@cornerstonejs/core 3.8.1 → 3.8.2

package/dist/esm/utilities/calculateNeighborhoodStats.d.ts

@@ -0,0 +1,8 @@
+import type { PixelDataTypedArray, Point3 } from '../types';
+type NeighborhoodStats = {
+    mean: number;
+    stdDev: number;
+    count: number;
+};
+export declare function calculateNeighborhoodStats(scalarData: PixelDataTypedArray, dimensions: Point3, centerIjk: Point3, radius: number): NeighborhoodStats;
+export {};

package/dist/esm/utilities/calculateNeighborhoodStats.js

@@ -0,0 +1,42 @@
+export function calculateNeighborhoodStats(scalarData, dimensions, centerIjk, radius) {
+    const [width, height, numSlices] = dimensions;
+    const numPixelsPerSlice = width * height;
+    let sum = 0;
+    let sumSq = 0;
+    let count = 0;
+    const [cx, cy, cz] = centerIjk.map(Math.round);
+    for (let z = cz - radius; z <= cz + radius; z++) {
+        if (z < 0 || z >= numSlices) {
+            continue;
+        }
+        for (let y = cy - radius; y <= cy + radius; y++) {
+            if (y < 0 || y >= height) {
+                continue;
+            }
+            for (let x = cx - radius; x <= cx + radius; x++) {
+                if (x < 0 || x >= width) {
+                    continue;
+                }
+                const index = z * numPixelsPerSlice + y * width + x;
+                const value = scalarData[index];
+                sum += value;
+                sumSq += value * value;
+                count++;
+            }
+        }
+    }
+    if (count === 0) {
+        const centerIndex = cz * numPixelsPerSlice + cy * width + cx;
+        if (centerIndex >= 0 && centerIndex < scalarData.length) {
+            const centerValue = scalarData[centerIndex];
+            return { mean: centerValue, stdDev: 0, count: 1 };
+        }
+        else {
+            return { mean: 0, stdDev: 0, count: 0 };
+        }
+    }
+    const mean = sum / count;
+    const variance = sumSq / count - mean * mean;
+    const stdDev = Math.sqrt(Math.max(0, variance));
+    return { mean, stdDev, count };
+}

package/dist/esm/utilities/index.d.ts

@@ -92,5 +92,6 @@ import createSubVolume from './createSubVolume';
 import getVolumeDirectionVectors from './getVolumeDirectionVectors';
 import calculateSpacingBetweenImageIds from './calculateSpacingBetweenImageIds';
 export * as logger from './logger';
+import { calculateNeighborhoodStats } from './calculateNeighborhoodStats';
 declare const getViewportModality: (viewport: IViewport, volumeId?: string) => string;
-export { FrameRange, eventListener, csUtils as invertRgbTransferFunction, createSigmoidRGBTransferFunction, getVoiFromSigmoidRGBTransferFunction, createLinearRGBTransferFunction, scaleRgbTransferFunction, triggerEvent, imageIdToURI, fnv1aHash, calibratedPixelSpacingMetadataProvider, clamp, uuidv4, getMinMax, getRuntimeId, isEqual, isEqualAbs, isEqualNegative, isOpposite, getViewportModality, windowLevel, convertToGrayscale, getClosestImageId, getSpacingInNormalDirection, getTargetVolumeAndSpacingInNormalDir, getVolumeActorCorners, indexWithinDimensions, getVolumeViewportsContainingSameVolumes, getViewportsWithVolumeId, transformWorldToIndex, transformIndexToWorld, loadImageToCanvas, renderToCanvasCPU, renderToCanvasGPU, worldToImageCoords, imageToWorldCoords, getVolumeSliceRangeInfo, getVolumeViewportScrollInfo, getSliceRange, snapFocalPointToSlice, getImageSliceDataForVolumeViewport, isImageActor, isPTPrescaledWithSUV, actorIsA, getViewportsWithImageURI, getClosestStackImageIndexForPoint, getCurrentVolumeViewportSlice, calculateViewportsSpatialRegistration, spatialRegistrationMetadataProvider, getViewportImageCornersInWorld, hasNaNValues, applyPreset, deepMerge, PointsManager, getScalingParameters, colormap, getImageLegacy, ProgressiveIterator, decimate, imageRetrieveMetadataProvider, transferFunctionUtils, updateVTKImageDataWithCornerstoneImage, sortImageIdsAndGetSpacing, makeVolumeMetadata, isValidVolume, genericMetadataProvider, isVideoTransferSyntax, HistoryMemo, generateVolumePropsFromImageIds, getBufferConfiguration, VoxelManager, RLEVoxelMap, convertStackToVolumeViewport, convertVolumeToStackViewport, roundNumber, roundToPrecision, getViewportImageIds, getRandomSampleFromArray, getVolumeId, color, hasFloatScalingParameters, getDynamicVolumeInfo, autoLoad, scaleArray, deepClone, splitImageIdsBy4DTags, pointInShapeCallback, deepEqual, jumpToSlice, scroll, clip, transformWorldToIndexContinuous, createSubVolume, getVolumeDirectionVectors, calculateSpacingBetweenImageIds, getImageDataMetadata, buildMetadata, };
+export { FrameRange, eventListener, csUtils as invertRgbTransferFunction, createSigmoidRGBTransferFunction, getVoiFromSigmoidRGBTransferFunction, createLinearRGBTransferFunction, scaleRgbTransferFunction, triggerEvent, imageIdToURI, fnv1aHash, calibratedPixelSpacingMetadataProvider, clamp, uuidv4, getMinMax, getRuntimeId, isEqual, isEqualAbs, isEqualNegative, isOpposite, getViewportModality, windowLevel, convertToGrayscale, getClosestImageId, getSpacingInNormalDirection, getTargetVolumeAndSpacingInNormalDir, getVolumeActorCorners, indexWithinDimensions, getVolumeViewportsContainingSameVolumes, getViewportsWithVolumeId, transformWorldToIndex, transformIndexToWorld, loadImageToCanvas, renderToCanvasCPU, renderToCanvasGPU, worldToImageCoords, imageToWorldCoords, getVolumeSliceRangeInfo, getVolumeViewportScrollInfo, getSliceRange, snapFocalPointToSlice, getImageSliceDataForVolumeViewport, isImageActor, isPTPrescaledWithSUV, actorIsA, getViewportsWithImageURI, getClosestStackImageIndexForPoint, getCurrentVolumeViewportSlice, calculateViewportsSpatialRegistration, spatialRegistrationMetadataProvider, getViewportImageCornersInWorld, hasNaNValues, applyPreset, deepMerge, PointsManager, getScalingParameters, colormap, getImageLegacy, ProgressiveIterator, decimate, imageRetrieveMetadataProvider, transferFunctionUtils, updateVTKImageDataWithCornerstoneImage, sortImageIdsAndGetSpacing, makeVolumeMetadata, isValidVolume, genericMetadataProvider, isVideoTransferSyntax, HistoryMemo, generateVolumePropsFromImageIds, getBufferConfiguration, VoxelManager, RLEVoxelMap, convertStackToVolumeViewport, convertVolumeToStackViewport, roundNumber, roundToPrecision, getViewportImageIds, getRandomSampleFromArray, getVolumeId, color, hasFloatScalingParameters, getDynamicVolumeInfo, autoLoad, scaleArray, deepClone, splitImageIdsBy4DTags, pointInShapeCallback, deepEqual, jumpToSlice, scroll, clip, transformWorldToIndexContinuous, createSubVolume, getVolumeDirectionVectors, calculateSpacingBetweenImageIds, getImageDataMetadata, buildMetadata, calculateNeighborhoodStats, };

package/dist/esm/utilities/index.js

@@ -93,5 +93,6 @@ import createSubVolume from './createSubVolume';
 import getVolumeDirectionVectors from './getVolumeDirectionVectors';
 import calculateSpacingBetweenImageIds from './calculateSpacingBetweenImageIds';
 export * as logger from './logger';
+import { calculateNeighborhoodStats } from './calculateNeighborhoodStats';
 const getViewportModality = (viewport, volumeId) => _getViewportModality(viewport, volumeId, cache.getVolume);
-export { FrameRange, eventListener, csUtils as invertRgbTransferFunction, createSigmoidRGBTransferFunction, getVoiFromSigmoidRGBTransferFunction, createLinearRGBTransferFunction, scaleRgbTransferFunction, triggerEvent, imageIdToURI, fnv1aHash, calibratedPixelSpacingMetadataProvider, clamp, uuidv4, getMinMax, getRuntimeId, isEqual, isEqualAbs, isEqualNegative, isOpposite, getViewportModality, windowLevel, convertToGrayscale, getClosestImageId, getSpacingInNormalDirection, getTargetVolumeAndSpacingInNormalDir, getVolumeActorCorners, indexWithinDimensions, getVolumeViewportsContainingSameVolumes, getViewportsWithVolumeId, transformWorldToIndex, transformIndexToWorld, loadImageToCanvas, renderToCanvasCPU, renderToCanvasGPU, worldToImageCoords, imageToWorldCoords, getVolumeSliceRangeInfo, getVolumeViewportScrollInfo, getSliceRange, snapFocalPointToSlice, getImageSliceDataForVolumeViewport, isImageActor, isPTPrescaledWithSUV, actorIsA, getViewportsWithImageURI, getClosestStackImageIndexForPoint, getCurrentVolumeViewportSlice, calculateViewportsSpatialRegistration, spatialRegistrationMetadataProvider, getViewportImageCornersInWorld, hasNaNValues, applyPreset, deepMerge, PointsManager, getScalingParameters, colormap, getImageLegacy, ProgressiveIterator, decimate, imageRetrieveMetadataProvider, transferFunctionUtils, updateVTKImageDataWithCornerstoneImage, sortImageIdsAndGetSpacing, makeVolumeMetadata, isValidVolume, genericMetadataProvider, isVideoTransferSyntax, HistoryMemo, generateVolumePropsFromImageIds, getBufferConfiguration, VoxelManager, RLEVoxelMap, convertStackToVolumeViewport, convertVolumeToStackViewport, roundNumber, roundToPrecision, getViewportImageIds, getRandomSampleFromArray, getVolumeId, color, hasFloatScalingParameters, getDynamicVolumeInfo, autoLoad, scaleArray, deepClone, splitImageIdsBy4DTags, pointInShapeCallback, deepEqual, jumpToSlice, scroll, clip, transformWorldToIndexContinuous, createSubVolume, getVolumeDirectionVectors, calculateSpacingBetweenImageIds, getImageDataMetadata, buildMetadata, };
+export { FrameRange, eventListener, csUtils as invertRgbTransferFunction, createSigmoidRGBTransferFunction, getVoiFromSigmoidRGBTransferFunction, createLinearRGBTransferFunction, scaleRgbTransferFunction, triggerEvent, imageIdToURI, fnv1aHash, calibratedPixelSpacingMetadataProvider, clamp, uuidv4, getMinMax, getRuntimeId, isEqual, isEqualAbs, isEqualNegative, isOpposite, getViewportModality, windowLevel, convertToGrayscale, getClosestImageId, getSpacingInNormalDirection, getTargetVolumeAndSpacingInNormalDir, getVolumeActorCorners, indexWithinDimensions, getVolumeViewportsContainingSameVolumes, getViewportsWithVolumeId, transformWorldToIndex, transformIndexToWorld, loadImageToCanvas, renderToCanvasCPU, renderToCanvasGPU, worldToImageCoords, imageToWorldCoords, getVolumeSliceRangeInfo, getVolumeViewportScrollInfo, getSliceRange, snapFocalPointToSlice, getImageSliceDataForVolumeViewport, isImageActor, isPTPrescaledWithSUV, actorIsA, getViewportsWithImageURI, getClosestStackImageIndexForPoint, getCurrentVolumeViewportSlice, calculateViewportsSpatialRegistration, spatialRegistrationMetadataProvider, getViewportImageCornersInWorld, hasNaNValues, applyPreset, deepMerge, PointsManager, getScalingParameters, colormap, getImageLegacy, ProgressiveIterator, decimate, imageRetrieveMetadataProvider, transferFunctionUtils, updateVTKImageDataWithCornerstoneImage, sortImageIdsAndGetSpacing, makeVolumeMetadata, isValidVolume, genericMetadataProvider, isVideoTransferSyntax, HistoryMemo, generateVolumePropsFromImageIds, getBufferConfiguration, VoxelManager, RLEVoxelMap, convertStackToVolumeViewport, convertVolumeToStackViewport, roundNumber, roundToPrecision, getViewportImageIds, getRandomSampleFromArray, getVolumeId, color, hasFloatScalingParameters, getDynamicVolumeInfo, autoLoad, scaleArray, deepClone, splitImageIdsBy4DTags, pointInShapeCallback, deepEqual, jumpToSlice, scroll, clip, transformWorldToIndexContinuous, createSubVolume, getVolumeDirectionVectors, calculateSpacingBetweenImageIds, getImageDataMetadata, buildMetadata, calculateNeighborhoodStats, };

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@cornerstonejs/core",
-  "version": "3.8.1",
+  "version": "3.8.2",
   "description": "Cornerstone3D Core",
   "module": "./dist/esm/index.js",
   "types": "./dist/esm/index.d.ts",
@@ -91,5 +91,5 @@
     "type": "individual",
     "url": "https://ohif.org/donate"
   },
-  "gitHead": "1f45d352ecb6e239cb418f085cdabeca2a4520a9"
+  "gitHead": "d14852bdc9402b62ca685c559663438c19079e07"
 }