, clamp, uuidv4, getMinMax, clonePoint3, hasOwn, getRuntimeId, getVOIRangeFromWindowLevel, isOpposite, getViewportModality, getScalingDescriptor, resolveGenericViewportVolumeId, windowLevel, convertToGrayscale, convertColorArrayToRgbString, getClosestImageId, getSpacingInNormalDirection, getTargetVolumeAndSpacingInNormalDir, getVolumeActorCorners, indexWithinDimensions, indexAlmostWithinDimensions, getVolumeViewportsContainingSameVolumes, getViewportsWithVolumeId, transformWorldToIndex, transformIndexToWorld, loadImageToCanvas, renderToCanvasCPU, renderToCanvasGPU, worldToImageCoords, imageToWorldCoords, getVolumeSliceRangeInfo, getVolumeViewportScrollInfo, getSliceRange, snapFocalPointToSlice, getImageSliceDataForVolumeViewport, isImageActor, isPTPrescaledWithSUV, actorIsA, getViewportsWithImageURI, getClosestStackImageIndexForPoint, getCurrentVolumeViewportSlice, calculateViewportsSpatialRegistration, spatialRegistrationMetadataProvider, getViewportImageCornersInWorld, hasNaNValues, applyPreset, deepMerge, PointsManager, getScalingParameters, colormap, getImageLegacy, ProgressiveIterator, decimate, imageRetrieveMetadataProvider, genericViewportDisplaySetMetadataProvider, transferFunctionUtils, updateVTKImageDataWithCornerstoneImage, sortImageIdsAndGetSpacing, makeVolumeMetadata, isValidVolume, genericMetadataProvider, isVideoTransferSyntax, HistoryMemo, generateVolumePropsFromImageIds, getBufferConfiguration, VoxelManager, RLEVoxelMap, convertStackToVolumeViewport, convertVolumeToStackViewport, roundNumber, roundToPrecision, getViewportImageIds, getRandomSampleFromArray, getVolumeId, color, hasFloatScalingParameters, getDynamicVolumeInfo, autoLoad, scaleArray, deepClone, splitImageIdsBy4DTags, handleMultiframe4D, generateFrameImageId, pointInShapeCallback, ECGUtilities, VideoUtilities, WSIUtilities, deepEqual, jumpToSlice, scroll, clip, transformWorldToIndexContinuous, createSubVolume, getAcquisitionPlaneOrientation, getVolumeDirectionVectors, getVolumeViewReferenceId, calculateSpacingBetweenImageIds, getImageDataMetadata, buildMetadata, calculateNeighborhoodStats, mapScalarToViewportVoiIntensity, mapViewportVoiIntensityToScalar, mapMappedBandToRawRange, asArray, viewportSupportsImageSlices, viewportSupportsStackCalibration, viewportSupportsStackCompatibility, viewportSupportsVolumeActors, viewportSupportsVolumeCompatibility, viewportSupportsVolumeId, viewportSupportsVolumeURI, isGenericViewport, viewportSupportsDisplaySetPresentation, getViewportContentMode, viewportIsInVolumeMode, viewportIsInStackMode, getNormalizedAspectRatio, };

package/dist/esm/utilities/index.js

@@ -106,6 +106,7 @@ import getVolumeViewReferenceId from './getVolumeViewReferenceId.js';
 import calculateSpacingBetweenImageIds from './calculateSpacingBetweenImageIds.js';
 export * as logger from './logger.js';
 import { calculateNeighborhoodStats } from './calculateNeighborhoodStats.js';
+import { mapScalarToViewportVoiIntensity, mapViewportVoiIntensityToScalar, mapMappedBandToRawRange, } from './viewportVoiIntensityMapping.js';
 export * from './getPixelSpacingInformation.js';
 export * from './getPlaneCubeIntersectionDimensions.js';
 export * from './rotateToViewCoordinates.js';
@@ -116,4 +117,4 @@ export { updatePlaneRestriction } from './updatePlaneRestriction.js';
 const getViewportModality = (viewport, volumeId) => _getViewportModality(viewport, volumeId, cache.getVolume);
 const getScalingDescriptor = (viewport, targetId) => _getScalingDescriptor(viewport, targetId, cache.getVolume);
 export * from './isEqual.js';
-export { FrameRange, eventListener, csUtils as invertRgbTransferFunction, createSigmoidRGBTransferFunction, getVoiFromSigmoidRGBTransferFunction, createLinearRGBTransferFunction, scaleRgbTransferFunction, triggerEvent, imageIdToURI, fnv1aHash, calibratedPixelSpacingMetadataProvider, clamp, uuidv4, getMinMax, clonePoint3, hasOwn, getRuntimeId, getVOIRangeFromWindowLevel, isOpposite, getViewportModality, getScalingDescriptor, resolveGenericViewportVolumeId, windowLevel, convertToGrayscale, convertColorArrayToRgbString, getClosestImageId, getSpacingInNormalDirection, getTargetVolumeAndSpacingInNormalDir, getVolumeActorCorners, indexWithinDimensions, indexAlmostWithinDimensions, getVolumeViewportsContainingSameVolumes, getViewportsWithVolumeId, transformWorldToIndex, transformIndexToWorld, loadImageToCanvas, renderToCanvasCPU, renderToCanvasGPU, worldToImageCoords, imageToWorldCoords, getVolumeSliceRangeInfo, getVolumeViewportScrollInfo, getSliceRange, snapFocalPointToSlice, getImageSliceDataForVolumeViewport, isImageActor, isPTPrescaledWithSUV, actorIsA, getViewportsWithImageURI, getClosestStackImageIndexForPoint, getCurrentVolumeViewportSlice, calculateViewportsSpatialRegistration, spatialRegistrationMetadataProvider, getViewportImageCornersInWorld, hasNaNValues, applyPreset, deepMerge, PointsManager, getScalingParameters, colormap, getImageLegacy, ProgressiveIterator, decimate, imageRetrieveMetadataProvider, genericViewportDisplaySetMetadataProvider, transferFunctionUtils, updateVTKImageDataWithCornerstoneImage, sortImageIdsAndGetSpacing, makeVolumeMetadata, isValidVolume, genericMetadataProvider, isVideoTransferSyntax, HistoryMemo, generateVolumePropsFromImageIds, getBufferConfiguration, VoxelManager, RLEVoxelMap, convertStackToVolumeViewport, convertVolumeToStackViewport, roundNumber, roundToPrecision, getViewportImageIds, getRandomSampleFromArray, getVolumeId, color, hasFloatScalingParameters, getDynamicVolumeInfo, autoLoad, scaleArray, deepClone, splitImageIdsBy4DTags, handleMultiframe4D, generateFrameImageId, pointInShapeCallback, ECGUtilities, VideoUtilities, WSIUtilities, deepEqual, jumpToSlice, scroll, clip, transformWorldToIndexContinuous, createSubVolume, getAcquisitionPlaneOrientation, getVolumeDirectionVectors, getVolumeViewReferenceId, calculateSpacingBetweenImageIds, getImageDataMetadata, buildMetadata, calculateNeighborhoodStats, asArray, viewportSupportsImageSlices, viewportSupportsStackCalibration, viewportSupportsStackCompatibility, viewportSupportsVolumeActors, viewportSupportsVolumeCompatibility, viewportSupportsVolumeId, viewportSupportsVolumeURI, isGenericViewport, viewportSupportsDisplaySetPresentation, getViewportContentMode, viewportIsInVolumeMode, viewportIsInStackMode, getNormalizedAspectRatio, };
+export { FrameRange, eventListener, csUtils as invertRgbTransferFunction, createSigmoidRGBTransferFunction, getVoiFromSigmoidRGBTransferFunction, createLinearRGBTransferFunction, scaleRgbTransferFunction, triggerEvent, imageIdToURI, fnv1aHash, calibratedPixelSpacingMetadataProvider, clamp, uuidv4, getMinMax, clonePoint3, hasOwn, getRuntimeId, getVOIRangeFromWindowLevel, isOpposite, getViewportModality, getScalingDescriptor, resolveGenericViewportVolumeId, windowLevel, convertToGrayscale, convertColorArrayToRgbString, getClosestImageId, getSpacingInNormalDirection, getTargetVolumeAndSpacingInNormalDir, getVolumeActorCorners, indexWithinDimensions, indexAlmostWithinDimensions, getVolumeViewportsContainingSameVolumes, getViewportsWithVolumeId, transformWorldToIndex, transformIndexToWorld, loadImageToCanvas, renderToCanvasCPU, renderToCanvasGPU, worldToImageCoords, imageToWorldCoords, getVolumeSliceRangeInfo, getVolumeViewportScrollInfo, getSliceRange, snapFocalPointToSlice, getImageSliceDataForVolumeViewport, isImageActor, isPTPrescaledWithSUV, actorIsA, getViewportsWithImageURI, getClosestStackImageIndexForPoint, getCurrentVolumeViewportSlice, calculateViewportsSpatialRegistration, spatialRegistrationMetadataProvider, getViewportImageCornersInWorld, hasNaNValues, applyPreset, deepMerge, PointsManager, getScalingParameters, colormap, getImageLegacy, ProgressiveIterator, decimate, imageRetrieveMetadataProvider, genericViewportDisplaySetMetadataProvider, transferFunctionUtils, updateVTKImageDataWithCornerstoneImage, sortImageIdsAndGetSpacing, makeVolumeMetadata, isValidVolume, genericMetadataProvider, isVideoTransferSyntax, HistoryMemo, generateVolumePropsFromImageIds, getBufferConfiguration, VoxelManager, RLEVoxelMap, convertStackToVolumeViewport, convertVolumeToStackViewport, roundNumber, roundToPrecision, getViewportImageIds, getRandomSampleFromArray, getVolumeId, color, hasFloatScalingParameters, getDynamicVolumeInfo, autoLoad, scaleArray, deepClone, splitImageIdsBy4DTags, handleMultiframe4D, generateFrameImageId, pointInShapeCallback, ECGUtilities, VideoUtilities, WSIUtilities, deepEqual, jumpToSlice, scroll, clip, transformWorldToIndexContinuous, createSubVolume, getAcquisitionPlaneOrientation, getVolumeDirectionVectors, getVolumeViewReferenceId, calculateSpacingBetweenImageIds, getImageDataMetadata, buildMetadata, calculateNeighborhoodStats, mapScalarToViewportVoiIntensity, mapViewportVoiIntensityToScalar, mapMappedBandToRawRange, asArray, viewportSupportsImageSlices, viewportSupportsStackCalibration, viewportSupportsStackCompatibility, viewportSupportsVolumeActors, viewportSupportsVolumeCompatibility, viewportSupportsVolumeId, viewportSupportsVolumeURI, isGenericViewport, viewportSupportsDisplaySetPresentation, getViewportContentMode, viewportIsInVolumeMode, viewportIsInStackMode, getNormalizedAspectRatio, };

package/dist/esm/utilities/logger.d.ts

@@ -1,3 +1,4 @@
 import { logging } from '@cornerstonejs/utils';
 export declare const getRootLogger: typeof logging.getRootLogger, getLogger: typeof logging.getLogger, cs3dLog: logging.Logger, workerLog: logging.Logger, coreLog: logging.Logger, toolsLog: logging.Logger, loaderLog: logging.Logger, aiLog: logging.Logger, examplesLog: logging.Logger, dicomConsistencyLog: logging.Logger, imageConsistencyLog: logging.Logger;
 export type Logger = logging.Logger;
+export declare const growCutLog: logging.Logger;

package/dist/esm/utilities/logger.js

@@ -1,2 +1,3 @@
 import { logging } from '@cornerstonejs/utils';
 export const { getRootLogger, getLogger, cs3dLog, workerLog, coreLog, toolsLog, loaderLog, aiLog, examplesLog, dicomConsistencyLog, imageConsistencyLog, } = logging;
+export const growCutLog = toolsLog.getLogger('growCut');

package/dist/esm/utilities/viewportVoiIntensityMapping.d.ts

@@ -0,0 +1,15 @@
+import VOILUTFunctionType from '../enums/VOILUTFunctionType.js';
+export type ViewportVoiMappingProps = {
+    voiRange: {
+        lower: number;
+        upper: number;
+    };
+    VOILUTFunction?: string | VOILUTFunctionType;
+    invert?: boolean;
+};
+export declare function mapScalarToViewportVoiIntensity(value: number, props: ViewportVoiMappingProps): number;
+export declare function mapViewportVoiIntensityToScalar(mapped01: number, props: ViewportVoiMappingProps): number;
+export declare function mapMappedBandToRawRange(mappedMin: number, mappedMax: number, props: ViewportVoiMappingProps): {
+    rawMin: number;
+    rawMax: number;
+};

package/dist/esm/utilities/viewportVoiIntensityMapping.js

@@ -0,0 +1,53 @@
+import VOILUTFunctionType from '../enums/VOILUTFunctionType.js';
+import { logit } from './logit.js';
+import * as windowLevelUtil from './windowLevel.js';
+const Y_EPS = 1e-6;
+export function mapScalarToViewportVoiIntensity(value, props) {
+    const { lower, upper } = props.voiRange;
+    const span = upper - lower;
+    const fn = props.VOILUTFunction;
+    const applyInvert = (y) => (props.invert === true ? 1 - y : y);
+    if (fn === VOILUTFunctionType.SAMPLED_SIGMOID || fn === 'SIGMOID') {
+        const { windowCenter, windowWidth } = windowLevelUtil.toWindowLevel(lower, upper);
+        const w = Math.max(Math.abs(windowWidth), 1e-12);
+        return applyInvert(1 / (1 + Math.exp((-4 * (value - windowCenter)) / w)));
+    }
+    if (span === 0 || !Number.isFinite(span)) {
+        return applyInvert(0);
+    }
+    return applyInvert(clamp01((value - lower) / span));
+}
+export function mapViewportVoiIntensityToScalar(mapped01, props) {
+    const { lower, upper } = props.voiRange;
+    const fn = props.VOILUTFunction;
+    const y = props.invert === true ? clamp01(1 - clamp01(mapped01)) : clamp01(mapped01);
+    if (fn === VOILUTFunctionType.SAMPLED_SIGMOID || fn === 'SIGMOID') {
+        const { windowCenter, windowWidth } = windowLevelUtil.toWindowLevel(lower, upper);
+        const yy = clamp(y, Y_EPS, 1 - Y_EPS);
+        return logit(yy, windowCenter, windowWidth);
+    }
+    const span = upper - lower;
+    if (span === 0 || !Number.isFinite(span)) {
+        return lower;
+    }
+    return lower + y * span;
+}
+export function mapMappedBandToRawRange(mappedMin, mappedMax, props) {
+    const a = Math.min(mappedMin, mappedMax);
+    const b = Math.max(mappedMin, mappedMax);
+    const rawAtA = mapViewportVoiIntensityToScalar(a, props);
+    const rawAtB = mapViewportVoiIntensityToScalar(b, props);
+    return {
+        rawMin: Math.min(rawAtA, rawAtB),
+        rawMax: Math.max(rawAtA, rawAtB),
+    };
+}
+function clamp01(x) {
+    if (!Number.isFinite(x)) {
+        return 0;
+    }
+    return clamp(x, 0, 1);
+}
+function clamp(x, lo, hi) {
+    return Math.min(hi, Math.max(lo, x));
+}

package/dist/esm/version.d.ts

@@ -1 +1 @@
-export declare const version = "5.4.12";
+export declare const version = "5.4.13";

package/dist/esm/version.js

@@ -1 +1 @@
-export const version = '5.4.12';
+export const version = '5.4.13';

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@cornerstonejs/core",
-  "version": "5.4.12",
+  "version": "5.4.13",
   "description": "Cornerstone3D Core",
   "module": "./dist/esm/index.js",
   "types": "./dist/esm/index.d.ts",
@@ -85,18 +85,18 @@
     "prepublishOnly": "pnpm run build"
   },
   "dependencies": {
-    "@cornerstonejs/utils": "5.4.12",
+    "@cornerstonejs/utils": "5.4.13",
     "@kitware/vtk.js": "35.5.3",
     "comlink": "4.4.2",
     "gl-matrix": "3.4.3",
     "loglevel": "1.9.2"
   },
   "devDependencies": {
-    "@cornerstonejs/metadata": "5.4.12"
+    "@cornerstonejs/metadata": "5.4.13"
   },
   "peerDependencies": {
-    "@cornerstonejs/metadata": "5.4.12",
-    "@cornerstonejs/utils": "5.4.12"
+    "@cornerstonejs/metadata": "5.4.13",
+    "@cornerstonejs/utils": "5.4.13"
   },
   "contributors": [
     {
@@ -109,5 +109,5 @@
     "type": "individual",
     "url": "https://ohif.org/donate"
   },
-  "gitHead": "0b67d01ebc033cc338c3612c1237b5d94025cac2"
+  "gitHead": "9f0b0f4813368e68bc0c04f02132e06f15b6a0f8"
 }