@cornerstonejs/core 1.38.0 → 1.39.0

package/dist/esm/utilities/getCurrentVolumeViewportSlice.js

@@ -0,0 +1,82 @@
+import { glMatrix, mat4, vec3 } from 'gl-matrix';
+import { transformIJKToCanvas } from './transformIJKToCanvas';
+import { transformCanvasToIJK } from './transformCanvasToIJK';
+function getCurrentVolumeViewportSlice(viewport) {
+    const { dimensions, scalarData } = viewport.getImageData();
+    const { width: canvasWidth, height: canvasHeight } = viewport.getCanvas();
+    const ijkOriginPoint = transformCanvasToIJK(viewport, [0, 0]);
+    const ijkRowPoint = transformCanvasToIJK(viewport, [canvasWidth - 1, 0]);
+    const ijkColPoint = transformCanvasToIJK(viewport, [0, canvasHeight - 1]);
+    const ijkRowVec = vec3.sub(vec3.create(), ijkRowPoint, ijkOriginPoint);
+    const ijkColVec = vec3.sub(vec3.create(), ijkColPoint, ijkOriginPoint);
+    const ijkSliceVec = vec3.cross(vec3.create(), ijkRowVec, ijkColVec);
+    vec3.normalize(ijkRowVec, ijkRowVec);
+    vec3.normalize(ijkColVec, ijkColVec);
+    vec3.normalize(ijkSliceVec, ijkSliceVec);
+    const maxIJKRowVec = Math.max(Math.abs(ijkRowVec[0]), Math.abs(ijkRowVec[1]), Math.abs(ijkRowVec[2]));
+    const maxIJKColVec = Math.max(Math.abs(ijkColVec[0]), Math.abs(ijkColVec[1]), Math.abs(ijkColVec[2]));
+    if (!glMatrix.equals(1, maxIJKRowVec) || !glMatrix.equals(1, maxIJKColVec)) {
+        throw new Error('Livewire is not available for rotate/oblique viewports');
+    }
+    const [sx, sy, sz] = dimensions;
+    const ijkCorners = [
+        [0, 0, 0],
+        [sx - 1, 0, 0],
+        [0, sy - 1, 0],
+        [sx - 1, sy - 1, 0],
+        [0, 0, sz - 1],
+        [sx - 1, 0, sz - 1],
+        [0, sy - 1, sz - 1],
+        [sx - 1, sy - 1, sz - 1],
+    ];
+    const canvasCorners = ijkCorners.map((ijkCorner) => transformIJKToCanvas(viewport, ijkCorner));
+    const canvasAABB = canvasCorners.reduce((aabb, canvasPoint) => {
+        aabb.minX = Math.min(aabb.minX, canvasPoint[0]);
+        aabb.minY = Math.min(aabb.minY, canvasPoint[1]);
+        aabb.maxX = Math.max(aabb.maxX, canvasPoint[0]);
+        aabb.maxY = Math.max(aabb.maxY, canvasPoint[1]);
+        return aabb;
+    }, { minX: Infinity, minY: Infinity, maxX: -Infinity, maxY: -Infinity });
+    const ijkTopLeft = transformCanvasToIJK(viewport, [
+        canvasAABB.minX,
+        canvasAABB.minY,
+    ]);
+    const ijkBottomRight = transformCanvasToIJK(viewport, [
+        canvasAABB.maxX,
+        canvasAABB.maxY,
+    ]);
+    const ijkDiagonal = vec3.sub(vec3.create(), ijkBottomRight, ijkTopLeft);
+    const sliceToIndexMatrix = mat4.fromValues(ijkRowVec[0], ijkRowVec[1], ijkRowVec[2], 0, ijkColVec[0], ijkColVec[1], ijkColVec[2], 0, ijkSliceVec[0], ijkSliceVec[1], ijkSliceVec[2], 0, ijkTopLeft[0], ijkTopLeft[1], ijkTopLeft[2], 1);
+    const indexToSliceMatrix = mat4.invert(mat4.create(), sliceToIndexMatrix);
+    const sliceWidth = vec3.dot(ijkRowVec, ijkDiagonal) + 1;
+    const sliceHeight = vec3.dot(ijkColVec, ijkDiagonal) + 1;
+    const TypedArray = scalarData.constructor;
+    const sliceData = new TypedArray(sliceWidth * sliceHeight);
+    const pixelsPerSlice = dimensions[0] * dimensions[1];
+    const ijkPixelRow = vec3.clone(ijkTopLeft);
+    const ijkPixelCol = vec3.create();
+    let slicePixelIndex = 0;
+    for (let y = 0; y < sliceHeight; y++) {
+        vec3.copy(ijkPixelCol, ijkPixelRow);
+        for (let x = 0; x < sliceWidth; x++) {
+            const volumePixelIndex = ijkPixelCol[2] * pixelsPerSlice +
+                ijkPixelCol[1] * dimensions[0] +
+                ijkPixelCol[0];
+            if (volumePixelIndex < scalarData.length) {
+                sliceData[slicePixelIndex] = scalarData[volumePixelIndex];
+            }
+            slicePixelIndex++;
+            vec3.add(ijkPixelCol, ijkPixelCol, ijkRowVec);
+        }
+        vec3.add(ijkPixelRow, ijkPixelRow, ijkColVec);
+    }
+    return {
+        width: sliceWidth,
+        height: sliceHeight,
+        scalarData: sliceData,
+        sliceToIndexMatrix,
+        indexToSliceMatrix,
+    };
+}
+export { getCurrentVolumeViewportSlice as default, getCurrentVolumeViewportSlice, };
+//# sourceMappingURL=getCurrentVolumeViewportSlice.js.map

package/dist/esm/utilities/getCurrentVolumeViewportSlice.js.map

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package/dist/esm/utilities/index.js

@@ -26,6 +26,7 @@ import indexWithinDimensions from './indexWithinDimensions';
 import getVolumeViewportsContainingSameVolumes from './getVolumeViewportsContainingSameVolumes';
 import getViewportsWithVolumeId from './getViewportsWithVolumeId';
 import transformWorldToIndex from './transformWorldToIndex';
+import transformIndexToWorld from './transformIndexToWorld';
 import loadImageToCanvas from './loadImageToCanvas';
 import renderToCanvasCPU from './renderToCanvasCPU';
 import renderToCanvasGPU from './renderToCanvasGPU';
@@ -39,6 +40,7 @@ import getImageSliceDataForVolumeViewport from './getImageSliceDataForVolumeView
 import { isImageActor, actorIsA } from './actorCheck';
 import getViewportsWithImageURI from './getViewportsWithImageURI';
 import getClosestStackImageIndexForPoint from './getClosestStackImageIndexForPoint';
+import getCurrentVolumeViewportSlice from './getCurrentVolumeViewportSlice';
 import calculateViewportsSpatialRegistration from './calculateViewportsSpatialRegistration';
 import spatialRegistrationMetadataProvider from './spatialRegistrationMetadataProvider';
 import getViewportImageCornersInWorld from './getViewportImageCornersInWorld';
@@ -64,5 +66,5 @@ import * as planar from './planar';
 import * as windowLevel from './windowLevel';
 import * as colormap from './colormap';
 import * as transferFunctionUtils from './transferFunctionUtils';
-export { eventListener, csUtils as invertRgbTransferFunction, createSigmoidRGBTransferFunction, getVoiFromSigmoidRGBTransferFunction, createLinearRGBTransferFunction, scaleRgbTransferFunction, triggerEvent, imageIdToURI, calibratedPixelSpacingMetadataProvider, clamp, uuidv4, planar, getMinMax, getRuntimeId, isEqual, isOpposite, createFloat32SharedArray, createUint8SharedArray, createUint16SharedArray, createInt16SharedArray, getViewportModality, windowLevel, getClosestImageId, getSpacingInNormalDirection, getTargetVolumeAndSpacingInNormalDir, getVolumeActorCorners, indexWithinDimensions, getVolumeViewportsContainingSameVolumes, getViewportsWithVolumeId, transformWorldToIndex, loadImageToCanvas, renderToCanvasCPU, renderToCanvasGPU, worldToImageCoords, imageToWorldCoords, getVolumeSliceRangeInfo, getVolumeViewportScrollInfo, getSliceRange, snapFocalPointToSlice, getImageSliceDataForVolumeViewport, isImageActor, isPTPrescaledWithSUV, actorIsA, getViewportsWithImageURI, getClosestStackImageIndexForPoint, calculateViewportsSpatialRegistration, spatialRegistrationMetadataProvider, getViewportImageCornersInWorld, hasNaNValues, applyPreset, deepMerge, getScalingParameters, getScalarDataType, colormap, getImageLegacy, ProgressiveIterator, decimate, imageRetrieveMetadataProvider, transferFunctionUtils, updateVTKImageDataWithCornerstoneImage, sortImageIdsAndGetSpacing, makeVolumeMetadata, isValidVolume, genericMetadataProvider, isVideoTransferSyntax, getBufferConfiguration, VoxelManager, };
+export { eventListener, csUtils as invertRgbTransferFunction, createSigmoidRGBTransferFunction, getVoiFromSigmoidRGBTransferFunction, createLinearRGBTransferFunction, scaleRgbTransferFunction, triggerEvent, imageIdToURI, calibratedPixelSpacingMetadataProvider, clamp, uuidv4, planar, getMinMax, getRuntimeId, isEqual, isOpposite, createFloat32SharedArray, createUint8SharedArray, createUint16SharedArray, createInt16SharedArray, getViewportModality, windowLevel, getClosestImageId, getSpacingInNormalDirection, getTargetVolumeAndSpacingInNormalDir, getVolumeActorCorners, indexWithinDimensions, getVolumeViewportsContainingSameVolumes, getViewportsWithVolumeId, transformWorldToIndex, transformIndexToWorld, loadImageToCanvas, renderToCanvasCPU, renderToCanvasGPU, worldToImageCoords, imageToWorldCoords, getVolumeSliceRangeInfo, getVolumeViewportScrollInfo, getSliceRange, snapFocalPointToSlice, getImageSliceDataForVolumeViewport, isImageActor, isPTPrescaledWithSUV, actorIsA, getViewportsWithImageURI, getClosestStackImageIndexForPoint, getCurrentVolumeViewportSlice, calculateViewportsSpatialRegistration, spatialRegistrationMetadataProvider, getViewportImageCornersInWorld, hasNaNValues, applyPreset, deepMerge, getScalingParameters, getScalarDataType, colormap, getImageLegacy, ProgressiveIterator, decimate, imageRetrieveMetadataProvider, transferFunctionUtils, updateVTKImageDataWithCornerstoneImage, sortImageIdsAndGetSpacing, makeVolumeMetadata, isValidVolume, genericMetadataProvider, isVideoTransferSyntax, getBufferConfiguration, VoxelManager, };
 //# sourceMappingURL=index.js.map

package/dist/esm/utilities/index.js.map

@@ -1 +1 @@
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package/dist/esm/utilities/transformCanvasToIJK.js

@@ -0,0 +1,7 @@
+import transformWorldToIndex from './transformWorldToIndex';
+export function transformCanvasToIJK(viewport, canvasPoint) {
+    const { imageData: vtkImageData } = viewport.getImageData();
+    const worldPoint = viewport.canvasToWorld(canvasPoint);
+    return transformWorldToIndex(vtkImageData, worldPoint);
+}
+//# sourceMappingURL=transformCanvasToIJK.js.map

package/dist/esm/utilities/transformCanvasToIJK.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"transformCanvasToIJK.js","sourceRoot":"","sources":["../../../src/utilities/transformCanvasToIJK.ts"],"names":[],"mappings":"AACA,OAAO,qBAAqB,MAAM,yBAAyB,CAAC;AAQ5D,MAAM,UAAU,oBAAoB,CAClC,QAA0C,EAC1C,WAAmB;IAEnB,MAAM,EAAE,SAAS,EAAE,YAAY,EAAE,GAAG,QAAQ,CAAC,YAAY,EAAE,CAAC;IAC5D,MAAM,UAAU,GAAG,QAAQ,CAAC,aAAa,CAAC,WAAW,CAAC,CAAC;IAEvD,OAAO,qBAAqB,CAAC,YAAY,EAAE,UAAU,CAAC,CAAC;AACzD,CAAC"}

package/dist/esm/utilities/transformIJKToCanvas.js

@@ -0,0 +1,7 @@
+import transformIndexToWorld from './transformIndexToWorld';
+export function transformIJKToCanvas(viewport, ijkPoint) {
+    const { imageData: vtkImageData } = viewport.getImageData();
+    const worldPoint = transformIndexToWorld(vtkImageData, ijkPoint);
+    return viewport.worldToCanvas(worldPoint);
+}
+//# sourceMappingURL=transformIJKToCanvas.js.map

package/dist/esm/utilities/transformIJKToCanvas.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"transformIJKToCanvas.js","sourceRoot":"","sources":["../../../src/utilities/transformIJKToCanvas.ts"],"names":[],"mappings":"AACA,OAAO,qBAAqB,MAAM,yBAAyB,CAAC;AAQ5D,MAAM,UAAU,oBAAoB,CAClC,QAA0C,EAC1C,QAAgB;IAEhB,MAAM,EAAE,SAAS,EAAE,YAAY,EAAE,GAAG,QAAQ,CAAC,YAAY,EAAE,CAAC;IAC5D,MAAM,UAAU,GAAG,qBAAqB,CAAC,YAAY,EAAE,QAAQ,CAAC,CAAC;IAEjE,OAAO,QAAQ,CAAC,aAAa,CAAC,UAAU,CAAC,CAAC;AAC5C,CAAC"}

package/dist/esm/utilities/transformIndexToWorld.js

@@ -0,0 +1,4 @@
+export default function transformIndexToWorld(imageData, voxelPos) {
+    return imageData.indexToWorld(voxelPos);
+}
+//# sourceMappingURL=transformIndexToWorld.js.map

package/dist/esm/utilities/transformIndexToWorld.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"transformIndexToWorld.js","sourceRoot":"","sources":["../../../src/utilities/transformIndexToWorld.ts"],"names":[],"mappings":"AAWA,MAAM,CAAC,OAAO,UAAU,qBAAqB,CAAC,SAAS,EAAE,QAAgB;IACvE,OAAO,SAAS,CAAC,YAAY,CAAC,QAAQ,CAAC,CAAC;AAC1C,CAAC"}

package/dist/types/RenderingEngine/Viewport.d.ts.map

@@ -1 +1 @@
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package/dist/types/utilities/getCurrentVolumeViewportSlice.d.ts

@@ -0,0 +1,11 @@
+import { mat4 } from 'gl-matrix';
+import { IVolumeViewport } from '../types';
+declare function getCurrentVolumeViewportSlice(viewport: IVolumeViewport): {
+    width: number;
+    height: number;
+    scalarData: any;
+    sliceToIndexMatrix: mat4;
+    indexToSliceMatrix: mat4;
+};
+export { getCurrentVolumeViewportSlice as default, getCurrentVolumeViewportSlice, };
+//# sourceMappingURL=getCurrentVolumeViewportSlice.d.ts.map

package/dist/types/utilities/getCurrentVolumeViewportSlice.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"getCurrentVolumeViewportSlice.d.ts","sourceRoot":"","sources":["../../../src/utilities/getCurrentVolumeViewportSlice.ts"],"names":[],"mappings":"AAAA,OAAO,EAAY,IAAI,EAAQ,MAAM,WAAW,CAAC;AACjD,OAAO,EAAE,eAAe,EAAU,MAAM,UAAU,CAAC;AAYnD,iBAAS,6BAA6B,CAAC,QAAQ,EAAE,eAAe;;;;;;EAmJ/D;AAED,OAAO,EACL,6BAA6B,IAAI,OAAO,EACxC,6BAA6B,GAC9B,CAAC"}

package/dist/types/utilities/index.d.ts

@@ -26,6 +26,7 @@ import indexWithinDimensions from './indexWithinDimensions';
 import getVolumeViewportsContainingSameVolumes from './getVolumeViewportsContainingSameVolumes';
 import getViewportsWithVolumeId from './getViewportsWithVolumeId';
 import transformWorldToIndex from './transformWorldToIndex';
+import transformIndexToWorld from './transformIndexToWorld';
 import loadImageToCanvas from './loadImageToCanvas';
 import renderToCanvasCPU from './renderToCanvasCPU';
 import renderToCanvasGPU from './renderToCanvasGPU';
@@ -39,6 +40,7 @@ import getImageSliceDataForVolumeViewport from './getImageSliceDataForVolumeView
 import { isImageActor, actorIsA } from './actorCheck';
 import getViewportsWithImageURI from './getViewportsWithImageURI';
 import getClosestStackImageIndexForPoint from './getClosestStackImageIndexForPoint';
+import getCurrentVolumeViewportSlice from './getCurrentVolumeViewportSlice';
 import calculateViewportsSpatialRegistration from './calculateViewportsSpatialRegistration';
 import spatialRegistrationMetadataProvider from './spatialRegistrationMetadataProvider';
 import getViewportImageCornersInWorld from './getViewportImageCornersInWorld';
@@ -64,5 +66,5 @@ import * as planar from './planar';
 import * as windowLevel from './windowLevel';
 import * as colormap from './colormap';
 import * as transferFunctionUtils from './transferFunctionUtils';
-export { eventListener, csUtils as invertRgbTransferFunction, createSigmoidRGBTransferFunction, getVoiFromSigmoidRGBTransferFunction, createLinearRGBTransferFunction, scaleRgbTransferFunction, triggerEvent, imageIdToURI, calibratedPixelSpacingMetadataProvider, clamp, uuidv4, planar, getMinMax, getRuntimeId, isEqual, isOpposite, createFloat32SharedArray, createUint8SharedArray, createUint16SharedArray, createInt16SharedArray, getViewportModality, windowLevel, getClosestImageId, getSpacingInNormalDirection, getTargetVolumeAndSpacingInNormalDir, getVolumeActorCorners, indexWithinDimensions, getVolumeViewportsContainingSameVolumes, getViewportsWithVolumeId, transformWorldToIndex, loadImageToCanvas, renderToCanvasCPU, renderToCanvasGPU, worldToImageCoords, imageToWorldCoords, getVolumeSliceRangeInfo, getVolumeViewportScrollInfo, getSliceRange, snapFocalPointToSlice, getImageSliceDataForVolumeViewport, isImageActor, isPTPrescaledWithSUV, actorIsA, getViewportsWithImageURI, getClosestStackImageIndexForPoint, calculateViewportsSpatialRegistration, spatialRegistrationMetadataProvider, getViewportImageCornersInWorld, hasNaNValues, applyPreset, deepMerge, getScalingParameters, getScalarDataType, colormap, getImageLegacy, ProgressiveIterator, decimate, imageRetrieveMetadataProvider, transferFunctionUtils, updateVTKImageDataWithCornerstoneImage, sortImageIdsAndGetSpacing, makeVolumeMetadata, isValidVolume, genericMetadataProvider, isVideoTransferSyntax, getBufferConfiguration, VoxelManager, };
+export { eventListener, csUtils as invertRgbTransferFunction, createSigmoidRGBTransferFunction, getVoiFromSigmoidRGBTransferFunction, createLinearRGBTransferFunction, scaleRgbTransferFunction, triggerEvent, imageIdToURI, calibratedPixelSpacingMetadataProvider, clamp, uuidv4, planar, getMinMax, getRuntimeId, isEqual, isOpposite, createFloat32SharedArray, createUint8SharedArray, createUint16SharedArray, createInt16SharedArray, getViewportModality, windowLevel, getClosestImageId, getSpacingInNormalDirection, getTargetVolumeAndSpacingInNormalDir, getVolumeActorCorners, indexWithinDimensions, getVolumeViewportsContainingSameVolumes, getViewportsWithVolumeId, transformWorldToIndex, transformIndexToWorld, loadImageToCanvas, renderToCanvasCPU, renderToCanvasGPU, worldToImageCoords, imageToWorldCoords, getVolumeSliceRangeInfo, getVolumeViewportScrollInfo, getSliceRange, snapFocalPointToSlice, getImageSliceDataForVolumeViewport, isImageActor, isPTPrescaledWithSUV, actorIsA, getViewportsWithImageURI, getClosestStackImageIndexForPoint, getCurrentVolumeViewportSlice, calculateViewportsSpatialRegistration, spatialRegistrationMetadataProvider, getViewportImageCornersInWorld, hasNaNValues, applyPreset, deepMerge, getScalingParameters, getScalarDataType, colormap, getImageLegacy, ProgressiveIterator, decimate, imageRetrieveMetadataProvider, transferFunctionUtils, updateVTKImageDataWithCornerstoneImage, sortImageIdsAndGetSpacing, makeVolumeMetadata, isValidVolume, genericMetadataProvider, isVideoTransferSyntax, getBufferConfiguration, VoxelManager, };
 //# sourceMappingURL=index.d.ts.map

package/dist/types/utilities/index.d.ts.map

@@ -1 +1 @@
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package/dist/types/utilities/transformCanvasToIJK.d.ts

@@ -0,0 +1,3 @@
+import { IStackViewport, IVolumeViewport, Point2 } from '../types';
+export declare function transformCanvasToIJK(viewport: IVolumeViewport | IStackViewport, canvasPoint: Point2): any;
+//# sourceMappingURL=transformCanvasToIJK.d.ts.map

package/dist/types/utilities/transformCanvasToIJK.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"transformCanvasToIJK.d.ts","sourceRoot":"","sources":["../../../src/utilities/transformCanvasToIJK.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,cAAc,EAAE,eAAe,EAAE,MAAM,EAAE,MAAM,UAAU,CAAC;AASnE,wBAAgB,oBAAoB,CAClC,QAAQ,EAAE,eAAe,GAAG,cAAc,EAC1C,WAAW,EAAE,MAAM,OAMpB"}

package/dist/types/utilities/transformIJKToCanvas.d.ts

@@ -0,0 +1,3 @@
+import { IStackViewport, IVolumeViewport, Point3 } from '../types';
+export declare function transformIJKToCanvas(viewport: IVolumeViewport | IStackViewport, ijkPoint: Point3): import("../types/Point2").default;
+//# sourceMappingURL=transformIJKToCanvas.d.ts.map

package/dist/types/utilities/transformIJKToCanvas.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"transformIJKToCanvas.d.ts","sourceRoot":"","sources":["../../../src/utilities/transformIJKToCanvas.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,cAAc,EAAE,eAAe,EAAE,MAAM,EAAE,MAAM,UAAU,CAAC;AASnE,wBAAgB,oBAAoB,CAClC,QAAQ,EAAE,eAAe,GAAG,cAAc,EAC1C,QAAQ,EAAE,MAAM,qCAMjB"}

package/dist/types/utilities/transformIndexToWorld.d.ts

@@ -0,0 +1,3 @@
+import type Point3 from '../types/Point3';
+export default function transformIndexToWorld(imageData: any, voxelPos: Point3): any;
+//# sourceMappingURL=transformIndexToWorld.d.ts.map

package/dist/types/utilities/transformIndexToWorld.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"transformIndexToWorld.d.ts","sourceRoot":"","sources":["../../../src/utilities/transformIndexToWorld.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,MAAM,MAAM,iBAAiB,CAAC;AAW1C,MAAM,CAAC,OAAO,UAAU,qBAAqB,CAAC,SAAS,KAAA,EAAE,QAAQ,EAAE,MAAM,OAExE"}