@cornerstonejs/adapters 2.0.0-beta.1 → 2.0.0-beta.2

package/dist/adapters.es.js

@@ -1,7 +1,7 @@
-import { utilities, derivations, normalizers, data, log } from 'dcmjs';
+import { data, utilities, derivations, normalizers, log } from 'dcmjs';
+import { Buffer } from 'buffer';
 import ndarray from 'ndarray';
 import cloneDeep from 'lodash.clonedeep';
-import { Buffer } from 'buffer';
 import { vec3 } from 'gl-matrix';
 
 function _iterableToArrayLimit(arr, i) {
@@ -545,9 +545,34 @@ var graphicTypeEquals = function (graphicType) {
     };
 };
 
+var datasetToDict = data.datasetToDict;
+/**
+ * Trigger file download from an array buffer
+ * @param bufferOrDataset - ArrayBuffer or DicomDataset
+ * @param filename - name of the file to download
+ */
+function downloadDICOMData(bufferOrDataset, filename) {
+    var blob;
+    if (bufferOrDataset instanceof ArrayBuffer) {
+        blob = new Blob([bufferOrDataset], { type: "application/dicom" });
+    }
+    else {
+        if (!bufferOrDataset._meta) {
+            throw new Error("Dataset must have a _meta property");
+        }
+        var buffer = Buffer.from(datasetToDict(bufferOrDataset).write());
+        blob = new Blob([buffer], { type: "application/dicom" });
+    }
+    var link = document.createElement("a");
+    link.href = window.URL.createObjectURL(blob);
+    link.download = filename;
+    link.click();
+}
+
 var index$1 = /*#__PURE__*/Object.freeze({
   __proto__: null,
   codeMeaningEquals: codeMeaningEquals,
+  downloadDICOMData: downloadDICOMData,
   graphicTypeEquals: graphicTypeEquals,
   toArray: toArray
 });
@@ -2240,8 +2265,7 @@ var _utilities$orientatio = utilities.orientation,
   flipMatrix2D = _utilities$orientatio.flipMatrix2D,
   rotateMatrix902D = _utilities$orientatio.rotateMatrix902D,
   nearlyEqual = _utilities$orientatio.nearlyEqual;
-var datasetToDict = data.datasetToDict,
-  BitArray$1 = data.BitArray,
+var BitArray$1 = data.BitArray,
   DicomMessage = data.DicomMessage,
   DicomMetaDictionary$1 = data.DicomMetaDictionary;
 var Normalizer$2 = normalizers.Normalizer;
@@ -2280,12 +2304,13 @@ function generateSegmentation$2(images, inputLabelmaps3D) {
 }
 
 /**
- * fillSegmentation - Fills a derived segmentation dataset with cornerstoneTools `LabelMap3D` data.
+ * Fills a given segmentation object with data from the input labelmaps3D
  *
- * @param  {object[]} segmentation An empty segmentation derived dataset.
- * @param  {Object|Object[]} inputLabelmaps3D The cornerstone `Labelmap3D` object, or an array of objects.
- * @param  {Object} userOptions Options object to override default options.
- * @returns {Blob}           description
+ * @param segmentation - The segmentation object to be filled.
+ * @param inputLabelmaps3D - An array of 3D labelmaps, or a single 3D labelmap.
+ * @param userOptions - Optional configuration settings. Will override the default options.
+ *
+ * @returns {object} The filled segmentation object.
  */
 function fillSegmentation$1(segmentation, inputLabelmaps3D) {
   var userOptions = arguments.length > 2 && arguments[2] !== undefined ? arguments[2] : {};
@@ -2367,11 +2392,7 @@ function fillSegmentation$1(segmentation, inputLabelmaps3D) {
     // If no rleEncoding, at least bitpack the data.
     segmentation.bitPackPixelData();
   }
-  var buffer = Buffer.from(datasetToDict(segmentation.dataset).write());
-  var segBlob = new Blob([buffer], {
-    type: "application/dicom"
-  });
-  return segBlob;
+  return segmentation;
 }
 function _getLabelmapsFromReferencedFrameIndicies(labelmap3D, referencedFrameIndicies) {
   var labelmaps2D = labelmap3D.labelmaps2D;
@@ -4853,6 +4874,7 @@ var SegmentationDerivation = derivations.Segmentation;
  * @param labelmaps - An array of the 3D Volumes that contain the segmentation data.
  */
 function generateSegmentation(images, labelmaps, metadata, options) {
+    if (options === void 0) { options = {}; }
     var segmentation = _createMultiframeSegmentationFromReferencedImages(images, metadata, options);
     return fillSegmentation$1(segmentation, labelmaps, options);
 }
@@ -4872,7 +4894,7 @@ function _createMultiframeSegmentationFromReferencedImages(images, metadata, opt
         var instance = metadata.get("instance", image.imageId);
         return __assign(__assign(__assign({}, image), instance), { 
             // Todo: move to dcmjs tag style
-            SOPClassUID: instance.SopClassUID, SOPInstanceUID: instance.SopInstanceUID, PixelData: image.getPixelData(), _vrMap: {
+            SOPClassUID: instance.SopClassUID || instance.SOPClassUID, SOPInstanceUID: instance.SopInstanceUID || instance.SOPInstanceUID, PixelData: image.getPixelData(), _vrMap: {
                 PixelData: "OW"
             }, _meta: {} });
     });
@@ -5163,7 +5185,7 @@ var adaptersSR = {
     Cornerstone3D: Cornerstone3DSR
 };
 var adaptersSEG = {
-    Cornerstone: CornerstoneSR,
+    Cornerstone: CornerstoneSEG,
     Cornerstone3D: Cornerstone3DSEG,
     VTKjs: VTKjsSEG
 };