@codyswann/lisa 3.48.6 → 3.49.0

package/dist/cli/doctor-hook-copy-parity.d.ts

@@ -0,0 +1,8 @@
+import type { DoctorCheck } from "./doctor.js";
+/**
+ * Report hooks whose tracked copies declare different features.
+ * @param targetPath - Project path to inspect
+ * @returns Doctor check result
+ */
+export declare function checkHookCopyParity(targetPath: string): Promise<DoctorCheck>;
+//# sourceMappingURL=doctor-hook-copy-parity.d.ts.map

package/dist/cli/doctor-hook-copy-parity.d.ts.map

@@ -0,0 +1 @@
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package/dist/cli/doctor-hook-copy-parity.js

@@ -0,0 +1,121 @@
+/**
+ * Report sibling copies of one git hook that disagree about a declared feature.
+ *
+ * Answers a question no other check asks. The Lisa-owned artifact check
+ * (`doctor-lisa-owned-artifacts`) compares one destination path in a project
+ * against the copies the package ships for it — "is this host running a stale
+ * copy of what we shipped?". This asks the orthogonal question: "do the copies
+ * inside ONE tree agree with each other?" A second copy at a different path,
+ * in a directory the package does not ship, is invisible to the first check by
+ * construction and was invisible for four weeks (CodySwannGT/lisa#2847).
+ *
+ * Naturally quiet in a host project, where each hook has exactly one tracked
+ * copy and there is nothing to disagree.
+ * @module cli/doctor-hook-copy-parity
+ */
+import { execFile } from "node:child_process";
+import { readFile } from "node:fs/promises";
+import * as path from "node:path";
+import { promisify } from "node:util";
+import { declaredHookFeatures, deriveHookCopyGroups, describeHookCopyFinding, findHookCopyDrift, } from "../core/hook-copy-parity.js";
+const CHECK_NAME = "Hook copies agree?";
+const GIT_TIMEOUT_MS = 10_000;
+const GIT_MAX_BUFFER_BYTES = 8 * 1024 * 1024;
+const MAX_REPORTED_FINDINGS = 5;
+const run = promisify(execFile);
+/**
+ * Every path git tracks in a checkout.
+ * @param targetPath - Project path to inspect
+ * @returns Repo-relative tracked paths, or undefined when git cannot answer
+ */
+async function trackedPaths(targetPath) {
+    try {
+        const { stdout } = await run("git", ["ls-files", "-z"], {
+            cwd: targetPath,
+            maxBuffer: GIT_MAX_BUFFER_BYTES,
+            timeout: GIT_TIMEOUT_MS,
+        });
+        return stdout.split("\0").filter(entry => entry.length > 0);
+    }
+    catch {
+        return undefined;
+    }
+}
+/**
+ * Read one hook copy and extract what it declares.
+ *
+ * A copy that cannot be read is reported as declaring nothing rather than
+ * dropped: dropping it would let an unreadable copy silently leave the roster,
+ * which is the failure this check exists to prevent.
+ * @param targetPath - Project root
+ * @param relative - Repo-relative path of the copy
+ * @returns The copy and its declared features
+ */
+async function readHookCopy(targetPath, relative) {
+    try {
+        const source = await readFile(path.join(targetPath, relative), "utf8");
+        return { path: relative, features: declaredHookFeatures(source) };
+    }
+    catch {
+        return { path: relative, features: [] };
+    }
+}
+/**
+ * Collect every disagreement between sibling copies of a hook in one checkout.
+ * @param targetPath - Project path to inspect
+ * @param paths - Repo-relative tracked paths
+ * @returns Findings across every hook with more than one copy
+ */
+async function collectFindings(targetPath, paths) {
+    const groups = deriveHookCopyGroups(paths).filter(group => group.paths.length > 1);
+    const perGroup = await Promise.all(groups.map(async (group) => {
+        const copies = await Promise.all(group.paths.map(relative => readHookCopy(targetPath, relative)));
+        return findHookCopyDrift(group.hook, copies);
+    }));
+    return perGroup.flat();
+}
+/**
+ * Report hooks whose tracked copies declare different features.
+ * @param targetPath - Project path to inspect
+ * @returns Doctor check result
+ */
+export async function checkHookCopyParity(targetPath) {
+    const paths = await trackedPaths(targetPath);
+    if (paths === undefined) {
+        return {
+            name: CHECK_NAME,
+            status: "warn",
+            detail: "Could not list tracked files, so sibling hook copies were not compared. " +
+                "This is not a pass — run `lisa doctor` from inside a git checkout",
+        };
+    }
+    const multiCopy = deriveHookCopyGroups(paths).filter(group => group.paths.length > 1);
+    if (multiCopy.length === 0) {
+        return {
+            name: CHECK_NAME,
+            status: "ok",
+            detail: "No hook has more than one tracked copy",
+        };
+    }
+    const findings = await collectFindings(targetPath, paths);
+    if (findings.length === 0) {
+        const copies = multiCopy.reduce((total, group) => total + group.paths.length, 0);
+        return {
+            name: CHECK_NAME,
+            status: "ok",
+            detail: `${copies} tracked copies across ${multiCopy.length} hook(s) declare the same features`,
+        };
+    }
+    const shown = findings
+        .slice(0, MAX_REPORTED_FINDINGS)
+        .map(describeHookCopyFinding);
+    const more = findings.length > MAX_REPORTED_FINDINGS
+        ? ` (+${findings.length - MAX_REPORTED_FINDINGS} more)`
+        : "";
+    return {
+        name: CHECK_NAME,
+        status: "fail",
+        detail: `${findings.length} feature(s) differ between copies of the same hook: ${shown.join("; ")}${more}`,
+    };
+}
+//# sourceMappingURL=doctor-hook-copy-parity.js.map

package/dist/cli/doctor-hook-copy-parity.js.map

@@ -0,0 +1 @@
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package/dist/cli/doctor.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"doctor.d.ts","sourceRoot":"","sources":["../../src/cli/doctor.ts"],"names":[],"mappings":"AAMA,OAAO,EAAE,kBAAkB,EAAE,MAAM,qBAAqB,CAAC;AACzD,OAAO,EAAE,mBAAmB,EAAE,MAAM,8BAA8B,CAAC;AAmBnE,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,wBAAwB,CAAC;AAMzD,OAAO,EAAE,cAAc,EAAE,MAAM,mBAAmB,CAAC;AAEnD,mDAAmD;AACnD,KAAK,YAAY,GAAG,IAAI,GAAG,MAAM,GAAG,MAAM,CAAC;AAO3C,oCAAoC;AACpC,MAAM,WAAW,WAAW;IAC1B,IAAI,EAAE,MAAM,CAAC;IACb,MAAM,EAAE,YAAY,CAAC;IACrB,MAAM,EAAE,MAAM,CAAC;CAChB;AAED,sCAAsC;AACtC,MAAM,WAAW,YAAY;IAC3B,MAAM,EAAE,WAAW,EAAE,CAAC;IACtB;;;;;;;;;;;;OAYG;IACH,UAAU,CAAC,EAAE,UAAU,CAAC;CACzB;AAED,wCAAwC;AACxC,MAAM,WAAW,aAAa;IAC5B,IAAI,CAAC,EAAE,OAAO,CAAC;IACf,OAAO,CAAC,EAAE,OAAO,CAAC;IAClB;;;;OAIG;IACH,SAAS,CAAC,EAAE,OAAO,CAAC;CACrB;AAED,wCAAwC;AACxC,MAAM,WAAW,kBAAkB;IACjC,SAAS,EAAE,OAAO,KAAK,CAAC;IACxB,cAAc,EAAE,OAAO,cAAc,CAAC;IACtC,WAAW,EAAE,CAAC,IAAI,EAAE,MAAM,KAAK,IAAI,CAAC;IACpC,KAAK,EAAE,CAAC,OAAO,EAAE,MAAM,KAAK,IAAI,CAAC;IACjC,kBAAkB,EAAE,OAAO,kBAAkB,CAAC;IAC9C,mBAAmB,EAAE,OAAO,mBAAmB,CAAC;CACjD;AAaD;;;;;;;GAOG;AACH,wBAAsB,YAAY,CAChC,IAAI,EAAE,IAAI,CAAC,kBAAkB,EAAE,gBAAgB,CAAC,EAChD,OAAO,EAAE,OAAO,GACf,OAAO,CAAC,WAAW,CAAC,CAyBtB;AA4MD;;;;;;GAMG;AACH,wBAAsB,SAAS,CAC7B,UAAU,EAAE,MAAM,GAAG,SAAS,EAC9B,OAAO,EAAE,aAAa,EACtB,YAAY,GAAE,OAAO,CAAC,kBAAkB,CAAM,GAC7C,OAAO,CAAC,YAAY,CAAC,CA2EvB"}
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package/dist/cli/doctor.js

@@ -23,6 +23,7 @@ import { checkApplyFailure } from "./doctor-apply-failure.js";
 import { renderDoctorResult } from "./doctor-render.js";
 import { checkSkipJobsMigration } from "./doctor-skip-jobs-migration.js";
 import { checkTraceabilityGate } from "./doctor-traceability-gate.js";
+import { checkHookCopyParity } from "./doctor-hook-copy-parity.js";
 import { checkWorktreeHygiene } from "./doctor-worktree-hygiene.js";
 import { checkWorktreeWorkAtRisk } from "./doctor-worktree-work-at-risk.js";
 import { STARTERS } from "./starters.js";
@@ -306,6 +307,11 @@ export async function runDoctor(targetPath, options, dependencies = {}) {
         // Static answer to a runtime failure that is deliberately silent: an
         // incomplete serialize opt-in warns at 2am on a green job and nowhere else.
         await checkSerializeLegsContract(resolvedTarget),
+        // Sibling copies of one hook inside THIS tree, which the Lisa-owned
+        // artifact check cannot see: its axis is host copy vs shipped package copy
+        // for one destination, so a second copy at another path is outside it by
+        // construction (CodySwannGT/lisa#2847).
+        await checkHookCopyParity(resolvedTarget),
         await checkWorktreeHygiene(resolvedTarget),
         // Immediately after the count check, and deliberately separate from it.
         // Hygiene answers "how many checkouts is every crawler walking past"; this

package/dist/cli/doctor.js.map

@@ -1 +1 @@
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package/dist/core/hook-copy-parity.d.ts

@@ -0,0 +1,81 @@
+/**
+ * Sibling copies of one git hook, derived from the tree rather than written down.
+ *
+ * Three tracked copies of the pre-push hook existed in this repository; every
+ * test that could have caught the third drifting six commits behind was named a
+ * parity test and hardcoded a two-entry roster that omitted it. Each such test
+ * proves parity across the copies it happens to list, so "the copies agree"
+ * silently meant "the copies someone remembered agree" the moment a third copy
+ * appeared (CodySwannGT/lisa#2847).
+ *
+ * The roster here is derived from the set of tracked paths, so a copy added
+ * tomorrow joins every check that consumes it without anyone editing a list.
+ *
+ * The feature axis is the gate ids a hook declares through `lisa_gate_covers`.
+ * That marker is the one machine-readable link between a built-in hook step and
+ * the gate registry entry that can stand it down, so a copy missing an id is a
+ * copy in which that property is either unprovable or ungovernable — the exact
+ * shape the drift took. Comparing whole bytes instead would be useless: sibling
+ * copies legitimately differ (Lisa's own hook is not its shipped template), so a
+ * byte check would be permanently red and would prove nothing about behaviour.
+ * @module core/hook-copy-parity
+ */
+/** One tracked copy of a hook, with the features it declares. */
+export interface HookCopy {
+    /** Repo-relative path of this copy. */
+    readonly path: string;
+    /** Features this copy declares, sorted. */
+    readonly features: readonly string[];
+}
+/** Every tracked copy of one hook name. */
+export interface HookCopyGroup {
+    /** The hook's file name, e.g. `pre-push`. */
+    readonly hook: string;
+    /** Repo-relative paths of every tracked copy, sorted. */
+    readonly paths: readonly string[];
+}
+/** A feature some copies of a hook declare and others do not. */
+export interface HookCopyFinding {
+    /** The hook name the disagreeing copies share. */
+    readonly hook: string;
+    /** The feature that is present in one copy and absent from another. */
+    readonly feature: string;
+    /** Copies that declare the feature, sorted. */
+    readonly present: readonly string[];
+    /** Copies that do not, sorted. */
+    readonly absent: readonly string[];
+}
+/**
+ * Group tracked paths into the hooks they are copies of.
+ *
+ * Identity is the file name under `.husky/`: `.husky/pre-push` and
+ * `any/prefix/.husky/pre-push` are two copies of one logical hook. Paths that
+ * are not hooks are ignored, and a hook with a single copy still gets a group —
+ * callers decide what a one-copy group means.
+ * @param trackedPaths - Repo-relative paths of every tracked file
+ * @returns One group per hook name, sorted by hook name
+ */
+export declare function deriveHookCopyGroups(trackedPaths: readonly string[]): readonly HookCopyGroup[];
+/**
+ * The features one hook's source declares.
+ * @param source - Full text of the hook
+ * @returns Declared feature ids, sorted and de-duplicated
+ */
+export declare function declaredHookFeatures(source: string): readonly string[];
+/**
+ * Report every feature that sibling copies of one hook disagree about.
+ *
+ * A hook with fewer than two copies can never disagree, and a feature no copy
+ * declares is not a feature, so both cases produce nothing.
+ * @param hook - The hook name these copies share
+ * @param copies - Every tracked copy of that hook
+ * @returns One finding per disputed feature, sorted by feature
+ */
+export declare function findHookCopyDrift(hook: string, copies: readonly HookCopy[]): readonly HookCopyFinding[];
+/**
+ * One operator-readable line per finding.
+ * @param finding - A disputed feature
+ * @returns A sentence naming the feature and both sides
+ */
+export declare function describeHookCopyFinding(finding: HookCopyFinding): string;
+//# sourceMappingURL=hook-copy-parity.d.ts.map

package/dist/core/hook-copy-parity.d.ts.map

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package/dist/core/hook-copy-parity.js

@@ -0,0 +1,111 @@
+/**
+ * Sibling copies of one git hook, derived from the tree rather than written down.
+ *
+ * Three tracked copies of the pre-push hook existed in this repository; every
+ * test that could have caught the third drifting six commits behind was named a
+ * parity test and hardcoded a two-entry roster that omitted it. Each such test
+ * proves parity across the copies it happens to list, so "the copies agree"
+ * silently meant "the copies someone remembered agree" the moment a third copy
+ * appeared (CodySwannGT/lisa#2847).
+ *
+ * The roster here is derived from the set of tracked paths, so a copy added
+ * tomorrow joins every check that consumes it without anyone editing a list.
+ *
+ * The feature axis is the gate ids a hook declares through `lisa_gate_covers`.
+ * That marker is the one machine-readable link between a built-in hook step and
+ * the gate registry entry that can stand it down, so a copy missing an id is a
+ * copy in which that property is either unprovable or ungovernable — the exact
+ * shape the drift took. Comparing whole bytes instead would be useless: sibling
+ * copies legitimately differ (Lisa's own hook is not its shipped template), so a
+ * byte check would be permanently red and would prove nothing about behaviour.
+ * @module core/hook-copy-parity
+ */
+/** Matches any tracked path that is a file directly inside a `.husky` directory. */
+const HUSKY_HOOK = /(?:^|\/)\.husky\/([^/]+)$/u;
+/**
+ * Matches a `lisa_gate_covers` call and captures its arguments.
+ *
+ * Anchored at the start of a shell word so the helper's own definition
+ * (`lisa_gate_covers() {`) and its body never register as declarations — only a
+ * call site passing at least one gate id does.
+ */
+const GATE_COVERS = /(?:^|\s)lisa_gate_covers((?:[ \t]+[A-Za-z0-9][\w-]*)+)/gmu;
+/**
+ * Alphabetical order that does not depend on the ambient locale's default.
+ * @param left - First name
+ * @param right - Second name
+ * @returns Negative, zero, or positive per `String.localeCompare`
+ */
+const byName = (left, right) => left.localeCompare(right);
+/**
+ * Group tracked paths into the hooks they are copies of.
+ *
+ * Identity is the file name under `.husky/`: `.husky/pre-push` and
+ * `any/prefix/.husky/pre-push` are two copies of one logical hook. Paths that
+ * are not hooks are ignored, and a hook with a single copy still gets a group —
+ * callers decide what a one-copy group means.
+ * @param trackedPaths - Repo-relative paths of every tracked file
+ * @returns One group per hook name, sorted by hook name
+ */
+export function deriveHookCopyGroups(trackedPaths) {
+    const located = trackedPaths.flatMap(trackedPath => {
+        const hook = HUSKY_HOOK.exec(trackedPath)?.[1];
+        return hook === undefined ? [] : [{ hook, path: trackedPath }];
+    });
+    return [...new Set(located.map(entry => entry.hook))]
+        .sort(byName)
+        .map(hook => ({
+        hook,
+        paths: located
+            .filter(entry => entry.hook === hook)
+            .map(entry => entry.path)
+            .sort(byName),
+    }));
+}
+/**
+ * The features one hook's source declares.
+ * @param source - Full text of the hook
+ * @returns Declared feature ids, sorted and de-duplicated
+ */
+export function declaredHookFeatures(source) {
+    const declared = [...source.matchAll(GATE_COVERS)].flatMap(match => (match[1] ?? "")
+        .trim()
+        .split(/[ \t]+/u)
+        .map(id => `gate:${id}`));
+    return [...new Set(declared)].sort(byName);
+}
+/**
+ * Report every feature that sibling copies of one hook disagree about.
+ *
+ * A hook with fewer than two copies can never disagree, and a feature no copy
+ * declares is not a feature, so both cases produce nothing.
+ * @param hook - The hook name these copies share
+ * @param copies - Every tracked copy of that hook
+ * @returns One finding per disputed feature, sorted by feature
+ */
+export function findHookCopyDrift(hook, copies) {
+    if (copies.length < 2)
+        return [];
+    const union = [...new Set(copies.flatMap(copy => [...copy.features]))].sort(byName);
+    return union.flatMap(feature => {
+        const present = copies
+            .filter(copy => copy.features.includes(feature))
+            .map(copy => copy.path)
+            .sort(byName);
+        const absent = copies
+            .filter(copy => !copy.features.includes(feature))
+            .map(copy => copy.path)
+            .sort(byName);
+        return absent.length === 0 ? [] : [{ hook, feature, present, absent }];
+    });
+}
+/**
+ * One operator-readable line per finding.
+ * @param finding - A disputed feature
+ * @returns A sentence naming the feature and both sides
+ */
+export function describeHookCopyFinding(finding) {
+    return (`${finding.hook}: ${finding.feature} is declared by ` +
+        `${finding.present.join(", ")} but absent from ${finding.absent.join(", ")}`);
+}
+//# sourceMappingURL=hook-copy-parity.js.map

package/dist/core/hook-copy-parity.js.map

@@ -0,0 +1 @@
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package/dist/core/upstream-evidence-manifest.d.ts.map

@@ -1 +1 @@
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package/dist/core/upstream-evidence-manifest.js

@@ -1068,7 +1068,7 @@ export const UPSTREAM_EVIDENCE_MANIFEST = Object.freeze({
     "scripts/build-plugins.sh": "00a3207bb5a485bfee80fb71be6e9577979fd156b15a85517e88a2f9261bc9f4",
     "scripts/check-conflict-markers.mjs": "3a2ab8dde9deab3e8ee750d5678b6653751abad2eb8f961500585ba38f502047",
     "scripts/check-delivery-deletion-conflicts.mjs": "e7fe0064ad82a4dba17436657630a46891568a3d18930eb172fe9ee3f54196aa",
-    "scripts/check-derived-artifacts.mjs": "62c895baffad41c25fa919b798a53e2e969163897bcbb09b0e26345c61f61320",
+    "scripts/check-derived-artifacts.mjs": "86cca46aa7f055ae149b5a378d56d2c4e5dbbbe48e020b79883e21cae50c5956",
     "scripts/check-duplicate-versions.mjs": "26b26351dd2735dfd8d9a2436b89e876ce2ed93871d0b264f611215dd03d70ae",
     "scripts/check-learnings-budget.ts": "007430c2d6938efcc79ccbfd5717ebe2c7cf66b4de9a21a3e67b8db7f3600349",
     "scripts/check-plugins-sync.sh": "3a99cbff0e8ec5e7c944690eae003a6d51b51c85436d77bd37faea4d553728af",
@@ -1094,7 +1094,7 @@ export const UPSTREAM_EVIDENCE_MANIFEST = Object.freeze({
     "scripts/generate-copilot-plugin-artifacts.mjs": "7af923118c49101e6ba46da73a8eee8aee9b797e074618aa5345913e638d7cdb",
     "scripts/generate-cursor-plugin-artifacts.mjs": "45d3bde7b6c55310f0d9436dd68a1bdeefb6fa817be4d15ef745421b39a2cf47",
     "scripts/generate-lisa-owned-hash-ledger.mjs": "4e7a6dd9325fff77faec49c1dcbf8a8cfeb987052eeed89885deb4f7b0a107bc",
-    "scripts/generate-upstream-evidence-manifest.mjs": "005ff3ef61e63aab9ed466a3e545df5e8f46e369fdcff94b6e7723161148bc82",
+    "scripts/generate-upstream-evidence-manifest.mjs": "a33bd0ee344782a9b2f400f5adfeecd9e7e201b61b073a9e85cc69311b8721e0",
     "scripts/github-status-check.sh": "c6a4a13ff5cf689fcbd7a6aca718f9e7d46d54ccb6687f662b055c1ca20e792f",
     "scripts/install-claude-plugins.sh": "0e96ebbae1e59304bb432286eccba38900a6008b80f2c53a1ec2c95801d4087c",
     "scripts/internal-agy-skill-policy.json": "c2ce87d2eeebfdc9f24d6486425c010cf9289376f8a459f4767ca22d2bf8670d",
@@ -1108,6 +1108,7 @@ export const UPSTREAM_EVIDENCE_MANIFEST = Object.freeze({
     "scripts/lib/per-agent-hook-filter.mjs": "04ea61ea616614fb545024f98ab27fb08af3f0331da06bb60943d6262e264000",
     "scripts/lib/reusable-workflow-contract.d.mts": "791f01b55dd7a6b5d9a5f4cb9c44167caa146c2fc3c31a2ae4c2d8a350adc2f1",
     "scripts/lib/reusable-workflow-contract.mjs": "134ee2a327290f066f1eb318b5ed53c711557c3e10ed462c00ff5c97cfb20863",
+    "scripts/lib/upstream-manifest-staleness.mjs": "c69fc5ba10228b7f4f8d0068db27ee8a289143094fa8718b14af83f4af31f76d",
     "scripts/lisa-assert-eas-profile.mjs": "624e40d7f33ca17208fc6b7a19320a785cff19da5d2ff8062b67a432b2a34022",
     "scripts/lisa-commit-and-pr-local.sh": "605409c3ce6ec38ad3275604291a1ceae98f7807a605654263bc14f811c03903",
     "scripts/lisa-commit-msg-gates.mjs": "f961cb70a525e7b0a94b8ca7a76d1e2bb5b1929d5477417e159dbf58312ce0d8",
@@ -1211,6 +1212,7 @@ export const UPSTREAM_EVIDENCE_MANIFEST = Object.freeze({
 /** Exact paths tracked by the public Lisa repository at generation time. */
 export const UPSTREAM_SURFACE_MANIFEST = Object.freeze({
     ".agents/rules/never-name-downstream-projects.md": true,
+    ".agents/rules/regenerating-derived-artifacts.md": true,
     ".agents/skills/claude-code-action/SKILL.md": true,
     ".agents/skills/claude-code-action/references/inputs.md": true,
     ".agents/skills/harness-parity-council/SKILL.md": true,
@@ -7068,6 +7070,7 @@ export const UPSTREAM_SURFACE_MANIFEST = Object.freeze({
     "scripts/lib/per-agent-hook-filter.mjs": true,
     "scripts/lib/reusable-workflow-contract.d.mts": true,
     "scripts/lib/reusable-workflow-contract.mjs": true,
+    "scripts/lib/upstream-manifest-staleness.mjs": true,
     "scripts/lisa-assert-eas-profile.mjs": true,
     "scripts/lisa-commit-and-pr-local.sh": true,
     "scripts/lisa-commit-msg-gates.mjs": true,
@@ -7108,6 +7111,7 @@ export const UPSTREAM_SURFACE_MANIFEST = Object.freeze({
     "src/cli/doctor-apply-failure.ts": true,
     "src/cli/doctor-apply-freshness.ts": true,
     "src/cli/doctor-gate-recommendation.ts": true,
+    "src/cli/doctor-hook-copy-parity.ts": true,
     "src/cli/doctor-kane.ts": true,
     "src/cli/doctor-learnings-ledger.ts": true,
     "src/cli/doctor-learnings-merge-driver.ts": true,
@@ -7285,6 +7289,7 @@ export const UPSTREAM_SURFACE_MANIFEST = Object.freeze({
     "src/core/downstream-references.ts": true,
     "src/core/git-service.ts": true,
     "src/core/guard-capabilities.ts": true,
+    "src/core/hook-copy-parity.ts": true,
     "src/core/host-rules-pointer.ts": true,
     "src/core/index.ts": true,
     "src/core/instruction-files-migration.ts": true,
@@ -7544,8 +7549,10 @@ export const UPSTREAM_SURFACE_MANIFEST = Object.freeze({
     "tests/fixtures/verification/v2_structurally_invalid_claims.json": true,
     "tests/fixtures/wiki-safety/allowed-contacts.md": true,
     "tests/fixtures/wiki-safety/redaction-source.md": true,
+    "tests/helpers/__fixtures__/margin-guard-case.ts": true,
     "tests/helpers/__fixtures__/wiki-status-fixture.ts": true,
     "tests/helpers/cpu-budget.ts": true,
+    "tests/helpers/hook-roster.ts": true,
     "tests/helpers/io-latency-budget.ts": true,
     "tests/helpers/nightly-e2e-gate-harness.ts": true,
     "tests/helpers/nightly-e2e-reporting-harness.ts": true,
@@ -7625,6 +7632,7 @@ export const UPSTREAM_SURFACE_MANIFEST = Object.freeze({
     "tests/integration/support/reusable-workflow-scopes.ts": true,
     "tests/integration/threshold-ratchet-gate-fail-closed.test.ts": true,
     "tests/integration/tracked-source-nul-bytes.test.ts": true,
+    "tests/support/git-executable.ts": true,
     "tests/support/work-item-cli.ts": true,
     "tests/unit/agy/block-no-verify-agy.test.ts": true,
     "tests/unit/agy/mcp-collect.test.ts": true,
@@ -7636,6 +7644,7 @@ export const UPSTREAM_SURFACE_MANIFEST = Object.freeze({
     "tests/unit/cli/doctor-apply-failure.test.ts": true,
     "tests/unit/cli/doctor-apply-freshness.test.ts": true,
     "tests/unit/cli/doctor-gate-recommendation.test.ts": true,
+    "tests/unit/cli/doctor-hook-copy-parity.test.ts": true,
     "tests/unit/cli/doctor-kane.test.ts": true,
     "tests/unit/cli/doctor-learnings-ledger.test.ts": true,
     "tests/unit/cli/doctor-learnings-merge-driver.test.ts": true,
@@ -7825,6 +7834,7 @@ export const UPSTREAM_SURFACE_MANIFEST = Object.freeze({
     "tests/unit/core/bootstrap-environment.test.ts": true,
     "tests/unit/core/fs-extra-namespace-callsites.test.ts": true,
     "tests/unit/core/fs-extra-namespace-members.test.ts": true,
+    "tests/unit/core/hook-copy-parity.test.ts": true,
     "tests/unit/core/host-rules-parity.test.ts": true,
     "tests/unit/core/host-rules-pointer.test.ts": true,
     "tests/unit/core/instruction-files-migration.test.ts": true,
@@ -7887,6 +7897,7 @@ export const UPSTREAM_SURFACE_MANIFEST = Object.freeze({
     "tests/unit/health/gitignore.test.ts": true,
     "tests/unit/health/package-surfaces.test.ts": true,
     "tests/unit/health/storage.test.ts": true,
+    "tests/unit/helpers/io-latency-budget.test.ts": true,
     "tests/unit/hooks/block-direct-issue-create-bypasses.test.ts": true,
     "tests/unit/hooks/block-direct-issue-create-declarations.test.ts": true,
     "tests/unit/hooks/block-direct-issue-create-missing-interpreter.test.ts": true,
@@ -8088,6 +8099,7 @@ export const UPSTREAM_SURFACE_MANIFEST = Object.freeze({
     "tests/unit/scripts/threshold-ratchet-wiring.test.ts": true,
     "tests/unit/scripts/threshold-ratchet.test.ts": true,
     "tests/unit/scripts/upstream-evidence-manifest.test.ts": true,
+    "tests/unit/scripts/upstream-manifest-staleness.test.ts": true,
     "tests/unit/scripts/vacuous-required-checks.test.ts": true,
     "tests/unit/scripts/verification-coverage.test.ts": true,
     "tests/unit/scripts/work-item-backlink-exactness.test.ts": true,