@cornerstonejs/adapters 0.1.2

package/.babelrc

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+{
+  "presets": [
+    ["@babel/preset-env", {
+      "targets": {
+        "browsers": ["ie 11"]
+      }
+    }]
+  ]
+}

package/.eslintrc.json

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+{
+  "env": {
+    "browser": true,
+    "node": true,
+    "es6": true,
+    "jest": true
+  },
+
+  "extends": [
+    "eslint:recommended",
+    "prettier"
+  ],
+
+  "parserOptions": {
+    "ecmaVersion": 11,
+    "sourceType": "module"
+  }
+}

package/.prettierrc

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+{
+    "tabWidth": 4,
+    "trailingComma": "none",
+    "arrowParens": "avoid"
+}

package/CHANGELOG.md

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+# Change Log
+
+All notable changes to this project will be documented in this file.
+See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
+
+## [0.1.2](https://github.com/dcmjs-org/dcmjs/compare/@cornerstonejs/adapters@0.1.1...@cornerstonejs/adapters@0.1.2) (2023-01-27)
+
+
+### Bug Fixes
+
+* **build:** fixing publish of adapters in package json ([#396](https://github.com/dcmjs-org/dcmjs/issues/396)) ([5a45b2f](https://github.com/dcmjs-org/dcmjs/commit/5a45b2f9ebeca9b800642d2735720a8d8400cd12))
+
+
+
+
+
+## [0.1.1](https://github.com/dcmjs-org/dcmjs/compare/@cornerstonejs/adapters@0.1.0...@cornerstonejs/adapters@0.1.1) (2023-01-27)
+
+
+### Bug Fixes
+
+* **build:** try to publish adapters ([#395](https://github.com/dcmjs-org/dcmjs/issues/395)) ([191a17b](https://github.com/dcmjs-org/dcmjs/commit/191a17b690d2ac60ad98a4b8ecb8379a92638d67))
+
+
+
+
+
+# 0.1.0 (2023-01-27)
+
+### Bug Fixes
+
+-   🐛 adding readme notes ([#191](https://github.com/dcmjs-org/dcmjs/issues/191)) ([459260d](https://github.com/dcmjs-org/dcmjs/commit/459260d6e2a6f905729ddf68b1f12d3140b53849))
+-   🐛 fix array format regression from commit 70b24332783d63c9db2ed21d512d9f7b526c5222 ([#236](https://github.com/dcmjs-org/dcmjs/issues/236)) ([5441063](https://github.com/dcmjs-org/dcmjs/commit/5441063d0395ede6d9f8bd3ac0d92ee14f6ef209))
+-   🐛 Fix rotation mapping for SEG cornerstone adapter ([#151](https://github.com/dcmjs-org/dcmjs/issues/151)) ([3fab68c](https://github.com/dcmjs-org/dcmjs/commit/3fab68cbfd95f82820663b9fc99a2b0cd07e43c8))
+-   🐛 Harden Segmentation import for different possible SEGs ([#146](https://github.com/dcmjs-org/dcmjs/issues/146)) ([c4952bc](https://github.com/dcmjs-org/dcmjs/commit/c4952bc5842bab80a5d928de0d860f89afc8f400))
+-   🐛 IDC Re [#2003](https://github.com/dcmjs-org/dcmjs/issues/2003): fix regression in parsing segmentation orietations ([#220](https://github.com/dcmjs-org/dcmjs/issues/220)) ([5c0c6a8](https://github.com/dcmjs-org/dcmjs/commit/5c0c6a85e67b25ce5f39412ced37d8e825691481))
+-   🐛 IDC2733: find segmentations reference source image Ids ([#253](https://github.com/dcmjs-org/dcmjs/issues/253)) ([f3e7101](https://github.com/dcmjs-org/dcmjs/commit/f3e71016dffa233bf0fb912cc7cf413718b8a1a9))
+-   🐛 ignore frames without SourceImageSequence information when loading a segmentation ([#198](https://github.com/dcmjs-org/dcmjs/issues/198)) ([82709c4](https://github.com/dcmjs-org/dcmjs/commit/82709c4a8a317aa1354244010300ab9b902802dd))
+-   🐛 indentation in nearlyEqual ([#202](https://github.com/dcmjs-org/dcmjs/issues/202)) ([989d6c9](https://github.com/dcmjs-org/dcmjs/commit/989d6c9a80686425563c55424ac1795e6a06cd7b))
+-   🐛 relax condition in nearlyEquals check for detecting numbers near to zero ([#304](https://github.com/dcmjs-org/dcmjs/issues/304)) ([974cddd](https://github.com/dcmjs-org/dcmjs/commit/974cddd785c076f1ac0211b534a7c0b82a4ba68a))
+-   🐛 When converting to multiframe, fix IPP issues ([#152](https://github.com/dcmjs-org/dcmjs/issues/152)) ([80496e4](https://github.com/dcmjs-org/dcmjs/commit/80496e422152c1a3dfd850a145011dd3dc632964))
+-   **adapter:** Removed comment around getTID300RepresentationArguments 'tool' parameter ([#322](https://github.com/dcmjs-org/dcmjs/issues/322)) ([d8f05ff](https://github.com/dcmjs-org/dcmjs/commit/d8f05ffb9ef1b5cce254980a597b4c428ffdfb6e)), closes [#306](https://github.com/dcmjs-org/dcmjs/issues/306)
+-   **add check for nullable numeric string vrs:** adds a check for nullable numeric strinv vrs ([#150](https://github.com/dcmjs-org/dcmjs/issues/150)) ([75046c4](https://github.com/dcmjs-org/dcmjs/commit/75046c4e1b2830dd3a32dc8d6938f6def71940a5))
+-   **anonymizer:** [FIX & TESTS] cleanTags : check if param is undefined. Add 3 test ([#308](https://github.com/dcmjs-org/dcmjs/issues/308)) ([44d23d6](https://github.com/dcmjs-org/dcmjs/commit/44d23d6a9e347fcf049053129d4d7323a9258b71))
+-   ArrowAnnotateTool adapter in Cornerstone3D parsing label ([#270](https://github.com/dcmjs-org/dcmjs/issues/270)) ([cb84979](https://github.com/dcmjs-org/dcmjs/commit/cb84979be6eef8835cc7ced006625751a04356aa))
+-   avoid using replaceAll() which isn't available in Node.js 14 ([#296](https://github.com/dcmjs-org/dcmjs/issues/296)) ([7aac3ab](https://github.com/dcmjs-org/dcmjs/commit/7aac3ab05fdedfe1a7a159097690bec00c0bcd2b))
+-   bug tolerance parameter was not propagated ([#241](https://github.com/dcmjs-org/dcmjs/issues/241)) ([c2ed627](https://github.com/dcmjs-org/dcmjs/commit/c2ed6275ccb80fbbab3c0f9c67893d6b681b0bab))
+-   checking the length before writing a DS and using exponential if ([#176](https://github.com/dcmjs-org/dcmjs/issues/176)) ([601aa9e](https://github.com/dcmjs-org/dcmjs/commit/601aa9e8a6df26876b08da739451e538d46aa37b))
+-   **coding-scheme:** Fix coding scheme for updated standard ([ae3f0b5](https://github.com/dcmjs-org/dcmjs/commit/ae3f0b5bcd398a4230c8fba2954e225fda97cc2f))
+-   **cornerstone:** exceptions caused by undefined cached stats in adapters. Safe programming fix only ([#301](https://github.com/dcmjs-org/dcmjs/issues/301)) ([893be43](https://github.com/dcmjs-org/dcmjs/commit/893be433af05f11a03cfce0a572b448303b9334b))
+-   **cs:** [#318](https://github.com/dcmjs-org/dcmjs/issues/318) - check instance's NumberOfFrames property to see if it is a multi-frame file or not ([#320](https://github.com/dcmjs-org/dcmjs/issues/320)) ([0b030a4](https://github.com/dcmjs-org/dcmjs/commit/0b030a45dd48f22a61a90dfe5bbb5848425960ca))
+-   **cs:** Resolves [#316](https://github.com/dcmjs-org/dcmjs/issues/316) Cornerstone3D adaptor - Multiframe support - add "frameNumber" to the Annotation.data ([#317](https://github.com/dcmjs-org/dcmjs/issues/317)) ([5fe862e](https://github.com/dcmjs-org/dcmjs/commit/5fe862e22653d30bfc78e5be5de3669610887727))
+-   **dcmjs:** Add a set of accessors to the sequence list so the API is more consistent ([#224](https://github.com/dcmjs-org/dcmjs/issues/224)) ([9dad6c5](https://github.com/dcmjs-org/dcmjs/commit/9dad6c549cb4dd5c351caa13386998cbe48a1ba6))
+-   **DicomMessage:** Fix readFile after options were added ([c2b62a1](https://github.com/dcmjs-org/dcmjs/commit/c2b62a13b3afc78516f39b906ca7576537037c20))
+-   **encoding:** encapsulation is applied for only PixelData ([#199](https://github.com/dcmjs-org/dcmjs/issues/199)) ([ede2950](https://github.com/dcmjs-org/dcmjs/commit/ede2950d530fb189bb5817db6b5285e2be74ffee)), closes [#194](https://github.com/dcmjs-org/dcmjs/issues/194)
+-   Ensure DS and IS Value Representations are returned as arrays ([#83](https://github.com/dcmjs-org/dcmjs/issues/83)) ([a264661](https://github.com/dcmjs-org/dcmjs/commit/a264661d5a0a899b761c58492955f6d18cc03a4d))
+-   exception writing NaN and Infinity values of FD tags ([#325](https://github.com/dcmjs-org/dcmjs/issues/325)) ([e86daaa](https://github.com/dcmjs-org/dcmjs/commit/e86daaad4c47e7ec2c135b94f0b0de622de69310))
+-   Export loglevelnext logger as dcmjs.log for configuration ([#156](https://github.com/dcmjs-org/dcmjs/issues/156)) ([33515e5](https://github.com/dcmjs-org/dcmjs/commit/33515e5fe3f581d71278674860834ee1ea932faa))
+-   Fix UN & AT VR processing logic ([#167](https://github.com/dcmjs-org/dcmjs/issues/167)) ([#168](https://github.com/dcmjs-org/dcmjs/issues/168)) ([7cb975a](https://github.com/dcmjs-org/dcmjs/commit/7cb975af106d2e3e943881a7dac06f1fe391809c))
+-   force a release for commit caaac4b ([#240](https://github.com/dcmjs-org/dcmjs/issues/240)) ([f53b630](https://github.com/dcmjs-org/dcmjs/commit/f53b6306ce138c5ad3106015c4751b63fbcca362))
+-   **fragment:** Refactor and fragment bug ([#283](https://github.com/dcmjs-org/dcmjs/issues/283)) ([307d60a](https://github.com/dcmjs-org/dcmjs/commit/307d60a6ffecf7d96bc729a37a45775c6b6e189c)), closes [#282](https://github.com/dcmjs-org/dcmjs/issues/282)
+-   **fragment:** write padding to even length on final fragments of encapsulated frame data ([#294](https://github.com/dcmjs-org/dcmjs/issues/294)) ([34b7561](https://github.com/dcmjs-org/dcmjs/commit/34b7561fa48870a87b948eb427d4e32808b4d40e)), closes [#293](https://github.com/dcmjs-org/dcmjs/issues/293)
+-   **idc-02252:** typo + release ([#180](https://github.com/dcmjs-org/dcmjs/issues/180)) ([3f5cb24](https://github.com/dcmjs-org/dcmjs/commit/3f5cb24fd0e50668d36dc21390a1ff527505a8db))
+-   **image-comments:** Move ImageComments to DerivedPixels ([da11200](https://github.com/dcmjs-org/dcmjs/commit/da112001e3c1c01b30acbd634fd9b2f46a9d3a63))
+-   **import:** missing import for addAccessors ([#295](https://github.com/dcmjs-org/dcmjs/issues/295)) ([6b631b6](https://github.com/dcmjs-org/dcmjs/commit/6b631b6c8bdb2a7a70637308c9ebfe849fe9ccaf))
+-   infinite loop on dcm with no meta length ([#331](https://github.com/dcmjs-org/dcmjs/issues/331)) ([51b156b](https://github.com/dcmjs-org/dcmjs/commit/51b156bf1278fc0f9476de70c89697576c0f4b55))
+-   Invalid VR of the private creator tag of the "Implicit VR Endian" typed DICOM file ([#242](https://github.com/dcmjs-org/dcmjs/issues/242)) ([#243](https://github.com/dcmjs-org/dcmjs/issues/243)) ([6d0552f](https://github.com/dcmjs-org/dcmjs/commit/6d0552fb96c59dcf3e39b3306a50004b24128330))
+-   issues in binary tag parsing ([#276](https://github.com/dcmjs-org/dcmjs/issues/276)) ([60c3af1](https://github.com/dcmjs-org/dcmjs/commit/60c3af1654b8f64baea1cd47f1049fd16ea2fee8))
+-   **measurement-report:** Fix issues with Measurement Report for Bidirectional measurements ([25cf222](https://github.com/dcmjs-org/dcmjs/commit/25cf222e9d80bbe5b68854362383ac4fcaec7f6c))
+-   **measurement-report:** Fix ReferencedFrameNumber usage in MeasurementReport ([b80cd2a](https://github.com/dcmjs-org/dcmjs/commit/b80cd2af070d0280295e88ee24d7e4d43c4af861))
+-   **naturalize:** revert single element sequence ([#223](https://github.com/dcmjs-org/dcmjs/issues/223)) ([0743ed3](https://github.com/dcmjs-org/dcmjs/commit/0743ed34f657b622d4868fe5db37015ad1aa7850))
+-   **naturalizing:** Fix the exception on naturalize twice ([#237](https://github.com/dcmjs-org/dcmjs/issues/237)) ([abced98](https://github.com/dcmjs-org/dcmjs/commit/abced980dccbabce7c4b159600f89c25ba747076))
+-   **parsing:** can't read an encapsulated frame whose size is greater than fragment size ([#205](https://github.com/dcmjs-org/dcmjs/issues/205)) ([176875d](https://github.com/dcmjs-org/dcmjs/commit/176875d0c9c34704302512d2c27103db205b1c8f)), closes [#204](https://github.com/dcmjs-org/dcmjs/issues/204)
+-   Re IDC [#2761](https://github.com/dcmjs-org/dcmjs/issues/2761) fix loading of segmentations ([#258](https://github.com/dcmjs-org/dcmjs/issues/258)) ([ceaf09a](https://github.com/dcmjs-org/dcmjs/commit/ceaf09af74f5727205e5d5869c97114b2c283ae5))
+-   **Segmentation_4X:** Update tag name in getSegmentIndex method for segs ([#183](https://github.com/dcmjs-org/dcmjs/issues/183)) ([1e96ee3](https://github.com/dcmjs-org/dcmjs/commit/1e96ee3ce3280900d56f1887da81471f9b128d30))
+-   **seg:** Use ReferencedSegmentNumber in shared fg ([#166](https://github.com/dcmjs-org/dcmjs/issues/166)) ([0ed3347](https://github.com/dcmjs-org/dcmjs/commit/0ed33477bb1c13b05d682c342edaf0a901fe0f7a))
+-   several issues with character set handling ([#299](https://github.com/dcmjs-org/dcmjs/issues/299)) ([8e22107](https://github.com/dcmjs-org/dcmjs/commit/8e221074179b6d33b82ab5c6f1ae4c06c5522d6b))
+-   **tests:** unified test data loading ([#292](https://github.com/dcmjs-org/dcmjs/issues/292)) ([c34f398](https://github.com/dcmjs-org/dcmjs/commit/c34f39813755227b79f7a0958a81a5e5c0935b73))
+-   **update jsdocs, cut release:** release ([#203](https://github.com/dcmjs-org/dcmjs/issues/203)) ([307974c](https://github.com/dcmjs-org/dcmjs/commit/307974cb399d07152e0f6d4dd9f40fe1c17f076e))
+-   update readme to trigger release ([#257](https://github.com/dcmjs-org/dcmjs/issues/257)) ([554f50d](https://github.com/dcmjs-org/dcmjs/commit/554f50d838fbcbeed25460c7384e14dc46bebb11))
+-   update variable name for frame index ([#332](https://github.com/dcmjs-org/dcmjs/issues/332)) ([5515d6e](https://github.com/dcmjs-org/dcmjs/commit/5515d6e0abe11dee04f9b75272d3fbb5d00b2bd7))
+-   use metadataProvider option instead of cornerstone.metaData ([#280](https://github.com/dcmjs-org/dcmjs/issues/280)) ([3a0e484](https://github.com/dcmjs-org/dcmjs/commit/3a0e484d203770cd309e2bd9f78946a733e79d0c))
+-   **utilities:** Export Bidirectional and Polyline inside TID300 ([75e0e29](https://github.com/dcmjs-org/dcmjs/commit/75e0e29f771843a80bfa32532d2186a4e7cdbd57))
+-   **VR:** added support for specific character set ([#291](https://github.com/dcmjs-org/dcmjs/issues/291)) ([f103d19](https://github.com/dcmjs-org/dcmjs/commit/f103d1918d02780c4881db5c8aa30f653c4da6b6))
+-   **vr:** Convert empty DecimalString and NumberString to null instead of to zero ([#278](https://github.com/dcmjs-org/dcmjs/issues/278)) ([43cd8ea](https://github.com/dcmjs-org/dcmjs/commit/43cd8eaa316a08ff1a025b1267fedda239526acb))
+-   **writeBytes:** create release from commit ([d9a4105](https://github.com/dcmjs-org/dcmjs/commit/d9a41050e756f9b7e56ef4ae3d5000ce86ea39eb))
+
+### Features
+
+-   **adapters:** Add adapter for exporting polylines from dicom-microscopy-viewer to DICOM-SR ([#44](https://github.com/dcmjs-org/dcmjs/issues/44)) ([7a1947c](https://github.com/dcmjs-org/dcmjs/commit/7a1947c6ec164da4e9f66e90c1bbf1055978b173))
+-   **adapters:** Add adapter to generate segments & geometry from SEG for easier use in VTKjs (migrated from vtkDisplay example) ([398b74d](https://github.com/dcmjs-org/dcmjs/commit/398b74d70deb32824a74e98210127326887dfa77))
+-   **adapters:** First steps for DICOM-SR read support for polylines with dicom-microscopy-viewer ([#49](https://github.com/dcmjs-org/dcmjs/issues/49)) ([37f1888](https://github.com/dcmjs-org/dcmjs/commit/37f18881dd7369818de4aa22c5730012c2829616))
+-   Add Cornerstone3D adapter for Length tool ([#261](https://github.com/dcmjs-org/dcmjs/issues/261)) ([2cab0d9](https://github.com/dcmjs-org/dcmjs/commit/2cab0d9edba20e99b11407d41ed2a4bf60a6ab9b))
+-   Add overlapping segment check to Cornerstone 4.x DICOM SEG adapter ([#155](https://github.com/dcmjs-org/dcmjs/issues/155)) ([df44e27](https://github.com/dcmjs-org/dcmjs/commit/df44e27b3b1c26082bf3d7a9477ab7f0d5ca1d19))
+-   Allow backslashes in UIDs in order to support DICOM Q&R ([#277](https://github.com/dcmjs-org/dcmjs/issues/277)) ([6d2d5c6](https://github.com/dcmjs-org/dcmjs/commit/6d2d5c60f500174abb1be7757094178ec6a1d144))
+-   **anonymizer:** export Array tagNamesToEmpty and modify cleanTags ([#303](https://github.com/dcmjs-org/dcmjs/issues/303)) ([e960085](https://github.com/dcmjs-org/dcmjs/commit/e960085ca08fb28a0a8134fbfee7d450722d8c64))
+-   Bidirectional Arrow and EllipticalROI adapters for CS3D ([#264](https://github.com/dcmjs-org/dcmjs/issues/264)) ([1fc7932](https://github.com/dcmjs-org/dcmjs/commit/1fc7932e3eed85fa1a0f857d84bab35a2e62d80d))
+-   **cornerstone:** Feature add cornerstone adapters ([#225](https://github.com/dcmjs-org/dcmjs/issues/225)) ([23c0877](https://github.com/dcmjs-org/dcmjs/commit/23c08777f7a93d4c0576a5e583113029a1a1e05f))
+-   **deflated:** Added support for reading datasets with deflated transfer syntax ([#312](https://github.com/dcmjs-org/dcmjs/issues/312)) ([ee8f8f2](https://github.com/dcmjs-org/dcmjs/commit/ee8f8f21babbbd8eac2b19e8e957db2cc5a09325))
+-   **mem:** Zero Copy ArrayBuffer ([#279](https://github.com/dcmjs-org/dcmjs/issues/279)) ([a17f2d7](https://github.com/dcmjs-org/dcmjs/commit/a17f2d75bc102cc789289f0eae51e5b416ce1567))
+-   Move adapters from dcmjs for Cornerstone/3d and VTK ([b136a21](https://github.com/dcmjs-org/dcmjs/commit/b136a21fb96bb28c3a10a63b6b78083b897f4e19))
+-   **npm:** bump minor version (minor readme edits) ([b48f665](https://github.com/dcmjs-org/dcmjs/commit/b48f665893f5e4b643c68ddc2fc3b13c641b6b29))
+-   **readme:** stress need for a PR for npm package ([#310](https://github.com/dcmjs-org/dcmjs/issues/310)) ([dafd78d](https://github.com/dcmjs-org/dcmjs/commit/dafd78d004ccb9d0b505f0b7e0fd461eda9c3710))
+-   **sr:** export TID300 - Point class ([#323](https://github.com/dcmjs-org/dcmjs/issues/323)) ([d2aebc3](https://github.com/dcmjs-org/dcmjs/commit/d2aebc3166c23e14dce4d7a8b7f1e2fc933f6328))
+-   **structured-reports:** Add initial work on Adapters / Utilities for Imaging Measurement Structured Report input / output ([#17](https://github.com/dcmjs-org/dcmjs/issues/17)) ([941ad75](https://github.com/dcmjs-org/dcmjs/commit/941ad75320eece3368104d08247fdc371497c7cd))
+-   **testing:** Use the Jest testing framework and switch to GitHub Actions ([#254](https://github.com/dcmjs-org/dcmjs/issues/254)) ([a91ff2b](https://github.com/dcmjs-org/dcmjs/commit/a91ff2babd2c6a44f20ecbd954ab38901276cf41))

package/License.txt

@@ -0,0 +1,22 @@
+
+The MIT License (MIT)
+
+Copyright (c) 2017 Steve Pieper
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

package/README.md

@@ -0,0 +1,33 @@
+<div align="center">
+  <h1>Adapters for VTK, Cornerstone and Cornerstone3D</h1>
+  <p>Conversion to/from the internal model and DICOM SR for annotations and other
+  types of objects.</p>
+</div>
+
+<hr />
+
+# History
+
+- 2014
+  - [DCMTK](dcmtk.org) cross compiled to javascript at [CTK Hackfest](http://www.commontk.org/index.php/CTK-Hackfest-May-2014). While this was useful and powerful, it was heavyweight for typical web usage.
+- 2016
+  - A [Medical Imaging Web Appliction meeting at Stanford](http://qiicr.org/web/outreach/Medical-Imaging-Web-Apps/) and [follow-on hackfest in Boston](http://qiicr.org/web/outreach/MIWS-hackfest/) helped elaborate the needs for manipulating DICOM in pure Javascript.
+  - Based on [DICOM Part 10 read/write code](https://github.com/OHIF/dicom-dimse) initiated by Weiwei Wu of [OHIF](http://ohif.org), Steve Pieper [developed further features](https://github.com/pieper/sites/tree/gh-pages/dcmio) and [examples of creating multiframe and segmentation objects](https://github.com/pieper/sites/tree/gh-pages/DICOMzero) discussed with the community at RSNA
+- 2017
+  - At [NA-MIC Project Week 25](https://na-mic.org/wiki/Project_Week_25) Erik Ziegler and Steve Pieper [worked](https://na-mic.org/wiki/Project_Week_25/DICOM_Segmentation_Support_for_Cornerstone_and_OHIF_Viewer)
+    with the community to define some example use cases to mix the pure JavaScript DICOM code with Cornerstone and [CornerstoneTools](https://github.com/chafey/cornerstoneTools).
+- 2018-2022
+  - Work continues to develop SR and SEG support to [OHIFViewer](http://ohif.org) allow interoperability with [DICOM4QI](https://legacy.gitbook.com/book/qiicr/dicom4qi/details)
+- 2023
+  - Moved the adapters into cornerstone3D from dcmjsj
+
+# Support
+
+The developers gratefully acknowledge their research support:
+
+- Open Health Imaging Foundation ([OHIF](http://ohif.org))
+- Quantitative Image Informatics for Cancer Research ([QIICR](http://qiicr.org))
+- [Radiomics](http://radiomics.io)
+- The [Neuroimage Analysis Center](http://nac.spl.harvard.edu)
+- The [National Center for Image Guided Therapy](http://ncigt.org)
+- The [NCI Imaging Data Commons](https://imagingdatacommons.github.io/) NCI Imaging Data Commons: contract number 19X037Q from Leidos Biomedical Research under Task Order HHSN26100071 from NCI

package/generate-dictionary.js

@@ -0,0 +1,145 @@
+/**
+ * Create the dictionary.js DICOM dictionary file from the Standard.
+ * Reformat The DICOM dictionary PS3.6 and PS3.7 docbook XML files (from e.g. standard docs) to JavaScript syntax.
+ * Based on https://github.com/pydicom/pydicom/blob/8112bb69bfc0423c3a08cb89e7960defbe7237bf/source/generate_dict/generate_dicom_dict.py
+ */
+const fs = require('fs/promises');
+const http = require('http');
+const xml2js = require('xml2js');
+
+require('@babel/register');
+const DICTIONARY_PATH = './src/dictionary.js';
+const dictionary = require(DICTIONARY_PATH).default;
+const { Tag } = require('./src/Tag');
+
+async function main() {
+  const tags = [];
+
+  /**
+   * Collect DICOM tags from XML documents
+   */
+  const part06 = await getDocbook('part06/part06.xml');
+  const part06Rows = part06.book.chapter.find(chapter => chapter.$['xml:id'] === 'chapter_6').table[0].tbody[0].tr;
+  tags.push(...part06Rows.map(row => {
+    const retired = getCellData(row.td[5])?.startsWith('RET');
+    const name = getCellData(row.td[2]);
+    return {
+      tag: getCellData(row.td[0]),
+      vr: getCellData(row.td[3]),
+      name: retired ? `RETIRED_${name}` : name,
+      vm: getCellData(row.td[4]),
+      version: retired ? 'DICOM/retired' : 'DICOM',
+    }
+  }));
+
+  const part07 = await getDocbook('part07/part07.xml');
+  const chapterE = part07.book.chapter.find(chapter => chapter.$['xml:id'] === 'chapter_E');
+  const commandFields = chapterE.section[0].table[0].tbody[0].tr;
+  tags.push(...commandFields.map(row => {
+    return {
+      tag: getCellData(row.td[0]),
+      vr: getCellData(row.td[3]),
+      name: getCellData(row.td[2]),
+      vm: getCellData(row.td[4]),
+      version: 'DICOM',
+    }
+  }));
+  const retiredCommandFields = chapterE.section[1].table[0].tbody[0].tr;
+  tags.push(...retiredCommandFields.map(row => {
+    return {
+      tag: getCellData(row.td[0]),
+      vr: getCellData(row.td[3]),
+      name: `RETIRED_${getCellData(row.td[2])}`,
+      vm: getCellData(row.td[4]),
+      version: 'DICOM/retired',
+    }
+  }));
+
+  const newTags = tags.filter(tag => tag.vr && tag.name && tag.vm)
+    .filter(tag => !(tag.tag in dictionary)) // filter already defined
+    .filter(tag => !/[(,\dA-F]x+[A-F\d,)]/.test(tag.tag)); // filter repeater tags
+
+  /**
+   * Insert new tags into dictionary, ordered among tags with the same version
+   */
+  const dictionaryArray = Object.values(dictionary);
+  for (const newTag of newTags) {
+    const parsedTag = Tag.fromPString(newTag.tag);
+    const insertIndex = dictionaryArray.findIndex(tag => {
+      if (tag.version !== newTag.version) {
+        return false;
+      }
+      const thisTag = Tag.fromPString(tag.tag);
+      return thisTag.toCleanString() > parsedTag.toCleanString();
+    });
+    dictionaryArray.splice(insertIndex, 0, newTag);
+  }
+
+  await writeDictionary(dictionaryArray);
+}
+
+async function writeDictionary(tags) {
+  let data = 'const dictionary = {';
+  for (const tag of tags) {
+    if (!tag.tag) {
+      data += `
+    "": {
+        tag: ""
+    },`
+      continue;
+    }
+    const tagKey = tag.tag.includes('"') ? `'${tag.tag}'` : `"${tag.tag}"`;
+    data += `
+    ${tagKey}: {
+        tag: ${tagKey},
+        vr: "${tag.vr}",
+        name: "${tag.name}",
+        vm: "${tag.vm}",
+        version: "${tag.version ?? 'PrivateTag'}"
+    },`;
+  }
+  data += `
+};
+
+export default dictionary;
+`;
+
+  await fs.writeFile(DICTIONARY_PATH, data);
+}
+
+async function getDocbook(part) {
+  const source = await getUrl(`http://dicom.nema.org/medical/dicom/current/source/docbook/${part}`);
+  return xml2js.parseStringPromise(source);
+}
+
+function getCellData(td) {
+  const para = td.para?.[0];
+  if (!para) {
+    return undefined;
+  }
+  const text = para.emphasis ? para.emphasis[0]._ : para._;
+  return text?.trim().replace(/[\u200b\uffff]/g, '');
+}
+
+function getUrl(url) {
+  return new Promise((resolve, reject) => {
+    http.get(url, request => {
+      let data = '';
+      request.on('error', () => {
+        reject(error);
+      });
+      request.on('end', () => {
+        resolve(data);
+      });
+      request.on('data', chunk => {
+        data += chunk;
+      });
+    });
+  });
+}
+
+if (require.main === module) {
+  main().catch(error => {
+    console.log(error);
+  });
+}

package/netlify.toml

@@ -0,0 +1,20 @@
+# Netlify Config
+#
+# TOML Reference:
+# https://www.netlify.com/docs/netlify-toml-reference/
+
+# Settings in the [build] context are global and are applied to all contexts
+# unless otherwise overridden by more specific contexts.
+[build]
+  # Directory to change to before starting a build.
+  # This is where we will look for package.json/.nvmrc/etc.
+  base = ""
+  publish = "examples/"
+  command = "npm run build:examples"
+
+# Deploy Preview context: all deploys generated from a pull/merge request will
+# inherit these settings.
+[context.deploy-preview]
+  base = ""
+  publish = "examples/"
+  command = "npm run build:examples"

package/package.json

@@ -0,0 +1,65 @@
+{
+    "name": "@cornerstonejs/adapters",
+    "version": "0.1.2",
+    "description": "Adapters for Cornerstone3D to/from formats including DICOM SR and others",
+    "src": "src/index.js",
+    "main": "build/adapters.js",
+    "module": "build/adapters.es.js",
+    "directories": {
+        "example": "examples"
+    },
+    "publishConfig": {
+        "access": "public"
+    },
+    "scripts": {
+        "test": "jest --testTimeout 60000",
+        "build": "rollup -c",
+        "build:examples": "npm run build && npx cpx 'build/**/*.{js,map}' examples/js",
+        "start": "rollup -c -w",
+        "format": "prettier --write 'src/**/*.js' 'test/**/*.js'",
+        "lint": "eslint --fix ."
+    },
+    "repository": {
+        "type": "git",
+        "url": "git+https://github.com/dcmjs-org/dcmjs.git"
+    },
+    "author": "@cornerstonejs (formerly Steve Pieper from dcmjs)",
+    "license": "MIT",
+    "bugs": {
+        "url": "https://github.com/cornerstonejs/cornerstone3D-beta/issues"
+    },
+    "homepage": "https://github.com/cornerstonejs/cornerstone3D-beta/blob/main/packages/adapters/README.md",
+    "devDependencies": {
+        "@babel/core": "^7.16.12",
+        "@babel/preset-env": "^7.16.11",
+        "@babel/register": "^7.13.0",
+        "acorn": "^7.1.0",
+        "acorn-jsx": "^5.2.0",
+        "eslint": "^8.17.0",
+        "eslint-config-prettier": "^8.5.0",
+        "follow-redirects": "^1.10.0",
+        "husky": "^1.3.1",
+        "jest": "^27.5.1",
+        "lint-staged": "^8.2.1",
+        "prettier": "^2.6.2",
+        "rollup": "^1.31.1",
+        "rollup-plugin-babel": "^4.3.3",
+        "rollup-plugin-commonjs": "^9.3.4",
+        "rollup-plugin-json": "^3.1.0",
+        "rollup-plugin-node-builtins": "^2.1.2",
+        "rollup-plugin-node-globals": "^1.4.0",
+        "rollup-plugin-node-resolve": "^4.2.4",
+        "unzipper": "^0.10.9",
+        "xml2js": "^0.4.23"
+    },
+    "dependencies": {
+        "@babel/runtime-corejs2": "^7.17.8",
+        "dcmjs": "^0.29.4",
+        "gl-matrix": "^3.4.3",
+        "lodash.clonedeep": "^4.5.0",
+        "loglevelnext": "^3.0.1",
+        "ndarray": "^1.0.19",
+        "pako": "^2.0.4"
+    },
+    "gitHead": "61375822b22da7b8e81e521043b06ed32cf42a69"
+}

package/rollup.config.js

@@ -0,0 +1,37 @@
+import babel from "rollup-plugin-babel";
+import resolve from "rollup-plugin-node-resolve";
+import globals from "rollup-plugin-node-globals";
+import builtins from "rollup-plugin-node-builtins";
+import commonjs from "rollup-plugin-commonjs";
+import json from "rollup-plugin-json";
+import pkg from "./package.json";
+
+export default {
+  input: pkg.src,
+  output: [
+    {
+      file: pkg.main,
+      format: "umd",
+      name: pkg.name,
+      sourcemap: true
+    },
+    {
+      file: pkg.module,
+      format: "es",
+      sourcemap: true
+    }
+  ],
+  plugins: [
+    resolve({
+      browser: true
+    }),
+    commonjs(),
+    globals(),
+    builtins(),
+    babel({
+      runtimeHelpers: true,
+      exclude: "node_modules/**"
+    }),
+    json()
+  ]
+};

package/test/adapters.test.js

@@ -0,0 +1 @@
+it("No tests yet", () => {});