@codyswann/lisa 4.71.3 → 4.71.5

package/dist/cli/hook-refresh-files.js

@@ -0,0 +1,209 @@
+/** Confine refresh IO and rollback to held native file identities. */
+import { constants } from "node:fs";
+import { lstat, open } from "node:fs/promises";
+import path from "node:path";
+const MAXIMUM = 4 * 1024 * 1024;
+/**
+ * Compare native objects; failed observations never mean absence.
+ * @param left - Fresh native metadata.
+ * @param right - Retained metadata.
+ * @returns Same device and inode.
+ */
+function sameIdentity(left, right) {
+    return left.dev === right.dev && left.ino === right.ino;
+}
+/**
+ * Require the pathname still selects its retained object.
+ * @param pin - Original native object.
+ */
+export async function checkPath(pin) {
+    const actual = await lstat(pin.filename, { bigint: true });
+    if (actual.isSymbolicLink() || !sameIdentity(actual, pin.identity))
+        throw new Error("Hook path changed after preflight");
+}
+/**
+ * Read a bounded regular descriptor, detecting growth or torn observations.
+ * @param pin - Retained file.
+ * @returns Complete bytes.
+ */
+export async function bytes(pin) {
+    const before = await pin.handle.stat({ bigint: true });
+    if (!before.isFile() ||
+        !sameIdentity(before, pin.identity) ||
+        before.size < 0n ||
+        before.size > BigInt(MAXIMUM))
+        throw new Error("Hook refresh requires bounded regular files");
+    const size = Number(before.size);
+    const buffer = Buffer.alloc(size + 1);
+    const cursor = { value: 0 };
+    while (cursor.value < buffer.length) {
+        const result = await pin.handle.read(buffer, cursor.value, buffer.length - cursor.value, cursor.value);
+        if (result.bytesRead === 0)
+            break;
+        cursor.value += result.bytesRead;
+    }
+    const after = await pin.handle.stat({ bigint: true });
+    if (cursor.value !== size ||
+        before.size !== after.size ||
+        before.mtimeNs !== after.mtimeNs ||
+        before.ctimeNs !== after.ctimeNs)
+        throw new Error("Hook changed during descriptor read");
+    return buffer.subarray(0, cursor.value);
+}
+/** Bounded original bytes and acknowledged writes on one retained destination. */
+export class HookPair {
+    source;
+    host;
+    sourceBytes;
+    hostBytes;
+    expected;
+    expectedMode;
+    /**
+     * Keep source and destination authority for one operation.
+     * @param source - Read-only package descriptor.
+     * @param host - Original writable host descriptor.
+     * @param sourceBytes - Authenticated release bytes.
+     * @param hostBytes - Bounded original backup.
+     */
+    constructor(source, host, sourceBytes, hostBytes) {
+        this.source = source;
+        this.host = host;
+        this.sourceBytes = sourceBytes;
+        this.hostBytes = hostBytes;
+        this.expected = hostBytes;
+        this.expectedMode = Number(host.identity.mode & 511n);
+    }
+    /**
+     * Write only the held inode; verify each acknowledged write before truncation.
+     * @param content - Complete replacement or backup bytes.
+     */
+    async write(content) {
+        const cursor = { value: 0 };
+        while (cursor.value < content.length) {
+            await this.assertOwnWrites();
+            const result = await this.host.handle.write(content, cursor.value, content.length - cursor.value, cursor.value);
+            if (result.bytesWritten <= 0)
+                throw new Error("Hook descriptor write made no progress");
+            const next = Buffer.alloc(Math.max(this.expected.length, cursor.value + result.bytesWritten));
+            this.expected.copy(next);
+            content.copy(next, cursor.value, cursor.value, cursor.value + result.bytesWritten);
+            this.expected = next;
+            cursor.value += result.bytesWritten;
+            await this.assertOwnWrites();
+        }
+        await this.assertOwnWrites();
+        await this.host.handle.truncate(content.length);
+        this.expected = Buffer.from(content);
+    }
+    /** Reject shared inodes or concurrent bytes before any further mutation. */
+    async assertOwnWrites() {
+        const info = await this.host.handle.stat({ bigint: true });
+        if (info.nlink > 1n ||
+            Number(info.mode & 511n) !== this.expectedMode ||
+            !(await bytes(this.host)).equals(this.expected))
+            throw new Error("Concurrent hook edit or hardlink preserved; rollback refused");
+    }
+    /**
+     * Change permissions only on the retained inode containing our writes.
+     * @param mode - Original authenticated source or backup permissions.
+     */
+    async chmod(mode) {
+        await this.assertOwnWrites();
+        await this.host.handle.chmod(mode);
+        this.expectedMode = mode;
+    }
+    /** Restore only this original inode while it contains our acknowledged writes. */
+    async restore() {
+        await this.assertOwnWrites();
+        await this.write(this.hostBytes);
+        await this.chmod(Number(this.host.identity.mode & 511n));
+        if (!(await bytes(this.host)).equals(this.hostBytes))
+            throw new Error("Descriptor rollback readback differs");
+    }
+}
+/** Operation-local native resources and error accumulation, always finally-closed. */
+export class HookFiles {
+    pins = [];
+    changed = [];
+    failures = [];
+    /**
+     * Retain a no-follow object before subsequent validation can fail.
+     * @param filename - Confined absolute path.
+     * @param flags - Native access flags.
+     * @returns Original object.
+     */
+    async retain(filename, flags) {
+        const identity = await lstat(filename, { bigint: true });
+        if (identity.isSymbolicLink() ||
+            (!identity.isFile() && !identity.isDirectory()))
+            throw new Error("Hook refresh requires regular objects");
+        const handle = await open(filename, flags | constants.O_NOFOLLOW);
+        const pin = { filename, handle, identity };
+        this.pins.push(pin);
+        if (!sameIdentity(await handle.stat({ bigint: true }), identity))
+            throw new Error("Hook identity changed during open");
+        return pin;
+    }
+    /**
+     * Hold every closed directory component including the resolved root.
+     * @param root - Canonical package or host root.
+     * @param relative - Closed directory suffix.
+     * @returns Pinned ancestors.
+     */
+    async directories(root, relative) {
+        const parts = relative.split("/");
+        const filenames = [
+            root,
+            ...parts.map((_part, index) => path.join(root, ...parts.slice(0, index + 1))),
+        ];
+        const results = [];
+        for (const filename of filenames) {
+            const pin = await this.retain(filename, constants.O_RDONLY | constants.O_DIRECTORY);
+            if (!pin.identity.isDirectory())
+                throw new Error("Hook refresh requires regular directory components");
+            results.push(pin);
+        }
+        return results;
+    }
+    /**
+     * Register a backup immediately before the first possible write.
+     * @param pair - Original descriptor and bytes.
+     */
+    mark(pair) {
+        this.changed.push(pair);
+    }
+    /**
+     * Preserve the original failure and attempt every descriptor-bound rollback.
+     * @param original - Original refresh failure.
+     */
+    async rollback(original) {
+        this.failures.push(original);
+        for (const pair of [...this.changed].reverse()) {
+            try {
+                await pair.restore();
+            }
+            catch (error) {
+                this.failures.push(error);
+            }
+        }
+    }
+    /** Close every retained handle even after preflight, write or rollback errors. */
+    async close() {
+        for (const pin of [...this.pins].reverse()) {
+            try {
+                await pin.handle.close();
+            }
+            catch (error) {
+                this.failures.push(error);
+            }
+        }
+    }
+    /** Surface all native failures, preserving the original error object first. */
+    assertSuccess() {
+        if (this.failures.length === 1)
+            throw this.failures[0];
+        if (this.failures.length > 1)
+            throw new AggregateError(this.failures, "Hook refresh failed; rollback or close also failed");
+    }
+}
+//# sourceMappingURL=hook-refresh-files.js.map

package/dist/cli/hook-refresh-files.js.map

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package/dist/cli/index.d.ts

@@ -15,12 +15,15 @@ import { runUi } from "./ui-cmd.js";
 import { runUpdate } from "./update-cmd.js";
 import { runUpdateCheck } from "./update-check.js";
 import { runVersion } from "./version-cmd.js";
+import { refreshHooks } from "./refresh-hooks-cmd.js";
 /**
  * Injectable collaborators for {@link createProgram}. Defaults wire the real
  * apply action and npm update-check; tests override them to observe the program
  * wiring without touching the registry or the orchestrator.
  */
 export interface ProgramDependencies {
+    /** Refreshes the explicitly selected released hook cohort only. */
+    refreshHooks: typeof refreshHooks;
     /** Applies Lisa to a destination (defaults to the real {@link runApply}). */
     runApply: typeof runApply;
     /** Creates a starter-backed project and applies Lisa overlays. */

package/dist/cli/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/cli/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AACpC,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAC;AACtC,OAAO,EAAE,uBAAuB,EAAE,MAAM,iCAAiC,CAAC;AAC1E,OAAO,EAEL,iBAAiB,EAClB,MAAM,0BAA0B,CAAC;AAClC,OAAO,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AACxC,OAAO,EAAE,eAAe,EAAE,MAAM,wBAAwB,CAAC;AACzD,OAAO,EAAE,YAAY,EAAyB,MAAM,iBAAiB,CAAC;AAEtE,OAAO,EACL,UAAU,EACV,eAAe,EACf,eAAe,EAEhB,MAAM,eAAe,CAAC;AACvB,OAAO,EAAE,kBAAkB,EAAE,MAAM,2BAA2B,CAAC;AAE/D,OAAO,EAEL,eAAe,EAChB,MAAM,oBAAoB,CAAC;AAC5B,OAAO,EAAE,YAAY,EAAE,MAAM,iBAAiB,CAAC;AAI/C,OAAO,EAEL,oBAAoB,EACrB,MAAM,0BAA0B,CAAC;AAClC,OAAO,EAAE,OAAO,EAAuB,MAAM,eAAe,CAAC;AAC7D,OAAO,EAAE,KAAK,EAAgB,MAAM,aAAa,CAAC;AAClD,OAAO,EAAE,SAAS,EAAE,MAAM,iBAAiB,CAAC;AAC5C,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AAEnD,OAAO,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AAO9C;;;;GAIG;AACH,MAAM,WAAW,mBAAmB;IAClC,6EAA6E;IAC7E,QAAQ,EAAE,OAAO,QAAQ,CAAC;IAC1B,kEAAkE;IAClE,eAAe,EAAE,OAAO,eAAe,CAAC;IACxC,4DAA4D;IAC5D,YAAY,EAAE,OAAO,YAAY,CAAC;IAClC,wCAAwC;IACxC,UAAU,EAAE,OAAO,UAAU,CAAC;IAC9B,yDAAyD;IACzD,SAAS,EAAE,OAAO,SAAS,CAAC;IAC5B,qCAAqC;IACrC,SAAS,EAAE,OAAO,SAAS,CAAC;IAC5B,4EAA4E;IAC5E,iBAAiB,EAAE,OAAO,iBAAiB,CAAC;IAC5C,2EAA2E;IAC3E,OAAO,EAAE,OAAO,OAAO,CAAC;IACxB,8DAA8D;IAC9D,KAAK,EAAE,OAAO,KAAK,CAAC;IACpB,iEAAiE;IACjE,uBAAuB,EAAE,OAAO,uBAAuB,CAAC;IACxD,sEAAsE;IACtE,eAAe,EAAE,OAAO,eAAe,CAAC;IACxC,uDAAuD;IACvD,YAAY,EAAE,OAAO,YAAY,CAAC;IAClC,qEAAqE;IACrE,oBAAoB,EAAE,OAAO,oBAAoB,CAAC;IAClD,iEAAiE;IACjE,UAAU,EAAE,OAAO,UAAU,CAAC;IAC9B,4EAA4E;IAC5E,eAAe,EAAE,OAAO,eAAe,CAAC;IACxC,kEAAkE;IAClE,eAAe,EAAE,OAAO,eAAe,CAAC;IACxC,gFAAgF;IAChF,cAAc,EAAE,OAAO,cAAc,CAAC;IACtC,0EAA0E;IAC1E,kBAAkB,EAAE,OAAO,kBAAkB,CAAC;CAC/C;AAgND;;;;;;;;;;GAUG;AACH,wBAAgB,aAAa,CAC3B,YAAY,GAAE,OAAO,CAAC,mBAAmB,CAAM,GAC9C,OAAO,CAiET;AAED,OAAO,EAAE,cAAc,EAAE,MAAM,cAAc,CAAC"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/cli/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AACpC,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAC;AACtC,OAAO,EAAE,uBAAuB,EAAE,MAAM,iCAAiC,CAAC;AAC1E,OAAO,EAEL,iBAAiB,EAClB,MAAM,0BAA0B,CAAC;AAClC,OAAO,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AACxC,OAAO,EAAE,eAAe,EAAE,MAAM,wBAAwB,CAAC;AACzD,OAAO,EAAE,YAAY,EAAyB,MAAM,iBAAiB,CAAC;AAEtE,OAAO,EACL,UAAU,EACV,eAAe,EACf,eAAe,EAEhB,MAAM,eAAe,CAAC;AACvB,OAAO,EAAE,kBAAkB,EAAE,MAAM,2BAA2B,CAAC;AAE/D,OAAO,EAEL,eAAe,EAChB,MAAM,oBAAoB,CAAC;AAC5B,OAAO,EAAE,YAAY,EAAE,MAAM,iBAAiB,CAAC;AAI/C,OAAO,EAEL,oBAAoB,EACrB,MAAM,0BAA0B,CAAC;AAClC,OAAO,EAAE,OAAO,EAAuB,MAAM,eAAe,CAAC;AAC7D,OAAO,EAAE,KAAK,EAAgB,MAAM,aAAa,CAAC;AAClD,OAAO,EAAE,SAAS,EAAE,MAAM,iBAAiB,CAAC;AAC5C,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AAEnD,OAAO,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AAM9C,OAAO,EAAyB,YAAY,EAAE,MAAM,wBAAwB,CAAC;AAE7E;;;;GAIG;AACH,MAAM,WAAW,mBAAmB;IAClC,mEAAmE;IACnE,YAAY,EAAE,OAAO,YAAY,CAAC;IAClC,6EAA6E;IAC7E,QAAQ,EAAE,OAAO,QAAQ,CAAC;IAC1B,kEAAkE;IAClE,eAAe,EAAE,OAAO,eAAe,CAAC;IACxC,4DAA4D;IAC5D,YAAY,EAAE,OAAO,YAAY,CAAC;IAClC,wCAAwC;IACxC,UAAU,EAAE,OAAO,UAAU,CAAC;IAC9B,yDAAyD;IACzD,SAAS,EAAE,OAAO,SAAS,CAAC;IAC5B,qCAAqC;IACrC,SAAS,EAAE,OAAO,SAAS,CAAC;IAC5B,4EAA4E;IAC5E,iBAAiB,EAAE,OAAO,iBAAiB,CAAC;IAC5C,2EAA2E;IAC3E,OAAO,EAAE,OAAO,OAAO,CAAC;IACxB,8DAA8D;IAC9D,KAAK,EAAE,OAAO,KAAK,CAAC;IACpB,iEAAiE;IACjE,uBAAuB,EAAE,OAAO,uBAAuB,CAAC;IACxD,sEAAsE;IACtE,eAAe,EAAE,OAAO,eAAe,CAAC;IACxC,uDAAuD;IACvD,YAAY,EAAE,OAAO,YAAY,CAAC;IAClC,qEAAqE;IACrE,oBAAoB,EAAE,OAAO,oBAAoB,CAAC;IAClD,iEAAiE;IACjE,UAAU,EAAE,OAAO,UAAU,CAAC;IAC9B,4EAA4E;IAC5E,eAAe,EAAE,OAAO,eAAe,CAAC;IACxC,kEAAkE;IAClE,eAAe,EAAE,OAAO,eAAe,CAAC;IACxC,gFAAgF;IAChF,cAAc,EAAE,OAAO,cAAc,CAAC;IACtC,0EAA0E;IAC1E,kBAAkB,EAAE,OAAO,kBAAkB,CAAC;CAC/C;AAiND;;;;;;;;;;GAUG;AACH,wBAAgB,aAAa,CAC3B,YAAY,GAAE,OAAO,CAAC,mBAAmB,CAAM,GAC9C,OAAO,CAmET;AAED,OAAO,EAAE,cAAc,EAAE,MAAM,cAAc,CAAC"}

package/dist/cli/index.js

@@ -26,7 +26,9 @@ import { addRemoteEnvCommand } from "./remote-env-cmd.js";
 import { addWorkstationCommand } from "./workstation-cmd.js";
 import { getPackageVersion } from "./version.js";
 import { addEffectivenessCommand } from "./effectiveness-cmd.js";
+import { addHookRefreshCommand, refreshHooks } from "./refresh-hooks-cmd.js";
 const DEFAULT_DEPENDENCIES = {
+    refreshHooks,
     runApply,
     runSetupProject,
     runSetupWiki,
@@ -202,6 +204,7 @@ export function createProgram(dependencies = {}) {
         .version(getPackageVersion())
         .option("--no-update-check", "Skip the npm latest-version check");
     addUpdateCheckHook(program, deps);
+    addHookRefreshCommand(program, deps.refreshHooks);
     // `apply` is both the explicit subcommand and the default command, so the
     // historical positional form `lisa <destination>` routes here unchanged and
     // produces the same result as `lisa apply <destination>`. Commander rejects a

package/dist/cli/index.js.map

@@ -1 +1 @@
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package/dist/cli/refresh-hooks-cmd.d.ts

@@ -0,0 +1,27 @@
+import type { Command } from "commander";
+import { type HashLedger } from "../core/lisa-owned-provenance.js";
+/**
+ * Register finite refresh without entering full apply.
+ * @param program - CLI program.
+ * @param execute - Native refresh or command-routing fixture.
+ */
+export declare function addHookRefreshCommand(program: Command, execute: typeof refreshHooks): void;
+/** Installed-package and shipping-history seams for protocol fixtures. */
+export interface HookRefreshDependencies {
+    readonly packageDir?: string;
+    readonly ledger?: HashLedger;
+}
+/**
+ * Select only unique declared guards and required companions.
+ * @param selection - Exact comma-separated names.
+ * @returns Deterministic filenames.
+ */
+export declare function hookCohort(selection: string): readonly string[];
+/**
+ * Refresh a closed cohort with bounded backups on retained original inodes.
+ * @param destination - Host root; unrelated dirty files are permitted.
+ * @param dependencies - Package/history defaults or fixture inputs.
+ * @param selection - Closed guard names.
+ */
+export declare function refreshHooks(destination: string, dependencies?: HookRefreshDependencies, selection?: string): Promise<void>;
+//# sourceMappingURL=refresh-hooks-cmd.d.ts.map

package/dist/cli/refresh-hooks-cmd.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"refresh-hooks-cmd.d.ts","sourceRoot":"","sources":["../../src/cli/refresh-hooks-cmd.ts"],"names":[],"mappings":"AAMA,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AACzC,OAAO,EAEL,KAAK,UAAU,EAChB,MAAM,kCAAkC,CAAC;AAqB1C;;;;GAIG;AACH,wBAAgB,qBAAqB,CACnC,OAAO,EAAE,OAAO,EAChB,OAAO,EAAE,OAAO,YAAY,GAC3B,IAAI,CAcN;AAED,0EAA0E;AAC1E,MAAM,WAAW,uBAAuB;IACtC,QAAQ,CAAC,UAAU,CAAC,EAAE,MAAM,CAAC;IAC7B,QAAQ,CAAC,MAAM,CAAC,EAAE,UAAU,CAAC;CAC9B;AAED;;;;GAIG;AACH,wBAAgB,UAAU,CAAC,SAAS,EAAE,MAAM,GAAG,SAAS,MAAM,EAAE,CAY/D;AAqHD;;;;;GAKG;AACH,wBAAsB,YAAY,CAChC,WAAW,EAAE,MAAM,EACnB,YAAY,GAAE,uBAA4B,EAC1C,SAAS,SAAsB,GAC9B,OAAO,CAAC,IAAI,CAAC,CAqCf"}

package/dist/cli/refresh-hooks-cmd.js

@@ -0,0 +1,156 @@
+/** Refresh a finite released hook cohort through retained native file identities. */
+import { createHash } from "node:crypto";
+import { constants } from "node:fs";
+import { realpath } from "node:fs/promises";
+import path from "node:path";
+import { fileURLToPath } from "node:url";
+import { classifyHostCopy, } from "../core/lisa-owned-provenance.js";
+import { LISA_OWNED_HASH_LEDGER } from "../core/lisa-owned-hash-ledger.js";
+import { ConsoleLogger } from "../logging/index.js";
+import { HookFiles, HookPair, bytes, checkPath, } from "./hook-refresh-files.js";
+const COHORTS = {
+    "parity-safety-net": [
+        "parity-safety-net.sh",
+        "parity-safety-net-heredoc.py",
+        "guard-dedupe.bash",
+    ],
+    "block-no-verify": ["block-no-verify.sh", "guard-dedupe.bash"],
+};
+const PREFIX = "scripts/lisa-hooks";
+/**
+ * Register finite refresh without entering full apply.
+ * @param program - CLI program.
+ * @param execute - Native refresh or command-routing fixture.
+ */
+export function addHookRefreshCommand(program, execute) {
+    program
+        .command("refresh-hooks")
+        .description("Refresh only explicitly selected released guards and companions")
+        .argument("<destination>", "Host project root")
+        .requiredOption("--guards <names>", "Closed guard cohort: parity-safety-net,block-no-verify")
+        .action(async (destination, options) => {
+        await execute(destination, {}, options.guards);
+    });
+}
+/**
+ * Select only unique declared guards and required companions.
+ * @param selection - Exact comma-separated names.
+ * @returns Deterministic filenames.
+ */
+export function hookCohort(selection) {
+    const names = selection.split(",");
+    if (new Set(names).size !== names.length ||
+        names.some(name => !Object.hasOwn(COHORTS, name)))
+        throw new Error("Select unique closed guards: parity-safety-net,block-no-verify");
+    return [...new Set(names.flatMap(name => COHORTS[name] ?? []))].sort((left, right) => left.localeCompare(right));
+}
+/**
+ * Validate the installed release through a retained descriptor.
+ * @param packageDir - Installed package root.
+ * @param files - Lifetime handle registry.
+ */
+async function assertReleasedPackage(packageDir, files) {
+    const pin = await files.retain(path.join(packageDir, "package.json"), constants.O_RDONLY);
+    const metadata = JSON.parse((await bytes(pin)).toString("utf8"));
+    if (typeof metadata !== "object" ||
+        metadata === null ||
+        !("name" in metadata) ||
+        metadata.name !== "@codyswann/lisa" ||
+        !("version" in metadata) ||
+        typeof metadata.version !== "string" ||
+        !/^\d+\.\d+\.\d+$/.test(metadata.version) ||
+        !("lisaReleaseTag" in metadata) ||
+        metadata.lisaReleaseTag !== `v${metadata.version}` ||
+        !("lisaReleaseCommit" in metadata) ||
+        typeof metadata.lisaReleaseCommit !== "string" ||
+        !/^[0-9a-f]{40}$/.test(metadata.lisaReleaseCommit))
+        throw new Error("Hook refresh requires a released Lisa package");
+    await checkPath(pin);
+}
+/**
+ * Authenticate every companion before writing.
+ * @param root - Host root.
+ * @param packageDir - Release root.
+ * @param ledger - Shipping history.
+ * @param hooks - Closed filenames.
+ * @param files - Lifetime handle registry.
+ * @returns Descriptor-bound cohort and ancestors.
+ */
+async function prepare(root, packageDir, ledger, hooks, files) {
+    const dirs = [
+        ...(await files.directories(root, PREFIX)),
+        ...(await files.directories(packageDir, `all/copy-overwrite/${PREFIX}`)),
+    ];
+    await assertReleasedPackage(packageDir, files);
+    const results = await Promise.allSettled(hooks.map(async (name) => {
+        const relative = `${PREFIX}/${name}`;
+        const source = await files.retain(path.join(packageDir, "all/copy-overwrite", relative), constants.O_RDONLY);
+        const host = await files.retain(path.join(root, relative), constants.O_RDWR);
+        if ((await host.handle.stat({ bigint: true })).nlink !== 1n)
+            throw new Error("Hook refresh requires single-link host files");
+        const sourceBytes = await bytes(source);
+        const hostBytes = await bytes(host);
+        if (!(ledger[relative] ?? []).includes(createHash("sha256").update(sourceBytes).digest("hex")))
+            throw new Error(`${relative}: packaged hook is not recorded shipping source`);
+        const verdict = classifyHostCopy(relative, hostBytes, sourceBytes, ledger);
+        if (verdict.kind !== "identical" && verdict.kind !== "provably-stale")
+            throw new Error(`${relative}: preserved ${verdict.kind} host hook`);
+        return new HookPair(source, host, sourceBytes, hostBytes);
+    }));
+    const failed = results.find(result => result.status === "rejected");
+    if (failed?.status === "rejected")
+        throw failed.reason;
+    const pairs = results.flatMap(result => result.status === "fulfilled" ? [result.value] : []);
+    return { dirs, pairs };
+}
+/**
+ * Recheck original paths, source bytes and untouched host bytes/mode.
+ * @param pair - Retained companion.
+ * @param dirs - Retained ancestor authority.
+ */
+async function beforeWrite(pair, dirs) {
+    for (const pin of [...dirs, pair.source, pair.host])
+        await checkPath(pin);
+    const actual = await pair.host.handle.stat({ bigint: true });
+    if (actual.nlink !== 1n ||
+        actual.mode !== pair.host.identity.mode ||
+        !(await bytes(pair.source)).equals(pair.sourceBytes) ||
+        !(await bytes(pair.host)).equals(pair.hostBytes))
+        throw new Error("Hook changed after preflight");
+}
+/**
+ * Refresh a closed cohort with bounded backups on retained original inodes.
+ * @param destination - Host root; unrelated dirty files are permitted.
+ * @param dependencies - Package/history defaults or fixture inputs.
+ * @param selection - Closed guard names.
+ */
+export async function refreshHooks(destination, dependencies = {}, selection = "parity-safety-net") {
+    if (!constants.O_NOFOLLOW || !constants.O_DIRECTORY)
+        throw new Error("Hook refresh requires native no-follow descriptor support");
+    const root = await realpath(path.resolve(destination));
+    const packageDir = await realpath(dependencies.packageDir ??
+        path.resolve(path.dirname(fileURLToPath(import.meta.url)), "../.."));
+    const files = new HookFiles();
+    try {
+        const { dirs, pairs } = await prepare(root, packageDir, dependencies.ledger ?? LISA_OWNED_HASH_LEDGER, hookCohort(selection), files);
+        for (const pair of pairs) {
+            await beforeWrite(pair, dirs);
+            files.mark(pair);
+            await pair.write(pair.sourceBytes);
+            await pair.chmod(Number(pair.source.identity.mode & 511n));
+            for (const pin of [...dirs, pair.source, pair.host])
+                await checkPath(pin);
+            if (!(await bytes(pair.host)).equals(pair.sourceBytes))
+                throw new Error("Hook refresh readback differs");
+        }
+    }
+    catch (error) {
+        await files.rollback(error);
+    }
+    finally {
+        await files.close();
+    }
+    files.assertSuccess();
+    new ConsoleLogger().success(`Refreshed only ${selection} and its verified companions`);
+}
+//# sourceMappingURL=refresh-hooks-cmd.js.map

package/dist/cli/refresh-hooks-cmd.js.map

@@ -0,0 +1 @@
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package/dist/core/lisa-owned-hash-ledger.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"lisa-owned-hash-ledger.d.ts","sourceRoot":"","sources":["../../src/core/lisa-owned-hash-ledger.ts"],"names":[],"mappings":"AACA,6EAA6E;AAE7E;;;;;;;GAOG;AACH,eAAO,MAAM,sBAAsB,EAAE,QAAQ,CAC3C,MAAM,CAAC,MAAM,EAAE,SAAS,MAAM,EAAE,CAAC,CA6xDjC,CAAC;AAEH;;;;;;;;;;;;;;;GAeG;AACH,eAAO,MAAM,+BAA+B,EAAE,QAAQ,CACpD,MAAM,CAAC,MAAM,EAAE,SAAS,MAAM,EAAE,CAAC,CAgsDjC,CAAC"}
+{"version":3,"file":"lisa-owned-hash-ledger.d.ts","sourceRoot":"","sources":["../../src/core/lisa-owned-hash-ledger.ts"],"names":[],"mappings":"AACA,6EAA6E;AAE7E;;;;;;;GAOG;AACH,eAAO,MAAM,sBAAsB,EAAE,QAAQ,CAC3C,MAAM,CAAC,MAAM,EAAE,SAAS,MAAM,EAAE,CAAC,CAuyDjC,CAAC;AAEH;;;;;;;;;;;;;;;GAeG;AACH,eAAO,MAAM,+BAA+B,EAAE,QAAQ,CACpD,MAAM,CAAC,MAAM,EAAE,SAAS,MAAM,EAAE,CAAC,CA0sDjC,CAAC"}

package/dist/core/lisa-owned-hash-ledger.js

@@ -539,6 +539,9 @@ export const LISA_OWNED_HASH_LEDGER = Object.freeze({
         "1c0c9d1442d65cc848a80bce010fc0d7d9f3792b9080df03ce3286177b4d37a0",
         "bf1f8bd4cfd5317fb9078e0efaa8c66850616a29bf61968baacf2a1842e26a1b",
     ]),
+    "scripts/lib/npm-update-classifier-cache.mjs": Object.freeze([
+        "92272e40617ca9d620ff47e3ffe07a0e5bc1a3949d139752aa2675398ab49f9b",
+    ]),
     "scripts/lib/npm-update-contract.mjs": Object.freeze([
         "6905dd9d5747702ab502b66bcb38b6d4dcb30127f02466d29b3905f53c27981d",
         "c0d43613e4675bd3ec4585040d87a21821ec40b32739502d9124863f4e3e6ee0",
@@ -610,10 +613,12 @@ export const LISA_OWNED_HASH_LEDGER = Object.freeze({
     "scripts/lib/npm-update-helper-inventory.mjs": Object.freeze([
         "009027d139bad70f711306101dfa8c3c1e6d3ff2989820b1d8eff02b87504323",
         "33ab2fcba24552a378a75314fe021b25ae6862a6e3c7c4f6b83250f9749264bb",
+        "3561c20458d74eff34650d6b4366f4f03ed4e7825ae886ea78394f63f98a18bb",
         "39bf4d553af77101e03946ebd4769a303af1098d8f5f938c3a3259695d59d065",
         "da1bd212a20406c060d26c52bc8e67dac3fef51afafb604042b9c6e26b07bdb6",
     ]),
     "scripts/lib/npm-update-helper.mjs": Object.freeze([
+        "41e5a37769ec3737829ed1948d0a1442792b25d120f0fb4f4b5e424a50f34705",
         "d6ad6d094f56a1d08fabbae7e2df90779f7912d3380a4c9e792b305863901dda",
         "f4012383184237aa0a7ca21847864fdcc2241f94fd3d2cd6d82a6345763e5824",
     ]),
@@ -1257,6 +1262,7 @@ export const LISA_OWNED_HASH_LEDGER = Object.freeze({
         "1bf3512bb94923a6cb25b1e7a619a3fc8e1336bffa16f499b459aaee3eaed66d",
         "1d4fbe135f1bb4e861d286a6512ed201d4522250dfe3f9eba6584bc5ff166a95",
         "2b1ca7d317dea3af106df1a74b1718e3df9c18e76e9d9d769aa3271b7abf8a3f",
+        "2b3d806137b34bfdd21be9e76ca5159f7b11fbd3ca9223d99bef298e42f49c0d",
         "2bdba97c9a1ccc0e70247ee02b5eff02c042aba83b8e7fed3dfbf29a8a83b394",
         "2da3ad6d7680b61e20b48022e57b8960e063266cb26c197c2c8daa89adf4b648",
         "388cf8847581d96a1ff8ea98290a33a5f96d67cdd502ea807a0b8d88efe90e19",
@@ -1520,6 +1526,7 @@ export const LISA_OWNED_HASH_LEDGER = Object.freeze({
     "scripts/lisa-scratch-run.sh": Object.freeze([
         "375f52fc823be97c9d12a774b15ad353c5ef2d99e8073cc7ca94dfbdcb62fe72",
         "53dc40fb45907273b435a280a22ceb65d4edf7aecec60e154801552a3b219464",
+        "6fdec1ad0441d7636dc6749c44a23167baf7b75004f156b8a7d4ce1c18c790b7",
         "ef3c38f8d1d2f48ba265e21f841310d25142228dac57b0a5742c7d902113ca9a",
     ]),
     "scripts/lisa-self-update.mjs": Object.freeze([
@@ -1755,6 +1762,7 @@ export const LISA_OWNED_HASH_LEDGER = Object.freeze({
         "5e8881466a13bdfcaefa5ae056c59e9fc869c85f83701ef3d770473aaece3b12",
         "617976fa328bde110f953967490e2cacb22fa3c13963b1ccece71b830feb929f",
         "6356484022fc514a64983af62765de0cb0234a3a2747bada9b585a554c545547",
+        "64723c62b50713cf171f5e1a2727375ce304682e5735332b6e768de112cc2f9c",
         "647f264e008ed9df4703ebbedc3aad71991c1c11ce6f77da69794e697448cf97",
         "6ae05afed835da768a443d2286fff480925f6a81633ccbc540c859a50a720fe2",
         "70117ada2fe96b4697f695f860547a0e47eb7d20e864eac929047722cb3e6e2c",
@@ -1766,8 +1774,10 @@ export const LISA_OWNED_HASH_LEDGER = Object.freeze({
         "baa8ffc248ce29c30d10b579960b34b7836c7d7f47651ced3cbb551dfee65291",
         "bddb9b01bb7553dfd54b13d128b053d8def52bee69b591906aa6ce4a270aafcd",
         "c11328d3d4fd6d0f82ad51afc21f710877bd8dd2643c9d1a7d0fd2fed60358eb",
+        "d2c230dbd3530523e8d3abd6c66a5584987a2588b6861394522447854fa89f0e",
         "d2ea6e10d3023a39f4e63121858beabe66e7a8139eaabd1ce9593212fd8c5980",
         "e5c773e09e6ce00c02300d29be403fadcee92e439fd6ae25e28c5f3c93af8ccc",
+        "e9048ea95f21e9f6f400853da11a23f1159368d1768215c968a1d6d357f8bbbf",
         "f558a2582e106b84f26e48572ac3b3cc3b45aa20988d1b7ed618c2579b05b251",
         "fd96a6f85f2a3dae85c032d7a32a31258305e04aaaa0aa8ed5c25a39e5a3d73c",
         "fe96d8b0227ca76e2ee92bcc233fa60b011d0990e69c35e80fc752ca7977e6b9",
@@ -2354,6 +2364,9 @@ export const LISA_OWNED_HASH_HISTORY_DERIVED = Object.freeze({
         "1c0c9d1442d65cc848a80bce010fc0d7d9f3792b9080df03ce3286177b4d37a0",
         "bf1f8bd4cfd5317fb9078e0efaa8c66850616a29bf61968baacf2a1842e26a1b",
     ]),
+    "scripts/lib/npm-update-classifier-cache.mjs": Object.freeze([
+        "92272e40617ca9d620ff47e3ffe07a0e5bc1a3949d139752aa2675398ab49f9b",
+    ]),
     "scripts/lib/npm-update-contract.mjs": Object.freeze([
         "6905dd9d5747702ab502b66bcb38b6d4dcb30127f02466d29b3905f53c27981d",
         "c0d43613e4675bd3ec4585040d87a21821ec40b32739502d9124863f4e3e6ee0",
@@ -2425,10 +2438,12 @@ export const LISA_OWNED_HASH_HISTORY_DERIVED = Object.freeze({
     "scripts/lib/npm-update-helper-inventory.mjs": Object.freeze([
         "009027d139bad70f711306101dfa8c3c1e6d3ff2989820b1d8eff02b87504323",
         "33ab2fcba24552a378a75314fe021b25ae6862a6e3c7c4f6b83250f9749264bb",
+        "3561c20458d74eff34650d6b4366f4f03ed4e7825ae886ea78394f63f98a18bb",
         "39bf4d553af77101e03946ebd4769a303af1098d8f5f938c3a3259695d59d065",
         "da1bd212a20406c060d26c52bc8e67dac3fef51afafb604042b9c6e26b07bdb6",
     ]),
     "scripts/lib/npm-update-helper.mjs": Object.freeze([
+        "41e5a37769ec3737829ed1948d0a1442792b25d120f0fb4f4b5e424a50f34705",
         "d6ad6d094f56a1d08fabbae7e2df90779f7912d3380a4c9e792b305863901dda",
         "f4012383184237aa0a7ca21847864fdcc2241f94fd3d2cd6d82a6345763e5824",
     ]),
@@ -3026,6 +3041,7 @@ export const LISA_OWNED_HASH_HISTORY_DERIVED = Object.freeze({
         "14fc5e292aebf83dd24fec12fb32e2beb509a9324f127a24a64d5c5d4d05c576",
         "1bf3512bb94923a6cb25b1e7a619a3fc8e1336bffa16f499b459aaee3eaed66d",
         "1d4fbe135f1bb4e861d286a6512ed201d4522250dfe3f9eba6584bc5ff166a95",
+        "2b3d806137b34bfdd21be9e76ca5159f7b11fbd3ca9223d99bef298e42f49c0d",
         "2bdba97c9a1ccc0e70247ee02b5eff02c042aba83b8e7fed3dfbf29a8a83b394",
         "2da3ad6d7680b61e20b48022e57b8960e063266cb26c197c2c8daa89adf4b648",
         "388cf8847581d96a1ff8ea98290a33a5f96d67cdd502ea807a0b8d88efe90e19",
@@ -3268,6 +3284,7 @@ export const LISA_OWNED_HASH_HISTORY_DERIVED = Object.freeze({
     "scripts/lisa-scratch-run.sh": Object.freeze([
         "375f52fc823be97c9d12a774b15ad353c5ef2d99e8073cc7ca94dfbdcb62fe72",
         "53dc40fb45907273b435a280a22ceb65d4edf7aecec60e154801552a3b219464",
+        "6fdec1ad0441d7636dc6749c44a23167baf7b75004f156b8a7d4ce1c18c790b7",
         "ef3c38f8d1d2f48ba265e21f841310d25142228dac57b0a5742c7d902113ca9a",
     ]),
     "scripts/lisa-self-update.mjs": Object.freeze([
@@ -3500,6 +3517,7 @@ export const LISA_OWNED_HASH_HISTORY_DERIVED = Object.freeze({
         "5e8881466a13bdfcaefa5ae056c59e9fc869c85f83701ef3d770473aaece3b12",
         "617976fa328bde110f953967490e2cacb22fa3c13963b1ccece71b830feb929f",
         "6356484022fc514a64983af62765de0cb0234a3a2747bada9b585a554c545547",
+        "64723c62b50713cf171f5e1a2727375ce304682e5735332b6e768de112cc2f9c",
         "647f264e008ed9df4703ebbedc3aad71991c1c11ce6f77da69794e697448cf97",
         "6ae05afed835da768a443d2286fff480925f6a81633ccbc540c859a50a720fe2",
         "70117ada2fe96b4697f695f860547a0e47eb7d20e864eac929047722cb3e6e2c",
@@ -3511,8 +3529,10 @@ export const LISA_OWNED_HASH_HISTORY_DERIVED = Object.freeze({
         "baa8ffc248ce29c30d10b579960b34b7836c7d7f47651ced3cbb551dfee65291",
         "bddb9b01bb7553dfd54b13d128b053d8def52bee69b591906aa6ce4a270aafcd",
         "c11328d3d4fd6d0f82ad51afc21f710877bd8dd2643c9d1a7d0fd2fed60358eb",
+        "d2c230dbd3530523e8d3abd6c66a5584987a2588b6861394522447854fa89f0e",
         "d2ea6e10d3023a39f4e63121858beabe66e7a8139eaabd1ce9593212fd8c5980",
         "e5c773e09e6ce00c02300d29be403fadcee92e439fd6ae25e28c5f3c93af8ccc",
+        "e9048ea95f21e9f6f400853da11a23f1159368d1768215c968a1d6d357f8bbbf",
         "f558a2582e106b84f26e48572ac3b3cc3b45aa20988d1b7ed618c2579b05b251",
         "fd96a6f85f2a3dae85c032d7a32a31258305e04aaaa0aa8ed5c25a39e5a3d73c",
         "fe96d8b0227ca76e2ee92bcc233fa60b011d0990e69c35e80fc752ca7977e6b9",