@comfanion/workflow 4.36.2 → 4.36.3

package/bin/cli.js

@@ -576,6 +576,12 @@ program
       spinner.text = 'Restoring config.yaml...';
       let mergedConfig = configBackup;
       
+      // Extract user's custom exclude patterns before merge
+      const userExcludeMatch = configBackup.match(/exclude:\s*\n((?:\s+-\s+.+\n?)+)/);
+      const userExcludes = userExcludeMatch 
+        ? userExcludeMatch[1].match(/-\s+(.+)/g)?.map(m => m.replace(/^-\s+/, '').trim()) || []
+        : [];
+      
       // Add vectorizer section if missing
       if (!mergedConfig.includes('vectorizer:')) {
         const newConfigPath = path.join(targetDir, 'config.yaml');
@@ -593,6 +599,30 @@ program
         }
       }
       
+      // Merge user's custom excludes into vectorizer section
+      if (userExcludes.length > 0) {
+        const newConfigPath = path.join(targetDir, 'config.yaml');
+        const newConfig = await fs.readFile(newConfigPath, 'utf8');
+        const defaultExcludeMatch = newConfig.match(/exclude:\s*\n((?:\s+-\s+.+\n?)+)/);
+        const defaultExcludes = defaultExcludeMatch
+          ? defaultExcludeMatch[1].match(/-\s+(.+)/g)?.map(m => m.replace(/^-\s+/, '').trim()) || []
+          : [];
+        
+        // Find excludes that user added (not in defaults)
+        const customExcludes = userExcludes.filter(e => !defaultExcludes.includes(e));
+        
+        if (customExcludes.length > 0) {
+          // Add custom excludes to the merged config
+          const excludeInsertPoint = mergedConfig.match(/exclude:\s*\n((?:\s+-\s+.+\n?)+)/);
+          if (excludeInsertPoint) {
+            const insertAfter = excludeInsertPoint.index + excludeInsertPoint[0].length;
+            const customLines = customExcludes.map(e => `    - ${e}`).join('\n') + '\n';
+            mergedConfig = mergedConfig.slice(0, insertAfter) + customLines + mergedConfig.slice(insertAfter);
+            console.log(chalk.green(`  ✅ Preserved ${customExcludes.length} custom exclude patterns`));
+          }
+        }
+      }
+      
       await fs.writeFile(configPath, mergedConfig);
       
       // Install plugin dependencies

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@comfanion/workflow",
-  "version": "4.36.2",
+  "version": "4.36.3",
   "description": "Initialize OpenCode Workflow system for AI-assisted development with semantic code search",
   "type": "module",
   "bin": {

package/src/build-info.json

@@ -1,6 +1,6 @@
 {
   "version": "3.0.0",
-  "buildDate": "2026-01-24T14:53:32.419Z",
+  "buildDate": "2026-01-24T14:58:40.429Z",
   "files": [
     "config.yaml",
     "FLOW.yaml",