@cogitator-ai/self-modifying 19.3.8 → 19.4.1

package/README.md

@@ -45,13 +45,15 @@ A provider prefix that matches the backend (`ollama/` for `OllamaBackend`) is st
 
 ### Agent Options
 
-| Option                    | Description                                                                                       |
-| ------------------------- | ------------------------------------------------------------------------------------------------- |
-| `agent`                   | The agent to run (model, instructions, tools, `temperature`, `maxTokens`, `maxIterations`)        |
-| `llm`                     | LLM backend used for the agent and for every self-modification step                               |
-| `config`                  | Partial `SelfModifyingConfig`; `enabled: false` turns the wrapper into a plain tool-calling agent |
-| `modificationConstraints` | Extra safety / capability / resource / custom constraints merged with the defaults                |
-| `availableModels`         | Models architecture evolution may switch to; without it the model is never changed                |
+| Option                    | Description                                                                                        |
+| ------------------------- | -------------------------------------------------------------------------------------------------- |
+| `agent`                   | The agent to run (model, instructions, tools, `temperature`, `maxTokens`, `maxIterations`)         |
+| `llm`                     | LLM backend used for the agent and for every self-modification step                                |
+| `config`                  | Partial `SelfModifyingConfig`, `enabled: false` turns the wrapper into a plain tool-calling agent  |
+| `modificationConstraints` | Extra safety / capability / resource / custom constraints merged with the defaults                 |
+| `availableModels`         | Models architecture evolution may switch to, without it the model is never changed                 |
+| `toolInvoker`             | Runs tool calls like a Cogitator run (approval, guardrails, sandbox, timeout), e.g. your Cogitator |
+| `onApproval`              | Decides tool calls that need approval, a call nobody approves is refused                           |
 
 `config.maxInternalTokens` bounds the output tokens of every internal LLM call (gap analysis, tool generation and review, architecture evolution). Unset leaves the backend default. It keeps reasoning models from spending minutes on those steps. Meta-reasoning has its own bound, `metaReasoning.maxMetaTokens`. Used on their own, `GapAnalyzer`, `ToolGenerator`, `ToolValidator`, `CapabilityAnalyzer` and `ParameterOptimizer` take the same bound as `maxTokens`.
 
@@ -59,7 +61,7 @@ A provider prefix that matches the backend (`ollama/` for `OllamaBackend`) is st
 
 - Runs are serialized: concurrent `run()` calls on one instance execute one after another.
 - The agent's own `temperature` and `maxTokens` form the baseline configuration.
-- Tool calls are validated against each tool's Zod schema before execution; `toolStrategy: 'parallel'` (or `'adaptive'` with distinct tools) runs them concurrently.
+- Tool calls run through `toolInvoker` (default: a Cogitator of the agent's own, released by `close()`), so arguments are validated against the tool's Zod or JSON schema, `requiresApproval` is asked through `onApproval` (else the invoker's `guardrails.onToolApproval`, else the call is refused, since a self-modifying run cannot pause), the guardrails apply, sandboxed tools run in the sandbox and `tool.timeout` holds. `toolStrategy: 'parallel'` (or `'adaptive'` with distinct tools) runs them concurrently.
 - `reflectionDepth > 0` adds self-review passes over the final answer.
 - A step is complete when the model returns a non-empty answer that was not truncated. Meta-reasoning only intervenes (and the step is retried, up to `maxAdaptations` times) when a step is incomplete.
 

package/dist/self-modifying-agent.d.ts

@@ -1,4 +1,4 @@
-import type { Agent, Tool, LLMBackend, ToolSelfGenerationConfig, ToolSandboxConfig, ArchitectureEvolutionConfig, ModificationConstraintsConfig, ModificationConstraints, ArchitectureConfig, GeneratedTool, MetaObservation, MetaAssessment, MetaAdaptation, ModificationCheckpoint, AppliedModification, SelfModifyingEvent, SelfModifyingEventType, CapabilityGap, EvolutionMetrics, ReasoningMode } from '@cogitator-ai/types';
+import type { Agent, Tool, LLMBackend, ToolSelfGenerationConfig, ToolSandboxConfig, ArchitectureEvolutionConfig, ModificationConstraintsConfig, ModificationConstraints, ArchitectureConfig, GeneratedTool, MetaObservation, MetaAssessment, MetaAdaptation, ModificationCheckpoint, AppliedModification, SelfModifyingEvent, SelfModifyingEventType, CapabilityGap, EvolutionMetrics, ReasoningMode, ToolInvocationOptions, ToolInvoker } from '@cogitator-ai/types';
 import { type MetaReasoningOverrides } from './meta-reasoning/index.js';
 export interface SelfModifyingAgentConfig {
     enabled?: boolean;
@@ -23,6 +23,20 @@ export interface SelfModifyingAgentOptions {
     modificationConstraints?: Partial<ModificationConstraints>;
     /** Models architecture evolution may switch to. Model changes are never proposed when empty. */
     availableModels?: string[];
+    /**
+     * Runs the agent's tool calls the way a Cogitator run does: arguments validated against the
+     * tool's schema (Zod or JSON Schema), approval asked for calls that need it, the guardrails
+     * applied, sandboxed tools run in the sandbox and `tool.timeout` kept. Pass the `Cogitator`
+     * whose sandbox and guardrails should apply. Default: a Cogitator of its own without
+     * configuration, released by `close()`.
+     */
+    toolInvoker?: ToolInvoker;
+    /**
+     * Decides tool calls that need approval (`requiresApproval`), like `RunOptions.onApproval`.
+     * Without it the invoker's `guardrails.onToolApproval` decides. A self-modifying run cannot
+     * pause, so a call nobody approves is refused and the model is told why.
+     */
+    onApproval?: ToolInvocationOptions['onApproval'];
 }
 export interface SelfModifyingEventDataMap {
     run_started: {
@@ -102,6 +116,9 @@ export declare class SelfModifyingAgent {
     private readonly rollbackManager;
     private currentContext;
     private runQueue;
+    private readonly toolInvoker?;
+    private ownInvoker?;
+    private readonly onApproval?;
     constructor(options: SelfModifyingAgentOptions);
     on<K extends SelfModifyingEventType>(event: K, handler: (event: TypedSelfModifyingEvent<K>) => void): () => void;
     off<K extends SelfModifyingEventType>(event: K, handler: (event: TypedSelfModifyingEvent<K>) => void): void;
@@ -111,6 +128,9 @@ export declare class SelfModifyingAgent {
         adaptationsMade: MetaAdaptation[];
         finalConfig: ArchitectureConfig;
     }>;
+    /** Releases the Cogitator the agent created for tool calls, when no `toolInvoker` was given. */
+    close(): Promise<void>;
+    private invoker;
     generateTool(gap: CapabilityGap): Promise<GeneratedTool | null>;
     recordToolUsage(toolId: string, success: boolean, executionTime: number): Promise<void>;
     getGeneratedTools(): Promise<GeneratedTool[]>;

package/dist/self-modifying-agent.d.ts.map

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+{"version":3,"file":"self-modifying-agent.d.ts","sourceRoot":"","sources":["../src/self-modifying-agent.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EACV,KAAK,EAEL,IAAI,EAGJ,UAAU,EAGV,wBAAwB,EACxB,iBAAiB,EACjB,2BAA2B,EAC3B,6BAA6B,EAC7B,uBAAuB,EACvB,kBAAkB,EAClB,aAAa,EACb,eAAe,EACf,cAAc,EACd,cAAc,EAEd,sBAAsB,EACtB,mBAAmB,EAEnB,kBAAkB,EAClB,sBAAsB,EACtB,aAAa,EACb,gBAAgB,EAChB,aAAa,EAGb,qBAAqB,EACrB,WAAW,EACZ,MAAM,qBAAqB,CAAC;AAK7B,OAAO,EAAmC,KAAK,sBAAsB,EAAE,MAAM,kBAAkB,CAAC;AAUhG,MAAM,WAAW,wBAAwB;IACvC,OAAO,CAAC,EAAE,OAAO,CAAC;IAClB,cAAc,CAAC,EAAE,OAAO,CAAC,IAAI,CAAC,wBAAwB,EAAE,eAAe,CAAC,CAAC,GAAG;QAC1E,aAAa,CAAC,EAAE,OAAO,CAAC,iBAAiB,CAAC,CAAC;KAC5C,CAAC;IACF,aAAa,CAAC,EAAE,sBAAsB,CAAC;IACvC,qBAAqB,CAAC,EAAE,OAAO,CAAC,2BAA2B,CAAC,CAAC;IAC7D,WAAW,CAAC,EAAE,OAAO,CAAC,6BAA6B,CAAC,CAAC;IACrD;;;;OAIG;IACH,iBAAiB,CAAC,EAAE,MAAM,CAAC;CAC5B;AAED,MAAM,WAAW,yBAAyB;IACxC,KAAK,EAAE,KAAK,CAAC;IACb,GAAG,EAAE,UAAU,CAAC;IAChB,MAAM,CAAC,EAAE,wBAAwB,CAAC;IAClC,yFAAyF;IACzF,uBAAuB,CAAC,EAAE,OAAO,CAAC,uBAAuB,CAAC,CAAC;IAC3D,gGAAgG;IAChG,eAAe,CAAC,EAAE,MAAM,EAAE,CAAC;IAC3B;;;;;;OAMG;IACH,WAAW,CAAC,EAAE,WAAW,CAAC;IAC1B;;;;OAIG;IACH,UAAU,CAAC,EAAE,qBAAqB,CAAC,YAAY,CAAC,CAAC;CAClD;AAED,MAAM,WAAW,yBAAyB;IACxC,WAAW,EAAE;QAAE,KAAK,EAAE,MAAM,CAAA;KAAE,CAAC;IAC/B,aAAa,EAAE;QACb,OAAO,EAAE,OAAO,CAAC;QACjB,cAAc,CAAC,EAAE,MAAM,CAAC;QACxB,eAAe,CAAC,EAAE,MAAM,CAAC;QACzB,KAAK,CAAC,EAAE,MAAM,CAAC;KAChB,CAAC;IACF,uBAAuB,EAAE;QAAE,GAAG,EAAE,aAAa,CAAA;KAAE,CAAC;IAChD,yBAAyB,EAAE;QACzB,MAAM,EAAE,MAAM,CAAC;QACf,IAAI,EAAE,MAAM,CAAC;QACb,OAAO,EAAE,OAAO,CAAC;QACjB,UAAU,CAAC,EAAE,MAAM,CAAC;QACpB,KAAK,CAAC,EAAE,MAAM,CAAC;KAChB,CAAC;IACF,eAAe,EAAE;QAAE,WAAW,EAAE,eAAe,CAAC;QAAC,UAAU,EAAE,cAAc,CAAA;KAAE,CAAC;IAC9E,gBAAgB,EAAE;QAAE,YAAY,EAAE,aAAa,CAAC;QAAC,OAAO,EAAE,aAAa,CAAC;QAAC,MAAM,EAAE,MAAM,CAAA;KAAE,CAAC;IAC1F,oBAAoB,EAAE;QACpB,OAAO,EAAE,OAAO,CAAC;QACjB,WAAW,CAAC,EAAE,MAAM,CAAC;QACrB,OAAO,CAAC,EAAE,kBAAkB,CAAC;QAC7B,OAAO,CAAC,EAAE,gBAAgB,CAAC;QAC3B,KAAK,CAAC,EAAE,MAAM,CAAC;KAChB,CAAC;IACF,kBAAkB,EAAE;QAAE,YAAY,EAAE,MAAM,CAAA;KAAE,CAAC;IAC7C,kBAAkB,EAAE;QAAE,YAAY,EAAE,MAAM,CAAC;QAAC,MAAM,EAAE,MAAM,CAAA;KAAE,CAAC;CAC9D;AAED,MAAM,MAAM,uBAAuB,CAAC,CAAC,SAAS,sBAAsB,IAAI,IAAI,CAC1E,kBAAkB,EAClB,MAAM,GAAG,MAAM,CAChB,GAAG;IACF,IAAI,EAAE,CAAC,CAAC;IACR,IAAI,EAAE,yBAAyB,CAAC,CAAC,CAAC,CAAC;CACpC,CAAC;AAEF,MAAM,WAAW,UAAU;IACzB,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,EAAE,MAAM,CAAC;IACd,SAAS,EAAE,MAAM,CAAC;IAClB,KAAK,EAAE,IAAI,EAAE,CAAC;IACd,aAAa,EAAE,kBAAkB,CAAC;IAClC,cAAc,EAAE,aAAa,EAAE,CAAC;IAChC,YAAY,EAAE,eAAe,EAAE,CAAC;IAChC,WAAW,EAAE,cAAc,EAAE,CAAC;IAC9B,WAAW,EAAE,sBAAsB,EAAE,CAAC;IACtC,kBAAkB,EAAE,MAAM,CAAC;IAC3B,oBAAoB,EAAE,mBAAmB,EAAE,CAAC;IAC5C,UAAU,EAAE,MAAM,CAAC;CACpB;AAwCD,qBAAa,kBAAkB;IAC7B,OAAO,CAAC,QAAQ,CAAC,KAAK,CAAQ;IAC9B,OAAO,CAAC,QAAQ,CAAC,GAAG,CAAa;IACjC,OAAO,CAAC,QAAQ,CAAC,SAAS,CAAS;IACnC,OAAO,CAAC,QAAQ,CAAC,MAAM,CAAsB;IAC7C,OAAO,CAAC,QAAQ,CAAC,OAAO,CAAmC;IAC3D,OAAO,CAAC,QAAQ,CAAC,gBAAgB,CAG7B;IAEJ,OAAO,CAAC,QAAQ,CAAC,WAAW,CAAc;IAC1C,OAAO,CAAC,QAAQ,CAAC,aAAa,CAAgB;IAC9C,OAAO,CAAC,QAAQ,CAAC,SAAS,CAA6B;IACvD,OAAO,CAAC,QAAQ,CAAC,YAAY,CAAe;IAC5C,OAAO,CAAC,QAAQ,CAAC,kBAAkB,CAAqB;IACxD,OAAO,CAAC,QAAQ,CAAC,qBAAqB,CAAwB;IAC9D,OAAO,CAAC,QAAQ,CAAC,eAAe,CAAkB;IAElD,OAAO,CAAC,cAAc,CAA2B;IACjD,OAAO,CAAC,QAAQ,CAAuC;IACvD,OAAO,CAAC,QAAQ,CAAC,WAAW,CAAC,CAAc;IAC3C,OAAO,CAAC,UAAU,CAAC,CAAY;IAC/B,OAAO,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAsC;gBAEtD,OAAO,EAAE,yBAAyB;IA4D9C,EAAE,CAAC,CAAC,SAAS,sBAAsB,EACjC,KAAK,EAAE,CAAC,EACR,OAAO,EAAE,CAAC,KAAK,EAAE,uBAAuB,CAAC,CAAC,CAAC,KAAK,IAAI,GACnD,MAAM,IAAI;IAeb,GAAG,CAAC,CAAC,SAAS,sBAAsB,EAClC,KAAK,EAAE,CAAC,EACR,OAAO,EAAE,CAAC,KAAK,EAAE,uBAAuB,CAAC,CAAC,CAAC,KAAK,IAAI,GACnD,IAAI;IAQP,GAAG,CAAC,KAAK,EAAE,MAAM,GAAG,OAAO,CAAC;QAC1B,MAAM,EAAE,MAAM,CAAC;QACf,cAAc,EAAE,aAAa,EAAE,CAAC;QAChC,eAAe,EAAE,cAAc,EAAE,CAAC;QAClC,WAAW,EAAE,kBAAkB,CAAC;KACjC,CAAC;IAMF,gGAAgG;IAC1F,KAAK,IAAI,OAAO,CAAC,IAAI,CAAC;IAM5B,OAAO,CAAC,OAAO;IAMT,YAAY,CAAC,GAAG,EAAE,aAAa,GAAG,OAAO,CAAC,aAAa,GAAG,IAAI,CAAC;IAQ/D,eAAe,CAAC,MAAM,EAAE,MAAM,EAAE,OAAO,EAAE,OAAO,EAAE,aAAa,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;IAS7F,iBAAiB,IAAI,OAAO,CAAC,aAAa,EAAE,CAAC;IAIvC,gBAAgB,IAAI,OAAO,CAAC,sBAAsB,GAAG,IAAI,CAAC;IAyB1D,oBAAoB,CAAC,YAAY,EAAE,MAAM,EAAE,MAAM,SAAoB,GAAG,OAAO,CAAC,OAAO,CAAC;YA6BhF,UAAU;IA4FxB,OAAO,CAAC,IAAI;IAcZ,OAAO,CAAC,4BAA4B;IAUpC,OAAO,CAAC,WAAW;IAwEnB,OAAO,CAAC,aAAa;YAIP,kBAAkB;YAclB,oBAAoB;YAoDpB,yBAAyB;YAoBzB,uBAAuB;YA4BvB,uBAAuB;YAiDvB,kBAAkB;YAyBlB,wBAAwB;IA4FtC,OAAO,CAAC,aAAa;YAsBP,gBAAgB;YAuGhB,gBAAgB;YAwBhB,eAAe;IAgE7B,OAAO,CAAC,gBAAgB;IAYxB,OAAO,CAAC,cAAc;YAQR,oBAAoB;IAelC,OAAO,CAAC,oBAAoB;IAK5B,OAAO,CAAC,kBAAkB;YAUZ,YAAY;CAW3B"}

package/dist/self-modifying-agent.js

@@ -1,10 +1,12 @@
 import { nanoid } from 'nanoid';
+import { Cogitator } from '@cogitator-ai/core';
 import { DEFAULT_META_REASONING_CONFIG } from '@cogitator-ai/types';
 import { SelfModifyingEventEmitter } from './events/index.js';
 import { GapAnalyzer, ToolGenerator, InMemoryGeneratedToolStore } from './tool-generation/index.js';
 import { MetaReasoner, mergeModeProfiles } from './meta-reasoning/index.js';
 import { ParameterOptimizer } from './architecture-evolution/index.js';
 import { ModificationValidator, RollbackManager, DEFAULT_SAFETY_CONSTRAINTS, DEFAULT_CAPABILITY_CONSTRAINTS, DEFAULT_RESOURCE_CONSTRAINTS, } from './constraints/index.js';
+/** How long a tool without its own `timeout` gets before its signal aborts. */
 const DEFAULT_TOOL_TIMEOUT_MS = 30_000;
 function resolveModelName(agent, provider) {
     const model = agent.model;
@@ -31,9 +33,14 @@ export class SelfModifyingAgent {
     rollbackManager;
     currentContext = null;
     runQueue = Promise.resolve();
+    toolInvoker;
+    ownInvoker;
+    onApproval;
     constructor(options) {
         this.agent = options.agent;
         this.llm = options.llm;
+        this.toolInvoker = options.toolInvoker;
+        this.onApproval = options.onApproval;
         this.modelName = resolveModelName(options.agent, options.llm.provider);
         this.config = this.mergeConfig(options.config);
         const toolGenConfig = this.config.toolGeneration;
@@ -110,6 +117,18 @@ export class SelfModifyingAgent {
         this.runQueue = result.catch(() => undefined);
         return result;
     }
+    /** Releases the Cogitator the agent created for tool calls, when no `toolInvoker` was given. */
+    async close() {
+        const own = this.ownInvoker;
+        this.ownInvoker = undefined;
+        await own?.close();
+    }
+    invoker() {
+        if (this.toolInvoker)
+            return this.toolInvoker;
+        this.ownInvoker ??= new Cogitator();
+        return this.ownInvoker;
+    }
     async generateTool(gap) {
         if (!this.config.toolGeneration.enabled) {
             return null;
@@ -682,24 +701,19 @@ export class SelfModifyingAgent {
             error = `Tool "${call.name}" not found`;
         }
         else {
-            const parsed = t.parameters.safeParse(call.arguments);
-            if (!parsed.success) {
-                error = `Invalid arguments for "${call.name}": ${parsed.error.issues
-                    .map((i) => `${i.path.join('.') || '(root)'}: ${i.message}`)
-                    .join('; ')}`;
+            try {
+                const outcome = await this.invoker().invokeTool(t, call.arguments, {
+                    toolCallId: call.id,
+                    runId: ctx.runId,
+                    agentId: this.agent.id ?? this.agent.name ?? 'self-modifying',
+                    ...(t.timeout === undefined && { signal: AbortSignal.timeout(DEFAULT_TOOL_TIMEOUT_MS) }),
+                    ...(this.onApproval && { onApproval: this.onApproval }),
+                });
+                result = outcome.result;
+                error = outcome.error;
             }
-            else {
-                try {
-                    const toolContext = {
-                        agentId: this.agent.id ?? this.agent.name ?? 'self-modifying',
-                        runId: ctx.runId,
-                        signal: AbortSignal.timeout(t.timeout ?? DEFAULT_TOOL_TIMEOUT_MS),
-                    };
-                    result = await t.execute(parsed.data, toolContext);
-                }
-                catch (err) {
-                    error = err instanceof Error ? err.message : String(err);
-                }
+            catch (err) {
+                error = err instanceof Error ? err.message : String(err);
             }
         }
         const duration = Date.now() - startedAt;

package/dist/self-modifying-agent.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@cogitator-ai/self-modifying",
-  "version": "19.3.8",
+  "version": "19.4.1",
   "description": "Self-modifying agent capabilities for Cogitator - tool generation, meta-reasoning, architecture evolution",
   "type": "module",
   "main": "./dist/index.js",
@@ -9,7 +9,8 @@
   "exports": {
     ".": {
       "types": "./dist/index.d.ts",
-      "import": "./dist/index.js"
+      "import": "./dist/index.js",
+      "default": "./dist/index.js"
     }
   },
   "files": [
@@ -20,7 +21,8 @@
     "node": ">=22.12.0"
   },
   "dependencies": {
-    "@cogitator-ai/types": "0.35.0",
+    "@cogitator-ai/core": "0.35.0",
+    "@cogitator-ai/types": "0.37.0",
     "nanoid": "^6.0.1",
     "zod": "^4.6.5"
   },

package/src/__tests__/index.test.ts

@@ -1,86 +1,60 @@
 import { describe, it, expect } from 'vitest';
+import * as selfModifying from '../index';
 
+/**
+ * The package is imported once, while the file is collected: a cold import of
+ * every module behind the entry point is slow on a busy CI runner, and inside
+ * a test it ran into the per-test timeout.
+ */
 describe('@cogitator-ai/self-modifying', () => {
-  it('exports SelfModifyingAgent', async () => {
-    const { SelfModifyingAgent } = await import('../index');
-    expect(SelfModifyingAgent).toBeDefined();
-  });
-
-  it('exports tool generation components', async () => {
-    const { GapAnalyzer, ToolGenerator, ToolValidator, ToolSandbox, InMemoryGeneratedToolStore } =
-      await import('../index');
-
-    expect(GapAnalyzer).toBeDefined();
-    expect(ToolGenerator).toBeDefined();
-    expect(ToolValidator).toBeDefined();
-    expect(ToolSandbox).toBeDefined();
-    expect(InMemoryGeneratedToolStore).toBeDefined();
-  });
-
-  it('exports meta-reasoning components', async () => {
-    const { MetaReasoner, ObservationCollector, StrategySelector } = await import('../index');
-
-    expect(MetaReasoner).toBeDefined();
-    expect(ObservationCollector).toBeDefined();
-    expect(StrategySelector).toBeDefined();
-  });
-
-  it('exports architecture evolution components', async () => {
-    const { CapabilityAnalyzer, EvolutionStrategy, ParameterOptimizer } = await import('../index');
-
-    expect(CapabilityAnalyzer).toBeDefined();
-    expect(EvolutionStrategy).toBeDefined();
-    expect(ParameterOptimizer).toBeDefined();
-  });
-
-  it('exports constraints components', async () => {
-    const {
-      ModificationValidator,
-      RollbackManager,
-      InMemoryCheckpointStore,
-      DEFAULT_SAFETY_CONSTRAINTS,
-    } = await import('../index');
-
-    expect(ModificationValidator).toBeDefined();
-    expect(RollbackManager).toBeDefined();
-    expect(InMemoryCheckpointStore).toBeDefined();
-    expect(DEFAULT_SAFETY_CONSTRAINTS).toBeDefined();
-  });
-
-  it('exports events components', async () => {
-    const { SelfModifyingEventEmitter } = await import('../index');
-    expect(SelfModifyingEventEmitter).toBeDefined();
-  });
-
-  it('exports default configs', async () => {
-    const {
-      DEFAULT_SANDBOX_CONFIG,
-      DEFAULT_META_REASONING_CONFIG,
-      DEFAULT_MODE_PROFILES,
-      DEFAULT_SAFETY_CONSTRAINTS,
-      DEFAULT_CAPABILITY_CONSTRAINTS,
-      DEFAULT_RESOURCE_CONSTRAINTS,
-    } = await import('../index');
-
-    expect(DEFAULT_SANDBOX_CONFIG).toBeDefined();
-    expect(DEFAULT_META_REASONING_CONFIG).toBeDefined();
-    expect(DEFAULT_MODE_PROFILES).toBeDefined();
-    expect(DEFAULT_SAFETY_CONSTRAINTS).toBeDefined();
-    expect(DEFAULT_CAPABILITY_CONSTRAINTS).toBeDefined();
-    expect(DEFAULT_RESOURCE_CONSTRAINTS).toBeDefined();
-  });
-
-  it('exports prompt builders', async () => {
-    const {
-      buildGapAnalysisPrompt,
-      buildToolGenerationPrompt,
-      buildMetaAssessmentPrompt,
-      buildTaskProfilePrompt,
-    } = await import('../index');
-
-    expect(buildGapAnalysisPrompt).toBeDefined();
-    expect(buildToolGenerationPrompt).toBeDefined();
-    expect(buildMetaAssessmentPrompt).toBeDefined();
-    expect(buildTaskProfilePrompt).toBeDefined();
+  it.each([
+    ['the agent', ['SelfModifyingAgent']],
+    [
+      'tool generation components',
+      [
+        'GapAnalyzer',
+        'ToolGenerator',
+        'ToolValidator',
+        'ToolSandbox',
+        'InMemoryGeneratedToolStore',
+      ],
+    ],
+    ['meta-reasoning components', ['MetaReasoner', 'ObservationCollector', 'StrategySelector']],
+    [
+      'architecture evolution components',
+      ['CapabilityAnalyzer', 'EvolutionStrategy', 'ParameterOptimizer'],
+    ],
+    [
+      'constraints components',
+      [
+        'ModificationValidator',
+        'RollbackManager',
+        'InMemoryCheckpointStore',
+        'DEFAULT_SAFETY_CONSTRAINTS',
+      ],
+    ],
+    ['events components', ['SelfModifyingEventEmitter']],
+    [
+      'default configs',
+      [
+        'DEFAULT_SANDBOX_CONFIG',
+        'DEFAULT_META_REASONING_CONFIG',
+        'DEFAULT_MODE_PROFILES',
+        'DEFAULT_SAFETY_CONSTRAINTS',
+        'DEFAULT_CAPABILITY_CONSTRAINTS',
+        'DEFAULT_RESOURCE_CONSTRAINTS',
+      ],
+    ],
+    [
+      'prompt builders',
+      [
+        'buildGapAnalysisPrompt',
+        'buildToolGenerationPrompt',
+        'buildMetaAssessmentPrompt',
+        'buildTaskProfilePrompt',
+      ],
+    ],
+  ] as const)('exports %s', (_, names) => {
+    for (const name of names) expect(selfModifying[name], name).toBeDefined();
   });
 });

package/src/__tests__/tool-invocation.test.ts

@@ -0,0 +1,205 @@
+import { describe, it, expect, vi, afterEach } from 'vitest';
+import { z } from 'zod';
+import type {
+  Agent,
+  ChatRequest,
+  ChatResponse,
+  LLMBackend,
+  Message,
+  Tool,
+  ToolCall,
+  ToolInvoker,
+} from '@cogitator-ai/types';
+import { SelfModifyingAgent } from '../self-modifying-agent';
+
+function chatResponse(content: string, toolCalls?: ToolCall[]): ChatResponse {
+  return {
+    id: 'resp',
+    content,
+    toolCalls,
+    finishReason: toolCalls?.length ? 'tool_calls' : 'stop',
+    usage: { inputTokens: 10, outputTokens: 10, totalTokens: 20 },
+  };
+}
+
+/** Calls `call` once, then answers with what the tool messages said. */
+function scriptedLLM(call: ToolCall) {
+  const seen: Message[][] = [];
+  const llm: Partial<LLMBackend> = {
+    provider: 'openai',
+    chat: vi.fn(async (request: ChatRequest) => {
+      seen.push([...request.messages]);
+      const results = request.messages.filter((m) => m.role === 'tool');
+      return results.length === 0
+        ? chatResponse('', [call])
+        : chatResponse(`Tool said: ${results.map((m) => String(m.content)).join(' | ')}`);
+    }),
+  };
+  return { llm: llm as LLMBackend, seen };
+}
+
+function agentWith(tools: Tool[]): Agent {
+  return {
+    name: 'ops',
+    model: 'test-model',
+    instructions: 'Operate.',
+    tools,
+    config: { temperature: 0.5 },
+  } as Agent;
+}
+
+const plainConfig = {
+  toolGeneration: { enabled: false },
+  metaReasoning: { enabled: false },
+  architectureEvolution: { enabled: false },
+  constraints: { enabled: false },
+};
+
+function execTool() {
+  const execute = vi.fn(async ({ command }: { command: string }) => `ran ${command}`);
+  const tool: Tool<{ command: string }, string> = {
+    name: 'exec',
+    description: 'Run a shell command',
+    parameters: z.object({ command: z.string() }),
+    requiresApproval: true,
+    execute,
+    toJSON: () => ({
+      name: 'exec',
+      description: 'Run a shell command',
+      parameters: { type: 'object', properties: { command: { type: 'string' } } },
+    }),
+  };
+  return { tool: tool as Tool, execute };
+}
+
+const agents: SelfModifyingAgent[] = [];
+function selfModifying(options: ConstructorParameters<typeof SelfModifyingAgent>[0]) {
+  const agent = new SelfModifyingAgent(options);
+  agents.push(agent);
+  return agent;
+}
+
+afterEach(async () => {
+  await Promise.all(agents.splice(0).map((agent) => agent.close()));
+});
+
+describe('SelfModifyingAgent tool calls', () => {
+  it('never run a tool that needs approval when nobody approves it', async () => {
+    const { tool, execute } = execTool();
+    const { llm } = scriptedLLM({
+      id: 'c1',
+      name: 'exec',
+      arguments: { command: 'rm -rf /tmp/x' },
+    });
+
+    const result = await selfModifying({ agent: agentWith([tool]), llm, config: plainConfig }).run(
+      'clean up'
+    );
+
+    expect(execute).not.toHaveBeenCalled();
+    expect(result.output).toContain('needs approval');
+  });
+
+  it('run it once onApproval approves it', async () => {
+    const { tool, execute } = execTool();
+    const { llm } = scriptedLLM({ id: 'c1', name: 'exec', arguments: { command: 'ls' } });
+    const onApproval = vi.fn(() => ({ approved: true as const }));
+
+    const result = await selfModifying({
+      agent: agentWith([tool]),
+      llm,
+      config: plainConfig,
+      onApproval,
+    }).run('list files');
+
+    expect(onApproval).toHaveBeenCalledWith(
+      expect.objectContaining({ toolCallId: 'c1', toolName: 'exec', arguments: { command: 'ls' } })
+    );
+    expect(execute).toHaveBeenCalledTimes(1);
+    expect(result.output).toContain('ran ls');
+  });
+
+  it('run a tool whose parameters are a JSON schema instead of failing the run', async () => {
+    const execute = vi.fn(async (args: unknown) => ({ got: args }));
+    const jsonSchemaTool = {
+      name: 'lookup',
+      description: 'Look up',
+      parameters: { type: 'object', properties: { q: { type: 'string' } } },
+      execute,
+      toJSON: () => ({
+        name: 'lookup',
+        description: 'Look up',
+        parameters: { type: 'object' as const, properties: { q: { type: 'string' } } },
+      }),
+    } as unknown as Tool;
+    const { llm } = scriptedLLM({ id: 'c1', name: 'lookup', arguments: { q: 'cats' } });
+
+    const result = await selfModifying({
+      agent: agentWith([jsonSchemaTool]),
+      llm,
+      config: plainConfig,
+    }).run('look up cats');
+
+    expect(execute).toHaveBeenCalledWith({ q: 'cats' }, expect.anything());
+    expect(result.output).toContain('"got":{"q":"cats"}');
+  });
+
+  it('hand every call to the given tool invoker, sandbox and all', async () => {
+    const execute = vi.fn(async () => 'ran on the host');
+    const sandboxed: Tool = {
+      name: 'exec',
+      description: 'Run a shell command',
+      parameters: z.object({ command: z.string() }),
+      sandbox: { type: 'docker', image: 'alpine' },
+      execute,
+      toJSON: () => ({
+        name: 'exec',
+        description: 'Run a shell command',
+        parameters: { type: 'object', properties: { command: { type: 'string' } } },
+      }),
+    };
+    const invokeTool = vi.fn<ToolInvoker['invokeTool']>(async (tool, _args, options) => ({
+      callId: options?.toolCallId ?? '',
+      name: tool.name,
+      result: 'ran in the sandbox',
+    }));
+    const { llm } = scriptedLLM({ id: 'c9', name: 'exec', arguments: { command: 'ls' } });
+
+    const result = await selfModifying({
+      agent: agentWith([sandboxed]),
+      llm,
+      config: plainConfig,
+      toolInvoker: { invokeTool },
+    }).run('list files');
+
+    expect(execute).not.toHaveBeenCalled();
+    expect(invokeTool).toHaveBeenCalledWith(
+      sandboxed,
+      { command: 'ls' },
+      expect.objectContaining({ toolCallId: 'c9' })
+    );
+    expect(result.output).toContain('ran in the sandbox');
+  });
+
+  it('keep the tool timeout', async () => {
+    const slow: Tool = {
+      name: 'slow',
+      description: 'Slow',
+      parameters: z.object({}),
+      timeout: 20,
+      execute: () => new Promise((resolve) => setTimeout(() => resolve('late'), 2_000)),
+      toJSON: () => ({
+        name: 'slow',
+        description: 'Slow',
+        parameters: { type: 'object', properties: {} },
+      }),
+    };
+    const { llm } = scriptedLLM({ id: 'c1', name: 'slow', arguments: {} });
+
+    const result = await selfModifying({ agent: agentWith([slow]), llm, config: plainConfig }).run(
+      'go'
+    );
+
+    expect(result.output).toContain('timed out after 20ms');
+  });
+});

package/src/self-modifying-agent.ts

@@ -1,4 +1,5 @@
 import { nanoid } from 'nanoid';
+import { Cogitator } from '@cogitator-ai/core';
 import type {
   Agent,
   AgentConfig,
@@ -29,7 +30,8 @@ import type {
   ReasoningMode,
   Message,
   ToolSchema,
-  ToolContext,
+  ToolInvocationOptions,
+  ToolInvoker,
 } from '@cogitator-ai/types';
 import { DEFAULT_META_REASONING_CONFIG } from '@cogitator-ai/types';
 
@@ -69,6 +71,20 @@ export interface SelfModifyingAgentOptions {
   modificationConstraints?: Partial<ModificationConstraints>;
   /** Models architecture evolution may switch to. Model changes are never proposed when empty. */
   availableModels?: string[];
+  /**
+   * Runs the agent's tool calls the way a Cogitator run does: arguments validated against the
+   * tool's schema (Zod or JSON Schema), approval asked for calls that need it, the guardrails
+   * applied, sandboxed tools run in the sandbox and `tool.timeout` kept. Pass the `Cogitator`
+   * whose sandbox and guardrails should apply. Default: a Cogitator of its own without
+   * configuration, released by `close()`.
+   */
+  toolInvoker?: ToolInvoker;
+  /**
+   * Decides tool calls that need approval (`requiresApproval`), like `RunOptions.onApproval`.
+   * Without it the invoker's `guardrails.onToolApproval` decides. A self-modifying run cannot
+   * pause, so a call nobody approves is refused and the model is told why.
+   */
+  onApproval?: ToolInvocationOptions['onApproval'];
 }
 
 export interface SelfModifyingEventDataMap {
@@ -148,6 +164,7 @@ interface ToolCallOutcome {
   failed: boolean;
 }
 
+/** How long a tool without its own `timeout` gets before its signal aborts. */
 const DEFAULT_TOOL_TIMEOUT_MS = 30_000;
 
 function resolveModelName(agent: Agent, provider: string): string {
@@ -181,10 +198,15 @@ export class SelfModifyingAgent {
 
   private currentContext: RunContext | null = null;
   private runQueue: Promise<unknown> = Promise.resolve();
+  private readonly toolInvoker?: ToolInvoker;
+  private ownInvoker?: Cogitator;
+  private readonly onApproval?: ToolInvocationOptions['onApproval'];
 
   constructor(options: SelfModifyingAgentOptions) {
     this.agent = options.agent;
     this.llm = options.llm;
+    this.toolInvoker = options.toolInvoker;
+    this.onApproval = options.onApproval;
     this.modelName = resolveModelName(options.agent, options.llm.provider);
     this.config = this.mergeConfig(options.config);
 
@@ -280,6 +302,19 @@ export class SelfModifyingAgent {
     return result;
   }
 
+  /** Releases the Cogitator the agent created for tool calls, when no `toolInvoker` was given. */
+  async close(): Promise<void> {
+    const own = this.ownInvoker;
+    this.ownInvoker = undefined;
+    await own?.close();
+  }
+
+  private invoker(): ToolInvoker {
+    if (this.toolInvoker) return this.toolInvoker;
+    this.ownInvoker ??= new Cogitator();
+    return this.ownInvoker;
+  }
+
   async generateTool(gap: CapabilityGap): Promise<GeneratedTool | null> {
     if (!this.config.toolGeneration.enabled) {
       return null;
@@ -990,22 +1025,18 @@ export class SelfModifyingAgent {
     if (!t) {
       error = `Tool "${call.name}" not found`;
     } else {
-      const parsed = t.parameters.safeParse(call.arguments);
-      if (!parsed.success) {
-        error = `Invalid arguments for "${call.name}": ${parsed.error.issues
-          .map((i) => `${i.path.join('.') || '(root)'}: ${i.message}`)
-          .join('; ')}`;
-      } else {
-        try {
-          const toolContext: ToolContext = {
-            agentId: this.agent.id ?? this.agent.name ?? 'self-modifying',
-            runId: ctx.runId,
-            signal: AbortSignal.timeout(t.timeout ?? DEFAULT_TOOL_TIMEOUT_MS),
-          };
-          result = await t.execute(parsed.data, toolContext);
-        } catch (err) {
-          error = err instanceof Error ? err.message : String(err);
-        }
+      try {
+        const outcome = await this.invoker().invokeTool(t, call.arguments, {
+          toolCallId: call.id,
+          runId: ctx.runId,
+          agentId: this.agent.id ?? this.agent.name ?? 'self-modifying',
+          ...(t.timeout === undefined && { signal: AbortSignal.timeout(DEFAULT_TOOL_TIMEOUT_MS) }),
+          ...(this.onApproval && { onApproval: this.onApproval }),
+        });
+        result = outcome.result;
+        error = outcome.error;
+      } catch (err) {
+        error = err instanceof Error ? err.message : String(err);
       }
     }